Pregenerated sensors for QDPR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015806Ensembl transcript IDs: ENSMUST00000015950.12, ENSMUST00000117425.8, ENSMUST00000118097.8, ENSMUST00000120867.8, ENSMUST00000127562.3, ENSMUST00000154962.8, ENSMUST00000197946.5, ENSMUST00000198258.5
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTCCATATACCTCCCTGGACCCTCAGGTGCTACCTACAGGCCTCTaGTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAG | + |
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Preference number: 1 (lower is better) Translates to: CPYTSLDPQVLPTGL*SFPINIPHHPRTTK Trigger: CTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCTGTAGGTAGCACCTGAGGGTCCAGGGAGGTATATGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 90 bp | AACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATaGGGCCAGATTCGGCAATACAGACAGGTTAGTGATGTTTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: NKTGYLLPQTGIQKT*GQIRQYRQVSDVSR Trigger: TCTCGAAACATCACTAACCTGTCTGTATTGCCGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 90 bp | CATCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTaGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: HPRTTKECHVRNKQD*LSPTTNRNTENMGP Trigger: TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 90 bp | CTTAGCCTAGGCTGGAACACAAAAGGATATCACAACAGAGTCCATTaGGTTTTACTTGCTTACATCACCAAAGAATGTTCATGGCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: LSLGWNTKGYHNRVH*VLLAYITKECSWQL Trigger: TAACTGCCATGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTGTGTTCCAGCCTAGGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTGTGATGCAGGCCTGTCCATATACCTCCCTGGACCCTCAGGTGCTACCAGAAACAAACAAGACTaGTTATCTCCTACCACAAAC | + |
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Preference number: 2 (lower is better) Translates to: GCCDAGLSIYLPGPSGATRNKQD*LSPTTN Trigger: GTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCT...GGTAGCACCTGAGGGTCCAGGGAGGTATATGGACAGGCCTGCATCACAGCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTCTACCTACAGGCCTCTaGTCATTTCCCATAAACATA | + |
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Preference number: 2 (lower is better) Translates to: VFIRKNTPSTHKWLSQTLLPTGL*SFPINI Trigger: TATGTTTATGGGAAATGAGCAGAGGCCTGTAGGTAG...AAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTACCTACAGGCCTCTaGTCATTTCCCATAAACATA | + |
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Preference number: 2 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTLPTGL*SFPINI Trigger: TATGTTTATGGGAAATGAGCAGAGGCCTGTAGGTAG...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACCAAATGCCAAAAACTaGAAGTACTATCAAACGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTPNAKN*KYYQTG Trigger: ACCCGTTTGATAGTACTTTCAGTTTTTGGCATTTGG...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACACTACCTACAGGCCTCTaGTCATTTCCCATAAACATA | + |
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Preference number: 2 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTLPTGL*SFPINI Trigger: TATGTTTATGGGAAATGAGCAGAGGCCTGTAGGTAG...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACCAAATGCCAAAAACTaGAAGTACTATCAAACGGGT | + |
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Preference number: 2 (lower is better) Translates to: CLLGRTLQALTNGFHKHLPNAKN*KYYQTG Trigger: ACCCGTTTGATAGTACTTTCAGTTTTTGGCATTTGG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTCCATTGGGTTTTACTTaGTTACATCACCAAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: VFIRKNTPSTHKWLSQTLPLGFT*LHHQRM Trigger: CATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGG...AAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACCATTGGGTTTTACTTaGTTACATCACCAAAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTPLGFT*LHHQRM Trigger: CATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGG...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACACAACAGAGTCCATTaGGTTTTACTTGCTTACATC | + |
|
Preference number: 2 (lower is better) Translates to: CLLGRTLQALTNGFHKHLHNRVH*VLLAYI Trigger: GATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACCATTGGGTTTTACTTaGTTACATCACCAAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: CLLGRTLQALTNGFHKHLPLGFT*LHHQRM Trigger: CATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCCATTGGGTTTTACTTGCTTACATCACCAAAGAATGTTCATGGCAGTTAATTCAAAGTACCCCAAATaGCAAAAACTGAAAGTACTA | + |
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Preference number: 2 (lower is better) Translates to: SPLGFTCLHHQRMFMAVNSKYPK*QKLKVL Trigger: TAGTACTTTCAGTTTTTGGCATTTGGGGTACTTTGA...ATTAACTGCCATGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR-3UTR GCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACATCAAAGTACCCCAAATaGCAAAAACTGAAAGTACTA | + |
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Preference number: 2 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTSKYPK*QKLKVL Trigger: TAGTACTTTCAGTTTTTGGCATTTGGGGTACTTTGA...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 72 bp | GGTTATCTCCTACCACAAACAGGAATACAGAAAACATaGGGCCAGATTCGGCAATACAGACAGGTTAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: GYLLPQTGIQKT*GQIRQYRQVSD Trigger: ATCACTAACCTGTCTGTATTGCCGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 72 bp | GTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATaGCTTTCACAAACACTTAGCCTAGGCTGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: VFIRKNTPSTHK*LSQTLSLGWNT Trigger: TGTGTTCCAGCCTAGGCTAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR GCA 72 bp | ATAAACATACCTCACCATCCCAGGACAACAAAGGAATaGCATGTAAGAAACAAACAAGACTGGTTATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: INIPHHPRTTKE*HVRNKQDWLSP Trigger: AGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR CCA 72 bp | GGCTGGAACACAAAAGGATATCACAACAGAGTCCATTaGGTTTTACTTGCTTACATCACCAAAGAATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: GWNTKGYHNRVH*VLLAYITKECS Trigger: TGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTGTGTTCCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| 3UTR TCA 72 bp | CAAGTTGGATTTCAAAGTACCCCAAATGCCAAAAACTaGAAGTACTATCAAACGGGTCTCCAAAGAAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: QVGFQSTPNAKN*KYYQTGLQRSL Trigger: TAGACTTCTTTGGAGACCCGTTTGATAGTACTTTCAGTTTTTGGCATTTGGGGTACTTTGAAATCCAACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR CCA 90 bp | GGATGCTGTGATGCAGGCCTGTCCATATACCTCCCTGGACCCTCAGGTGCTACCGATGGACGGCTCCCTTaGCCATGCCATAGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: GCCDAGLSIYLPGPSGATDGRLP*PCHSRS Trigger: TGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATC...GGTAGCACCTGAGGGTCCAGGGAGGTATATGGACAGGCCTGCATCACAGCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR GCA 90 bp | GGATGCTGTGATGCAGGCCTGTCCATATACCTCCCTGGACCCTCAGGTGCTACCTCTCCACCACATCGATaGTGGCAACCCACCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GCCDAGLSIYLPGPSGATSPPHR*WQPTSC Trigger: GCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGA...GGTAGCACCTGAGGGTCCAGGGAGGTATATGGACAGGCCTGCATCACAGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS-3UTR CCA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGATTGGGAGCACAGCAATaGCAGCAGCCCCAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RPLLISHKHTSPSQDNKGLGAQQ*QQPQGA Trigger: TGCCCCCTGGGGCTGCTGCCATTGCTGTGCTCCCAA...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197946.5 |
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| CDS-3UTR GCA 90 bp | CTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCCACAGCCCCAGGGGGCATaGCACTGTTCTTCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLISHKHTSPSQDNKGMPQPQGA*HCSSLP Trigger: TGGCAGGGAAGAACAGTGGCATGCCCCCTGGGGCTG...TGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR TCA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: RPLLISHKHTSPSQDNKGRVSRS*SLPQAL Trigger: CAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCT...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGAGCCCAGAGCGCCCCTaGCGCCGTACACCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: QKDITTESIGFYLLTSPKSPERP*RRTPAP Trigger: GGGTGCTGGTGTACGGCGGCAGGGGCGCTCTGGGCT...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS-3UTR GCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGCCCAGAGCGCCCCTaGCGCCGTACACCAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYSPERP*RRTPAP Trigger: GGGTGCTGGTGTACGGCGGCAGGGGCGCTCTGGGCT...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS-3UTR TCA 90 bp | CTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCCAAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: LLISHKHTSPSQDNKGMPRVSRS*SLPQAL Trigger: CAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCT...TGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS-3UTR CCA 90 bp | CTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCGATGGACGGCTCCCTTaGCCATGCCATAGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: LCSFPINIPHHPRTTKECDGRLP*PCHSRS Trigger: TGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATC...GCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR CCA 90 bp | GACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGGATGGACGGCTCCCTTaGCCATGCCATAGCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: DWLSPTTNRNTENMGPDSDGRLP*PCHSRS Trigger: TGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATC...CGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR TCA 90 bp | CTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCTTCCAACATCAGCAGTaGCCTGGTCAGCCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCSFPINIPHHPRTTKECFQHQQ*PGQPAL Trigger: CAGAGCAGGCTGACCAGGTCACTGCTGATGTTGGAA...GCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR TCA 90 bp | ACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGAAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: TRLVISYHKQEYRKHGARRVSRS*SLPQAL Trigger: CAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCT...TCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS-3UTR GCA 90 bp | CTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCTCTCCACCACATCGATaGTGGCAACCCACCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LCSFPINIPHHPRTTKECSPPHR*WQPTSC Trigger: GCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGA...GCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS-3UTR GCA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCCGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQDNKGMPCKKQTRLVISRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR CCA 90 bp | CTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCCAAAAGCGACTTGGATTTaGCATTGCCCCCGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LLISHKHTSPSQDNKGMPKATWI*HCPRPI Trigger: GATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTT...TGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR GCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACACAGCCCCAGGGGGCATaGCACTGTTCTTCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTQPQGA*HCSSLP Trigger: TGGCAGGGAAGAACAGTGGCATGCCCCCTGGGGCTG...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR GCA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGCAGCCCCAGGGGGCATaGCACTGTTCTTCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKDITTESIGFYLLTSPKQPQGA*HCSSLP Trigger: TGGCAGGGAAGAACAGTGGCATGCCCCCTGGGGCTG...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR GCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACCAGCCCCAGGGGGCATaGCACTGTTCTTCCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYQPQGA*HCSSLP Trigger: TGGCAGGGAAGAACAGTGGCATGCCCCCTGGGGCTG...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCGATGGACGGCTCCCTTaGCCATGCCATAGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: SQDNKGMPCKKQTRLVISDGRLP*PCHSRS Trigger: TGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATC...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGACCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLLISHKHTSPSQDNKGPVIQS*KVSTRN Trigger: GTTCCTGGTGGAAACCTTCCATGACTGGATCACTGG...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSFPINIPHHPRTTKECAVCSQ*SSHGRF Trigger: AAACCTTCCATGACTGGATCACTGGGAACAAACGGC...GCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR GCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACCGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCAAAGCGACTTGGATTTaGCATTGCCCCCGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQDNKGMPCKKQTRLVISKATWI*HCPRPI Trigger: GATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTT...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCACCAGTCATGGAAGGTTaGGAGCACAGCAATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQDWLSPTTNRNTENMGPPVMEG*EHSNGS Trigger: GCTGCCATTGCTGTGCTCCCAACCTTCCATGACTGG...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197946.5 |
||
| CDS-3UTR TCA 90 bp | GTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFIRKNTPSTHKWLSQTLRVSRS*SLPQAL Trigger: CAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCT...AAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYRVSRS*SLPQAL Trigger: CAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCT...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGAGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRLVISYHKQEYRKHGARAVCSQ*SSHGRF Trigger: AAACCTTCCATGACTGGATCACTGGGAACAAACGGC...TCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQDWLSPTTNRNTENMGPAVCSQ*SSHGRL Trigger: CAACCTTCCATGACTGGATCACTGGGAACAAACGGC...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAACTTGGATTTGGCATTaGCCCCGGCCCATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTTWIWH*PRPILQ Trigger: CTGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGT...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACACGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLGRTLQALTNGFHKHLRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAGATGGACGGCTCCCTTaGCCATGCCATAGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTDGRLP*PCHSRS Trigger: TGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATC...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAAGCCTGCTCTGTGAATaGATCTGTCATCTTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPLLISHKHTSPSQDNKGSLLCE*ICHLNN Trigger: GTTGTTAAGATGACAGATTCATTCACAGAGCAGGCT...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
||
| CDS-3UTR TCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACATTCCAACATCAGCAGTaGCCTGGTCAGCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTFQHQQ*PGQPAL Trigger: CAGAGCAGGCTGACCAGGTCACTGCTGATGTTGGAA...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGTGACCTGGTCAGCCTaGTCTGTGAATGAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQDWLSPTTNRNTENMGPVTWSA*SVNESV Trigger: GACAGATTCATTCACAGAGCAGGCTGACCAGGTCAC...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACAACTTGGATTTGGCATTaGCCCCGGCCCATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTTWIWH*PRPILQ Trigger: CTGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGT...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTAACTTGGATTTGGCATTaGCCCCGGCCCATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLLGRTLQALTNGFHKHLTWIWH*PRPILQ Trigger: CTGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGT...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | CACCAAAGAATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGCGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRMFMAVNFQAVKTTSMRLPWP*HSRSSQ Trigger: CTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCG...CATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACATTCTTTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAACATCAGCAGTGACCTaGTCAGCCTGCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDWLSPTTNRNTENMGPTSAVT*SACSVN Trigger: ATTCACAGAGCAGGCTGACCAGGTCACTGCTGATGT...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACAAAAGCGACTTGGATTTaGCATTGCCCCCGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTKATWI*HCPRPI Trigger: GATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTT...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CCA 90 bp | CTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCCATCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLISHKHTSPSQDNKGMPSVVTT*IRLPEF Trigger: AAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGA...TGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCTCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCSFPINIPHHPRTTKECSVVTT*IRLPEF Trigger: AAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGA...GCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTATTCCAACATCAGCAGTaGCCTGGTCAGCCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CLLGRTLQALTNGFHKHLFQHQQ*PGQPAL Trigger: CAGAGCAGGCTGACCAGGTCACTGCTGATGTTGGAA...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR GCA 90 bp | CACCAAAGAATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGACTTGGATTTGGCATTaGCCCCGGCCCATCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRMFMAVNFQAVKTTSMTWIWH*PRPILQ Trigger: CTGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGT...CATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACATTCTTTGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACAAAAGCGACTTGGATTTaGCATTGCCCCCGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTKATWI*HCPRPI Trigger: GATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTT...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR TCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYAVCSQ*SSHGRF Trigger: AAACCTTCCATGACTGGATCACTGGGAACAAACGGC...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGACATCAGCAGTGACCTaGTCAGCCTGCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QKDITTESIGFYLLTSPKTSAVT*SACSVN Trigger: ATTCACAGAGCAGGCTGACCAGGTCACTGCTGATGT...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAACATCAGCAGTGACCTaGTCAGCCTGCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTTSAVT*SACSVN Trigger: ATTCACAGAGCAGGCTGACCAGGTCACTGCTGATGT...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATAAAGCGACTTGGATTTaGCATTGCCCCCGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KKQTRLVISYHKQEYRKHKATWI*HCPRPI Trigger: GATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTT...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | ATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACCCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MPCKKQTRLVISYHKQEYPVIQS*KVSTRN Trigger: GTTCCTGGTGGAAACCTTCCATGACTGGATCACTGG...GTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFIRKNTPSTHKWLSQTPVIQS*KVSTRN Trigger: GTTCCTGGTGGAAACCTTCCATGACTGGATCACTGG...TGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | TTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGGCAATAAGCCTGCTCTGTGAATaGATCTGTCATCTTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSPTTNRNTENMGPDSAISLLCE*ICHLNN Trigger: GTTGTTAAGATGACAGATTCATTCACAGAGCAGGCT...TATTGCCGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACAATTGCATCCACCTTCTaGTCACCTAGGAGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTIASTF*SPRSFP Trigger: TGGAAAGCTCCTAGGTGACCAGAAGGTGGATGCAAT...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACACCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTPVIQS*KVSTRN Trigger: GTTCCTGGTGGAAACCTTCCATGACTGGATCACTGG...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR TCA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KKQTRLVISYHKQEYRKHAVCSQ*SSHGRF Trigger: AAACCTTCCATGACTGGATCACTGGGAACAAACGGC...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATACATCAGCAGTGACCTaGTCAGCCTGCTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KKQTRLVISYHKQEYRKHTSAVT*SACSVN Trigger: ATTCACAGAGCAGGCTGACCAGGTCACTGCTGATGT...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CCA 90 bp | CACCAAAGAATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGCCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HQRMFMAVNFQAVKTTSMPVIQS*KVSTRN Trigger: GTTCCTGGTGGAAACCTTCCATGACTGGATCACTGG...CATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACATTCTTTGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGTCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKDITTESIGFYLLTSPKSVVTT*IRLPEF Trigger: AAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGA...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | ACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCTACCACATCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTKECHVRNKQDWLSPTTSVVTT*IRLPEF Trigger: AAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGA...TGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CCA 90 bp | AGTCCATTGGGTTTTACTTGCTTACATCACCAAAGAATGTTCATGGCAGTTAATTCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLGFTCLHHQRMFMAVNSVVTT*IRLPEF Trigger: AAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGA...ATTAACTGCCATGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| 3UTR CAA 72 bp | AGGCTGGAACACAAAAGGATATCACAACAGAGTCCATaGGGTTTTACTTGCTTACATCACCAAAGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLEHKRISQQSP*GFTCLHHQRMF Trigger: GAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTGTGTTCCAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS GCA 90 bp | TGCGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCCAGAGCGCCCCTaGCGCCGTACACCAGCACCCGGCGCGCCTCGCCTGAAGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGPGRPVRSASPERP*RRTPAPGAPRLKPP Trigger: TGGCGGCTTCAGGCGAGGCGCGCCGGGTGCTGGTGTACGGCGGCAGGGGCGCTCTGGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015950.12 ENSMUST00000127562.3 ENSMUST00000154962.8 ENSMUST00000197946.5 |
||
| CDS GCA 90 bp | CACAGCAATGGCAGCAGCCCCAGGGGGCATGCCACTGTTCTTCCCTaGCAGGCTCTGGCAGAGCTGATGGACGGCTCCCTTGGCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSNGSSPRGHATVLP*QALAELMDGSLGHA Trigger: GGCATGGCCAAGGGAGCCGTCCATCAGCTCTGCCAGAGCCTGGCAGGGAAGAACAGTGGCATGCCCCCTGGGGCTGCTGCCATTGCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS CCA 90 bp | GTGATCCCCCAGAGGACTTTAGAATTGGCAGACAGAGAACACAGCTaGCAGAACCTTCCCTGGGCCTCTCCCAGTTGCGGGCCCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIPQRTLELADREHS*QNLPWASPSCGPGR Trigger: CCTTCCGGGCCCGCAACTGGGAGAGGCCCAGGGAAGGTTCTGCCAGCTGTGTTCTCTGTCTGCCAATTCTAAAGTCCTCTGGGGGATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154962.8 |
||
| CDS CCA 90 bp | CCCCCGGCCCATCCTCCAGCCACACAGAGAATTGCATCCACCTTCTaGTCACCTAGGAGCTTTCCAACATCAGCAGTGACCTGGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAHPPATQRIASTF*SPRSFPTSAVTWSA Trigger: GGCTGACCAGGTCACTGCTGATGTTGGAAAGCTCCTAGGTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTGGAGGATGGGCCGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000127562.3 ENSMUST00000197946.5 |
||
| CDS GCA 90 bp | GCAGCTTTGGCCCCAGCCAGGGTCAAGAGGCCTCCTTCCTTCAGGTaGTTTGTGGCCAAGTGGCTGGAGATAGTGGATGTCCACATACTC | + |
|
Preference number: 5 (lower is better) Translates to: AALAPARVKRPPSFR*FVAKWLEIVDVHIL Trigger: GAGTATGTGGACATCCACTATCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAGGAGGCCTCTTGACCCTGGCTGGGGCCAAAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000154962.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS CCA 90 bp | GCCAGGGTCAAGAGGCCTCCTTCCTTCAGGTGCTTTGTGGCCAAGTaGCTGGAGATAGTGGATGTCCACATACTCTGCTTCCACATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ARVKRPPSFRCFVAK*LEIVDVHILCFHIM Trigger: CATGATGTGGAAGCAGAGTATGTGGACATCCACTATCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAGGAGGCCTCTTGACCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000154962.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | GACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGCCATCCAAGGCAGCTTaGGCCCCAGCCAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DWLSPTTNRNTENMGPDSPSKAA*APARVK Trigger: CTTGACCCTGGCTGGGGCCAAAGCTGCCTTGGATGG...CGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS TCA 90 bp | AGTCATGGAAGGTTTCCACCAGGAACTCTAAGGGTGTCCAGGAGCTaGAGTCTGCCTCAGGCATTGATTTCCTGTTCATCGGGGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHGRFPPGTLRVSRS*SLPQALISCSSGYP Trigger: TGGATACCCCGATGAACAGGAAATCAATGCCTGAGGCAGACTTCAGCTCCTGGACACCCTTAGAGTTCCTGGTGGAAACCTTCCATGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS TCA 90 bp | TTACCACCTGGATTAGGCTTCCTGAGTTTGGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTTCCACCAGGAACTCTAAGGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPGLGFLSLAVCSQ*SSHGRFPPGTLRVS Trigger: GGACACCCTTAGAGTTCCTGGTGGAAACCTTCCATGACTGGATCACTGGGAACAAACGGCCAAACTCAGGAAGCCTAATCCAGGTGGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGACTTCCTTCAGGTGCTTaGTGGCCAAGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RPLLISHKHTSPSQDNKGLPSGA*WPSGWR Trigger: TCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAG...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCACCATCCAAGGCAGCTTaGGCCCCAGCCAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KQDWLSPTTNRNTENMGPPSKAA*APARVK Trigger: CTTGACCCTGGCTGGGGCCAAAGCTGCCTTGGATGG...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | AGGCCTCTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGACAGCCACACAGAGAATaGCATCCACCTTCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RPLLISHKHTSPSQDNKGQPHRE*HPPSGH Trigger: GTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTG...TCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAGAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | AAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGACTTGGATTTGGCATaGCCCCCGGCCCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQDWLSPTTNRNTENMGPDLDLA*PPAHPP Trigger: TGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTC...TGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | TTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGGCAATAGACTTGGATTTGGCATaGCCCCCGGCCCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPTTNRNTENMGPDSAIDLDLA*PPAHPP Trigger: TGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTC...TATTGCCGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCGACTTGGATTTGGCATaGCCCCCGGCCCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQDNKGMPCKKQTRLVISDLDLA*PPAHPP Trigger: TGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTC...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS CCA 90 bp | AAATATGCTGGAGTAAGCTCTGTCTTCCCATCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTTGGCCGTTTGTTCCCAGTGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KYAGVSSVFPSVVTT*IRLPEFGRLFPVIQ Trigger: CTGGATCACTGGGAACAAACGGCCAAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGATGGGAAGACAGAGCTTACTCCAGCATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | CTGCTCATTTCCCATAAACATACCTCACCATCCCAGGACAACAAAGGAATGCCACAGCCACACAGAGAATaGCATCCACCTTCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLISHKHTSPSQDNKGMPQPHRE*HPPSGH Trigger: GTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTG...TGGCATTCCTTTGTTGTCCTGGGATGGTGAGGTATGTTTATGGGAAATGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | GACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGCAGCCACACAGAGAATaGCATCCACCTTCTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DWLSPTTNRNTENMGPDSQPHRE*HPPSGH Trigger: GTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTG...CGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGACTTCCTTCAGGTGCTTaGTGGCCAAGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRLVISYHKQEYRKHGARLPSGA*WPSGWR Trigger: TCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAG...TCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGCCATCCAAGGCAGCTTaGGCCCCAGCCAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QKDITTESIGFYLLTSPKPSKAA*APARVK Trigger: CTTGACCCTGGCTGGGGCCAAAGCTGCCTTGGATGG...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | GACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATTCGAGTCTGCCTCAGGCATaGATTTCCTGTTCATCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DWLSPTTNRNTENMGPDSSLPQA*ISCSSG Trigger: CCCCGATGAACAGGAAATCAATGCCTGAGGCAGACT...CGAATCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGATCCAGTCATGGAAGGTaGGGAGCACAGCAATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TRLVISYHKQEYRKHGARSSHGR*GAQQWQ Trigger: CTGCCATTGCTGTGCTCCCAACCTTCCATGACTGGA...TCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCAAAAGCGACTTGGATTaGGCATTGCCCCCGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQDNKGMPCKKQTRLVISKSDLD*ALPPAH Trigger: ATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTTT...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACACCATCCAAGGCAGCTTaGGCCCCAGCCAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTPSKAA*APARVK Trigger: CTTGACCCTGGCTGGGGCCAAAGCTGCCTTGGATGG...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACCATCCAAGGCAGCTTaGGCCCCAGCCAGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLGRTLQALTNGFHKHLPSKAA*APARVK Trigger: CTTGACCCTGGCTGGGGCCAAAGCTGCCTTGGATGG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | ACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGGGGCCAGAAGTCTGCCTCAGGCATaGATTTCCTGTTCATCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRLVISYHKQEYRKHGARSLPQA*ISCSSG Trigger: CCCCGATGAACAGGAAATCAATGCCTGAGGCAGACT...TCTGGCCCCATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | AGTCCATTGGGTTTTACTTGCTTACATCACCAAAGAATGTTCATGGCAGTTAATGACTTGGATTTGGCATaGCCCCCGGCCCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLGFTCLHHQRMFMAVNDLDLA*PPAHPP Trigger: TGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTC...ATTAACTGCCATGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | TCCCAGGACAACAAAGGAATGCCATGTAAGAAACAAACAAGACTGGTTATCTCCAGTCTGCCTCAGGCATaGATTTCCTGTTCATCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQDNKGMPCKKQTRLVISSLPQA*ISCSSG Trigger: CCCCGATGAACAGGAAATCAATGCCTGAGGCAGACT...GGAGATAACCAGTCTTGTTTGTTTCTTACATGGCATTCCTTTGTTGTCCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
||
| CDS-3UTR CAA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATGACTTGGATTTGGCATaGCCCCCGGCCCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KKQTRLVISYHKQEYRKHDLDLA*PPAHPP Trigger: TGGAGGATGGGCCGGGGGCAATGCCAAATCCAAGTC...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
||
| CDS-3UTR CAA 90 bp | GTGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTCTTCCTTCAGGTGCTTaGTGGCCAAGTGGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VFIRKNTPSTHKWLSQTLLPSGA*WPSGWR Trigger: TCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAG...AAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS GCA 90 bp | TGCTTTGTGGCCAAGTGGCTGGAGATAGTGGATGTCCACATACTCTaGTTCCACATCATGTCACAGTTTTTAAAAAGCGACTTGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: CFVAKWLEIVDVHIL*FHIMSQFLKSDLDL Trigger: CAAATCCAAGTCGCTTTTTAAAAACTGTGACATGATGTGGAAGCAGAGTATGTGGACATCCACTATCTCCAGCCACTTGGCCACAAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000154962.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | CAAAAGGATATCACAACAGAGTCCATTGGGTTTTACTTGCTTACATCACCAAAGCAGCCACACAGAGAATaGCATCCACCTTCTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: QKDITTESIGFYLLTSPKQPHRE*HPPSGH Trigger: GTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTG...CTTTGGTGATGTAAGCAAGTAAAACCCAATGGACTCTGTTGTGATATCCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | ATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGGCACCAACAAAAAGCGACTTGGATTaGGCATTGCCCCCGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: MFMAVNFQAVKTTSMAPTKSDLD*ALPPAH Trigger: ATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTTT...TGTTGGTGCCATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | AGTCCATTGGGTTTTACTTGCTTACATCACCAAAGAATGTTCATGGCAGTTAATAAAAGCGACTTGGATTaGGCATTGCCCCCGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: SPLGFTCLHHQRMFMAVNKSDLD*ALPPAH Trigger: ATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTTT...ATTAACTGCCATGAACATTCTTTGGTGATGTAAGCAAGTAAAACCCAATGGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | TGTTTATTAGGAAGAACACTCCAAGCACTCACAAATGGCTTTCACAAACACTTACTTCCTTCAGGTGCTTaGTGGCCAAGTGGCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CLLGRTLQALTNGFHKHLLPSGA*WPSGWR Trigger: TCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAG...TAAGTGTTTGTGAAAGCCATTTGTGAGTGCTTGGAGTGTTCTTCCTAATAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR CAA 90 bp | CACCAAAGAATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGAAAAGCGACTTGGATTaGGCATTGCCCCCGGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: HQRMFMAVNFQAVKTTSMKSDLD*ALPPAH Trigger: ATGGGCCGGGGGCAATGCCAAATCCAAGTCGCTTTT...CATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACATTCTTTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATCTTCCTTCAGGTGCTTaGTGGCCAAGTGGCTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KKQTRLVISYHKQEYRKHLPSGA*WPSGWR Trigger: TCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAG...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS-3UTR CAA 90 bp | CACCAAAGAATGTTCATGGCAGTTAATTTTCAGGCTGTAAAAACTACATCTATGCAGCCACACAGAGAATaGCATCCACCTTCTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: HQRMFMAVNFQAVKTTSMQPHRE*HPPSGH Trigger: GTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTG...CATAGATGTAGTTTTTACAGCCTGAAAATTAACTGCCATGAACATTCTTTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACAAACAAGACTGGTTATCTCCTACCACAAACAGGAATACAGAAAACATAGTCTGCCTCAGGCATaGATTTCCTGTTCATCGGGG | + |
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Preference number: 5 (lower is better) Translates to: KKQTRLVISYHKQEYRKHSLPQA*ISCSSG Trigger: CCCCGATGAACAGGAAATCAATGCCTGAGGCAGACT...ATGTTTTCTGTATTCCTGTTTGTGGTAGGAGATAACCAGTCTTGTTTGTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS GCA 72 bp | GGAAGGCCTGTACGCAGCGCGAGCCCAGAGCGCCCCTaGCGCCGTACACCAGCACCCGGCGCGCCTCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GRPVRSASPERP*RRTPAPGAPRL Trigger: CAGGCGAGGCGCGCCGGGTGCTGGTGTACGGCGGCAGGGGCGCTCTGGGCTCGCGCTGCGTACAGGCCTTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015950.12 ENSMUST00000127562.3 ENSMUST00000154962.8 ENSMUST00000197946.5 |
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| CDS GCA 72 bp | CACAGCTGGCAGAACCTTCCCTGGGCCTCTCCCAGTTaGGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: HSWQNLPWASPS*GPGRPVRSASP Trigger: TGGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAACTGGGAGAGGCCCAGGGAAGGTTCTGCCAGCTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154962.8 |
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| CDS GCA 72 bp | CGTTCTCCACCACATCGATGCTGGCAACCCACCAGTTaGGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RSPPHRCWQPTS*GPGRPVRSASP Trigger: TGGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGAACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS CAA 72 bp | TCGTTCTCCACCACATCGATGCTGGCAACCCACCAGTaGCGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFSTTSMLATHQ*RARKACTQREP Trigger: GGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGAACGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS GCA 72 bp | CGCTGGCACTGGCCTCTTCGTTCTCCACCACATCGATaGTGGCAACCCACCAGTTGCGGGCCCGGAAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RWHWPLRSPPHR*WQPTSCGPGRP Trigger: AGGCCTTCCGGGCCCGCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGAACGAAGAGGCCAGTGCCAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS CAA 90 bp | TCCAGGTCCTTCAGACTGAAGACCCAGATGTCAGTGTCTACCCAGTaGCGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCCAGAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRSFRLKTQMSVSTQ*RARKACTQREPRAP Trigger: GGGCGCTCTGGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAACTGGGTAGACACTGACATCTGGGTCTTCAGTCTGAAGGACCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127562.3 |
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| CDS GCA 72 bp | GGCTCTGGCAGAGCTGATGGACGGCTCCCTTGGCCATaGCATAGCCGATCATCCCAGGAGTCCCATCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSGRADGRLPWP*HSRSSQESHPR Trigger: CCTTGGATGGGACTCCTGGGATGATCGGCTATGGCATGGCCAAGGGAGCCGTCCATCAGCTCTGCCAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS CCA 72 bp | TGGCACTGGCCTCTTCGTTCTCCACCACATCGATGCTaGCAACCCACCAGTTGCGGGCCCGGAAGGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: WHWPLRSPPHRC*QPTSCGPGRPV Trigger: TACAGGCCTTCCGGGCCCGCAACTGGTGGGTTGCCAGCATCGATGTGGTGGAGAACGAAGAGGCCAGTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015950.12 ENSMUST00000197946.5 |
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| CDS CAA 72 bp | TTCAGACTGAAGACCCAGATGTCAGTGTCTACCCAGTaGCGGGCCCGGAAGGCCTGTACGCAGCGCGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FRLKTQMSVSTQ*RARKACTQREP Trigger: GGGCTCGCGCTGCGTACAGGCCTTCCGGGCCCGCAACTGGGTAGACACTGACATCTGGGTCTTCAGTCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127562.3 |
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| CDS GCA 72 bp | GCCCCAGCCAGGGTCAAGAGGCCTCCTTCCTTCAGGTaGTTTGTGGCCAAGTGGCTGGAGATAGTGGATGTC | + |
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Preference number: 6 (lower is better) Translates to: APARVKRPPSFR*FVAKWLEIVDV Trigger: GACATCCACTATCTCCAGCCACTTGGCCACAAAGCACCTGAAGGAAGGAGGCCTCTTGACCCTGGCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000154962.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS GCA 72 bp | CGCTGGCACTGGCCTCTTCGTTCTCCACCACATCGATaGTGGCAACCCACTCAGAAACCTCCAGGTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RWHWPLRSPPHR*WQPTQKPPGPS Trigger: TGAAGGACCTGGAGGTTTCTGAGTGGGTTGCCAGCATCGATGTGGTGGAGAACGAAGAGGCCAGTGCCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127562.3 |
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| CDS CCA 72 bp | TGGCACTGGCCTCTTCGTTCTCCACCACATCGATGCTaGCAACCCACTCAGAAACCTCCAGGTCCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: WHWPLRSPPHRC*QPTQKPPGPSD Trigger: GTCTGAAGGACCTGGAGGTTTCTGAGTGGGTTGCCAGCATCGATGTGGTGGAGAACGAAGAGGCCAGTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127562.3 |
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| CDS CCA 72 bp | CAGAGGACTTTAGAATTGGCAGACAGAGAACACAGCTaGCAGAACCTTCCCTGGGCCTCTCCCAGTTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QRTLELADREHS*QNLPWASPSCG Trigger: CCCGCAACTGGGAGAGGCCCAGGGAAGGTTCTGCCAGCTGTGTTCTCTGTCTGCCAATTCTAAAGTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154962.8 |
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| CDS TCA 72 bp | TGGCAACCCACTCAGAAACCTCCAGGTCCTTCAGACTaGAGACCCAGATGTCAGTGTCTACCCAGTTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: WQPTQKPPGPSD*RPRCQCLPSCG Trigger: CCCGCAACTGGGTAGACACTGACATCTGGGTCTTCAGTCTGAAGGACCTGGAGGTTTCTGAGTGGGTTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127562.3 |
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| CDS TCA 72 bp | GGATTAGGCTTCCTGAGTTTGGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTGGGAGCACAGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: GLGFLSLAVCSQ*SSHGRLGAQQW Trigger: CCATTGCTGTGCTCCCAACCTTCCATGACTGGATCACTGGGAACAAACGGCCAAACTCAGGAAGCCTAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197946.5 |
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| CDS CCA 72 bp | CATCCTCCAGCCACACAGAGAATTGCATCCACCTTCTaGTCACCTAGGAGCTTTCCAACATCAGCAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: HPPATQRIASTF*SPRSFPTSAVT Trigger: GGTCACTGCTGATGTTGGAAAGCTCCTAGGTGACCAGAAGGTGGATGCAATTCTCTGTGTGGCTGGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000127562.3 ENSMUST00000154962.8 ENSMUST00000197946.5 |
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| CDS CCA 72 bp | CCTGAGTTTGGCCGTTTGTTCCCAGTGATCCAGTCATaGAAGGTTTCCACCAGGAACTCTAAGGGTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PEFGRLFPVIQS*KVSTRNSKGVQ Trigger: CTGGACACCCTTAGAGTTCCTGGTGGAAACCTTCCATGACTGGATCACTGGGAACAAACGGCCAAACTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS CCA 72 bp | GGAGTAAGCTCTGTCTTCCCATCTGTGGTTACCACCTaGATTAGGCTTCCTGAGTTTGGCCGTTTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GVSSVFPSVVTT*IRLPEFGRLFP Trigger: TGGGAACAAACGGCCAAACTCAGGAAGCCTAATCCAGGTGGTAACCACAGATGGGAAGACAGAGCTTACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000197946.5 ENSMUST00000198258.5 |
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| CDS TCA 72 bp | GGATTAGGCTTCCTGAGTTTGGCCGTTTGTTCCCAGTaGTCCAGTCATGGAAGGTTTCCACCAGGAACTCTA | + |
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Preference number: 6 (lower is better) Translates to: GLGFLSLAVCSQ*SSHGRFPPGTL Trigger: TAGAGTTCCTGGTGGAAACCTTCCATGACTGGATCACTGGGAACAAACGGCCAAACTCAGGAAGCCTAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000198258.5 |
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| CDS GCA 72 bp | GCCAAGTGGCTGGAGATAGTGGATGTCCACATACTCTaGTTCCACATCATGTCACAGTTTTTAAAAAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: AKWLEIVDVHIL*FHIMSQFLKSD Trigger: GTCGCTTTTTAAAAACTGTGACATGATGTGGAAGCAGAGTATGTGGACATCCACTATCTCCAGCCACTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000015950.12 ENSMUST00000117425.8 ENSMUST00000118097.8 ENSMUST00000120867.8 ENSMUST00000127562.3 ENSMUST00000154962.8 ENSMUST00000197946.5 |
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