Pregenerated sensors for QPCT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024084Ensembl transcript IDs: ENSMUST00000040789.6, ENSMUST00000233916.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATTCTACAGTTCGCTGATCACATATTCAAAAACACCTACAGAATaGATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: EFYSSLITYSKTPTE*IYRTEVYTHLSGSR Trigger: TCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGATTCATTCTGTAGGTGTTTTTGAATATGTGATCAGCGAACTGTAGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| 3UTR CCA 72 bp | GTCTACACACATTTATCTGGAAGCAGATTGTATAAATaGTGTCTTGAAGTTGCTGTAGAAGCAATTACCAGA | + |
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Preference number: 3 (lower is better) Translates to: VYTHLSGSRLYK*CLEVAVEAITR Trigger: TCTGGTAATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| 3UTR TCA 72 bp | AGTTCGCTGATCACATATTCAAAAACACCTACAGAATaGATCTATAGGACAGAAGTCTACACACATTTATCT | + |
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Preference number: 3 (lower is better) Translates to: SSLITYSKTPTE*IYRTEVYTHLS Trigger: AGATAAATGTGTGTAGACTTCTGTCCTATAGATTCATTCTGTAGGTGTTTTTGAATATGTGATCAGCGAACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTGACAGGACGGTCGCCTaGAGTAGCAGCAGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIDRTVA*SSSRWR Trigger: TCTCCACCTGCTGCTACTGCAGGCGACCGTCCTGTC...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTGGTGGTTCTTCTCCTaGGTCCAGGCAGCGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIWWFFS*VQAAET Trigger: GGTCTCCGCTGCCTGGACGCAGGAGAAGAACCACCA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTGCAGTAGCAGCAGGTaGAGAGTGCCCACGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWCSSSR*RVPTTS Trigger: GCTCGTCGTGGGCACTCTCCACCTGCTGCTACTGCA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTGCAGTAGCAGCAGGTaGAGAGTGCCCACGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAICSSSR*RVPTTS Trigger: GCTCGTCGTGGGCACTCTCCACCTGCTGCTACTGCA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTTGGTTGGTGCCTCTTaGTCCAGGAGGGTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAILVGAS*SRRVRA Trigger: AGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTTGGTTGGTGCCTCTTaGTCCAGGAGGGTGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWLVGAS*SRRVRA Trigger: AGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGGCAGCAGGTGGAGAGTaGCCACGACGAGCTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWAAGGE*PRRACL Trigger: AAGACAAGCTCGTCGTGGGCACTCTCCACCTGCTGC...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGATGATGTGCTTCTCCTaGGTCCAGGCAGCGGAGACC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWMMCFS*VQAAET Trigger: GGTCTCCGCTGCCTGGACGCAGGAGAAGCACATCAT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTGCACATGGCACAGCTaGATCCGTGGCTCCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWCTWHS*IRGSHK Trigger: TTTGTGGGAGCCACGGATTCAGCTGTGCCATGTGCA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTCTTGATCCAGGAGGGTaGGGGCTTGATGCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAILDPGG*GLDAIF Trigger: GAAGATGGCATCAAGCCCTCACCCTCCTGGATCAAG...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGCTTGATCCAGGAGGGTaGGGGCTTGATGCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWLDPGG*GLDAIF Trigger: GAAGATGGCATCAAGCCCTCACCCTCCTGGATCAAG...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTGTGCTGGTTGGTGGTaGTTCTTCTCCTGCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWCAGWW*FFSCVQ Trigger: CTGGACGCAGGAGAAGAACCACCACCAACCAGCACA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTGCACAGCTGAATCCGTaGCTCCCACAAACACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIAQLNP*LPQTLC Trigger: GCAGAGTGTTTGTGGGAGCCACGGATTCAGCTGTGC...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGGCACAGCTGAATCCGTaGCTCCCACAAACACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWAQLNP*LPQTLC Trigger: GCAGAGTGTTTGTGGGAGCCACGGATTCAGCTGTGC...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTGCCATCCAGTTGGTTaGTGCCTCTTGATCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAICHPVG*CLLIQE Trigger: CTCCTGGATCAAGAGGCACCAACCAACTGGATGGCA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTGCCATCCAGTTGGTTaGTGCCTCTTGATCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWCHPVG*CLLIQE Trigger: CTCCTGGATCAAGAGGCACCAACCAACTGGATGGCA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGATTCGTTGCATGATGTaGTTCTCCTGCGTCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWIRCMM*FSCVQA Trigger: TGCCTGGACGCAGGAGAAGCACATCATGCAACGAAT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGAAATGTGCTGGTTGGTaGTGGTTCTTCTCCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWKCAGW*WFFSCV Trigger: GACGCAGGAGAAGAACCACCACCAACCAGCACATTT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTCTGAATTCGTTGCATaGTGTGCTGCCGAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWSEFVA*CAAEQN Trigger: ATTCTGCTCGGCAGCACATCATGCAACGAATTCAGA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTGGAGAAGCTATCAGGTaGAGAACTGGGACACCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIGEAIR*RTGTPF Trigger: AAAAGGTGTCCCAGTTCTTCACCTGATAGCTTCTCC...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTTGTCATCCATGGTGTaGCAGACTTCAGGGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWLSSMV*QTSGKG Trigger: TCCTTTCCCTGAAGTCTGGCACACCATGGATGACAA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTTCAAATGTGCTGGTTaGTGGTGGTTCTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWFKCAG*WWFFSC Trigger: GCAGGAGAAGAACCACCACCAACCAGCACATTTGAA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTATCGAGGAAAATATTTaGAGTCGTAGTGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIIEENI*SRSGRR Trigger: TCGCCTGCCACTACGACTCCAAATATTTTCCTCGAT...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGATCGAGGAAAATATTTaGAGTCGTAGTGGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWIEENI*SRSGRR Trigger: TCGCCTGCCACTACGACTCCAAATATTTTCCTCGAT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| 3UTR CAA 72 bp | AGGACAGAAGTCTACACACATTTATCTGGAAGCAGATaGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: RTEVYTHLSGSR*YKWCLEVAVEA Trigger: TGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGAGTGCTGATGATATTTaGGAAGGACCGATAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWSADDI*EGPIAI Trigger: TATGGCTATCGGTCCTTCTCAAATATCATCAGCACT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTAGTGCTGATGATATTTaGGAAGGACCGATAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAISADDI*EGPIAI Trigger: TATGGCTATCGGTCCTTCTCAAATATCATCAGCACT...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGAGAATTCAAATGTGCTaGTTGGTGGTGGTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWRIQMC*LVVVLL Trigger: GAGAAGAACCACCACCAACCAGCACATTTGAATTCT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTAACTTGCTGAAGAGATaGAGAATTCAAATGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAINLLKR*RIQMCW Trigger: CCAGCACATTTGAATTCTTCATCTCTTCAGCAAGTT...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTCCTTCTGCAACTTGCTaGAGAGATGAAGAATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIPSATC*RDEEFK Trigger: TTTGAATTCTTCATCTCTTCAGCAAGTTGCAGAAGG...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR TCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTTCCTCTCCAAAGAATaGTCCTTGAGTAATCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIFLSKE*SLSNPN Trigger: ATTGGGATTACTCAAGGATCATTCTTTGGAGAGGAA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR TCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTTCCTCTCCAAAGAATaGTCCTTGAGTAATCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWFLSKE*SLSNPN Trigger: ATTGGGATTACTCAAGGATCATTCTTTGGAGAGGAA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR GCA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGGGTCTCAAGTCGTTTTaGCACATTTCAGAAATGCTA | + |
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Preference number: 4 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWGLKSF*HISEML Trigger: TAGCATTTCTGAAATGTGGCAAAACGACTTGAGACC...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CCA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTACATCCTTCAAGGAATaGAGTTTCTTGTCTAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRLYKWCLEVAVEAITSFKE*SFLSKA Trigger: TGCCTTAGACAAGAAACTCCATTCCTTGAAGGATGT...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS GCA 90 bp | GAGACCAGACTCAGATTCCCAGCTGTCAGAGACAGGACGGTCGCCTaGAGTAGCAGCAGGTGGAGAGTGCCCACGACGAGCTTGTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: ETRLRFPAVRDRTVA*SSSRWRVPTTSLSS Trigger: CGAAGACAAGCTCGTCGTGGGCACTCTCCACCTGCTGCTACTGCAGGCGACCGTCCTGTCTCTGACAGCTGGGAATCTGAGTCTGGTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 90 bp | CCGTGGCTCCCACAAACACTCTGCTGTCCCATCGAGGAAAATATTTaGAGTCGTAGTGGCAGGCGAGGACCAGGTGTCGTTTCGCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: PWLPQTLCCPIEENI*SRSGRRGPGVVSLP Trigger: CGGAAGCGAAACGACACCTGGTCCTCGCCTGCCACTACGACTCCAAATATTTTCCTCGATGGGACAGCAGAGTGTTTGTGGGAGCCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS TCA 90 bp | CAACTTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTTGCATaGTGTGCTTCTCCTGCGTCCAGGCAGCGGAGACCAGACTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: QLPRPTQPEVSEFVA*CASPASRQRRPDSD Trigger: ATCTGAGTCTGGTCTCCGCTGCCTGGACGCAGGAGAAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS TCA 90 bp | CAACTTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTTGCATaGTGTGCTGCCGAGCAGAATAGCTTCCGGGCGATCCAGGATATC | + |
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Preference number: 5 (lower is better) Translates to: QLPRPTQPEVSEFVA*CAAEQNSFRAIQDI Trigger: GATATCCTGGATCGCCCGGAAGCTATTCTGCTCGGCAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS GCA 90 bp | AGAGATGAAGAATTCAAATGTGCTGGTTGGTGGTGGTTCTTCTCCTaGGTCCAGGCAGCGGAGACCAGACTCAGATTCCCAGCTGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RDEEFKCAGWWWFFS*VQAAETRLRFPAVR Trigger: TCTGACAGCTGGGAATCTGAGTCTGGTCTCCGCTGCCTGGACGCAGGAGAAGAACCACCACCAACCAGCACATTTGAATTCTTCATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS TCA 90 bp | GACCAGGTGTCGTTTCGCTTCCGGGTTAAGAGTGCTGATGATATTTaGGAAGGACCGATAGCCATAGGGAGTCCTACTCAGGAAGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: DQVSFRFRVKSADDI*EGPIAIGSPTQEGV Trigger: GACACCTTCCTGAGTAGGACTCCCTATGGCTATCGGTCCTTCTCAAATATCATCAGCACTCTTAACCCGGAAGCGAAACGACACCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 90 bp | CACGGGCAAGTTCCAACATCATTGCACATGGCACAGCTGAATCCGTaGCTCCCACAAACACTCTGCTGTCCCATCGAGGAAAATATTTGG | + |
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Preference number: 5 (lower is better) Translates to: HGQVPTSLHMAQLNP*LPQTLCCPIEENIW Trigger: CCAAATATTTTCCTCGATGGGACAGCAGAGTGTTTGTGGGAGCCACGGATTCAGCTGTGCCATGTGCAATGATGTTGGAACTTGCCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS GCA 90 bp | TTAAATCTAGTAAGACCAACAGATCCATGCCATCCAGTTGGTTGGTaGCTCTTGATCCAGGAGGGTGAGGGCTTGATGCCATCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LNLVRPTDPCHPVGW*LLIQEGEGLMPSSE Trigger: CTCAGAAGATGGCATCAAGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAACTGGATGGCATGGATCTGTTGGTCTTACTAGATTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 90 bp | CGGAGTGAGAGATCTGGCTTGGAACCAGAGACATCCTTCAAGGAATaGAGTTTCTTGTCTAAGGCACGGGCAAGTTCCAACATCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSERSGLEPETSFKE*SFLSKARASSNIIA Trigger: TGCAATGATGTTGGAACTTGCCCGTGCCTTAGACAAGAAACTCCATTCCTTGAAGGATGTCTCTGGTTCCAAGCCAGATCTCTCACTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTGTTGGTTGGTGCCTCTaGATCCAGGAGGGTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIVGWCL*IQEGEG Trigger: GCCCTCACCCTCCTGGATCAAGAGGCACCAACCAAC...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS TCA 90 bp | TCGTTTTGCCACATTTCAGAAATGCTAGTGCCTTCTGCAACTTGCTaGAGAGATGAAGAATTCAAATGTGCTGGTTGGTGGTGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFCHISEMLVPSATC*RDEEFKCAGWWWFF Trigger: GAAGAACCACCACCAACCAGCACATTTGAATTCTTCATCTCTTCAGCAAGTTGCAGAAGGCACTAGCATTTCTGAAATGTGGCAAAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CCA 90 bp | GATTGTCAATGGTTGACGCATGTAGATTTTCTTCATTGTCATCCATaGTGTGCCAGACTTCAGGGAAAGGAGAAGCTATCAGGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: DCQWLTHVDFLHCHP*CARLQGKEKLSGEE Trigger: TTCTTCACCTGATAGCTTCTCCTTTCCCTGAAGTCTGGCACACCATGGATGACAATGAAGAAAATCTACATGCGTCAACCATTGACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTCAGGAGGGTGAGGGCTaGATGCCATCTTCTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIQEGEG*MPSSEL Trigger: TAGCTCAGAAGATGGCATCAAGCCCTCACCCTCCTG...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGCAGGAGGGTGAGGGCTaGATGCCATCTTCTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWQEGEG*MPSSEL Trigger: TAGCTCAGAAGATGGCATCAAGCCCTCACCCTCCTG...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGATGCCATCCAGTTGGTaGGTGCCTCTTGATCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWMPSSW*VPLDPG Trigger: TCCTGGATCAAGAGGCACCAACCAACTGGATGGCAT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGAAGTCTCTGAATTCGTaGCATGATGTGCTGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWKSLNS*HDVLPS Trigger: GCTCGGCAGCACATCATGCAACGAATTCAGAGACTT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGAAGGAATGGAGTTTCTaGTCTAAGGCACGGGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWKEWSF*SKARAS Trigger: ACTTGCCCGTGCCTTAGACAAGAAACTCCATTCCTT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGCAAGTTCCAACATCATaGCACATGGCACAGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWQVPTS*HMAQLN Trigger: ATTCAGCTGTGCCATGTGCAATGATGTTGGAACTTG...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTCAAGTTCCAACATCATaGCACATGGCACAGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIQVPTS*HMAQLN Trigger: ATTCAGCTGTGCCATGTGCAATGATGTTGGAACTTG...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTAAGTCTCTGAATTCGTaGCATGATGTGCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIKSLNS*HDVLLL Trigger: CAGGAGAAGCACATCATGCAACGAATTCAGAGACTT...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | TTATCTGGAAGCAGATTGTATAAATGGTGTCTTGAAGTTGCTGTAGAAGCAATTTGGTCTCAAGTCGTTTaGCCACATTTCAGAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGSRLYKWCLEVAVEAIWSQVV*PHFRNA Trigger: AGCATTTCTGAAATGTGGCAAAACGACTTGAGACCA...AATTGCTTCTACAGCAACTTCAAGACACCATTTATACAATCTGCTTCCAGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGTGTAGATTTTCTTCATaGTCATCCATGGTGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWCRFSS*SSMVCQ Trigger: CTGGCACACCATGGATGACAATGAAGAAAATCTACA...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS-3UTR CAA 90 bp | ATCTATAGGACAGAAGTCTACACACATTTATCTGGAAGCAGATTGTATAAATGGATGATTTTGTTGAGATaGTCAATGGTTGACGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: IYRTEVYTHLSGSRLYKWMILLR*SMVDAC Trigger: ACATGCGTCAACCATTGACAATCTCAACAAAATCAT...CCATTTATACAATCTGCTTCCAGATAAATGTGTGTAGACTTCTGTCCTATAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS GCA 72 bp | CTCAGATTCCCAGCTGTCAGAGACAGGACGGTCGCCTaGAGTAGCAGCAGGTGGAGAGTGCCCACGACGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRFPAVRDRTVA*SSSRWRVPTTS Trigger: GCTCGTCGTGGGCACTCTCCACCTGCTGCTACTGCAGGCGACCGTCCTGTCTCTGACAGCTGGGAATCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | GTCAGAGACAGGACGGTCGCCTGCAGTAGCAGCAGGTaGAGAGTGCCCACGACGAGCTTGTCTTCGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRDRTVACSSSR*RVPTTSLSSLP Trigger: AGGCAGCGAAGACAAGCTCGTCGTGGGCACTCTCCACCTGCTGCTACTGCAGGCGACCGTCCTGTCTCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS TCA 72 bp | CGACCCACTCAGCCTGAAGTCTCTGAATTCGTTGCATaGTGTGCTTCTCCTGCGTCCAGGCAGCGGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RPTQPEVSEFVA*CASPASRQRRP Trigger: TGGTCTCCGCTGCCTGGACGCAGGAGAAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS CAA 90 bp | GGTGTCAACTTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTaGCATGATGTGCTGCCGAGCAGAATAGCTTCCGGGCGATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVNFHDPLSLKSLNS*HDVLPSRIASGRSR Trigger: CCTGGATCGCCCGGAAGCTATTCTGCTCGGCAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAAGTTGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CAA 90 bp | GGTGTCAACTTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTaGCATGATGTGCTTCTCCTGCGTCCAGGCAGCGGAGACCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: GVNFHDPLSLKSLNS*HDVLLLRPGSGDQT Trigger: AGTCTGGTCTCCGCTGCCTGGACGCAGGAGAAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAAGTTGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS TCA 72 bp | CGACCCACTCAGCCTGAAGTCTCTGAATTCGTTGCATaGTGTGCTGCCGAGCAGAATAGCTTCCGGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: RPTQPEVSEFVA*CAAEQNSFRAI Trigger: GATCGCCCGGAAGCTATTCTGCTCGGCAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CAA 72 bp | TTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTaGCATGATGTGCTTCTCCTGCGTCCAGGCAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: FHDPLSLKSLNS*HDVLLLRPGSG Trigger: TCCGCTGCCTGGACGCAGGAGAAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233916.2 |
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| CDS TCA 72 bp | ACGGGCAAGTTCCAACATCATTGCACATGGCACAGCTaGATCCGTGGCTCCCACAAACACTCTGCTGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGKFQHHCTWHS*IRGSHKHSAVP Trigger: TGGGACAGCAGAGTGTTTGTGGGAGCCACGGATTCAGCTGTGCCATGTGCAATGATGTTGGAACTTGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS GCA 72 bp | GAATTCAAATGTGCTGGTTGGTGGTGGTTCTTCTCCTaGGTCCAGGCAGCGGAGACCAGACTCAGATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EFKCAGWWWFFS*VQAAETRLRFP Trigger: TGGGAATCTGAGTCTGGTCTCCGCTGCCTGGACGCAGGAGAAGAACCACCACCAACCAGCACATTTGAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CAA 72 bp | TTCCACGACCCACTCAGCCTGAAGTCTCTGAATTCGTaGCATGATGTGCTGCCGAGCAGAATAGCTTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FHDPLSLKSLNS*HDVLPSRIASG Trigger: CCCGGAAGCTATTCTGCTCGGCAGCACATCATGCAACGAATTCAGAGACTTCAGGCTGAGTGGGTCGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CAA 72 bp | CCAACAGATCCATGCCATCCAGTTGGTTGGTGCCTCTaGATCCAGGAGGGTGAGGGCTTGATGCCATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PTDPCHPVGWCL*IQEGEGLMPSS Trigger: AGAAGATGGCATCAAGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAACTGGATGGCATGGATCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | CCACAAACACTCTGCTGTCCCATCGAGGAAAATATTTaGAGTCGTAGTGGCAGGCGAGGACCAGGTGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PQTLCCPIEENI*SRSGRRGPGVV Trigger: AACGACACCTGGTCCTCGCCTGCCACTACGACTCCAAATATTTTCCTCGATGGGACAGCAGAGTGTTTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | GTTCCAACATCATTGCACATGGCACAGCTGAATCCGTaGCTCCCACAAACACTCTGCTGTCCCATCGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPTSLHMAQLNP*LPQTLCCPIEE Trigger: TTCCTCGATGGGACAGCAGAGTGTTTGTGGGAGCCACGGATTCAGCTGTGCCATGTGCAATGATGTTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | CTAGTAAGACCAACAGATCCATGCCATCCAGTTGGTTaGTGCCTCTTGATCCAGGAGGGTGAGGGCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVRPTDPCHPVG*CLLIQEGEGLM Trigger: CATCAAGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAACTGGATGGCATGGATCTGTTGGTCTTACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CAA 90 bp | CTAGTAAGACCAACAGATCCATGCCATCCAGTTGGTTGGTGCCTCTaGATCCAGGAGGGTGAGGGCTTGATGCCATCTTCTGAGCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LVRPTDPCHPVGWCL*IQEGEGLMPSSELS Trigger: ACTTAGCTCAGAAGATGGCATCAAGCCCTCACCCTCCTGGATCAAGAGGCACCAACCAACTGGATGGCATGGATCTGTTGGTCTTACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS TCA 72 bp | TCGTTTCGCTTCCGGGTTAAGAGTGCTGATGATATTTaGGAAGGACCGATAGCCATAGGGAGTCCTACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SFRFRVKSADDI*EGPIAIGSPTQ Trigger: CTGAGTAGGACTCCCTATGGCTATCGGTCCTTCTCAAATATCATCAGCACTCTTAACCCGGAAGCGAAACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | AGATCTGGCTTGGAACCAGAGACATCCTTCAAGGAATaGAGTTTCTTGTCTAAGGCACGGGCAAGTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RSGLEPETSFKE*SFLSKARASSN Trigger: GTTGGAACTTGCCCGTGCCTTAGACAAGAAACTCCATTCCTTGAAGGATGTCTCTGGTTCCAAGCCAGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CAA 90 bp | AGATCTGGCTTGGAACCAGAGACATCCTTCAAGGAATGGAGTTTCTaGTCTAAGGCACGGGCAAGTTCCAACATCATTGCACATGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSGLEPETSFKEWSF*SKARASSNIIAHGT Trigger: TGTGCCATGTGCAATGATGTTGGAACTTGCCCGTGCCTTAGACAAGAAACTCCATTCCTTGAAGGATGTCTCTGGTTCCAAGCCAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CAA 90 bp | GGGCGATCCAGGATATCGTTCTATCAGCAATGGTCTCAAGTCGTTTaGCCACATTTCAGAAATGCTAGTGCCTTCTGCAACTTGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRSRISFYQQWSQVV*PHFRNASAFCNLLK Trigger: CTTCAGCAAGTTGCAGAAGGCACTAGCATTTCTGAAATGTGGCAAAACGACTTGAGACCATTGCTGATAGAACGATATCCTGGATCGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS GCA 72 bp | CTGCTCCAATTAAATCTAGTAAGACCAACAGATCCATaGCATCCAGTTGGTTGGTGCCTCTTGATCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQLNLVRPTDP*HPVGWCLLIQE Trigger: CTCCTGGATCAAGAGGCACCAACCAACTGGATGGCATGGATCTGTTGGTCTTACTAGATTTAATTGGAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CAA 72 bp | TTGGAACCAGAGACATCCTTCAAGGAATGGAGTTTCTaGTCTAAGGCACGGGCAAGTTCCAACATCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEPETSFKEWSF*SKARASSNIIA Trigger: TGCAATGATGTTGGAACTTGCCCGTGCCTTAGACAAGAAACTCCATTCCTTGAAGGATGTCTCTGGTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CAA 72 bp | CCATCAAAGAAAATTAGCCGGAGTGAGAGATCTGGCTaGGAACCAGAGACATCCTTCAAGGAATGGAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSKKISRSERSG*EPETSFKEWSF Trigger: GAAACTCCATTCCTTGAAGGATGTCTCTGGTTCCAAGCCAGATCTCTCACTCCGGCTAATTTTCTTTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS CCA 72 bp | TGGTTGACGCATGTAGATTTTCTTCATTGTCATCCATaGTGTGCCAGACTTCAGGGAAAGGAGAAGCTATCA | + |
|
Preference number: 6 (lower is better) Translates to: WLTHVDFLHCHP*CARLQGKEKLS Trigger: TGATAGCTTCTCCTTTCCCTGAAGTCTGGCACACCATGGATGACAATGAAGAAAATCTACATGCGTCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040789.6 ENSMUST00000233916.2 |
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| CDS TCA 72 bp | CACATTTCAGAAATGCTAGTGCCTTCTGCAACTTGCTaGAGAGATGAAGAATTCAAATGTGCTGGTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HISEMLVPSATC*RDEEFKCAGWW Trigger: CCACCAACCAGCACATTTGAATTCTTCATCTCTTCAGCAAGTTGCAGAAGGCACTAGCATTTCTGAAATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS GCA 72 bp | GGATATCGTTCTATCAGCAATGGTCTCAAGTCGTTTTaGCACATTTCAGAAATGCTAGTGCCTTCTGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: GYRSISNGLKSF*HISEMLVPSAT Trigger: AGTTGCAGAAGGCACTAGCATTTCTGAAATGTGGCAAAACGACTTGAGACCATTGCTGATAGAACGATATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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| CDS CAA 72 bp | AGGATATCGTTCTATCAGCAATGGTCTCAAGTCGTTTaGCCACATTTCAGAAATGCTAGTGCCTTCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RISFYQQWSQVV*PHFRNASAFCN Trigger: GTTGCAGAAGGCACTAGCATTTCTGAAATGTGGCAAAACGACTTGAGACCATTGCTGATAGAACGATATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040789.6 |
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