Pregenerated sensors for QK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062078Ensembl transcript IDs: ENSMUST00000042296.9, ENSMUST00000097414.11, ENSMUST00000233645.2, ENSMUST00000233684.2, ENSMUST00000233828.2
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTGGAAGCTGAGAGCCCTAACTCCTCAGGAACAAGAGCTTCTGTaGGTGCGGCAGAGAGGAGTTCTGGGGAAGGAGCATGCACGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SWKLRALTPQEQELL*VRQRGVLGKEHARG Trigger: CCCCCGTGCATGCTCCTTCCCCAGAACTCCTCTCTGCCGCACTCACAGAAGCTCTTGTTCCTGAGGAGTTAGGGCTCTCAGCTTCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| 3UTR GCA 90 bp | CTCCTCTTTGCCCACTCACTACATACAGCACCTCCTGCCCACATCTaGCTACCATGGATTAGTTGCTGCTCCTCCTCTCCCACCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLFAHSLHTAPPAHI*LPWISCCSSSPTPG Trigger: GCCAGGGGTGGGAGAGGAGGAGCAGCAACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGCAAAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CCA 90 bp | GCCATCTGTCTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTaGGGTGGGGCATTGAGAGATGATCAGTGCTGTGGGATGAATCGG | + |
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Preference number: 1 (lower is better) Translates to: AICLPFLREAFLPFA*GGALRDDQCCGMNR Trigger: CCGATTCATCCCACAGCACTGATCATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAGACAGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR TCA 90 bp | CCTGCTGACCTTGACTGTGAAGCCATGAGGGTATGGAAGAGGGCATaGGTTGATGAGCCAGGAGTCCACAATCACTTGAGATTTGCCACA | + |
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Preference number: 1 (lower is better) Translates to: PADLDCEAMRVWKRA*VDEPGVHNHLRFAT Trigger: TGTGGCAAATCTCAAGTGATTGTGGACTCCTGGCTCATCAACTCATGCCCTCTTCCATACCCTCATGGCTTCACAGTCAAGGTCAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR TCA 90 bp | AAGAGAGGCCTTCTTACCGTTCGCTTGGGGTGGGGCATTGAGAGATaGTCAGTGCTGTGGGATGAATCGGGCCTTATTGCTTTACTACTA | + |
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Preference number: 1 (lower is better) Translates to: KRGLLTVRLGWGIER*SVLWDESGLIALLL Trigger: TAGTAGTAAAGCAATAAGGCCCGATTCATCCCACAGCACTGATCATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAGGCCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR TCA 90 bp | CCCAAGTCACAGTATCTCACGAGCTCTATTAGAACCAGACGTGTCTaGGCTTTACTAGTCACATATTCACTGAAGTGCCTTTCTTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: PKSQYLTSSIRTRRV*ALLVTYSLKCLSCS Trigger: GCTGCAAGAAAGGCACTTCAGTGAATATGTGACTAGTAAAGCTCAGACACGTCTGGTTCTAATAGAGCTCGTGAGATACTGTGACTTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| 3UTR TCA 90 bp | ATTGTTTGTGGTATGTATGAGCTTCACATGCCATGGCTCACATGCTaGACACAGCTCTGGTTCTTTCCTCCTTCTATGGGTCACAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: IVCGMYELHMPWLTC*TQLWFFPPSMGHRD Trigger: ATCTCTGTGACCCATAGAAGGAGGAAAGAACCAGAGCTGTGTTCAGCATGTGAGCCATGGCATGTGAAGCTCATACATACCACAAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR GCA 90 bp | ACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: TLLINKNCRTKLTSV*GHNPLVRMDTHIVP Trigger: AGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| 3UTR TCA 90 bp | ATTCATTTCAAACAGGTTGGCCTTCTACCTACTTCACCTCTTCATTaGCAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGAACCA | + |
|
Preference number: 1 (lower is better) Translates to: IHFKQVGLLPTSPLH*QSPSHSISRALLEP Trigger: TGGTTCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAAGTAGGTAGAAGGCCAACCTGTTTGAAATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| 3UTR TCA 90 bp | TGCAGTATGATGCAGCTTCAAAGTATCTATGAGACTGCCCACATCTaGAGTAACCTTTCCCATCTAACTTCCTCATCTCTATGCGACTCT | + |
|
Preference number: 1 (lower is better) Translates to: CSMMQLQSIYETAHI*SNLSHLTSSSLCDS Trigger: AGAGTCGCATAGAGATGAGGAAGTTAGATGGGAAAGGTTACTTCAGATGTGGGCAGTCTCATAGATACTTTGAAGCTGCATCATACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| 3UTR GCA 90 bp | GATTTAAAAAGTCTTTTATTGTTTGTGGTATGTATGAGCTTCACATaGCATGGCTCACATGCTGAACACAGCTCTGGTTCTTTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: DLKSLLLFVVCMSFT*HGSHAEHSSGSFLL Trigger: AAGGAGGAAAGAACCAGAGCTGTGTTCAGCATGTGAGCCATGGCATGTGAAGCTCATACATACCACAAACAATAAAAGACTTTTTAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CCA 90 bp | GTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTTaGACACCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: VDSYIFPSGLVLQTF*TPSTLLINKNCRTK Trigger: TTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| 3UTR CCA 90 bp | CCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTaGTCTCTCAAGGTGCATCATTACAGTAAATTTCTTGACTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: PVHRNLGKRLNKESN*SLKVHHYSKFLDSL Trigger: TAAAGAGTCAAGAAATTTACTGTAATGATGCACCTTGAGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | CCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTGGGGTGGGGCATaGAGAGATGATCAGTGCTGTGGGATGAATCGGGCCTTATTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PFLREAFLPFAWGGA*RDDQCCGMNRALLL Trigger: AAGCAATAAGGCCCGATTCATCCCACAGCACTGATCATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTaGAGCTCCTCTTTGCCCACTCACTACATACAGCACCTCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLASISPGDSKLQVM*SSSLPTHYIQHLLP Trigger: GGGCAGGAGGTGCTGTATGTAGTGAGTGGGCAAAGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTACGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLRLPVN*SAGRHG Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTCCATGGATTAGTTGCTaGTCCTCCTCTCCCACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LASISPGDSKLQVMLSSSPWISC*SSSPTP Trigger: AGGGGTGGGAGAGGAGGAGCAGCAACTAATCCATGG...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | ATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTTaGCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: ISPGDSKLQVMLSSS*PTHYIQHLLPTSAY Trigger: GTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGCAAAGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR TCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTAATCAGTGCTGTGGGATaGATCGGGCCTTATTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLISAVG*IGPYCF Trigger: AAAGCAATAAGGCCCGATTCATCCCACAGCACTGAT...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTTGAGAGATGATCAGTaGTGTGGGATGAATCGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: VLASISPGDSKLQVMLSSLRDDQ*CGMNRA Trigger: GGCCCGATTCATCCCACAGCACTGATCATCTCTCAA...GGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTTGTTTGTCTCTGCCGTaGTTCCTGTGTAGTTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: AHSLHTAPPAHICLPWISCLSLP*FLCSCL Trigger: TAGACAACTACACAGGAAGCACGGCAGAGACAAACA...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR CCA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGATGCTCCCATCTCCACTaGCACTTACCCTCCATGGTA | + |
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Preference number: 2 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRCSHLH*HLPSMV Trigger: TACCATGGAGGGTAAGTGCCAGTGGAGATGGGAGCA...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | CACTTCCCCAACGACATCCCTGACCGAAGGTTCATGCATGATGCATaGTCACACAGTACATTCAGAGAGAGCTTTGACTTCGCTAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: HFPNDIPDRRFMHDA*SHSTFRESFDFARR Trigger: TCTCCTAGCGAAGTCAAAGCTCTCTCTGAATGTACTGTGTGACAATGCATCATGCATGAACCTTCGGTCAGGGATGTCGTTGGGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACACTCCCTTGGACCCAGTaGGTACATGTGGTGATCGTG | + |
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Preference number: 2 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTLPWTQ*VHVVIV Trigger: CACGATCACCACATGTACTCACTGGGTCCAAGGGAG...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKLSSLH*RQASKG Trigger: GCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAG...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTAGTTTGATTCAGCATTaGGCACCAGCTATACACACA | + |
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Preference number: 2 (lower is better) Translates to: AHSLHTAPPAHICLPWISSLIQH*APAIHT Trigger: TGTGTGTATAGCTGGTGCTCAATGCTGAATCAAACT...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGGGCAGAGAGGAGTTCTaGGGAAGGAGCATGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGGREEF*GRSMHG Trigger: CCCGTGCATGCTCCTTCCCCAGAACTCCTCTCTGCC...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| 3UTR CAA 90 bp | GGGGCATTGAGAGATGATCAGTGCTGTGGGATGAATCGGGCCTTATaGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: GALRDDQCCGMNRAL*LYYYSVQVLEPLSP Trigger: GGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGCCCGATTCATCCCACAGCACTGATCATCTCTCAATGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAACTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKLSSLH*RQASKG Trigger: GCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAG...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAAAGTGCCTCAGCTCGCTaGACTGACGACAGGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKSASAR*TDDRQA Trigger: TGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACT...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTGGAGAGGAGAAAGAATaGAGCAGAGCAGTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LASISPGDSKLQVMLSSSGEEKE*SRAVTE Trigger: TTCAGTGACTGCTCTGCTCCATTCTTTCTCCTCTCC...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAACTTTAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: KNCRTKLTSVCGHNP*VRMDTHIVPSNFSS Trigger: GCTACTAAAGTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGAACAAGAGCTTCTGTaGGTGCGGCAGAGAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: INKNCRTKLTSVCGHNPLEQELL*VRQRGV Trigger: AACTCCTCTCTGCCGCACTCACAGAAGCTCTTGTTC...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTCATCATCAGGCTGTGTaGTACTACTGCACTTACATG | + |
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Preference number: 2 (lower is better) Translates to: LASISPGDSKLQVMLSSSHHQAV*YYCTYM Trigger: CATGTAAGTGCAGTAGTATCACACAGCCTGATGATG...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKGGGSV*GHNPLV Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
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| 3UTR-3UTR GCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCAGTGCCTCAGCTCGCTaGACTGACGACAGGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SITHKRHTSTVLHICFLPSASAR*TDDRQA Trigger: TGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACT...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTTTTCTTGACTCTTTATaGTGTGAGCAGAGAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: AHSLHTAPPAHICLPWISFLDSL*CEQRVI Trigger: AATCACTCTCTGCTCACAGCATAAAGAGTCAAGAAA...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTATAAGGAGTGTATTGTaGTTCAGTTTGACCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: AHSLHTAPPAHICLPWISIRSVL*FSLTSL Trigger: CAAACTGGTCAAACTGAAGCACAATACACTCCTTAT...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | ACTGCTAGGCTAAGGTTTTTCCCGGAGGCTGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: TARLRFFPEAAETKH*LNSDLMRVRLRPFL Trigger: CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGTCTCAGCAGCCTCCGGGAAAAACCTTAGCCTAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCGAGATATTCCGTATGTaGAGGACCAAAAATGATCAG | + |
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Preference number: 2 (lower is better) Translates to: VLASISPGDSKLQVMLSSEIFRM*RTKNDQ Trigger: CTGATCATTTTTGGTCCTGCACATACGGAATATCTC...GGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTGTCAGGAGCAGCAGCTaGAAGCTGAGAGCCCTAACT | + |
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Preference number: 2 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLVRSSS*KLRALT Trigger: AGTTAGGGCTCTCAGCTTCCAGCTGCTGCTCCTGAC...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAAATCAGCAGGCAGGCATaGTCAGGTCATCATTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKISRQA*SGHHWV Trigger: CACCCAATGATGACCTGACCATGCCTGCCTGCTGAT...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTGGGGAAAAGCTGAGTTaGAGGACAATTTCTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LASISPGDSKLQVMLSSSGEKLS*RTISLS Trigger: AGACAAAGAAATTGTCCTCCAACTCAGCTTTTCCCC...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| 3UTR CAA 90 bp | CATTCATTTCAAACAGGTTGGCCTTCTACCTACTTCACCTCTTCATaGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGAACC | + |
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Preference number: 2 (lower is better) Translates to: HSFQTGWPSTYFTSS*TVPKSQYLTSSIRT Trigger: GGTTCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAAGTAGGTAGAAGGCCAACCTGTTTGAAATGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| 3UTR-3UTR TCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGACTTCACCTCTTCATTaGCAGTCCCCAAGTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: INKNCRTKLTSVCGHNPLTSPLH*QSPSHS Trigger: ACTGTGACTTGGGGACTGTCAATGAAGAGGTGAAGT...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAGCTTCAAAGTATCTATaGGACTGCCCACATCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTASKYL*DCPHLK Trigger: CTTCAGATGTGGGCAGTCTCATAGATACTTTGAAGC...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 90 bp | TTTCCATCAGGTCTGGTGTTGCAAACTTTTTGGACACCCAGCACATaGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FPSGLVLQTFWTPST*LINKNCRTKLTSVC Trigger: GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACACCAGACCTGATGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCAGAACCAGACGTGTCTaGGCTTTACTAGTCACATAT | + |
|
Preference number: 2 (lower is better) Translates to: PSTLLINKNCRTKLTSVCRTRRV*ALLVTY Trigger: ATATGTGACTAGTAAAGCTCAGACACGTCTGGTTCT...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACAGGTCATCATTGGGTaGAGAGTTCAGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKQVIIG*RVQRSE Trigger: TTCTGACCTCTGAACTCTTCACCCAATGATGACCTG...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAACGATTACCAGTTAACTaGTCAGCAGGCAGGCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKRLPVN*SAGRHG Trigger: ACCATGCCTGCCTGCTGATCAGTTAACTGGTAATCG...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGTGGGGCATTGAGAGATaGTCAGTGCTGTGGGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLWGIER*SVLWDE Trigger: TTCATCCCACAGCACTGATCATCTCTCAATGCCCCA...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATGGGGCATTGAGAGATaGTCAGTGCTGTGGGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKWGIER*SVLWDE Trigger: TTCATCCCACAGCACTGATCATCTCTCAATGCCCCA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAAAACTGCCTCTGTCACTaGGTAGTTAGGGCCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKNCLCH*VVRAIC Trigger: ACAGATGGCCCTAACTACTCAGTGACAGAGGCAGTT...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCACATATTCACTGAAGTaGCTTTCTTGCAGCAGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PSTLLINKNCRTKLTSVCTYSLK*LSCSRT Trigger: AGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGT...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCTTGAGAGATGATCAGTaGTGTGGGATGAATCGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SITHKRHTSTVLHICFLPLRDDQ*CGMNRA Trigger: GGCCCGATTCATCCCACAGCACTGATCATCTCTCAA...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATTCTTACCGTTCGCTTaGGGTGGGGCATTGAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKFLPFA*GGALRD Trigger: ATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCACTTACATGAAAATGTaGCATACCACACTATTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VLASISPGDSKLQVMLSSTYMKM*HTTLFA Trigger: TGCAAATAGTGTGGTATGCCACATTTTCATGTAAGT...GGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAATATTCTCAACTATCTaGAGGCTCTGGAGTACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTIFSTI*RLWSTK Trigger: CTTTGTACTCCAGAGCCTTCAGATAGTTGAGAATAT...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTCAGGTCATCATTGGGTaGAGAGTTCAGAGGTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSQVIIG*RVQRSE Trigger: TTCTGACCTCTGAACTCTTCACCCAATGATGACCTG...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTATCAGTGCTGTGGGATaGATCGGGCCTTATTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSISAVG*IGPYCF Trigger: AAAGCAATAAGGCCCGATTCATCCCACAGCACTGAT...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCCCGAAGGTTCATGCATaGTGCATTGTCACACAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: SITHKRHTSTVLHICFLPPKVHA*CIVTQY Trigger: GTACTGTGTGACAATGCATCATGCATGAACCTTCGG...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTGAAATTTTACAGCAGTaGCTCTTGCTGTCTCTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFEILQQ*LLLSLS Trigger: GCTTAGAGACAGCAAGAGGCACTGCTGTAAAATTTC...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAATGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKWTRIS*LRTLVA Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| 3UTR-3UTR GCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGKLTSV*GHNPLV Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAGCTCCTTTTCTACTATaGTTGGGATTCCAATCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTAPFLL*LGFQSF Trigger: GAAAGATTGGAATCCCAAGCATAGTAGAAAAGGAGC...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAATGGTCAGGTCATCATTaGGTGAAGAGTTCAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKWSGHH*VKSSEV Trigger: GACCTCTGAACTCTTCACCCAATGATGACCTGACCA...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATGGTCAGGTCATCATTaGGTGAAGAGTTCAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKWSGHH*VKSSEV Trigger: GACCTCTGAACTCTTCACCCAATGATGACCTGACCA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGAATAACATATTACCATTaGAGCTTTTGTGCAGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRITYYH*SFCAAE Trigger: TTCTGCTGCACAAAAGCTCCAATGGTAATATGTTAT...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTGATATGTCCATAAAATaGGTTATCATTCCCACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LASISPGDSKLQVMLSSSDMSIK*VIIPTV Trigger: TACAGTGGGAATGATAACCCATTTTATGGACATATC...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACTGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNWTRIS*LRTLVA Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAACTGACCGAAGGTTCATaGATGATGCATTGTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: LLQLQNCLTFKRETGEEKLTEGS*MMHCHT Trigger: TGTGTGACAATGCATCATGCATGAACCTTCGGTCAG...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAACTGACCGAAGGTTCATaGATGATGCATTGTCACACA | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKLTEGS*MMHCHT Trigger: TGTGTGACAATGCATCATGCATGAACCTTCGGTCAG...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAAAGCATGGTAATGTTTTaGATGCTCAGATCAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKSMVMF*MLRSAG Trigger: CCCAGCTGATCTGAGCATCCAAAACATTACCATGCT...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAAGAAAATGGTTCCAAGTaGGACAGAATAATGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKENGSK*DRIMER Trigger: CCTCTCCATTATTCTGTCTCACTTGGAACCATTTTC...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAACAGACAAGGTACTGTTaGTCTGACACAAAAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKQTRYC*SDTKMD Trigger: GTCCATTTTTGTGTCAGATCAACAGTACCTTGTCTG...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAATATCATTGTTTTACTaGTTAGGTGGCAAAGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTISLFY*LGGKAR Trigger: TCTTGCTTTGCCACCTAAGCAGTAAAACAATGATAT...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTGCTTTGCACACGGACTaGTTCAACTACAAAACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASITHKRHTSTVLHICFLALHTD*FNYKTV Trigger: AACAGTTTTGTAGTTGAAGCAGTCCGTGTGCAAAGC...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTGTGTTGCAAACTTTTTaGACACCCAGCACATTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLVLQTF*TPSTLL Trigger: AAGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACAC...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGTTATCTTCACAGTCCTaGCTGTTGATTTTAGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGLSSQS*LLILGM Trigger: CATACCTAAAATCAACAGTCAGGACTGTGAAGATAA...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATCACCTCAAGTGTTCTaGGTGTCGCATATTTATTCA | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKSPQVF*VSHIYS Trigger: TGAATAAATATGCGACACTCAGAACACTTGAGGTGA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: SQLVFKFQTNCEITMEVGKLTSV*GHNPLV Trigger: TACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTT...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACTATATGTCCTCGGGCTaGTTCCTTGCATCAAATGAA | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNYMSSG*FLASNE Trigger: TTCATTTGATGCAAGGAAGCAGCCCGAGGACATATA...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACTGTCTGGTAAAACAGTaGGGTTGCACAGAAACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNCLVKQ*GCTETV Trigger: AACTGTTTCTGTGCAACCCCACTGTTTTACCAGACA...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTATATTAAGTGGAGGATaGGGGAGGGAACCTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLILSGG*GREPLK Trigger: TTTTAAAGGTTCCCTCCCCCATCCTCCACTTAATAT...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGTTTTTCCATCAGGTCTaGTGTTGCAAACTTTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGFFHQV*CCKLFG Trigger: TCCAAAAAGTTTGCAACACCAGACCTGATGGAAAAA...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACCAGATGAGCCATGCATaGAATGTGTTGTCATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNQMSHA*NVLSFS Trigger: GGAAAATGACAACACATTCCATGCATGGCTCATCTG...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTTTATCTTCACAGTCCTaGCTGTTGATTTTAGGTATG | + |
|
Preference number: 2 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLLSSQS*LLILGM Trigger: CATACCTAAAATCAACAGTCAGGACTGTGAAGATAA...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACAAAATTAATATTAAGTaGAGGATGGGGGAGGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNKINIK*RMGEGT Trigger: GGTTCCCTCCCCCATCCTCCACTTAATATTAATTTT...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTGCTGACACTGCATTTTaGACACAAACAGAACTAATC | + |
|
Preference number: 2 (lower is better) Translates to: SQLVFKFQTNCEITMEVGADTAF*TQTELI Trigger: GATTAGTTCTGTTTGTGTTCAAAATGCAGTGTCAGC...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACGTTTCAAACCAATTGTaGAATAACTATGGAAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNVSNQL*NNYGSG Trigger: CCCACTTCCATAGTTATTTCACAATTGGTTTGAAAC...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCTCTTTGTCTTTTGTTTaGTTAGATGGTAAGACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SITHKRHTSTVLHICFLPSLSFV*LDGKTN Trigger: GTTCGTCTTACCATCTAACCAAACAAAAGACAAAGA...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATCTTTGTCTTTTGTTTaGTTAGATGGTAAGACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: MKRISPSSKQLEDKGTSKSLSFV*LDGKTN Trigger: GTTCGTCTTACCATCTAACCAAACAAAAGACAAAGA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACGTAGTAGTATTGTTATaGATATGCCACCAGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: NEKMLSARLESMPLHKSNVVVLL*ICHQIL Trigger: CAAAATCTGGTGGCATATGCATAACAATACTACTAC...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CCA 72 bp | AACAAGAGCTTCTGTGAGTGCGGCAGAGAGGAGTTCTaGGGAAGGAGCATGCACGGGGGCCACAGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: NKSFCECGREEF*GRSMHGGHRTE Trigger: CTCTGTCCTGTGGCCCCCGTGCATGCTCCTTCCCCAGAACTCCTCTCTGCCGCACTCACAGAAGCTCTTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR GCA 72 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTaGCTACCATGGATTAGTTGCTGCTCCTCCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AHSLHTAPPAHI*LPWISCCSSSP Trigger: GGGAGAGGAGGAGCAGCAACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | CTGAGAGCCCTAACTCCTCAGGAACAAGAGCTTCTGTaGGTGCGGCAGAGAGGAGTTCTGGGGAAGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRALTPQEQELL*VRQRGVLGKEH Trigger: ATGCTCCTTCCCCAGAACTCCTCTCTGCCGCACTCACAGAAGCTCTTGTTCCTGAGGAGTTAGGGCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR CCA 72 bp | CTCCCCTTCTTAAGAGAGGCCTTCTTACCGTTCGCTTaGGGTGGGGCATTGAGAGATGATCAGTGCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPFLREAFLPFA*GGALRDDQCCG Trigger: CCCACAGCACTGATCATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAGGCCTCTCTTAAGAAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTGCTTGGGGTGGGGCATaGAGAGATGATCAGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AHSLHTAPPAHICLPWISAWGGA*RDDQCC Trigger: ACAGCACTGATCATCTCTCAATGCCCCACCCCAAGC...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | GTAAGACGAACGGACAAGTGCCTCAGCTCGCTGCACTaGCGACAGGCAAGCAAAGGCGATTACCAGTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: VRRTDKCLSSLH*RQASKGDYQLT Trigger: AGTTAACTGGTAATCGCCTTTGCTTGCCTGTCGTCAGTGCAGCGAGCTGAGGCACTTGTCCGTTCGTCTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | CTTGACTGTGAAGCCATGAGGGTATGGAAGAGGGCATaGGTTGATGAGCCAGGAGTCCACAATCACTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LDCEAMRVWKRA*VDEPGVHNHLR Trigger: TCTCAAGTGATTGTGGACTCCTGGCTCATCAACTCATGCCCTCTTCCATACCCTCATGGCTTCACAGTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACACTTCGGTCCTCTCCCTaGGACCCAGTGAGTACATGT | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTLRSSP*DPVSTC Trigger: ACATGTACTCACTGGGTCCAAGGGAGAGGACCGAAG...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTTCTGCACCAGCACCCTaGTATAGTAAAAGTATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: AHSLHTAPPAHICLPWISSAPAP*YSKSIY Trigger: GTAGATACTTTTACTATACAAGGGTGCTGGTGCAGA...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGATTGTGCAGCAGAAGCTaGACAGTGTCTGAAACGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRLCSRS*TVSETL Trigger: GAGCGTTTCAGACACTGTCAAGCTTCTGCTGCACAA...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | GGTATGTATGAGCTTCACATGCCATGGCTCACATGCTaGACACAGCTCTGGTTCTTTCCTCCTTCTATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GMYELHMPWLTC*TQLWFFPPSMG Trigger: ACCCATAGAAGGAGGAAAGAACCAGAGCTGTGTTCAGCATGTGAGCCATGGCATGTGAAGCTCATACATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | CACACACACGTCAGATTACAGTGTTTGTCTCTGCCGTaGTTCCTGTGTAGTTGTCTAGGCTGTTCTGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: HTHVRLQCLSLP*FLCSCLGCSGT Trigger: AGTTCCAGAACAGCCTAGACAACTACACAGGAAGCACGGCAGAGACAAACACTGTAATCTGACGTGTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACATGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTCGHNP*VRMDTH Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTCATTCAGAGAGAGCTTaGACTTCGCTAGGAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LASISPGDSKLQVMLSSSHSERA*TSLGEE Trigger: TTCTTCTCCTAGCGAAGTCAAAGCTCTCTCTGAATG...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | TTCCTACAAGTCTCTCACAGTAACTGCCTCTGTCACTaGGTAGTTAGGGCCATCTGTCTCCCCTTCTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLQVSHSNCLCH*VVRAICLPFLR Trigger: TCTTAAGAAGGGGAGACAGATGGCCCTAACTACTCAGTGACAGAGGCAGTTACTGTGAGAGACTTGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAGGTGTTGCAAACTTTTaGGACACCCAGCACATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTGVANF*DTQHIA Trigger: AGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACACC...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCGCTTGGGGTGGGGCATaGAGAGATGATCAGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SITHKRHTSTVLHICFLPAWGGA*RDDQCC Trigger: ACAGCACTGATCATCTCTCAATGCCCCACCCCAAGC...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCCTTCTTACCGTTCGCTaGGGGTGGGGCATTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SITHKRHTSTVLHICFLPLLTVR*GWGIER Trigger: TCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAG...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGAGCACCATGTGAGTCTTaGAGCAACATTTTCAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRAPCES*SNIFNR Trigger: CCTATTGAAAATGTTGCTCAAAGACTCACATGGTGC...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | TTAGTATTCATTTCTCTGTGCCTGGGGCAGCTACACTaGCATCTTATTGTTGGCTTGAGAAGATGCAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LVFISLCLGQLH*HLIVGLRRCST Trigger: TGTGCTGCATCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAATGAATACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | TTAACTCCGCTCTGTACTTTAGTATTCATTTCTCTGTaGCTGGGGCAGCTACACTGCCATCTTATTGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LTPLCTLVFISL*LGQLHCHLIVG Trigger: GCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAATGAATACTAAAGTACAGAGCGGAGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGATTCATGCATGATGCATaGTCACACAGTACATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRFMHDA*SHSTFR Trigger: TCTGAATGTACTGTGTGACAATGCATCATGCATGAA...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | CCCATCATCAGGCTGTGTGATACTACTGCACTTACATaGAAATGTGGCATACCACACTATTTGCACCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: PIIRLCDTTALT*KCGIPHYLHHV Trigger: CACATGGTGCAAATAGTGTGGTATGCCACATTTTCATGTAAGTGCAGTAGTATCACACAGCCTGATGATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | GTATTGTGCTTCAGTTTGACCAGTTTGATTCAGCATTaGGCACCAGCTATACACACACTTTTGTCAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VLCFSLTSLIQH*APAIHTLLSGL Trigger: GAGGCCTGACAAAAGTGTGTGTATAGCTGGTGCTCAATGCTGAATCAAACTGGTCAAACTGAAGCACAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTaGGGTCACAATCCTTTGGTAAGGATGGACACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: INKNCRTKLTSV*GHNPLVRMDTH Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAATTCTTAGCCTTTCGTaGGGAAAGCCATACCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTILSLS*GKPYLK Trigger: CTTTAGGTATGGCTTTCCCAACGAAAGGCTAAGAAT...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASITHKRHTSTVLHICFLCGHNP*VRMDTH Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGAGACAAAAAGGCTCTTTaGGTCTTTTGTTTCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRDKKAL*VFCFLT Trigger: TGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTC...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | CAGTATCTCACGAGCTCTATTAGAACCAGACGTGTCTaGGCTTTACTAGTCACATATTCACTGAAGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QYLTSSIRTRRV*ALLVTYSLKCL Trigger: AAGGCACTTCAGTGAATATGTGACTAGTAAAGCTCAGACACGTCTGGTTCTAATAGAGCTCGTGAGATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| 3UTR TCA 72 bp | GACACTAGAACATTCCTATCCCATCATCAGGCTGTGTaGTACTACTGCACTTACATGAAAATGTGGCATACC | + |
|
Preference number: 3 (lower is better) Translates to: DTRTFLSHHQAV*YYCTYMKMWHT Trigger: GGTATGCCACATTTTCATGTAAGTGCAGTAGTATCACACAGCCTGATGATGGGATAGGAATGTTCTAGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | AGTCTTTTATTGTTTGTGGTATGTATGAGCTTCACATaGCATGGCTCACATGCTGAACACAGCTCTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLLFVVCMSFT*HGSHAEHSSGS Trigger: AGAACCAGAGCTGTGTTCAGCATGTGAGCCATGGCATGTGAAGCTCATACATACCACAAACAATAAAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGGTCATCAATGAAGATTaGATGCTAATACCAATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRVINED*MLIPIS Trigger: GGAGATTGGTATTAGCATCAAATCTTCATTGATGAC...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACACCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTPHLVK*QLPRQS Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCCCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PSTLLINKNCRTKLTSVCPHLVK*QLPRQS Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTGGAGTCCACAATCACTaGAGATTTGCCACATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSGVHNH*RFATSG Trigger: ACCAGATGTGGCAAATCTCAAGTGATTGTGGACTCC...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | ATGCAGCTTCAAAGTATCTATGAGACTGCCCACATCTaGAGTAACCTTTCCCATCTAACTTCCTCATCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: MQLQSIYETAHI*SNLSHLTSSSL Trigger: TAGAGATGAGGAAGTTAGATGGGAAAGGTTACTTCAGATGTGGGCAGTCTCATAGATACTTTGAAGCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR TCA 72 bp | TGTGGCATACCACACTATTTGCACCATGTGAGTCTTTaGGCAACATTTTCAATAGGAATGGTGGTGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGIPHYLHHVSL*ATFSIGMVVMR Trigger: TCTCATCACCACCATTCCTATTGAAAATGTTGCTCAAAGACTCACATGGTGCAAATAGTGTGGTATGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACTTACAGCAGTGCCTCTaGCTGTCTCTAAGCAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NEKMLSARLESMPLHKSNLQQCL*LSLSSK Trigger: TTTACTGCTTAGAGACAGCAAGAGGCACTGCTGTAA...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTCCTCGGGCTGCTTCCTaGCATCAAATGAATGCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SQLVFKFQTNCEITMEVGPRAAS*HQMNAN Trigger: ATTAGCATTCATTTGATGCAAGGAAGCAGCCCGAGG...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: NEKMLSARLESMPLHKSNTEVPF*QQDYLN Trigger: ATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGT...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAACCGCACCTAGTTAAATaGCAATTACCAAGACAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLQLQNCLTFKRETGEEKPHLVK*QLPRQS Trigger: ACTTTGTCTTGGTAATTGCAATTTAACTAGGTGCGG...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTTCATGCATGATGCATaGTCACACAGTACATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASITHKRHTSTVLHICFLFMHDA*SHSTFR Trigger: TCTGAATGTACTGTGTGACAATGCATCATGCATGAA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | AGTTCTCAAGTGGAAAAGTTATCACTCCAAAGTCCTTaGGTAGCTCCTTCTTTAATCAACCTCTCACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSQVEKLSLQSP*VAPSLINLSHS Trigger: AGAATGTGAGAGGTTGATTAAAGAAGGAGCTACTCAAGGACTTTGGAGTGATAACTTTTCCACTTGAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLAETKH*LNSDLM Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SITHKRHTSTVLHICFLPAETKH*LNSDLM Trigger: CATCAGATCTGAATTTAACAAATGCTTAGTCTCAGC...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAGACAAAAAGGCTCTTTaGGTCTTTTGTTTCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LLQLQNCLTFKRETGEEKDKKAL*VFCFLT Trigger: TGTCAAGAAACAAAAGACCAAAAGAGCCTTTTTGTC...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | AAACAACATAGAAAACAAGTCACACTATGTTATCTCTaGTCACGTTCTTCAGTGTTAGTCCAGGAACTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KQHRKQVTLCYL*SRSSVLVQELK Trigger: CTTGAGTTCCTGGACTAACACTGAAGAACGTGATCAGAGATAACATAGTGTGACTTGTTTTCTATGTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | AAGGTGCATCATTACAGTAAATTTCTTGACTCTTTATaGTGTGAGCAGAGAGTGATTATTTTGGAGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVHHYSKFLDSL*CEQRVIILEQE Trigger: TTCCTGCTCCAAAATAATCACTCTCTGCTCACAGCATAAAGAGTCAAGAAATTTACTGTAATGATGCACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR TCA 72 bp | AACCAGGTACTACATGTACCATGGATATGTCTAAATTaGTATGTCCATAAAATGGGTTATCATTCCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: NQVLHVPWICLN*YVHKMGYHSHC Trigger: ACAGTGGGAATGATAACCCATTTTATGGACATATCAATTTAGACATATCCATGGTACATGTAGTACCTGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR GCA 72 bp | TTGGCACAACTGCATGTAGTAGTATTGTTATGCATATaGCACCAGATTTTGTTCAATGAAAAACCACTACAA | + |
|
Preference number: 3 (lower is better) Translates to: LAQLHVVVLLCI*HQILFNEKPLQ Trigger: TTGTAGTGGTTTTTCATTGAACAAAATCTGGTGGCATATGCATAACAATACTACTACATGCAGTTGTGCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR GCA 72 bp | AAAGACTCAACAAAGAATCAAACTGGTCTCTCAAGGTaGATCATTACAGTAAATTTCTTGACTCTTTATGCT | + |
|
Preference number: 3 (lower is better) Translates to: KDSTKNQTGLSR*IITVNFLTLYA Trigger: AGCATAAAGAGTCAAGAAATTTACTGTAATGATGCACCTTGAGAGACCAGTTTGATTCTTTGTTGAGTCTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR CAA 72 bp | GTTGCCGGTGGCGGCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAGGGSVCGHNP*VRMDTHIVPSN Trigger: GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGCCGCCACCGGCAAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097414.11 |
||
| CDS-3UTR CCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTATGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLCTQSS*WEDRRR Trigger: CCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACA...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR CAA 72 bp | AGAGAGGCCTTCTTACCGTTCGCTTGGGGTGGGGCATaGAGAGATGATCAGTGCTGTGGGATGAATCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: REAFLPFAWGGA*RDDQCCGMNRA Trigger: GGCCCGATTCATCCCACAGCACTGATCATCTCTCAATGCCCCACCCCAAGCGAACGGTAAGAAGGCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSLHTAPPAHICLPWISWAGCS*ASCRSS Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTCTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSLHTAPPAHICLPWISLVTEQ*VPPRQA Trigger: TGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAG...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCCCCTGGAGGGACTATTaGAGCAGTTGGGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLASISPGDSKLQVMLSSPWRDY*SSWVRS Trigger: ACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGG...GGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGAAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRSSRSR*LKIPQK Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTACTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLLVTEQ*VPPRQA Trigger: TGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAG...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGATGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRCTQSS*WEDRRR Trigger: CCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACA...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACATGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTCTQSS*WEDRRR Trigger: CCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACA...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCAGCAGCCTGGGCAGTTaGTGCAAGAGAAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLASISPGDSKLQVMLSSSSLGS*CKRKGK Trigger: CTTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCT...GGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTAAGGGTACTCAAGGATTaGTGTAGCTGGTGCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLRVLKD*CSWCQC Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTACCCT...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGAAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRSSRSR*LKIPQK Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGACCCAGTGATGATCCTTaGAGCAGCCTGGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRPSDDP*SSLGSC Trigger: GCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGG...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACATATGGTAGGGCCAGCTaGCGTAGGTGTACGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTYGRAS*RRCTQS Trigger: GCTCTGCGTACACCTACGCCAGCTGGCCCTACCATA...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | GGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTTaGCCCACTCACTACATACAGCACCTCCTGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GDSKLQVMLSSS*PTHYIQHLLPT Trigger: TGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGCAAAGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGGCCGCTCGAGGTGGTTaGAGATCCCGCAGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGAARGG*RSRRSW Trigger: CCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGC...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTAGTTTCTCTTGTAACTaGACAATGGGTCCCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LASISPGDSKLQVMLSSSSFSCN*TMGPTA Trigger: CGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACT...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LASISPGDSKLQVMLSSSEFRLA*QRSVFV Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTACCCTCATTGAGCCTTTaGCTCGGACCATTATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLPSLSL*LGPLFY Trigger: GTAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGG...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGACCCTGGAGGGACTATTaGAGCAGTTGGGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRPWRDY*SSWVRS Trigger: ACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGG...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | ATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACAGGGGGTGGCGGCTCGGTCTaGGGTCACAATCCTTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IALLLFSAGSRTTFTQTGGGGSV*GHNPLV Trigger: TACCAAAGGATTGTGACCGCAGACCGAGCCGCCACC...CCCTGTTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGCCCAGTGATGATCCTTaGAGCAGCCTGGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: INKNCRTKLTSVCGHNPLPSDDP*SSLGSC Trigger: GCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGG...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTTGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSCTQSS*WEDRRR Trigger: CCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACA...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR CAA 72 bp | CAAACAGGTTGGCCTTCTACCTACTTCACCTCTTCATaGACAGTCCCCAAGTCACAGTATCTCACGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGWPSTYFTSS*TVPKSQYLTSS Trigger: AGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAAGTAGGTAGAAGGCCAACCTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | AGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTaGGTAAGGATGGACACGCATATCGTGCCTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTKLTSVCGHNP*VRMDTHIVPSN Trigger: GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRAPNWA*LYFAPP Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRASSIS*IFFRLS Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGAAGCAGCCTGGGCAGTTaGTGCAAGAGAAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRSSLGS*CKRKGK Trigger: CTTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCT...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTCCCTGGAGGGACTATTaGAGCAGTTGGGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFPWRDY*SSWVRS Trigger: ACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGG...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGCTGCATCAAATAATCTaGGGTGGGCTTCGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRLHQII*GGLRLL Trigger: GAGAAGCCGAAGCCCACCCCAGATTATTTGATGCAG...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGSSRSR*LKIPQK Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTATTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLLDAPN*ACLYFA Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGAAGTTTCTCTTGTAACTaGACAATGGGTCCCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRSFSCN*TMGPTA Trigger: CGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACT...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGCTTTTTATCCCTCATTaGGCCTTTGCCTCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRLFIPH*AFASDH Trigger: ATGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAG...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACATCAAATAATCTGGGGTaGGCTTCGGCTTCTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTSNNLG*ASASPS Trigger: CGAAGGAGAAGCCGAAGCCCACCCCAGATTATTTGA...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGACTGCATCAAATAATCTaGGGTGGGCTTCGGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRLHQII*GGLRLL Trigger: GAGAAGCCGAAGCCCACCCCAGATTATTTGATGCAG...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCAGTGATGATCCTTaGAGCAGCCTGGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLPSDDP*SSLGSC Trigger: GCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGG...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTCCCAGTGATGATCCTTaGAGCAGCCTGGGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLPSDDP*SSLGSC Trigger: GCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGG...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGTATGGTAGGGCCAGCTaGCGTAGGTGTACGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLYGRAS*RRCTQS Trigger: GCTCTGCGTACACCTACGCCAGCTGGCCCTACCATA...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAATATGGTAGGGCCAGCTaGCGTAGGTGTACGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLQNCLTFKRETGEEKYGRAS*RRCTQS Trigger: GCTCTGCGTACACCTACGCCAGCTGGCCCTACCATA...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACAGACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTDYCSS*VRSSVW Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTC...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGCCCAGCTTCAGGCCCTaGAGGGACTATTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLPSFRP*RDYCSS Trigger: ACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGG...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAACCCAGCTTCAGGCCCTaGAGGGACTATTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MKRISPSSKQLEDKGTSKPSFRP*RDYCSS Trigger: ACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGG...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFAPNWA*LYFAPP Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFASSIS*IFFRLS Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTCCCTGGAGGGACTATTaGAGCAGTTGGGTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLPWRDY*SSWVRS Trigger: ACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGG...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEKMLSARLESMPLHKSNSSRSR*LKIPQK Trigger: CTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: INKNCRTKLTSVCGHNPLVRSSV*HDSGLY Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACCCCAGCTTCAGGCCCTaGAGGGACTATTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NEKMLSARLESMPLHKSNPSFRP*RDYCSS Trigger: ACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGG...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | AACGACATCCCTGACCGAAGGTTCATGCATGATGCATaGTCACACAGTACATTCAGAGAGAGCTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDIPDRRFMHDA*SHSTFRESFDF Trigger: GAAGTCAAAGCTCTCTCTGAATGTACTGTGTGACAATGCATCATGCATGAACCTTCGGTCAGGGATGTCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| 3UTR CAA 72 bp | AGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTaGAGCTCCTCTTTGCCCACTCACTACATACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SISPGDSKLQVM*SSSLPTHYIQH Trigger: GTGCTGTATGTAGTGAGTGGGCAAAGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLWAGCS*ASCRSS Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGAGTTTCTCTTGTAACTaGACAATGGGTCCCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGSFSCN*TMGPTA Trigger: CGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACT...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACAGGGCTTTTTATCCCTCATTaGGCCTTTGCCTCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: IALLLFSAGSRTTFTQTGLFIPH*AFASDH Trigger: ATGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAG...CCCTGTTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTGAGCATCTTCCACAGTaGTTAGTACATGTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LASISPGDSKLQVMLSSSEHLPQ*LVHVSL Trigger: AAGACTTACATGTACTAATCACTGTGGAAGATGCTC...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRISALF*ASSTVI Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACAGGGAGGGTACTCAAGGATTaGTGTAGCTGGTGCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: IALLLFSAGSRTTFTQTGRVLKD*CSWCQC Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTACCCT...CCCTGTTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGACCCTCATTGAGCCTTTaGCTCGGACCATTATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRPSLSL*LGPLFY Trigger: GTAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGG...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAAGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKASSIS*IFFRLS Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCAGCAGCCTGGGCAGTTaGTGCAAGAGAAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SITHKRHTSTVLHICFLPSSLGS*CKRKGK Trigger: CTTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCT...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGAGCAGCCTGGGCAGTTaGTGCAAGAGAAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLSSLGS*CKRKGK Trigger: CTTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCT...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGCTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLLVTEQ*VPPRQA Trigger: TGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAG...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGGACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGDYCSS*VRSSVW Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTC...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAAGACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKDYCSS*VRSSVW Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTC...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTCCCAGCTTCAGGCCCTaGAGGGACTATTGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGPSFRP*RDYCSS Trigger: ACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGG...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | AGAGATGATCAGTGCTGTGGGATGAATCGGGCCTTATaGCTTTACTACTATTCAGTGCAGGTTCTAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: RDDQCCGMNRAL*LYYYSVQVLEP Trigger: TGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGCCCGATTCATCCCACAGCACTGATCATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGAGTTTCTCTTGTAACTaGACAATGGGTCCCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLSFSCN*TMGPTA Trigger: CGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACT...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLEFRLA*QRSVFV Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGCGCGTCAGGCAATTCTaGACTTCTTTTCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: INKNCRTKLTSVCGHNPLRVRQF*TSFLCT Trigger: AGTACAGAGAAAAGAAGTGCAGAATTGCCTGACGCG...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTCGCGTCAGGCAATTCTaGACTTCTTTTCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFRVRQF*TSFLCT Trigger: AGTACAGAGAAAAGAAGTGCAGAATTGCCTGACGCG...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTCCCTCATTGAGCCTTTaGCTCGGACCATTATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFPSLSL*LGPLFY Trigger: GTAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGG...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLQNCLTFKRETGEEKAPNWA*LYFAPP Trigger: AGGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGC...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTGCAAGCTCCATCAGCTaGATCTTCTTCAGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSASSIS*IFFRLS Trigger: AGACAGCCTGAAGAAGATGCAGCTGATGGAGCTTGC...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGTGGCGTCTCTGTAGGTaGCATTCAGAATTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGWRLCR*HSELQA Trigger: AGCTTGCAATTCTGAATGGCACCTACAGAGACGCCA...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAATGGACACGCATATCGTaGCTTCGAACTTTAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKWTRIS*LRTLVA Trigger: GGCTACTAAAGTTCGAAGGCACGATATGCGTGTCCA...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGTCAAATAATCTGGGGTaGGCTTCGGCTTCTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLSNNLG*ASASPS Trigger: CGAAGGAGAAGCCGAAGCCCACCCCAGATTATTTGA...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTCAAATAATCTGGGGTaGGCTTCGGCTTCTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLSNNLG*ASASPS Trigger: CGAAGGAGAAGCCGAAGCCCACCCCAGATTATTTGA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLVRSSV*HDSGLY Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAAGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MKRISPSSKQLEDKGTSKVRSSV*HDSGLY Trigger: ATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTGACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSDYCSS*VRSSVW Trigger: CCAAACGGAACTCCTCACCCAACTGCTGCAATAGTC...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| 3UTR CAA 72 bp | CTAAGGTTTTTCCCGGAGGCTGCTGAGACTAAGCATTaGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRFFPEAAETKH*LNSDLMRVRLR Trigger: TCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGTCTCAGCAGCCTCCGGGAAAAACCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | TGTATTGTGCTTCAGTTTGACCAGTTTGATTCAGCATaGAGCACCAGCTATACACACACTTTTGTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CIVLQFDQFDSA*STSYTHTFVRP Trigger: AGGCCTGACAAAAGTGTGTGTATAGCTGGTGCTCAATGCTGAATCAAACTGGTCAAACTGAAGCACAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAAAGGACTAATATCATTGTTTTACTGCTTAGGTGGCAAAGCAAGAAATTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSKGLISLFYCLGGKARNWAGCS*ASCRSS Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...ATTTCTTGCTTTGCCACCTAAGCAGTAAAACAATGATATTAGTCCTTTGGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTTGGGCAGGCTGCTCATaGGCTTCTTGTCGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGWAGCS*ASCRSS Trigger: TGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCA...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCCTTTTTATCCCTCATTaGGCCTTTGCCTCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SITHKRHTSTVLHICFLPLFIPH*AFASDH Trigger: ATGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAG...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGAGCATCTTCCACAGTaGTTAGTACATGTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTLLINKNCRTKLTSVCEHLPQ*LVHVSL Trigger: AAGACTTACATGTACTAATCACTGTGGAAGATGCTC...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: INKNCRTKLTSVCGHNPLISALF*ASSTVI Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACGAGTTCCGTTTGGCATaGCAGCGGTCTGTATTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NEKMLSARLESMPLHKSNEFRLA*QRSVFV Trigger: GACAAATACAGACCGCTGTCATGCCAAACGGAACTC...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACGCGTCAGGCAATTCTaGACTTCTTTTCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKRVRQF*TSFLCT Trigger: AGTACAGAGAAAAGAAGTGCAGAATTGCCTGACGCG...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTGGCGTCTCTGTAGGTaGCATTCAGAATTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLWRLCR*HSELQA Trigger: AGCTTGCAATTCTGAATGGCACCTACAGAGACGCCA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATGGCGTCTCTGTAGGTaGCATTCAGAATTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKRISPSSKQLEDKGTSKWRLCR*HSELQA Trigger: AGCTTGCAATTCTGAATGGCACCTACAGAGACGCCA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTTGGCGTCTCTGTAGGTaGCATTCAGAATTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLWRLCR*HSELQA Trigger: AGCTTGCAATTCTGAATGGCACCTACAGAGACGCCA...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTCTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGLVTEQ*VPPRQA Trigger: TGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAG...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | GGTCTGGTGTTGCAAACTTTTTGGACACCCAGCACATaGCTTATAAACAAGAACTGCAGAACTAAACTAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLVLQTFWTPST*LINKNCRTKLT Trigger: GGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACACCAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | CAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTaGCAAACTTTTTGGACACCCAGCACATTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: QVDSYIFPSGLV*QTFWTPSTLLI Trigger: TATAAGCAATGTGCTGGGTGTCCAAAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | ATGTGGCATACCACACTATTTGCACCATGTGAGTCTTaGAGCAACATTTTCAATAGGAATGGTGGTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: MWHTTLFAPCES*SNIFNRNGGDE Trigger: CTCATCACCACCATTCCTATTGAAAATGTTGCTCAAAGACTCACATGGTGCAAATAGTGTGGTATGCCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCGCGTCAGGCAATTCTaGACTTCTTTTCTCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLRVRQF*TSFLCT Trigger: AGTACAGAGAAAAGAAGTGCAGAATTGCCTGACGCG...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCCCCTCATTGAGCCTTTaGCTCGGACCATTATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SITHKRHTSTVLHICFLPPSLSL*LGPLFY Trigger: GTAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGG...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTCTTTTTATCCCTCATTaGGCCTTTGCCTCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGLFIPH*AFASDH Trigger: ATGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAG...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLISALF*ASSTVI Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| CDS-3UTR TCA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAAATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: MKRISPSSKQLEDKGTSKISALF*ASSTVI Trigger: AATCACTGTGGAAGATGCTCAGAACAGAGCAGAAAT...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAAAGGACTAATATCATTGTTTTACTGCTTAGGTGGCAAAGCAAGAAATAGGGTACTCAAGGATTaGTGTAGCTGGTGCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FSKGLISLFYCLGGKARNRVLKD*CSWCQC Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTACCCT...ATTTCTTGCTTTGCCACCTAAGCAGTAAAACAATGATATTAGTCCTTTGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTAGGGTACTCAAGGATTaGTGTAGCTGGTGCCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGRVLKD*CSWCQC Trigger: ACATTGGCACCAGCTACATCAATCCTTGAGTACCCT...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGTTTACATCCCGTTTCTaGTTCAAGTTGTTTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: INKNCRTKLTSVCGHNPLFTSRF*FKLFSC Trigger: ACAGCTAAACAACTTGAAGCAGAAACGGGATGTAAA...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAAAGTCTTCATTTAGATaGTCCCAATTGGGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLQNCLTFKRETGEEKKSSFR*SQLGLP Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTT...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTAAGTCTTCATTTAGATaGTCCCAATTGGGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASITHKRHTSTVLHICFLKSSFR*SQLGLP Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTT...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAATTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLQNCLTFKRETGEEKLDAPN*ACLYFA Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGGAGCATCTTCCACAGTaGTTAGTACATGTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLEHLPQ*LVHVSL Trigger: AAGACTTACATGTACTAATCACTGTGGAAGATGCTC...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEKMLSARLESMPLHKSNLDAPN*ACLYFA Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | TATGCGACTCTGATACAATGGTTGATATGCTCACACTaGGCACAACTGCATGTAGTAGTATTGTTATGCATA | + |
|
Preference number: 4 (lower is better) Translates to: YATLIQWLICSH*AQLHVVVLLCI Trigger: TATGCATAACAATACTACTACATGCAGTTGTGCCAAGTGTGAGCATATCAACCATTGTATCAGAGTCGCATA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCCAAAGGACTAATATCATTGTTTTACTGCTTAGGTGGCAAAGCAAGAAATAAGTCTTCATTTAGATaGTCCCAATTGGGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKGLISLFYCLGGKARNKSSFR*SQLGLP Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTT...ATTTCTTGCTTTGCCACCTAAGCAGTAAAACAATGATATTAGTCCTTTGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTAAGTCTTCATTTAGATaGTCCCAATTGGGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGKSSFR*SQLGLP Trigger: AGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTT...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGLDAPN*ACLYFA Trigger: AGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAA...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | ATATGCTCACACTTGGCACAACTGCATGTAGTAGTATaGTTATGCATATGCCACCAGATTTTGTTCAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ICSHLAQLHVVV*LCICHQILFNE Trigger: TTCATTGAACAAAATCTGGTGGCATATGCATAACAATACTACTACATGCAGTTGTGCCAAGTGTGAGCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | GACAGTTACATGGTTATATGTCCTCGGGCTGCTTCCTaGCATCAAATGAATGCTAATAATAATCTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DSYMVICPRAAS*HQMNANNNLLK Trigger: TTTGAGAAGATTATTATTAGCATTCATTTGATGCAAGGAAGCAGCCCGAGGACATATAACCATGTAACTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTGAGCATCTTCCACAGTaGTTAGTACATGTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLVFKFQTNCEITMEVGEHLPQ*LVHVSL Trigger: AAGACTTACATGTACTAATCACTGTGGAAGATGCTC...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | TTACTTTATAATGGAGAAATTTTACAGCAGTGCCTCTaGCTGTCTCTAAGCAGTAAACTGGTTGAAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLYNGEILQQCL*LSLSSKLVENL Trigger: TAGGTTTTCAACCAGTTTACTGCTTAGAGACAGCAAGAGGCACTGCTGTAAAATTTCTCCATTATAAAGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
||
| 3UTR CAA 72 bp | AGCTTTACTAGTCACATATTCACTGAAGTGCCTTTCTaGCAGCAGGACTACTTAAATAATGCCACATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFTSHIFTEVPF*QQDYLNNATFN Trigger: ATTAAATGTGGCATTATTTAAGTAGTCCTGCTGCAAGAAAGGCACTTCAGTGAATATGTGACTAGTAAAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
||
| 3UTR CAA 72 bp | AGATACTTCACTAAGTACATCAATATCACCAGCCTTTaGAATAAAACACAGATAACCATTTCACCAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYFTKYINITSL*NKTQITISPNS Trigger: GCTGTTTGGTGAAATGGTTATCTGTGTTTTATTCAAAAGGCTGGTGATATTGATGTACTTAGTGAAGTATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS CCA 90 bp | AGGCATTATGGTAGGGCCAGCTGGCGTAGGTGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGGCCCAGTGATGATCCTTGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHYGRASWRRCTQSS*WEDRRRPSDDPWSS Trigger: GCTGCTCCAAGGATCATCACTGGGCCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACACCTACGCCAGCTGGCCCTACCATAATGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
||
| CDS CCA 90 bp | GGTGGGAGGACAGGCGCAGGCCCAGTGATGATCCTTGGAGCAGCCTaGGCAGTTGCTGCAAGAGAAAAGGCAAGGGCTGGTGATTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: GGRTGAGPVMILGAA*AVAAREKARAGDLM Trigger: CATTAAATCACCAGCCCTTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGGCCTGCGCCTGTCCTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
||
| CDS CCA 90 bp | AGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGTAGGGCCAGCTaGCGTAGGTGTACGCAGAGCAGCTGGTGGGAGGACAGGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGLYLSDQRHYGRAS*RRCTQSSWWEDRRR Trigger: CCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACACCTACGCCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CCA 90 bp | TCTTTCCGTACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFRTLLISSSSSRSR*LKIPQKLGRLLMSF Trigger: GAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGTACGGAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS TCA 90 bp | ATTAACCCAGCTTCAGGCCCTGGAGGGACTATTGCAGCAGTTGGGTaGGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTTGTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: INPASGPGGTIAAVG*GVPFGMTAVCICLI Trigger: GATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGGTTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTCTGCTCATGAGCTTCTaGTCGTTCATCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AHSLHTAPPAHICLPWISLLMSF*SFISCI Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAG...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS CCA 90 bp | AGGCCCTGGAGGGACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTATTTGTCTGATCAAAGGCATTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPWRDYCSSWVRSSV*HDSGLYLSDQRHYG Trigger: ACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGAGCAGCCTGGGCAGTaGCTGCAAGAGAAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSTLLINKNCRTKLTSVCEQPGQ*LQEKRQ Trigger: TTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCTC...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: AHSLHTAPPAHICLPWISDSGLY*SDQRHY Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCCACTCACTACATACAGCACCTCCTGCCCACATCTGCCTACCATGGATTAGTCCATTTAACGTGTCATaGTACATGTCTTTCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AHSLHTAPPAHICLPWISPFNVS*YMSFRT Trigger: AGTACGGAAAGACATGTACAATGACACGTTAAATGG...ACTAATCCATGGTAGGCAGATGTGGGCAGGAGGTGCTGTATGTAGTGAGTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGATCTTTTTATCCCTCATaGAGCCTTTGCCTCGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRSFYPS*SLCLGP Trigger: TGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAGA...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGAGGTGCCATTCAGAATaGCAAGCTCCATCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRRCHSE*QAPSAA Trigger: TGCAGCTGATGGAGCTTGCAATTCTGAATGGCACCT...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTLLINKNCRTKLTSVCGLLQQ*GEEFRL Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTCC...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SITHKRHTSTVLHICFLPSRSRW*KIPQKL Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSSRSRW*KIPQKL Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | AATGGAGCAGAGCAGTCACTGAACACTGTGATGCGGGCTTTCCACGCTCCTTTACCATTTAACGTGTCATaGTACATGTCTTTCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: NGAEQSLNTVMRAFHAPLPFNVS*YMSFRT Trigger: AGTACGGAAAGACATGTACAATGACACGTTAAATGG...TAAAGGAGCGTGGAAAGCCCGCATCACAGTGTTCAGTGACTGCTCTGCTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGTCTTTTTATCCCTCATaGAGCCTTTGCCTCGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRSFYPS*SLCLGP Trigger: TGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAGA...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: INKNCRTKLTSVCGHNPLCSQLG*PLFCSS Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | ATTTCTCTGTGCCTGGGGCAGCTACACTGCCATCTTATTGTTGGCTTGAGAAGATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISLCLGQLHCHLIVGLRRFRCSQ*GLPLFC Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...TCTTCTCAAGCCAACAATAAGATGGCAGTGTAGCTGCCCCAGGCACAGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTGGACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFGLLQQ*GEEFRL Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTCC...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | GGTGTGCAGGTAGACAGTTACATTTTTCCATCAGGTCTGGTGTTGCAAACTTTTCTGCTCATGAGCTTCTaGTCGTTCATCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GVQVDSYIFPSGLVLQTFLLMSF*SFISCI Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAG...AAAAGTTTGCAACACCAGACCTGATGGAAAAATGTAACTGTCTACCTGCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NEKMLSARLESMPLHKSNSRSRW*KIPQKL Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | CTGGCCAGTATCTCTCCAGGGGATAGCAAACTTCAAGTAATGTTGAGCTCCTCTCGTTTCTGCTTCAAGTaGTTTAGCTGTAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASISPGDSKLQVMLSSSRFCFK*FSCKSS Trigger: AGAGGACTTACAGCTAAACAACTTGAAGCAGAAACG...AGAGGAGCTCAACATTACTTGAAGTTTGCTATCCCCTGGAGAGATACTGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | AAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGGTAAGGTCCCTCATTGAGCCTTaGCCTCGGACCATTATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KNCRTKLTSVCGHNPLVRSLIEP*PRTIIL Trigger: TAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGGA...CCTTACCAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | ATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAACAGGGAGGTGCCATTCAGAATaGCAAGCTCCATCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IALLLFSAGSRTTFTQTGRCHSE*QAPSAA Trigger: TGCAGCTGATGGAGCTTGCAATTCTGAATGGCACCT...CCCTGTTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAGAGCAGCCTGGGCAGTaGCTGCAAGAGAAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLQLQNCLTFKRETGEEKEQPGQ*LQEKRQ Trigger: TTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCTC...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAAGGACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKGLLQQ*GEEFRL Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTCC...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCAAAGGACTAATATCATTGTTTTACTGCTTAGGTGGCAAAGCAAGAAATAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSKGLISLFYCLGGKARNKIPQK*GRLLMS Trigger: GCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTT...ATTTCTTGCTTTGCCACCTAAGCAGTAAAACAATGATATTAGTCCTTTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| CDS-3UTR CAA 90 bp | TTCTCCAAAGGACTAATATCATTGTTTTACTGCTTAGGTGGCAAAGCAAGAAATAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSKGLISLFYCLGGKARNSRSRW*KIPQKL Trigger: CAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCT...ATTTCTTGCTTTGCCACCTAAGCAGTAAAACAATGATATTAGTCCTTTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042296.9 |
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| CDS-3UTR CAA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGTCTTTTTATCCCTCATaGAGCCTTTGCCTCGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: INKNCRTKLTSVCGHNPLSFYPS*SLCLGP Trigger: TGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAGA...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SITHKRHTSTVLHICFLPCSQLG*PLFCSS Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAAGGATATCCCCTTCCAGTAAGCAGTTAGAAGACAAAGGAACTTCCAAATGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MKRISPSSKQLEDKGTSKCSQLG*PLFCSS Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...TTTGGAAGTTCCTTTGTCTTCTAACTGCTTACTGGAAGGGGATATCCTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTTGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLCSQLG*PLFCSS Trigger: GGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCA...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRFRCSQ*GLPLFC Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | CTAGATACTCTAAGTGCTTACATACAGACAGTTACATGGTTATATGTCCTCGGGAGGTGCCATTCAGAATaGCAAGCTCCATCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDTLSAYIQTVTWLYVLGRCHSE*QAPSAA Trigger: TGCAGCTGATGGAGCTTGCAATTCTGAATGGCACCT...CCCGAGGACATATAACCATGTAACTGTCTGTATGTAAGCACTTAGAGTATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACGAGCAGCCTGGGCAGTaGCTGCAAGAGAAAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NEKMLSARLESMPLHKSNEQPGQ*LQEKRQ Trigger: TTGCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCTC...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | AGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCCCGGACTATTGCAGCAGTaGGGTGAGGAGTTCCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SITHKRHTSTVLHICFLPGLLQQ*GEEFRL Trigger: CAAACGGAACTCCTCACCCAACTGCTGCAATAGTCC...GGGAAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS CCA 90 bp | GGTATTCTTTTACAGGCACATAAAGTTTCTCTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCAATTCTGCACTTCTTTTCTCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GILLQAHKVSLVTEQ*VPPRQAILHFFSLY Trigger: GTACAGAGAAAAGAAGTGCAGAATTGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACTTTATGTGCCTGTAAAAGAATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTCTGCTCATGAGCTTCTaGTCGTTCATCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLLLMSF*SFISCI Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAG...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTCTGCTCATGAGCTTCTaGTCGTTCATCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ASITHKRHTSTVLHICFLLLMSF*SFISCI Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAG...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCACATTGCTTATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCCGTTTCTGCTTCAAGTaGTTTAGCTGTAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTLLINKNCRTKLTSVCRFCFK*FSCKSS Trigger: AGAGGACTTACAGCTAAACAACTTGAAGCAGAAACG...GCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTATAAGCAATGTGCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGTACATCTAAAATACATCCTCTGCCATGTCCTGGACTCCTACAGTACACACGTTTCTGCTTCAAGTaGTTTAGCTGTAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTSKIHPLPCPGLLQYTRFCFK*FSCKSS Trigger: AGAGGACTTACAGCTAAACAACTTGAAGCAGAAACG...TGTGTACTGTAGGAGTCCAGGACATGGCAGAGGATGTATTTTAGATGTACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | ATAAACAAGAACTGCAGAACTAAACTAACCTCGGTCTGCGGTCACAATCCTTTGTTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: INKNCRTKLTSVCGHNPLFRCSQ*GLPLFC Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...CAAAGGATTGTGACCGCAGACCGAGGTTAGTTTAGTTCTGCAGTTCTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTAGGTGCCATTCAGAATaGCAAGCTCCATCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASITHKRHTSTVLHICFLRCHSE*QAPSAA Trigger: TGCAGCTGATGGAGCTTGCAATTCTGAATGGCACCT...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTTGCGGTCACAATCCTTaGGTAAGGATGGACACGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSCGHNP*VRMDTH Trigger: ATGCGTGTCCATCCTTACCAAAGGATTGTGACCGCA...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | TTCACCTCTTCATTGACAGTCCCCAAGTCACAGTATCTCACGAGCTCTATTAGACCATTTAACGTGTCATaGTACATGTCTTTCCGTACT | + |
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Preference number: 5 (lower is better) Translates to: FTSSLTVPKSQYLTSSIRPFNVS*YMSFRT Trigger: AGTACGGAAAGACATGTACAATGACACGTTAAATGG...TCTAATAGAGCTCGTGAGATACTGTGACTTGGGGACTGTCAATGAAGAGGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAATCTTTTTATCCCTCATaGAGCCTTTGCCTCGGACCA | + |
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Preference number: 5 (lower is better) Translates to: LLQLQNCLTFKRETGEEKSFYPS*SLCLGP Trigger: TGGTCCGAGGCAAAGGCTCAATGAGGGATAAAAAGA...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCTTATTGCTTTACTACTATTCAGTGCAGGTTCTAGAACCACTTTCACCCAAATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: ALLLYYYSVQVLEPLSPKFRCSQ*GLPLFC Trigger: GCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAA...TTTGGGTGAAAGTGGTTCTAGAACCTGCACTGAATAGTAGTAAAGCAATAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCATTACTCATAAACGTCACACGTCTACTGTTTTACACATTTGCTTTCTTTCCCTCATTGAGCCTTaGCCTCGGACCATTATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASITHKRHTSTVLHICFLSLIEP*PRTIIL Trigger: TAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGGA...AAGAAAGCAAATGTGTAAAACAGTAGACGTGTGACGTTTATGAGTAATGCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | GCCTGTTCACAGAAATTTAGGCAAAAGACTCAACAAAGAATCAAACTGGTCTCTTCCCTCATTGAGCCTTaGCCTCGGACCATTATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ACSQKFRQKTQQRIKLVSSLIEP*PRTIIL Trigger: TAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGGA...AGAGACCAGTTTGATTCTTTGTTGAGTCTTTTGCCTAAATTTCTGTGAACAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233645.2 |
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| CDS TCA 90 bp | TTCACTTCTTCAACCGCTCTCTTCAGCTTGATTTCTGCTCTGTTCTaGGCATCTTCCACAGTGATTAGTACATGTAAGTCTTCATTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FTSSTALFSLISALF*ASSTVISTCKSSFR Trigger: TCTAAATGAAGACTTACATGTACTAATCACTGTGGAAGATGCTCAGAACAGAGCAGAAATCAAGCTGAAGAGAGCGGTTGAAGAAGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | ACTAAGCATTTGTTAAATTCAGATCTGATGAGGGTTCGGTTAAGACCGTTCTTGCGTTTCTGCTTCAAGTaGTTTAGCTGTAAGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKHLLNSDLMRVRLRPFLRFCFK*FSCKSS Trigger: AGAGGACTTACAGCTAAACAACTTGAAGCAGAAACG...CAAGAACGGTCTTAACCGAACCCTCATCAGATCTGAATTTAACAAATGCTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTCAACTACAAAACTGTTTGACTTTCAAGAGAGAAACTGGAGAGGAGAAAGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQLQNCLTFKRETGEEKDSGLY*SDQRHY Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...TTTCTCCTCTCCAGTTTCTCTCTTGAAAGTCAAACAGTTTTGTAGTTGAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097414.11 ENSMUST00000233645.2 |
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| CDS-3UTR CAA 90 bp | AGCTCCTTCTTTAATCAACCTCTCACATTCTACTTCATCAAACTTGGTCCACTTGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SSFFNQPLTFYFIKLGPLDSGLY*SDQRHY Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...AAGTGGACCAAGTTTGATGAAGTAGAATGTGAGAGGTTGATTAAAGAAGGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTTCCCTCATTGAGCCTTaGCCTCGGACCATTATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SQLVFKFQTNCEITMEVGSLIEP*PRTIIL Trigger: TAAAATAATGGTCCGAGGCAAAGGCTCAATGAGGGA...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AATGAAAAGATGCTCAGTGCAAGGTTAGAGTCTATGCCACTTCATAAATCAAACGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: NEKMLSARLESMPLHKSNDSGLY*SDQRHY Trigger: ATAATGCCTTTGATCAGACAAATACAGACCGCTGTC...GTTTGATTTATGAAGTGGCATAGACTCTAACCTTGCACTGAGCATCTTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGTTGGTCTTTAAGTTTCAAACCAATTGTGAAATAACTATGGAAGTGGGTCCATTTAACGTGTCATaGTACATGTCTTTCCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SQLVFKFQTNCEITMEVGPFNVS*YMSFRT Trigger: AGTACGGAAAGACATGTACAATGACACGTTAAATGG...ACCCACTTCCATAGTTATTTCACAATTGGTTTGAAACTTAAAGACCAACTGACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042296.9 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | GGTAGGGCCAGCTGGCGTAGGTGTACGCAGAGCAGCTaGTGGGAGGACAGGCGCAGGCCCAGTGATGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRASWRRCTQSS*WEDRRRPSDDP Trigger: AGGATCATCACTGGGCCTGCGCCTGTCCTCCCACCAGCTGCTCTGCGTACACCTACGCCAGCTGGCCCTACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | TGGTGGGAGGACAGGCGCAGGCCCAGTGATGATCCTTaGAGCAGCCTGGGCAGTTGCTGCAAGAGAAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WWEDRRRPSDDP*SSLGSCCKRKG Trigger: GCCTTTTCTCTTGCAGCAACTGCCCAGGCTGCTCCAAGGATCATCACTGGGCCTGCGCCTGTCCTCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | CCCAGCTTCAGGCCCTGGAGGGACTATTGCAGCAGTTaGGTGAGGAGTTCCGTTTGGCATGACAGCGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSFRPWRDYCSS*VRSSVWHDSGL Trigger: CAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTCCCTCCAGGGCCTGAAGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CAA 90 bp | TCTTCGTCCAGCAGCCGCTCGAGGTGGTTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGCTTCTTGTCGTTCATCAGCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSRSRWLKIPQK*GRLLMSFLSFISCI Trigger: GATGCAGCTGATGAACGACAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | ACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTaGTTGAAGATCCCGCAGAAGTTGGGCAGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLLISSSSSRSR*LKIPQKLGRLL Trigger: GAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CAA 72 bp | AGCAGCCGCTCGAGGTGGTTGAAGATCCCGCAGAAGTaGGGCAGGCTGCTCATGAGCTTCTTGTCGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRWLKIPQK*GRLLMSFLSFI Trigger: GATGAACGACAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CAA 72 bp | CTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLISSSSSRSRW*KIPQKLGRLLM Trigger: CATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CAA 90 bp | TTCCGTACTCTGCTAATTTCTTCGTCCAGCAGCCGCTCGAGGTGGTaGAAGATCCCGCAGAAGTTGGGCAGGCTGCTCATGAGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FRTLLISSSSSRSRW*KIPQKLGRLLMSFL Trigger: CAAGAAGCTCATGAGCAGCCTGCCCAACTTCTGCGGGATCTTCAACCACCTCGAGCGGCTGCTGGACGAAGAAATTAGCAGAGTACGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | TATTTGTCTGATCAAAGGCATTATGGTAGGGCCAGCTaGCGTAGGTGTACGCAGAGCAGCTGGTGGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YLSDQRHYGRAS*RRCTQSSWWED Trigger: GTCCTCCCACCAGCTGCTCTGCGTACACCTACGCCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CAA 90 bp | AGCAGTTGGGTGAGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTATGGTAGGGCCAGCTGGCGTAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSWVRSSVWHDSGLY*SDQRHYGRASWRRC Trigger: ACACCTACGCCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CAA 72 bp | GTGAGGAGTTCCGTTTGGCATGACAGCGGTCTGTATTaGTCTGATCAAAGGCATTATGGTAGGGCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRSSVWHDSGLY*SDQRHYGRASW Trigger: CCAGCTGGCCCTACCATAATGCCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | TCTTGTCGTTCATCAGCTGCATCAAATAATCTGGGGTaGGCTTCGGCTTCTCCTTCGTTTCCATTTCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SCRSSAASNNLG*ASASPSFPFPR Trigger: TCGGGGAAATGGAAACGAAGGAGAAGCCGAAGCCCACCCCAGATTATTTGATGCAGCTGATGAACGACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | AGGGACTATTGCAGCAGTTGGGTGAGGAGTTCCGTTTaGCATGACAGCGGTCTGTATTTGTCTGATCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RDYCSSWVRSSV*HDSGLYLSDQR Trigger: CCTTTGATCAGACAAATACAGACCGCTGTCATGCCAAACGGAACTCCTCACCCAACTGCTGCAATAGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CCA 72 bp | TTACAGGCACATAAAGTTTCTCTTGTAACTGAACAATaGGTCCCACCGCGTCAGGCAATTCTGCACTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQAHKVSLVTEQ*VPPRQAILHFF Trigger: AAAGAAGTGCAGAATTGCCTGACGCGGTGGGACCCATTGTTCAGTTACAAGAGAAACTTTATGTGCCTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233684.2 ENSMUST00000233828.2 |
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| CDS CAA 90 bp | GGCAATTCTGCACTTCTTTTCTCTGTACTGCCATTTAACGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTTCGTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GNSALLFSVLPFNVS*YMSFRTLLISSSSS Trigger: GCTGCTGGACGAAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACGTTAAATGGCAGTACAGAGAAAAGAAGTGCAGAATTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CAA 90 bp | TCCACAGTGATTAGTACATGTAAGTCTTCATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGCTCCTCATCAGGGTATTCTTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: STVISTCKSSFRCSQ*GLPLFCSSSGYSFT Trigger: TGTAAAAGAATACCCTGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTTACATGTACTAATCACTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233684.2 |
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| CDS GCA 72 bp | CATGTAAGTCTTCATTTAGATGCTCCCAATTGGGCTTaGCTCTATTTTGCTCCTCATCAGGGTATTCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HVSLHLDAPNWA*LYFAPHQGILL Trigger: TAAAAGAATACCCTGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTTACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233684.2 |
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| CDS CCA 72 bp | TTAGTACATGTAAGTCTTCATTTAGATGCTCCCAATTaGGCTTGCCTCTATTTTGCTCCTCATCAGGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LVHVSLHLDAPN*ACLYFAPHQGI Trigger: AATACCCTGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTTACATGTACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233684.2 |
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| CDS CAA 72 bp | GCACTTCTTTTCTCTGTACTGCCATTTAACGTGTCATaGTACATGTCTTTCCGTACTCTGCTAATTTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ALLFSVLPFNVS*YMSFRTLLISS Trigger: CGAAGAAATTAGCAGAGTACGGAAAGACATGTACAATGACACGTTAAATGGCAGTACAGAGAAAAGAAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042296.9 ENSMUST00000097414.11 ENSMUST00000233645.2 ENSMUST00000233828.2 |
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| CDS CAA 72 bp | ACATGTAAGTCTTCATTTAGATGCTCCCAATTGGGCTaGCCTCTATTTTGCTCCTCATCAGGGTATTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TCKSSFRCSQLG*PLFCSSSGYSF Trigger: AAAAGAATACCCTGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTTACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233684.2 |
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| CDS CAA 72 bp | ATTAGTACATGTAAGTCTTCATTTAGATGCTCCCAATaGGGCTTGCCTCTATTTTGCTCCTCATCAGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ISTCKSSFRCSQ*GLPLFCSSSGY Trigger: ATACCCTGATGAGGAGCAAAATAGAGGCAAGCCCAATTGGGAGCATCTAAATGAAGACTTACATGTACTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233684.2 |
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