Pregenerated sensors for QPRT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030674Ensembl transcript IDs: ENSMUST00000032912.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTTCACGGCCAGCCTAGGCTACATGGTGAGGCAGAGCAGGAATaGGGGAGACAGGAAAGAAGGGAGAAGGGAGAGAAGAGAGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: EVHGQPRLHGEAEQE*GRQERREKGEKREG Trigger: GCCCTCTCTCTTCTCTCCCTTCTCCCTTCTTTCCTGTCTCCCCCATTCCTGCTCTGCCTCACCATGTAGCCTAGGCTGGCCGTGAACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR GCA 90 bp | GTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTTaGCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCT | + |
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Preference number: 1 (lower is better) Translates to: VSLATQIGHVMSAAS*QSLTLKHHLLKGPP Trigger: AGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR GCA 90 bp | TTGCCATGTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTaGCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPCVPSHTDRPCDVS*QLPESYFETPSAKG Trigger: CCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGACACATGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CCA 90 bp | ACAACAAAGAAGTGCCACGCATTTCTAATGTCTTATTACTACTCATaGCTTCTAGTGTACATGTGTGGAAAGAGTTGTTGTAAGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: TTKKCHAFLMSYYYS*LLVYMCGKSCCKPG Trigger: ACCTGGCTTACAACAACTCTTTCCACACATGTACACTAGAAGCCATGAGTAGTAATAAGACATTAGAAATGCGTGGCACTTCTTTGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 90 bp | TGTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTaGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: CVPSHTDRPCDVSCQ*PESYFETPSAKGAT Trigger: GGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 90 bp | CAGAGACAGAAAAGAGCACTTGGGGCTGTGCTAGCAGCTTGTTTCTaGCCATGTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QRQKRALGAVLAACF*PCVPSHTDRPCDVS Trigger: GCTGACATCACATGGCCTATCTGTGTGGCTAGGGACACATGGCAAGAAACAAGCTGCTAGCACAGCCCCAAGTGCTCTTTTCTGTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR-3UTR GCA 90 bp | TCCATGGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCACTTGGGCCATGTGATGTCAGCTaGCAGTTGCCAGAGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: SMALAPSLTPQRQKRALGPCDVS*QLPESY Trigger: GTAAGACTCTGGCAACTGGCAGCTGACATCACATGG...CCCAAGTGCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTAATCAAAGTCAGCCCTaGCAAGTCACACAAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CQLPESYFETPSAKGATSNQSQP*QVTQAG Trigger: TCCAGCTTGTGTGACTTGCCAGGGCTGACTTTGATT...AGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTCTAGATATGTCCTATTaGCCTCTGAATCTAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: CQLPESYFETPSAKGATSLDMSY*PLNLKT Trigger: TGTCTTTAGATTCAGAGGCCAATAGGACATATCTAG...AGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 90 bp | ACTCATTGTGTAGTAGTTATTATCATCAACAGCCCAGTAAGGCTGTaGATTTTATTTATTAGACCTATTTCACAGATGAGAAAACCGAGG | + |
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Preference number: 2 (lower is better) Translates to: THCVVVIIINSPVRL*ILFIRPISQMRKPR Trigger: CCTCGGTTTTCTCATCTGTGAAATAGGTCTAATAAATAAAATCAACAGCCTTACTGGGCTGTTGATGATAATAACTACTACACAATGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR TCA 72 bp | AGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTaGGTTCCAGGACAACCAGGGCTATACAGACAAACC | + |
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Preference number: 3 (lower is better) Translates to: RFLSSRPAWSTE*VPGQPGLYRQT Trigger: GGTTTGTCTGTATAGCCCTGGTTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR GCA 72 bp | GTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTaGCAGTTGCCAGAGTCTTACTTTGAAACACCATCT | + |
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Preference number: 3 (lower is better) Translates to: VPSHTDRPCDVS*QLPESYFETPS Trigger: AGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR GCA 72 bp | GCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTTaGCAGAGTCTTACTTTGAAACACCATCTGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: ATQIGHVMSAAS*QSLTLKHHLLK Trigger: CTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR-3UTR CAA 90 bp | GAGACAGAAAAGAGCACTTGGGGCTGTGCTAGCAGCTTGTTTCTTGCCATGTGTTGCCAGAGTCTTACTTaGAAACACCATCTGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: ETEKSTWGCASSLFLAMCCQSLT*KHHLLK Trigger: CTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCA...ACACATGGCAAGAAACAAGCTGCTAGCACAGCCCCAAGTGCTCTTTTCTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CCA 72 bp | AAGTGCCACGCATTTCTAATGTCTTATTACTACTCATaGCTTCTAGTGTACATGTGTGGAAAGAGTTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: KCHAFLMSYYYS*LLVYMCGKSCC Trigger: ACAACAACTCTTTCCACACATGTACACTAGAAGCCATGAGTAGTAATAAGACATTAGAAATGCGTGGCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | GGCAAGCAAAATCAAAGTCAGCCCTGGCAAGTCACACAAGCTGGAGATGGCAGAAGCCCCAGCCTCTGCTaGCCGAAAGGCCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GKQNQSQPWQVTQAGDGRSPSLC*PKGLLQ Trigger: CTGGAGGAGGCCTTTCGGGCAGCAGAGGCTGGGGCT...TCTGCCATCTCCAGCTTGTGTGACTTGCCAGGGCTGACTTTGATTTTGCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | GGCAAGCAAAATCAAAGTCAGCCCTGGCAAGTCACACAAGCTGGAGATGGCAGATCCAGCCGGTGCTCCTaGCCACCTCCACAGCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: GKQNQSQPWQVTQAGDGRSSRCS*PPPQLS Trigger: CGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGGA...TCTGCCATCTCCAGCTTGTGTGACTTGCCAGGGCTGACTTTGATTTTGCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 72 bp | GAAGAGAGAGGGCTGAGGTCAGCAGCGCTAGGACACTaGTCCATGGCCCTGGCTCCATCCTTAACACCACAG | + |
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Preference number: 4 (lower is better) Translates to: EERGLRSAALGH*SMALAPSLTPQ Trigger: CTGTGGTGTTAAGGATGGAGCCAGGGCCATGGACAAGTGTCCTAGCGCTGCTGACCTCAGCCCTCTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | GGCAAGCAAAATCAAAGTCAGCCCTGGCAAGTCACACAAGCTGGAGATGGCAGAGCACTGCCCTTTCCATaGTGCCGGCCGCCACTACAT | + |
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Preference number: 4 (lower is better) Translates to: GKQNQSQPWQVTQAGDGRALPFP*CRPPLH Trigger: ATGTAGTGGCGGCCGGCAGCATGGAAAGGGCAGTGC...TCTGCCATCTCCAGCTTGTGTGACTTGCCAGGGCTGACTTTGATTTTGCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTTCCCCCAAGAGCAGGTaGTGGGCAGGTCCCTTGACC | + |
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Preference number: 4 (lower is better) Translates to: CQLPESYFETPSAKGATSSPKSR*WAGPLT Trigger: GGTCAAGGGACCTGCCCACCACCTGCTCTTGGGGGA...AGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | GTCAGCTGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCAGGGCTGGAGCAGCCTaGGTCAGCATTCCCAACGAG | + |
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Preference number: 4 (lower is better) Translates to: VSCQLPESYFETPSAKGARAGAA*VSIPNE Trigger: CTCGTTGGGAATGCTGACCCAGGCTGCTCCAGCCCT...GGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR TCA 90 bp | CCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTTGCCAGAGTCTTACCCAAGGATGCAAAATTaGGGCCCGGGCAGTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSHTDRPCDVSCQLPESYPRMQN*GPGSPL Trigger: AAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGG...GTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | TTCTTGCCATGTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGAGGCCTCCTCCAGGCTaGTACATTCCACCTCTACCT | + |
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Preference number: 4 (lower is better) Translates to: FLPCVPSHTDRPCDVSCQRPPPG*YIPPLP Trigger: AGGTAGAGGTGGAATGTAGCAGCCTGGAGGAGGCCT...CTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGACACATGGCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | TGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTGCTGCCCCGCCTACTTaGAGCCCATACTTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CQLPESYFETPSAKGATSAAPPT*SPYFST Trigger: GGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGC...AGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | ACACTTGTCCATGGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCAGGTCCCTTGACCTCTaGCACCTTGACCACAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TLVHGPGSILNTTETEKSRSLDL*HLDHRY Trigger: GTACCTGTGGTCAAGGTGGCAGAGGTCAAGGGACCT...GCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCCATGGACAAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | TTCCAGGACAACCAGGGCTATACAGACAAACCCTGTCTCGAAAAACAACAACAAGTCCAGTCCAGCCGGTaGTCCTGGCCACCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: FQDNQGYTDKPCLEKQQQVQSSR*SWPPPQ Trigger: CTGTGGAGGTGGCCAGGAGCACCGGCTGGACTGGAC...TTGTTGTTGTTTTTCGAGACAGGGTTTGTCTGTATAGCCCTGGTTGTCCTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | GTCAGCTGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCCCGGCCGCCACTACATaGTTGTCTTTCACCATCACC | + |
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Preference number: 4 (lower is better) Translates to: VSCQLPESYFETPSAKGAPAATT*LSFTIT Trigger: GGTGATGGTGAAAGACAACCATGTAGTGGCGGCCGG...GGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR TCA 90 bp | GGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCACTTGGGGCTGTACTTGGCAGTTGAGTTaGGTGAAGATGGCGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GPGSILNTTETEKSTWGCTWQLS*VKMASK Trigger: CTTTGACGCCATCTTCACTCAACTCAACTGCCAAGT...ACAGCCCCAAGTGCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | CAGACAAACCCTGTCTCGAAAAACAACAACAACAACAACAAAGAAGTGCCACGCGTGTCGTCTTCCTCGTaGCCGCCACGTGTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QTNPVSKNNNNNNKEVPRVSSSS*PPRVQS Trigger: GGACTGGACACGTGGCGGGCACGAGGAAGACGACAC...GCGTGGCACTTCTTTGTTGTTGTTGTTGTTGTTTTTCGAGACAGGGTTTGTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CCA 90 bp | AGTGAGTTCCAGGACAACCAGGGCTATACAGACAAACCCTGTCTCGAAAAACAACCCAAGAGCAGGTGGTaGGCAGGTCCCTTGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SEFQDNQGYTDKPCLEKQPKSRW*AGPLTS Trigger: AGAGGTCAAGGGACCTGCCCACCACCTGCTCTTGGG...TTGTTTTTCGAGACAGGGTTTGTCTGTATAGCCCTGGTTGTCCTGGAACTCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR GCA 90 bp | CACACAGATAGGCCATGTGATGTCAGCTGCCAGTTGCCAGAGTCTTACTTTGAACCCGGTAACCAAGGATaGAAAATTGAGGCCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HTDRPCDVSCQLPESYFEPGNQG*KIEARA Trigger: TGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGG...TTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 72 bp | CATGTGATGTCAGCTGCCAGTTGCCAGAGTCTTACTTaGAAACACCATCTGCTAAAGGGGCCACCTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: HVMSAASCQSLT*KHHLLKGPPLQ Trigger: CTGGAGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 72 bp | AAAAGAGCACTTGGGGCTGTGCTAGCAGCTTGTTTCTaGCCATGTGTCCCTAGCCACACAGATAGGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: KRALGAVLAACF*PCVPSHTDRPC Trigger: ACATGGCCTATCTGTGTGGCTAGGGACACATGGCAAGAAACAAGCTGCTAGCACAGCCCCAAGTGCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR TCA 90 bp | ACACTTGTCCATGGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCCTTCAGCAAACAGTTTaGGGGAAAAATCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLVHGPGSILNTTETEKSLQQTV*GKNPGL Trigger: CAGCCCTGGATTTTTCCCTCAAACTGTTTGCTGAAG...GCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCCATGGACAAGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| 3UTR CAA 72 bp | AGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTaGCCAGAGTCTTACTTTGAAACACCATCTGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SHTDRPCDVSCQ*PESYFETPSAK Trigger: TTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | CAGGTGTCGTCTTCCTCGTGCCCGCCACGTGTCCAGTCCAGCCGGTaGTCCTGGCCACCTCCACAGCTGTCGCTGCCGCGCTGGCAATCC | + |
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Preference number: 5 (lower is better) Translates to: QVSSSSCPPRVQSSR*SWPPPQLSLPRWQS Trigger: GGATTGCCAGCGCGGCAGCGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGGACTGGACACGTGGCGGGCACGAGGAAGACGACACCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 90 bp | TCGTCTTCCTCGTGCCCGCCACGTGTCCAGTCCAGCCGGTGCTCCTaGCCACCTCCACAGCTGTCGCTGCCGCGCTGGCAATCCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: SSSSCPPRVQSSRCS*PPPQLSLPRWQSHC Trigger: GCAGTGGGATTGCCAGCGCGGCAGCGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGGACTGGACACGTGGCGGGCACGAGGAAGACGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | GGCCCACAGCACAGCCTGCGAGGGTGCCGACCCGGTAACCAAGGATaGAAAATTGAGGCCCGGGCAGTCCTCTTGCAGCCAGCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: GPQHSLRGCRPGNQG*KIEARAVLLQPAVR Trigger: GCGAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGGTCGGCACCCTCGCAGGCTGTGCTGTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | GTCTTTCACCATCACCATCCCTCCCAGGTCGTAGCGGTGGCATGCTaGCCCGCCTACTTGGAGCCCATACTTCTCCACCAGTCGGAACCC | + |
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Preference number: 5 (lower is better) Translates to: VFHHHHPSQVVAVAC*PAYLEPILLHQSEP Trigger: GGGTTCCGACTGGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGAGGGATGGTGATGGTGAAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | GGGAAAACCCGGCTGCCTGCCGAGCCTTCAGCACTGCCCTTTCCATaGTGCCGGCCGCCACTACATGGTTGTCTTTCACCATCACCATCC | + |
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Preference number: 5 (lower is better) Translates to: GKTRLPAEPSALPFP*CRPPLHGCLSPSPS Trigger: GGATGGTGATGGTGAAAGACAACCATGTAGTGGCGGCCGGCAGCATGGAAAGGGCAGTGCTGAAGGCTCGGCAGGCAGCCGGGTTTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | GACCCGGTAACCAAGGATGCAAAATTGAGGCCCGGGCAGTCCTCTTaGAGCCAGCTGTTCGCCAGGGCTGCCAAGGTTGTAGGGGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: DPVTKDAKLRPGQSS*SQLFARAAKVVGGN Trigger: GTTACCCCCTACAACCTTGGCAGCCCTGGCGAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | AAAACCCGGCTGCCTGCCGAGCCTTCAGCACTGCCCTTTCCATGCTaGCGGCCGCCACTACATGGTTGTCTTTCACCATCACCATCCCTC | + |
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Preference number: 5 (lower is better) Translates to: KTRLPAEPSALPFPC*RPPLHGCLSPSPSL Trigger: GAGGGATGGTGATGGTGAAAGACAACCATGTAGTGGCGGCCGGCAGCATGGAAAGGGCAGTGCTGAAGGCTCGGCAGGCAGCCGGGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | GTTGTCTTTCACCATCACCATCCCTCCCAGGTCGTAGCGGTGGCATaGTGCCCCGCCTACTTGGAGCCCATACTTCTCCACCAGTCGGAA | + |
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Preference number: 5 (lower is better) Translates to: VVFHHHHPSQVVAVA*CPAYLEPILLHQSE Trigger: TTCCGACTGGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGAGGGATGGTGATGGTGAAAGACAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS TCA 90 bp | AGCTTCGATCCCTCCGGGAGGAACCAGGACACTTGGCAGTTGAGTTaGGTGAAGATGGCGTCAAAGAAGGGTCGCCCTGCCAGAACCCCA | + |
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Preference number: 5 (lower is better) Translates to: SFDPSGRNQDTWQLS*VKMASKKGRPARTP Trigger: TGGGGTTCTGGCAGGGCGACCCTTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGGATCGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 90 bp | GTCAGCATTCCCAACGAGATGACGTCAATGTGTGTCCCACAGAACTaGGTGAGGTTGTCCAGTGTGACGCCCCCACTGGCTTCCACCGAC | + |
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Preference number: 5 (lower is better) Translates to: VSIPNEMTSMCVPQN*VRLSSVTPPLASTD Trigger: GTCGGTGGAAGCCAGTGGGGGCGTCACACTGGACAACCTCACCCAGTTCTGTGGGACACACATTGACGTCATCTCGTTGGGAATGCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | CCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTCCAGAAGGTGCCCGGGCAGTCCTCTaGCAGCCAGCTGTTCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PESYFETPSAKGATSPEGARAVL*QPAVRQ Trigger: CTGGCGAACAGCTGGCTGCAAGAGGACTGCCCGGGC...ACCTTCTGGAGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | GTCAGCTGCCAGTTGCCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCTGGTGGGCAGGTCCCTaGACCTCTGCCACCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: VSCQLPESYFETPSAKGAWWAGP*TSATLT Trigger: GGTCAAGGTGGCAGAGGTCAAGGGACCTGCCCACCA...GGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGGCAACTGGCAGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | TTCTTGCCATGTGTCCCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTGCTGCCCCGCCTACTaGGAGCCCATACTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FLPCVPSHTDRPCDVSCQCCPAY*EPILLH Trigger: GTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCA...CTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGGGACACATGGCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | ACCGACACGCTGGGGAATCTGGCTTTAAGTGTAGCTGCTGTGGGGTaGAGCTCCTCAGGCTTAAAGTTGTCCAGCATTACCAGGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: TDTLGNLALSVAAVG*SSSGLKLSSITRSA Trigger: GGCTGACCTGGTAATGCTGGACAACTTTAAGCCTGAGGAGCTGCACCCCACAGCAGCTACACTTAAAGCCAGATTCCCCAGCGTGTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 90 bp | ACTGGCTTCCACCGACACGCTGGGGAATCTGGCTTTAAGTGTAGCTaGTGTGGGGTGCAGCTCCTCAGGCTTAAAGTTGTCCAGCATTAC | + |
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Preference number: 5 (lower is better) Translates to: TGFHRHAGESGFKCS*CGVQLLRLKVVQHY Trigger: GTAATGCTGGACAACTTTAAGCCTGAGGAGCTGCACCCCACAGCAGCTACACTTAAAGCCAGATTCCCCAGCGTGTCGGTGGAAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | CCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTCCAGAAGGTCAGAACTGGGTGAGGTaGTCCAGTGTGACGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: PESYFETPSAKGATSPEGQNWVR*SSVTPP Trigger: TGGGGGCGTCACACTGGACAACCTCACCCAGTTCTG...ACCTTCTGGAGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 90 bp | CCTTCAGCAAACAGTTTGAGGGAAAAATCCAGGGCTGGAGCAGCCTaGGTCAGCATTCCCAACGAGATGACGTCAATGTGTGTCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: PSANSLREKSRAGAA*VSIPNEMTSMCVPQ Trigger: CTGTGGGACACACATTGACGTCATCTCGTTGGGAATGCTGACCCAGGCTGCTCCAGCCCTGGATTTTTCCCTCAAACTGTTTGCTGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 90 bp | TGGGGTATCTCCTTCAGCAAACAGTTTGAGGGAAAAATCCAGGGCTaGAGCAGCCTGGGTCAGCATTCCCAACGAGATGACGTCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: WGISFSKQFEGKIQG*SSLGQHSQRDDVNV Trigger: CACATTGACGTCATCTCGTTGGGAATGCTGACCCAGGCTGCTCCAGCCCTGGATTTTTCCCTCAAACTGTTTGCTGAAGGAGATACCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | CCAGAGTCTTACTTTGAAACACCATCTGCTAAAGGGGCCACCTCTCCAGAAGGTACCAAGGATGCAAAATaGAGGCCCGGGCAGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PESYFETPSAKGATSPEGTKDAK*RPGQSS Trigger: AGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGT...ACCTTCTGGAGAGGTGGCCCCTTTAGCAGATGGTGTTTCAAAGTAAGACTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | GAAAACCGAGGCAAGCAAAATCAAAGTCAGCCCTGGCAAGTCACACAAGCTGGATTGACCTCTGCCACCTaGACCACAGGTACCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ENRGKQNQSQPWQVTQAGLTSAT*TTGTSF Trigger: GAAGCTGGTACCTGTGGTCAAGGTGGCAGAGGTCAA...TCCAGCTTGTGTGACTTGCCAGGGCTGACTTTGATTTTGCTTGCCTCGGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | ACACTTGTCCATGGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCGCCGCCACTACATGGTaGTCTTTCACCATCACCATC | + |
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Preference number: 5 (lower is better) Translates to: TLVHGPGSILNTTETEKSAATTW*SFTITI Trigger: GATGGTGATGGTGAAAGACAACCATGTAGTGGCGGC...GCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCCATGGACAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | CCTAGCCACACAGATAGGCCATGTGATGTCAGCTGCCAGTTGCCAGAGTCTTACCCTTCAGCAAACAGTTaGAGGGAAAAATCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PSHTDRPCDVSCQLPESYPSANS*REKSRA Trigger: AGCCCTGGATTTTTCCCTCAAACTGTTTGCTGAAGG...GTAAGACTCTGGCAACTGGCAGCTGACATCACATGGCCTATCTGTGTGGCTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | ACACTTGTCCATGGCCCTGGCTCCATCCTTAACACCACAGAGACAGAAAAGAGCCACTTGGCAGTTGAGTaGAGTGAAGATGGCGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: TLVHGPGSILNTTETEKSHLAVE*SEDGVK Trigger: TTTGACGCCATCTTCACTCAACTCAACTGCCAAGTG...GCTCTTTTCTGTCTCTGTGGTGTTAAGGATGGAGCCAGGGCCATGGACAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS-3UTR CAA 90 bp | CACAAGCTGGAGATGGCAGAGCTAGTGGGAAGCCTAGGTAAAAAGCCTAGATATGAGGAACCAGGACACTaGGCAGTTGAGTTGAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: HKLEMAELVGSLGKKPRYEEPGH*AVELSE Trigger: TTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTC...ATATCTAGGCTTTTTACCTAGGCTTCCCACTAGCTCTGCCATCTCCAGCTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CCAGCCGGTGCTCCTGGCCACCTCCACAGCTGTCGCTaGCGCGCTGGCAATCCCACTGCAGCGGGCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PAGAPGHLHSCR*RAGNPTAAGQG Trigger: ACCCTGGCCCGCTGCAGTGGGATTGCCAGCGCGGCAGCGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | TCTTCCTCGTGCCCGCCACGTGTCCAGTCCAGCCGGTaGTCCTGGCCACCTCCACAGCTGTCGCTGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSCPPRVQSSR*SWPPPQLSLPR Trigger: GCGCGGCAGCGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGGACTGGACACGTGGCGGGCACGAGGAAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 72 bp | TCGTGCCCGCCACGTGTCCAGTCCAGCCGGTGCTCCTaGCCACCTCCACAGCTGTCGCTGCCGCGCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SCPPRVQSSRCS*PPPQLSLPRWQ Trigger: TTGCCAGCGCGGCAGCGACAGCTGTGGAGGTGGCCAGGAGCACCGGCTGGACTGGACACGTGGCGGGCACGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | TCTCCACCAGTCGGAACCCAGGTGTCGTCTTCCTCGTaGCCGCCACGTGTCCAGTCCAGCCGGTGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPPVGTQVSSSS*PPRVQSSRCSW Trigger: CCAGGAGCACCGGCTGGACTGGACACGTGGCGGGCACGAGGAAGACGACACCTGGGTTCCGACTGGTGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 72 bp | CAAAGAAGGGTCGCCCTGCCAGAACCCCAGGAGATTTaGCCCACAGCACAGCCTGCGAGGGTGCCGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: QRRVALPEPQEI*PTAQPARVPTR Trigger: CCGGGTCGGCACCCTCGCAGGCTGTGCTGTGGGCCAAATCTCCTGGGGTTCTGGCAGGGCGACCCTTCTTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CAGGGAAAACCCGGCTGCCTGCCGAGCCTTCAGCACTaGCCTTTCCATGCTGCCGGCCGCCACTACATGGTT | + |
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Preference number: 6 (lower is better) Translates to: QGKPGCLPSLQH*PFHAAGRHYMV Trigger: AACCATGTAGTGGCGGCCGGCAGCATGGAAAGGGCAGTGCTGAAGGCTCGGCAGGCAGCCGGGTTTTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | TCCCAGGTCGTAGCGGTGGCATGCTGCCCCGCCTACTaGGAGCCCATACTTCTCCACCAGTCGGAACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SQVVAVACCPAY*EPILLHQSEPR Trigger: CCTGGGTTCCGACTGGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | AGCACAGCCTGCGAGGGTGCCGACCCGGTAACCAAGGATGCAAAATaGAGGCCCGGGCAGTCCTCTTGCAGCCAGCTGTTCGCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: STACEGADPVTKDAK*RPGQSSCSQLFARA Trigger: AGCCCTGGCGAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGGTCGGCACCCTCGCAGGCTGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | CACCATCCCTCCCAGGTCGTAGCGGTGGCATGCTGCCCCGCCTACTaGGAGCCCATACTTCTCCACCAGTCGGAACCCAGGTGTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HHPSQVVAVACCPAY*EPILLHQSEPRCRL Trigger: AAGACGACACCTGGGTTCCGACTGGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGAGGGATGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CACAGCCTGCGAGGGTGCCGACCCGGTAACCAAGGATaGAAAATTGAGGCCCGGGCAGTCCTCTTGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: HSLRGCRPGNQG*KIEARAVLLQP Trigger: TGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGGTCGGCACCCTCGCAGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CATCACCATCCCTCCCAGGTCGTAGCGGTGGCATGCTaGCCCGCCTACTTGGAGCCCATACTTCTCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: HHHPSQVVAVAC*PAYLEPILLHQ Trigger: CTGGTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGAGGGATGGTGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CACCATCACCATCCCTCCCAGGTCGTAGCGGTGGCATaGTGCCCCGCCTACTTGGAGCCCATACTTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: HHHHPSQVVAVA*CPAYLEPILLH Trigger: GTGGAGAAGTATGGGCTCCAAGTAGGCGGGGCAGCATGCCACCGCTACGACCTGGGAGGGATGGTGATGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CGGCTGCCTGCCGAGCCTTCAGCACTGCCCTTTCCATaGTGCCGGCCGCCACTACATGGTTGTCTTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: RLPAEPSALPFP*CRPPLHGCLSP Trigger: TGGTGAAAGACAACCATGTAGTGGCGGCCGGCAGCATGGAAAGGGCAGTGCTGAAGGCTCGGCAGGCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | CCCCAGCCTCTGCTGCCCGAAAGGCCTCCTCCAGGCTaGTACATTCCACCTCTACCTTCAGGGAAAACCCGG | + |
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Preference number: 6 (lower is better) Translates to: PQPLLPERPPPG*YIPPLPSGKTR Trigger: CCGGGTTTTCCCTGAAGGTAGAGGTGGAATGTAGCAGCCTGGAGGAGGCCTTTCGGGCAGCAGAGGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | CCCAACGAGATGACGTCAATGTGTGTCCCACAGAACTGGGTGAGGTaGTCCAGTGTGACGCCCCCACTGGCTTCCACCGACACGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PNEMTSMCVPQNWVR*SSVTPPLASTDTLG Trigger: CCCCAGCGTGTCGGTGGAAGCCAGTGGGGGCGTCACACTGGACAACCTCACCCAGTTCTGTGGGACACACATTGACGTCATCTCGTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | TGCGAGGGTGCCGACCCGGTAACCAAGGATGCAAAATaGAGGCCCGGGCAGTCCTCTTGCAGCCAGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: CEGADPVTKDAK*RPGQSSCSQLF Trigger: GAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTTACCGGGTCGGCACCCTCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS TCA 72 bp | CCCTCCGGGAGGAACCAGGACACTTGGCAGTTGAGTTaGGTGAAGATGGCGTCAAAGAAGGGTCGCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSGRNQDTWQLS*VKMASKKGRPA Trigger: GGCAGGGCGACCCTTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | CAGCTTCGATCCCTCCGGGAGGAACCAGGACACTTGGCAGTTGAGTaGAGTGAAGATGGCGTCAAAGAAGGGTCGCCCTGCCAGAACCCC | + |
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Preference number: 6 (lower is better) Translates to: QLRSLREEPGHLAVE*SEDGVKEGSPCQNP Trigger: GGGGTTCTGGCAGGGCGACCCTTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGGATCGAAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | GACCACAGGTACCAGCTTCGATCCCTCCGGGAGGAACCAGGACACTaGGCAGTTGAGTTGAGTGAAGATGGCGTCAAAGAAGGGTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: DHRYQLRSLREEPGH*AVELSEDGVKEGSP Trigger: GGGCGACCCTTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGGATCGAAGCTGGTACCTGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS GCA 72 bp | ACCAAGGATGCAAAATTGAGGCCCGGGCAGTCCTCTTaGAGCCAGCTGTTCGCCAGGGCTGCCAAGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TKDAKLRPGQSS*SQLFARAAKVV Trigger: TACAACCTTGGCAGCCCTGGCGAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | AACCAAGGATGCAAAATTGAGGCCCGGGCAGTCCTCTaGCAGCCAGCTGTTCGCCAGGGCTGCCAAGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: NQGCKIEARAVL*QPAVRQGCQGC Trigger: ACAACCTTGGCAGCCCTGGCGAACAGCTGGCTGCAAGAGGACTGCCCGGGCCTCAATTTTGCATCCTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | TCCCTCCGGGAGGAACCAGGACACTTGGCAGTTGAGTaGAGTGAAGATGGCGTCAAAGAAGGGTCGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLREEPGHLAVE*SEDGVKEGSPC Trigger: GCAGGGCGACCCTTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | GTAGCTGCTGTGGGGTGCAGCTCCTCAGGCTTAAAGTaGTCCAGCATTACCAGGTCAGCCCCAGCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VAAVGCSSSGLK*SSITRSAPASA Trigger: AGCAGAGGCTGGGGCTGACCTGGTAATGCTGGACAACTTTAAGCCTGAGGAGCTGCACCCCACAGCAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 90 bp | GCTTTAAGTGTAGCTGCTGTGGGGTGCAGCTCCTCAGGCTTAAAGTaGTCCAGCATTACCAGGTCAGCCCCAGCCTCTGCTGCCCGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ALSVAAVGCSSSGLK*SSITRSAPASAARK Trigger: CTTTCGGGCAGCAGAGGCTGGGGCTGACCTGGTAATGCTGGACAACTTTAAGCCTGAGGAGCTGCACCCCACAGCAGCTACACTTAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CAA 72 bp | TACCAGCTTCGATCCCTCCGGGAGGAACCAGGACACTaGGCAGTTGAGTTGAGTGAAGATGGCGTCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: YQLRSLREEPGH*AVELSEDGVKE Trigger: TTCTTTGACGCCATCTTCACTCAACTCAACTGCCAAGTGTCCTGGTTCCTCCCGGAGGGATCGAAGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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| CDS CCA 72 bp | AACAGTTTGAGGGAAAAATCCAGGGCTGGAGCAGCCTaGGTCAGCATTCCCAACGAGATGACGTCAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: NSLREKSRAGAA*VSIPNEMTSMC Trigger: ACACATTGACGTCATCTCGTTGGGAATGCTGACCCAGGCTGCTCCAGCCCTGGATTTTTCCCTCAAACTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032912.6 |
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