Pregenerated sensors for QPCTL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030407Ensembl transcript IDs: ENSMUST00000032566.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTTACTCTGTAGACCAGGCTGGCATGGAACTCAGAGATCCACCTaGCTCTACTGCCTGAGTGCTGGGATTAAAAGCGTGCGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: NLLCRPGWHGTQRST*LYCLSAGIKSVRHH Trigger: GTGGTGGCGCACGCTTTTAATCCCAGCACTCAGGCAGTAGAGGCAGGTGGATCTCTGAGTTCCATGCCAGCCTGGTCTACAGAGTAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 90 bp | ATCCAGGTGGACCTCTGTCTATTCAGTCCATTCCCACTCTCAACCTaGCAAAGGCAGTATTTCCCAAAGAATCCTGGAGGCAGCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: IQVDLCLFSPFPLST*QRQYFPKNPGGSFT Trigger: AGTGAAGCTGCCTCCAGGATTCTTTGGGAAATACTGCCTTTGGCAGGTTGAGAGTGGGAATGGACTGAATAGACAGAGGTCCACCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 90 bp | ATTCCCACTCTCAACCTGCCAAAGGCAGTATTTCCCAAAGAATCCTaGAGGCAGCTTCACTTGAAATACCTTCCTGCAAAGAGGTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: IPTLNLPKAVFPKES*RQLHLKYLPAKRSH Trigger: GTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGAAGCTGCCTCCAGGATTCTTTGGGAAATACTGCCTTTGGCAGGTTGAGAGTGGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 90 bp | TGCCAAAGGCAGTATTTCCCAAAGAATCCTGGAGGCAGCTTCACTTaGAATACCTTCCTGCAAAGAGGTCCCACTGTGGAGTACTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: CQRQYFPKNPGGSFT*NTFLQRGPTVEYFE Trigger: CTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGAAGCTGCCTCCAGGATTCTTTGGGAAATACTGCCTTTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 90 bp | GAGAACCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTGCAGTaGGGAAGTTCATTTAGTGACACTTTTCATGAGCGCTGTGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: ENHFILLLWKISPLQ*GSSFSDTFHERCGL Trigger: AAGGCCACAGCGCTCATGAAAAGTGTCACTAAATGAACTTCCTCACTGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 90 bp | CACTTGAAATACCTTCCTGCAAAGAGGTCCCACTGTGGAGTACTTTaGGAACCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: HLKYLPAKRSHCGVL*EPFHPLTLEDLTFA Trigger: TGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 90 bp | ACTTTGAGAACCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTaGAGTGAGGAAGTTCATTTAGTGACACTTTTCATGAGCGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: TLRTISSSYSGRSHL*SEEVHLVTLFMSAV Trigger: CACAGCGCTCATGAAAAGTGTCACTAAATGAACTTCCTCACTGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGGTTCTCAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGTCCACCTGCCTCTACTaGCTGAGTGCTGGGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: FCVGPGCPETYSVDQAGMSTCLY*LSAGIK Trigger: TTTAATCCCAGCACTCAGGCAGTAGAGGCAGGTGGA...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTACACACGTGGCTTTAATGCCAGTTCTAGAGGATCTAACACTCTCACAAAACTGGCCACCCTGCACTaGCTCAAGGTGCCCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: QYTRGFNASSRGSNTLTKLATLH*LKVPLS Trigger: GGACAGGGGCACCTTGAGCCAGTGCAGGGTGGCCAG...TTTTGTGAGAGTGTTAGATCCTCTAGAACTGGCATTAAAGCCACGTGTGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR TCA 90 bp | ACGGCTCTTGTGTTCAAGATCTACATAGAAAGTTCCAGGCCAGCCAGGCAGTGGGGAGGTAGAGGAAGGTaGATCTCTAAATTTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TALVFKIYIESSRPARQWGGRGR*ISKFEA Trigger: GGCCTCAAATTTAGAGATTCACCTTCCTCTACCTCC...CCACTGCCTGGCTGGCCTGGAACTTTCTATGTAGATCTTGAACACAAGAGCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTATATGGCAGTATTTCCCAAAGAATCCTaGAGGCAGCTTCACTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: GYPSRGSRFNSQCLYMAVFPKES*RQLHLK Trigger: TTTCAAGTGAAGCTGCCTCCAGGATTCTTTGGGAAA...TACTGCCATATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 90 bp | TCACTTGAAATACCTTCCTGCAAAGAGGTCCCACTGTGGAGTACTTaGAGAACCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SLEIPSCKEVPLWST*RTISSSYSGRSHLC Trigger: GCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTACACACGTGGCTTTAATGCCAGTTCTAGAGGATCTAACACTCTCACAAAAATTCCTTATTTCCTTTaGCTCTTTCGTGCCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QYTRGFNASSRGSNTLTKIPYFL*LFRASV Trigger: CACTGAGGCACGAAAGAGCCAAAGGAAATAAGGAAT...TTTTGTGAGAGTGTTAGATCCTCTAGAACTGGCATTAAAGCCACGTGTGTACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCAGTGTCTGTATATGGCAGTACACACGTGGCTTTAATGCCAGTTCTAGAACATCATTTGGTCCCTaGAACCTTCCAGTTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: IPSVCIWQYTRGFNASSRTSFGP*NLPVIY Trigger: GTAAATAACTGGAAGGTTCCAGGGACCAAATGATGT...TCTAGAACTGGCATTAAAGCCACGTGTGTACTGCCATATACAGACACTGGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTACACACGTGGCTTTAATGCCAGTTCTAGAGGATCTAACACTCTCACAAAAGGAAGATCTCACCTTTaGAGTGAGGAAGTTCATTTA | + |
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Preference number: 2 (lower is better) Translates to: QYTRGFNASSRGSNTLTKGRSHL*SEEVHL Trigger: TAAATGAACTTCCTCACTGCAAAGGTGAGATCTTCC...TTTTGTGAGAGTGTTAGATCCTCTAGAACTGGCATTAAAGCCACGTGTGTACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCATGGAACTCAGAGATCCACCTaGCTCTACTGCCTGAGTGCTGGGATTAAAAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWHGTQRST*LYCLSAGIKSV Trigger: CACGCTTTTAATCCCAGCACTCAGGCAGTAGAGGCAGGTGGATCTCTGAGTTCCATGCCAGCCTGGTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 72 bp | AAGATCTACATAGAAAGTTCCAGGCCAGCCAGGCAGTaGGGGCACACGCCTTTAATCCCAGCAAGTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: KIYIESSRPARQ*GHTPLIPASLE Trigger: CTCCAGACTTGCTGGGATTAAAGGCGTGTGCCCCCACTGCCTGGCTGGCCTGGAACTTTCTATGTAGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTACCCTTCCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTATATGGCAGTACCGCAATGGATTCATTaGGTTGGTGGTGCTGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: GYPSRGSRFNSQCLYMAVPQWIH*VGGAGP Trigger: TGGACCAGCACCACCAACCAAATGAATCCATTGCGG...TACTGCCATATACAGACACTGGGAATTGAACCTGGATCCTCTGGAAGGGTAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCAAGATCTACATAGAAAGTTCCAGGCCAGCCAGGCAGTGGGGGCACACGCCACTGTGGAGTACTTaGAGAACCATTTCATCCTCT | + |
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Preference number: 3 (lower is better) Translates to: VFKIYIESSRPARQWGHTPLWST*RTISSS Trigger: AGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGG...CGTGTGCCCCCACTGCCTGGCTGGCCTGGAACTTTCTATGTAGATCTTGAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 72 bp | TTTGAAGCAGGGTTTCTGTGTTGGCCCTGGCTGTCCTaGAACTTACTCTGTAGACCAGGCTGGCATGGAACT | + |
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Preference number: 3 (lower is better) Translates to: FEAGFLCWPWLS*NLLCRPGWHGT Trigger: AGTTCCATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAAACCCTGCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 72 bp | GACCTCTGTCTATTCAGTCCATTCCCACTCTCAACCTaGCAAAGGCAGTATTTCCCAAAGAATCCTGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: DLCLFSPFPLST*QRQYFPKNPGG Trigger: GCCTCCAGGATTCTTTGGGAAATACTGCCTTTGGCAGGTTGAGAGTGGGAATGGACTGAATAGACAGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 72 bp | AGAATCCTGGAGGCAGCTTCACTTGAAATACCTTCCTaGAAAGAGGTCCCACTGTGGAGTACTTTGAGAACC | + |
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Preference number: 3 (lower is better) Translates to: RILEAASLEIPS*KEVPLWSTLRT Trigger: GGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGAAGCTGCCTCCAGGATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 72 bp | AAAGGAAAGGGTAGGTTCGGGTTAACTCCATCCAGGTaGACCTCTGTCTATTCAGTCCATTCCCACTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: KGKGRFGLTPSR*TSVYSVHSHSQ Trigger: TTGAGAGTGGGAATGGACTGAATAGACAGAGGTCCACCTGGATGGAGTTAACCCGAACCTACCCTTTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 72 bp | CTCAACCTGCCAAAGGCAGTATTTCCCAAAGAATCCTaGAGGCAGCTTCACTTGAAATACCTTCCTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: LNLPKAVFPKES*RQLHLKYLPAK Trigger: CTTTGCAGGAAGGTATTTCAAGTGAAGCTGCCTCCAGGATTCTTTGGGAAATACTGCCTTTGGCAGGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 72 bp | CCAGAGGATCCAGGTTCAATTCCCAGTGTCTGTATATaGCAGTACACACGTGGCTTTAATGCCAGTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: PEDPGSIPSVCI*QYTRGFNASSR Trigger: TCTAGAACTGGCATTAAAGCCACGTGTGTACTGCCATATACAGACACTGGGAATTGAACCTGGATCCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 72 bp | TTTGGCTCTTTCGTGCCTCAGTGTTCCTTGCATCCTTaGAACACGGTGACTTCACATGGTTGTAGCATACAT | + |
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Preference number: 3 (lower is better) Translates to: FGSFVPQCSLHP*NTVTSHGCSIH Trigger: ATGTATGCTACAACCATGTGAAGTCACCGTGTTTCAAGGATGCAAGGAACACTGAGGCACGAAAGAGCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 72 bp | TACCTTCCTGCAAAGAGGTCCCACTGTGGAGTACTTTaGGAACCATTTCATCCTCTTACTCTGGAAGATCTC | + |
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Preference number: 3 (lower is better) Translates to: YLPAKRSHCGVL*EPFHPLTLEDL Trigger: GAGATCTTCCAGAGTAAGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 72 bp | GCCTTTAATCCCAGCAAGTCTGGAGGTAGAGGAAGGTaGATCTCTAAATTTGAGGCCAGCTGGTCTATAGAT | + |
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Preference number: 3 (lower is better) Translates to: AFNPSKSGGRGR*ISKFEASWSID Trigger: ATCTATAGACCAGCTGGCCTCAAATTTAGAGATTCACCTTCCTCTACCTCCAGACTTGCTGGGATTAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR TCA 72 bp | TTCATCCTCTTACTCTGGAAGATCTCACCTTTGCAGTaGGGAAGTTCATTTAGTGACACTTTTCATGAGCGC | + |
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Preference number: 3 (lower is better) Translates to: FILLLWKISPLQ*GSSFSDTFHER Trigger: GCGCTCATGAAAAGTGTCACTAAATGAACTTCCTCACTGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CCA 72 bp | TCACTTGAAATACCTTCCTGCAAAGAGGTCCCACTGTaGAGTACTTTGAGAACCATTTCATCCTCTTACTCT | + |
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Preference number: 3 (lower is better) Translates to: SLEIPSCKEVPL*STLRTISSSYS Trigger: AGAGTAAGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR GCA 72 bp | ACCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTaGAGTGAGGAAGTTCATTTAGTGACACTTTTCATG | + |
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Preference number: 3 (lower is better) Translates to: TISSSYSGRSHL*SEEVHLVTLFM Trigger: CATGAAAAGTGTCACTAAATGAACTTCCTCACTGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | CAGGCCAGCCAGGCAGTGGGGGCACACGCCTTTAATCCCAGCAAGTCTGGAGGTCGCTGCGGATCCAGCTaGCCTACCACCAGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QASQAVGAHAFNPSKSGGRCGSS*PTTSRS Trigger: GCTGCGGCTGGTGGTAGGGCAGCTGGATCCGCAGCG...ACCTCCAGACTTGCTGGGATTAAAGGCGTGTGCCCCCACTGCCTGGCTGGCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | AGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTaGGCACCCCTGAGCCAAGCAGACCGTAGACCATCG | + |
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Preference number: 4 (lower is better) Translates to: SAVAFRSPLPSR*APLSQADRRPS Trigger: CGATGGTCTACGGTCTGCTTGGCTCAGGGGTGCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | CAGGCCAGCCAGGCAGTGGGGGCACACGCCTTTAATCCCAGCAAGTCTGGAGGTATCACTTCCTGGGGGTaGGACTGCAGTAGGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: QASQAVGAHAFNPSKSGGITSWG*DCSRFS Trigger: GCTGAACCTACTGCAGTCTCACCCCCAGGAAGTGAT...ACCTCCAGACTTGCTGGGATTAAAGGCGTGTGCCCCCACTGCCTGGCTGGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCGTGACGGGCAGCTCCTaGGTCAAGTGTGGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGVTGSS*VKCGHH Trigger: GTGGTGGCCACACTTGACCCAGGAGCTGCCCGTCAC...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGAATGGCAGGCGAGGGTaGGGTGACGGGCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FCVGPGCPETYSVDQAGMNGRRG*GDGQLL Trigger: CAGGAGCTGCCCGTCACCTCACCCTCGCCTGCCATT...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCGGCACAGGGCACAGCTaGATCTGTGGCCCCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGGTGHS*ICGPHK Trigger: TTTGTGGGGGCCACAGATTCAGCTGTGCCCTGTGCC...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | CAGGCCAGCCAGGCAGTGGGGGCACACGCCTTTAATCCCAGCAAGTCTGGAGGTATAGAGGGAGTCCTTTaGTCCCCACTCCTTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QASQAVGAHAFNPSKSGGIEGVL*SPLLQC Trigger: GCACTGAAGGAGTGGGGACCAAAGGACTCCCTCTAT...ACCTCCAGACTTGCTGGGATTAAAGGCGTGTGCCCCCACTGCCTGGCTGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCTGCACAGTGGGTGGGTaGAGGTTGGCCTCGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGCTVGG*RLASVS Trigger: TGACACCGAGGCCAACCTCCACCCACCCACTGTGCA...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGGTTCCCCAGAGACGCTaGGGATCCAGCTGCCCTACC | + |
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Preference number: 4 (lower is better) Translates to: FCVGPGCPETYSVDQAGMVPQRR*GSSCPT Trigger: GGTAGGGCAGCTGGATCCGCAGCGTCTCTGGGGAAC...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCCTGCAGGGTCACCGGTaGTGCCTGCTGCTTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGLQGHR*CLLLDS Trigger: AGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAG...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGGCACCGGGACCCCTCTaGGAAGGAAGGGGATGTGGT | + |
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Preference number: 4 (lower is better) Translates to: FCVGPGCPETYSVDQAGMAPGPL*EGRGCG Trigger: ACCACATCCCCTTCCTTCGCAGAGGGGTCCCGGTGC...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCATAGACTCCATGATCTaGGCTAGGTGCCGGGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGIDSMI*ARCREP Trigger: TGGCTCCCGGCACCTAGCTCAGATCATGGAGTCTAT...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | GACACTTTTCATGAGCGCTGTGGCCTTCCGTTCCCCTTTACCCTCGAGGTTGGCGGGGCCAGGGCTGTGTaGTATAGACTCCATGATCTG | + |
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Preference number: 4 (lower is better) Translates to: DTFHERCGLPFPFTLEVGGARAV*YRLHDL Trigger: CAGATCATGGAGTCTATACCACACAGCCCTGGCCCC...GCCAACCTCGAGGGTAAAGGGGAACGGAAGGCCACAGCGCTCATGAAAAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | GTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGGAACTCAGTAGGTTCAGCCGGTaGAGGCGCTTCTCAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: VGPGCPETYSVDQAGMELSRFSR*RRFSML Trigger: GAGCATTGAGAAGCGCCTTCACCGGCTGAACCTACT...GAGTTCCATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGTCCTCAACCCCAGGGTaGCAGCTGTTCCAGACGATA | + |
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Preference number: 4 (lower is better) Translates to: FCVGPGCPETYSVDQAGMSSTPG*QLFQTI Trigger: TATCGTCTGGAACAGCTGGCACCCTGGGGTTGAGGA...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | TTTAGCTTTTTGAAGCAGGGTTTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACAGCAGGGGCAGGAACTaGACTCGCGGCAGAAGACGG | + |
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Preference number: 4 (lower is better) Translates to: FSFLKQGFCVGPGCPETYSRGRN*TRGRRR Trigger: CCGTCTTCTGCCGCGAGTGCAGTTCCTGCCCCTGCT...GTAAGTTTCAGGACAGCCAGGGCCAACACAGAAACCCTGCTTCAAAAAGCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | GCTCAAGGTGCCCCTGTCCAGTCCACAGCTAAGTGTATAAGATTCCTTCAAGGTTCCAAGAAAAGCAGCTaGAGGGTCACCGGTGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: AQGAPVQSTAKCIRFLQGSKKSS*RVTGAA Trigger: GGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGA...ACCTTGAAGGAATCTTATACACTTAGCTGTGGACTGGACAGGGGCACCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTCTGTAGACCAGGCTGGCATGGGAACACAGCAAGGATaGGGCTCAGGTTATGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FCVGPGCPETYSVDQAGMGTQQG*GSGYAQ Trigger: CTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCC...CATGCCAGCCTGGTCTACAGAGTAAGTTTCAGGACAGCCAGGGCCAACACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | TTGGGCTTGAGAACCTCTGGCTGGCTATGGCAAGGTATAAACCTGTTATCCCAGCCACCAGCCGCAGCTTaGCTTCTGAAAGGCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLRTSGWLWQGINLLSQPPAAA*LLKGFR Trigger: TCGGAAGCCTTTCAGAAGCCAAGCTGCGGCTGGTGG...CTGGGATAACAGGTTTATACCTTGCCATAGCCAGCCAGAGGTTCTCAAGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | GCTCAAGGTGCCCCTGTCCAGTCCACAGCTAAGTGTATAAGATTCCTTCAAGGTAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQGAPVQSTAKCIRFLQGKSSIA*ILVGPG Trigger: CCCTGGCCCCACCAGGATCCAGGCTATTGAGCTCTT...ACCTTGAAGGAATCTTATACACTTAGCTGTGGACTGGACAGGGGCACCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | TTTAGCTTTTTGAAGCAGGGTTTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACTGGGTGGGTGGAGGTTaGCCTCGGTGTCAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSFLKQGFCVGPGCPETYWVGGG*PRCQQV Trigger: CACCTGCTGACACCGAGGCCAACCTCCACCCACCCA...GTAAGTTTCAGGACAGCCAGGGCCAACACAGAAACCCTGCTTCAAAAAGCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | TGGTGCTGGTCCACGTGCCAGCCCGTGACACATCATTaGGTCCCTGGAACCTTCCAGTTATTTACTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WCWSTCQPVTHH*VPGTFQLFTSG Trigger: TCCTGAAGTAAATAACTGGAAGGTTCCAGGGACCAAATGATGTGTCACGGGCTGGCACGTGGACCAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | CTGACATCAAACATTAGCCGCAATGGATTCATTTGGTaGGTGGTGCTGGTCCACGTGCCAGCCCGTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LTSNISRNGFIW*VVLVHVPARDT Trigger: TGTGTCACGGGCTGGCACGTGGACCAGCACCACCAACCAAATGAATCCATTGCGGCTAATGTTTGATGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR TCA 90 bp | ATTCCCAGTGTCTGTATATGGCAGTACACACGTGGCTTTAATGCCAGTTCTAGACCGCAGCTTGGCTTCTaGAAGGCTTCCGATCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSVCIWQYTRGFNASSRPQLGF*KASDQR Trigger: CCGCTGATCGGAAGCCTTTCAGAAGCCAAGCTGCGG...TCTAGAACTGGCATTAAAGCCACGTGTGTACTGCCATATACAGACACTGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | GTGACACATCATTTGGTCCCTGGAACCTTCCAGTTATTTACTTCAGGACAGAAGATGCTCCTCAGTCGCTaGAACCAGCGGGCTGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTHHLVPGTFQLFTSGQKMLLSR*NQRAVR Trigger: TCGCACAGCCCGCTGGTTCCAGCGACTGAGGAGCAT...CTTCTGTCCTGAAGTAAATAACTGGAAGGTTCCAGGGACCAAATGATGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR GCA 90 bp | ATTCCCAGTGTCTGTATATGGCAGTACACACGTGGCTTTAATGCCAGTTCTAGAACCGGTGCTGCCTGCTaGTTGATTCTGCTCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IPSVCIWQYTRGFNASSRTGAAC*LILLSM Trigger: CATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGT...TCTAGAACTGGCATTAAAGCCACGTGTGTACTGCCATATACAGACACTGGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | AGTACGGTAGCAAATGAACTGACATCAAACATTAGCCGCAATGGATTCATTTGGGGGGGCTCCCCGGGTTaGAAGTACATCACTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STVANELTSNISRNGFIWGGSPG*KYITSW Trigger: CCAGGAAGTGATGTACTTCCAACCCGGGGAGCCCCC...CCAAATGAATCCATTGCGGCTAATGTTTGATGTCAGTTCATTTGCTACCGTACT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | CCATTTCATCCTCTTACTCTGGAAGATCTCACCTTTGCAGTGAGGAAGTTCATTCGAAGGAAGGGGATGTaGTCATCTTCCACAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PFHPLTLEDLTFAVRKFIRRKGM*SSSTGP Trigger: CGGCCCTGTGGAAGATGACCACATCCCCTTCCTTCG...AATGAACTTCCTCACTGCAAAGGTGAGATCTTCCAGAGTAAGAGGATGAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | GCAGTATTTCCCAAAGAATCCTGGAGGCAGCTTCACTaGAAATACCTTCCTGCAAAGAGGTCCCACTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVFPKESWRQLH*KYLPAKRSHCG Trigger: TCCACAGTGGGACCTCTTTGCAGGAAGGTATTTCAAGTGAAGCTGCCTCCAGGATTCTTTGGGAAATACTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CCA 90 bp | AAGGATTCCTTATTTCCTTTGGCTCTTTCGTGCCTCAGTGTTCCTTGCATCCTTGCAGAAGACGGCGCTTaGAAAGTGAGGGTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDSLFPLALSCLSVPCILAEDGA*KVRVVS Trigger: TGAAACCACCCTCACTTTCCAAGCGCCGTCTTCTGC...AAGGATGCAAGGAACACTGAGGCACGAAAGAGCCAAAGGAAATAAGGAATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
||
| CDS-3UTR TCA 90 bp | AGTACGGTAGCAAATGAACTGACATCAAACATTAGCCGCAATGGATTCATTTGGGCTGTGCGAGGGAAGTaGCTGAAGAAGATCGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: STVANELTSNISRNGFIWAVRGK*LKKIGL Trigger: CAGTCCGATCTTCTTCAGTCACTTCCCTCGCACAGC...CCAAATGAATCCATTGCGGCTAATGTTTGATGTCAGTTCATTTGCTACCGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | ACTTCAGGACAGAAGCCAAAGGATTCCTTATTTCCTTaGGCTCTTTCGTGCCTCAGTGTTCCTTGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSGQKPKDSLFP*ALSCLSVPCIL Trigger: AAGGATGCAAGGAACACTGAGGCACGAAAGAGCCAAAGGAAATAAGGAATCCTTTGGCTTCTGTCCTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| 3UTR CAA 72 bp | ATACCTTCCTGCAAAGAGGTCCCACTGTGGAGTACTTaGAGAACCATTTCATCCTCTTACTCTGGAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSCKEVPLWST*RTISSSYSGRS Trigger: AGATCTTCCAGAGTAAGAGGATGAAATGGTTCTCAAAGTACTCCACAGTGGGACCTCTTTGCAGGAAGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | GCACTCGCGGCAGAAGACGGCGCTTGGAAAGTGAGGGTGGTTTCATaGGGCCACGATCCTCGAGCCGCTGCCGGGGCCGCCCGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALAAEDGAWKVRVVS*GHDPRAAAGAARGS Trigger: GGAGCCGCGGGCGGCCCCGGCAGCGGCTCGAGGATCGTGGCCTCATGAAACCACCCTCACTTTCCAAGCGCCGTCTTCTGCCGCGAGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | CCCAGAGACGCTGCGGATCCAGCTGCCCTACCACCAGCCGCAGCTTaGCTTCTGAAAGGCTTCCGATCAGCGGGACCCGCAGATCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRDAADPAALPPAAA*LLKGFRSAGPADPG Trigger: GCCGGGATCTGCGGGTCCCGCTGATCGGAAGCCTTTCAGAAGCCAAGCTGCGGCTGGTGGTAGGGCAGCTGGATCCGCAGCGTCTCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | CAGGGGCAGGAACTGCACTCGCGGCAGAAGACGGCGCTTGGAAAGTaGGGGTGGTTTCATGAGGCCACGATCCTCGAGCCGCTGCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGQELHSRQKTALGK*GWFHEATILEPLPG Trigger: CCCCGGCAGCGGCTCGAGGATCGTGGCCTCATGAAACCACCCTCACTTTCCAAGCGCCGTCTTCTGCCGCGAGTGCAGTTCCTGCCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | TGCACAGTGGGTGGGTGGAGGTTGGCCTCGGTGTCAGCAGGTGTGTaGCACACAGCAGGGAAGGGCGTGGCAATGAGGTGGAGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CTVGGWRLASVSAGV*HTAGKGVAMRWSTG Trigger: CCCGGTGCTCCACCTCATTGCCACGCCCTTCCCTGCTGTGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | CGGTGTCAGCAGGTGTGTGCCACACAGCAGGGAAGGGCGTGGCAATaGGGTGGAGCACCGGGACCCCTCTGCGAAGGAAGGGGATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCQQVCATQQGRAWQ*GGAPGPLCEGRGCG Trigger: ACCACATCCCCTTCCTTCGCAGAGGGGTCCCGGTGCTCCACCTCATTGCCACGCCCTTCCCTGCTGTGTGGCACACACCTGCTGACACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | CAGCAAGGATGCGGCTCAGGTTATGCACAGTGGGTGGGTGGAGGTTaGCCTCGGTGTCAGCAGGTGTGTGCCACACAGCAGGGAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QQGCGSGYAQWVGGG*PRCQQVCATQQGRA Trigger: CGCCCTTCCCTGCTGTGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | AAGTGTGGCCACCACGTTCCCGAAGTCCAGTGGCCCCAAGGGGGTTaGGGCCGTGAATGGGTCCAGTTCAACATGCCAGCCTGCCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: KCGHHVPEVQWPQGG*GREWVQFNMPACRQ Trigger: CTGTCGGCAGGCTGGCATGTTGAACTGGACCCATTCACGGCCTCAACCCCCTTGGGGCCACTGGACTTCGGGAACGTGGTGGCCACACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | CCCAGGTACTCGGCCAGGAACACAGCAAGGATGCGGCTCAGGTTATaGACAGTGGGTGGGTGGAGGTTGGCCTCGGTGTCAGCAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PRYSARNTARMRLRL*TVGGWRLASVSAGV Trigger: CACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCCTGGCCGAGTACCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | GGCCAGGAACACAGCAAGGATGCGGCTCAGGTTATGCACAGTGGGTaGGTGGAGGTTGGCCTCGGTGTCAGCAGGTGTGTGCCACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQEHSKDAAQVMHSG*VEVGLGVSRCVPHS Trigger: GCTGTGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | CTTAGAGTCATAATGGCAGGCGAGGGTGAGGTGACGGGCAGCTCCTaGGTCAAGTGTGGCCACCACGTTCCCGAAGTCCAGTGGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRVIMAGEGEVTGSS*VKCGHHVPEVQWPQ Trigger: TTGGGGCCACTGGACTTCGGGAACGTGGTGGCCACACTTGACCCAGGAGCTGCCCGTCACCTCACCCTCGCCTGCCATTATGACTCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | AGGAACACAGCAAGGATGCGGCTCAGGTTATGCACAGTGGGTGGGTaGAGGTTGGCCTCGGTGTCAGCAGGTGTGTGCCACACAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNTARMRLRLCTVGG*RLASVSAGVCHTAG Trigger: CCCTGCTGTGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | ACTCGGCCAGGAACACAGCAAGGATGCGGCTCAGGTTATGCACAGTaGGTGGGTGGAGGTTGGCCTCGGTGTCAGCAGGTGTGTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TRPGTQQGCGSGYAQ*VGGGWPRCQQVCAT Trigger: TGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCCTGGCCGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | AGTGGCCCCAAGGGGGTTGAGGCCGTGAATGGGTCCAGTTCAACATaGCAGCCTGCCGACAGGGACTGCAACGTAGCCTCCAGGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPKGVEAVNGSSST*QPADRDCNVASRNF Trigger: AAAGTTCCTGGAGGCTACGTTGCAGTCCCTGTCGGCAGGCTGGCATGTTGAACTGGACCCATTCACGGCCTCAACCCCCTTGGGGCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | TGCCTCCTCCCCATCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTaGCTGCTGCTTGATTCTGCTCAGCATGGCATCAAGGGCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLLPIQEKQLQGHRC*LLLDSAQHGIKGLD Trigger: GTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATGGGGAGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | CAGTGCCTCCTCCCCATCCAAGAAAAGCAGCTGCAGGGTCACCGGTaGTGCCTGCTGCTTGATTCTGCTCAGCATGGCATCAAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCLLPIQEKQLQGHR*CLLLDSAQHGIKGL Trigger: CAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATGGGGAGGAGGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | TGCTCCTCAGTCGCTGGAACCAGCGGGCTGTGCGAGGGAAGTGACTaGAGAAGATCGGACTGGATGCTCCCAGAAGGTCGAGGAGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: CSSVAGTSGLCEGSD*RRSDWMLPEGRGGQ Trigger: TTGTCCTCCTCGACCTTCTGGGAGCATCCAGTCCGATCTTCTTCAGTCACTTCCCTCGCACAGCCCGCTGGTTCCAGCGACTGAGGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | TCAATGCTCCTCAGTCGCTGGAACCAGCGGGCTGTGCGAGGGAAGTaGCTGAAGAAGATCGGACTGGATGCTCCCAGAAGGTCGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMLLSRWNQRAVRGK*LKKIGLDAPRRSRR Trigger: CCTCCTCGACCTTCTGGGAGCATCCAGTCCGATCTTCTTCAGTCACTTCCCTCGCACAGCCCGCTGGTTCCAGCGACTGAGGAGCATTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | TCCCCATCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTGCTaGTTGATTCTGCTCAGCATGGCATCAAGGGCCTGGACCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSKKSSCRVTGAAC*LILLSMASRAWTNS Trigger: GGAGTTGGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | TCCTCCCCATCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTaGTGCTTGATTCTGCTCAGCATGGCATCAAGGGCCTGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPSKKSSCRVTGAA*CLILLSMASRAWTN Trigger: GTTGGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATGGGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | GGTGCTGCCTGCTGCTTGATTCTGCTCAGCATGGCATCAAGGGCCTaGACCAACTCCAGAAGCAGGGCACAGGGCACAGCTGAATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GAACCLILLSMASRA*TNSRSRAQGTAESV Trigger: CACAGATTCAGCTGTGCCCTGTGCCCTGCTTCTGGAGTTGGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 90 bp | CATCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTGCTGCTTaGTTCTGCTCAGCATGGCATCAAGGGCCTGGACCAACTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPRKAAAGSPVLPAA*FCSAWHQGPGPTPE Trigger: TTCTGGAGTTGGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | CCAGCGGGCTGTGCGAGGGAAGTGACTGAAGAAGATCGGACTGGATaGTCCCAGAAGGTCGAGGAGGACAAAGAGCTCAATAGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAGCAREVTEEDRTG*SQKVEEDKELNSLD Trigger: ATCCAGGCTATTGAGCTCTTTGTCCTCCTCGACCTTCTGGGAGCATCCAGTCCGATCTTCTTCAGTCACTTCCCTCGCACAGCCCGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | CTGGATGCTCCCAGAAGGTCGAGGAGGACAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCAGGGCTGTGTGGTATAGACTCCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: LDAPRRSRRTKSSIA*ILVGPGLCGIDSMI Trigger: GATCATGGAGTCTATACCACACAGCCCTGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTGTCCTCCTCGACCTTCTGGGAGCATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 90 bp | GCCGTGAATGGGTCCAGTTCAACATGCCAGCCTGCCGACAGGGACTaGAACGTAGCCTCCAGGAACTTTCTCACTTGGAGATTGCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVNGSSSTCQPADRD*NVASRNFLTWRLPE Trigger: TTCTGGCAATCTCCAAGTGAGAAAGTTCCTGGAGGCTACGTTGCAGTCCCTGTCGGCAGGCTGGCATGTTGAACTGGACCCATTCACGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 90 bp | CCTGCCGACAGGGACTGCAACGTAGCCTCCAGGAACTTTCTCACTTaGAGATTGCCAGAACTACCCGGGGGTCGCACAATCAATAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PADRDCNVASRNFLT*RLPELPGGRTINKG Trigger: TCCCTTATTGATTGTGCGACCCCCGGGTAGTTCTGGCAATCTCCAAGTGAGAAAGTTCCTGGAGGCTACGTTGCAGTCCCTGTCGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CAA 90 bp | GTGACACATCATTTGGTCCCTGGAACCTTCCAGTTATTTACTTCAGGACAGAAGGTGGGTGGGTGGAGGTaGGCCTCGGTGTCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTHHLVPGTFQLFTSGQKVGGWR*ASVSAG Trigger: ACCTGCTGACACCGAGGCCAACCTCCACCCACCCAC...CTTCTGTCCTGAAGTAAATAACTGGAAGGTTCCAGGGACCAAATGATGTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CAA 90 bp | TTTAGCTTTTTGAAGCAGGGTTTCTGTGTTGGCCCTGGCTGTCCTGAAACTTACGGTGCTGCCTGCTGCTaGATTCTGCTCAGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSFLKQGFCVGPGCPETYGAACC*ILLSMA Trigger: TGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACC...GTAAGTTTCAGGACAGCCAGGGCCAACACAGAAACCCTGCTTCAAAAAGCTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CAA 90 bp | CAGTACACACGTGGCTTTAATGCCAGTTCTAGAGGATCTAACACTCTCACAAAAGGCAGAAGACGGCGCTaGGAAAGTGAGGGTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QYTRGFNASSRGSNTLTKGRRRR*ESEGGF Trigger: GAAACCACCCTCACTTTCCAAGCGCCGTCTTCTGCC...TTTTGTGAGAGTGTTAGATCCTCTAGAACTGGCATTAAAGCCACGTGTGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS-3UTR CAA 90 bp | AGTACGGTAGCAAATGAACTGACATCAAACATTAGCCGCAATGGATTCATTTGGCATAGAGGGAGTCCTTaGGTCCCCACTCCTTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: STVANELTSNISRNGFIWHRGSP*VPTPSV Trigger: CACTGAAGGAGTGGGGACCAAAGGACTCCCTCTATG...CCAAATGAATCCATTGCGGCTAATGTTTGATGTCAGTTCATTTGCTACCGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CAA 90 bp | CCCCAGAGACGCTGCGGATCCAGCTGCCCTACCACCAGCCGCAGCTaGGCTTCTGAAAGGCTTCCGATCAGCGGGACCCGCAGATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PQRRCGSSCPTTSRS*ASERLPISGTRRSR Trigger: CCGGGATCTGCGGGTCCCGCTGATCGGAAGCCTTTCAGAAGCCAAGCTGCGGCTGGTGGTAGGGCAGCTGGATCCGCAGCGTCTCTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 72 bp | GCTTCCGATCAGCGGGACCCGCAGATCCCGGCTCCGTaGCATCTCCTCAACCCCAGGGTGCCAGCTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASDQRDPQIPAP*HLLNPRVPAVP Trigger: TGGAACAGCTGGCACCCTGGGGTTGAGGAGATGTCACGGAGCCGGGATCTGCGGGTCCCGCTGATCGGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | GGTGGGTGGAGGTTGGCCTCGGTGTCAGCAGGTGTGTaGCACACAGCAGGGAAGGGCGTGGCAATGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GGWRLASVSAGV*HTAGKGVAMRW Trigger: CCACCTCATTGCCACGCCCTTCCCTGCTGTGTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | GCTGCGGATCCAGCTGCCCTACCACCAGCCGCAGCTTaGCTTCTGAAAGGCTTCCGATCAGCGGGACCCGCA | + |
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Preference number: 6 (lower is better) Translates to: AADPAALPPAAA*LLKGFRSAGPA Trigger: TGCGGGTCCCGCTGATCGGAAGCCTTTCAGAAGCCAAGCTGCGGCTGGTGGTAGGGCAGCTGGATCCGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 72 bp | ATCCAGCTGCCCTACCACCAGCCGCAGCTTGGCTTCTaGAAGGCTTCCGATCAGCGGGACCCGCAGATCCCG | + |
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Preference number: 6 (lower is better) Translates to: IQLPYHQPQLGF*KASDQRDPQIP Trigger: CGGGATCTGCGGGTCCCGCTGATCGGAAGCCTTTCAGAAGCCAAGCTGCGGCTGGTGGTAGGGCAGCTGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CAA 90 bp | AGCAGCAGCAGGGGCAGGAACTGCACTCGCGGCAGAAGACGGCGCTaGGAAAGTGAGGGTGGTTTCATGAGGCCACGATCCTCGAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSRGRNCTRGRRRR*ESEGGFMRPRSSSR Trigger: GCGGCTCGAGGATCGTGGCCTCATGAAACCACCCTCACTTTCCAAGCGCCGTCTTCTGCCGCGAGTGCAGTTCCTGCCCCTGCTGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 72 bp | TCCCGAAGTCCAGTGGCCCCAAGGGGGTTGAGGCCGTaGATGGGTCCAGTTCAACATGCCAGCCTGCCGACA | + |
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Preference number: 6 (lower is better) Translates to: SRSPVAPRGLRP*MGPVQHASLPT Trigger: TGTCGGCAGGCTGGCATGTTGAACTGGACCCATTCACGGCCTCAACCCCCTTGGGGCCACTGGACTTCGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 72 bp | CACCACGTTCCCGAAGTCCAGTGGCCCCAAGGGGGTTaGGGCCGTGAATGGGTCCAGTTCAACATGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HHVPEVQWPQGG*GREWVQFNMPA Trigger: GGCTGGCATGTTGAACTGGACCCATTCACGGCCTCAACCCCCTTGGGGCCACTGGACTTCGGGAACGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | ATAATGGCAGGCGAGGGTGAGGTGACGGGCAGCTCCTaGGTCAAGTGTGGCCACCACGTTCCCGAAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IMAGEGEVTGSS*VKCGHHVPEVQ Trigger: CTGGACTTCGGGAACGTGGTGGCCACACTTGACCCAGGAGCTGCCCGTCACCTCACCCTCGCCTGCCATTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | GCAAGGATGCGGCTCAGGTTATGCACAGTGGGTGGGTaGAGGTTGGCCTCGGTGTCAGCAGGTGTGTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ARMRLRLCTVGG*RLASVSAGVCH Trigger: GTGGCACACACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | AAGGGGGTTGAGGCCGTGAATGGGTCCAGTTCAACATaGCAGCCTGCCGACAGGGACTGCAACGTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KGVEAVNGSSST*QPADRDCNVAS Trigger: GGAGGCTACGTTGCAGTCCCTGTCGGCAGGCTGGCATGTTGAACTGGACCCATTCACGGCCTCAACCCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | ACTGCAGTAGGTTCAGCCGGTGAAGGCGCTTCTCAATaGTCCTCAGTCGCTGGAACCAGCGGGCTGTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TAVGSAGEGASQ*SSVAGTSGLCE Trigger: CTCGCACAGCCCGCTGGTTCCAGCGACTGAGGAGCATTGAGAAGCGCCTTCACCGGCTGAACCTACTGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | GGAACACAGCAAGGATGCGGCTCAGGTTATGCACAGTaGGTGGGTGGAGGTTGGCCTCGGTGTCAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GTQQGCGSGYAQ*VGGGWPRCQQV Trigger: CACCTGCTGACACCGAGGCCAACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS TCA 72 bp | CTCAGTCGCTGGAACCAGCGGGCTGTGCGAGGGAAGTaGCTGAAGAAGATCGGACTGGATGCTCCCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSRWNQRAVRGK*LKKIGLDAPRR Trigger: CCTTCTGGGAGCATCCAGTCCGATCTTCTTCAGTCACTTCCCTCGCACAGCCCGCTGGTTCCAGCGACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | AGAGTCCCAGGTACTCGGCCAGGAACACAGCAAGGATaGGGCTCAGGTTATGCACAGTGGGTGGGTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RVPGTRPGTQQG*GSGYAQWVGGG Trigger: ACCTCCACCCACCCACTGTGCATAACCTGAGCCGCATCCTTGCTGTGTTCCTGGCCGAGTACCTGGGACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CAA 72 bp | AAAAGCAGCTGCAGGGTCACCGGTGCTGCCTGCTGCTaGATTCTGCTCAGCATGGCATCAAGGGCCTGGACC | + |
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Preference number: 6 (lower is better) Translates to: KSSCRVTGAACC*ILLSMASRAWT Trigger: GGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CAA 90 bp | CCATCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTGCTGCTaGATTCTGCTCAGCATGGCATCAAGGGCCTGGACCAACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PSKKSSCRVTGAACC*ILLSMASRAWTNSR Trigger: TCTGGAGTTGGTCCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | AAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTGCTaGTTGATTCTGCTCAGCATGGCATCAAGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KKSSCRVTGAAC*LILLSMASRAW Trigger: CCAGGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | TCCAAGAAAAGCAGCTGCAGGGTCACCGGTGCTGCCTaGTGCTTGATTCTGCTCAGCATGGCATCAAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SKKSSCRVTGAA*CLILLSMASRA Trigger: GGCCCTTGATGCCATGCTGAGCAGAATCAAGCAGCAGGCAGCACCGGTGACCCTGCAGCTGCTTTTCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | CCCAGAAGGTCGAGGAGGACAAAGAGCTCAATAGCCTaGATCCTGGTGGGGCCAGGGCTGTGTGGTATAGAC | + |
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Preference number: 6 (lower is better) Translates to: PRRSRRTKSSIA*ILVGPGLCGID Trigger: GTCTATACCACACAGCCCTGGCCCCACCAGGATCCAGGCTATTGAGCTCTTTGTCCTCCTCGACCTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS GCA 72 bp | GGGTCCAGTTCAACATGCCAGCCTGCCGACAGGGACTaGAACGTAGCCTCCAGGAACTTTCTCACTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSSTCQPADRD*NVASRNFLTWR Trigger: TCTCCAAGTGAGAAAGTTCCTGGAGGCTACGTTGCAGTCCCTGTCGGCAGGCTGGCATGTTGAACTGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CAA 90 bp | GACAGGGACTGCAACGTAGCCTCCAGGAACTTTCTCACTTGGAGATaGCCAGAACTACCCGGGGGTCGCACAATCAATAAGGGACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DRDCNVASRNFLTWR*PELPGGRTINKGRR Trigger: CCTGCGTCCCTTATTGATTGTGCGACCCCCGGGTAGTTCTGGCAATCTCCAAGTGAGAAAGTTCCTGGAGGCTACGTTGCAGTCCCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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| CDS CCA 72 bp | AGGGACTGCAACGTAGCCTCCAGGAACTTTCTCACTTaGAGATTGCCAGAACTACCCGGGGGTCGCACAATC | + |
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Preference number: 6 (lower is better) Translates to: RDCNVASRNFLT*RLPELPGGRTI Trigger: GATTGTGCGACCCCCGGGTAGTTCTGGCAATCTCCAAGTGAGAAAGTTCCTGGAGGCTACGTTGCAGTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032566.3 |
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