Pregenerated sensors for PYM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064030Ensembl transcript IDs: ENSMUST00000065210.10, ENSMUST00000163377.10, ENSMUST00000218218.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CTGTCTTGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGATGGGGTaGCCGGTGTGGTGGCCTCAGGGCTCAGCCCTGGGGGAAGTTCTG | + |
Preference number: 1 (lower is better) Translates to: LSWRGLSHHLQVWMG*PVWWPQGSALGEVL Trigger: CAGAACTTCCCCCAGGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 90 bp | TTTGGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGATaGGGTGACCGGTGTGGTGGCCTCAGGGCTCAGCCCTGGGGGAAG | + |
Preference number: 1 (lower is better) Translates to: FGCLGEACLTTFRSG*GDRCGGLRAQPWGK Trigger: CTTCCCCCAGGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR GCA 90 bp | AGCTGTTCTCTGCTGGGCTGGCTGACCTCCCCGGCCTGGATGCGTTaGTGCAGCTCCTCCACCTGCCGAAGCTTCTTCCTCAGGTTCTTG | + |
Preference number: 1 (lower is better) Translates to: SCSLLGWLTSPAWMR*CSSSTCRSFFLRFL Trigger: CAAGAACCTGAGGAAGAAGCTTCGGCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR GCA 90 bp | TGTTCTCTGCTGGGCTGGCTGACCTCCCCGGCCTGGATGCGTTGCTaGAGCTCCTCCACCTGCCGAAGCTTCTTCCTCAGGTTCTTGATC | + |
Preference number: 1 (lower is better) Translates to: CSLLGWLTSPAWMRC*SSSTCRSFFLRFLI Trigger: GATCAAGAACCTGAGGAAGAAGCTTCGGCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR TCA 90 bp | CCCAGAGCACCCCATGGTTTGTTCTGCAGTCCACTCCCCTACTCCTaGAGCCTCACAGGCCCAACTCCAAGTCCTCCAGCTCCTCCTCCA | + |
Preference number: 1 (lower is better) Translates to: PRAPHGLFCSPLPYS*SLTGPTPSPPAPPP Trigger: TGGAGGAGGAGCTGGAGGACTTGGAGTTGGGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 90 bp | GCAGCTAGAGGCGTGGCCTGGGGGCCTTGGAGAGCACTAGGTATCTaGGCTGTGTCTCCCAGAGACACCTTATCAAGAGTCCTGCTCAAG | + |
Preference number: 1 (lower is better) Translates to: AARGVAWGPWRALGI*AVSPRDTLSRVLLK Trigger: CTTGAGCAGGACTCTTGATAAGGTGTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACGCCTCTAGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 90 bp | TCTCCTGTTGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTTaGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGATG | + |
Preference number: 1 (lower is better) Translates to: SPVAAASSPSASGFV*LSWRGLSHHLQVWM Trigger: CATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR TCA 90 bp | CACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTaGACACTGGGATGGAAGGGGAAAGTCCAAAAACAGGAGCTGAGA | + |
Preference number: 1 (lower is better) Translates to: HPDQQQRYLRSALRL*TLGWKGKVQKQELR Trigger: TCTCAGCTCCTGTTTTTGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | GCAGCAGAGTCGGATGGATCAGAGGCAGCTAGAGGCGTGGCCTGGGGGCCTTGGACCTTCAGGTCTGGATaGGGTGACCGGTGTGGTGGC | + |
Preference number: 2 (lower is better) Translates to: AAESDGSEAARGVAWGPWTFRSG*GDRCGG Trigger: GCCACCACACCGGTCACCCCATCCAGACCTGAAGGT...CCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | GCAGCAGAGTCGGATGGATCAGAGGCAGCTAGAGGCGTGGCCTGGGGGCCTTGGCCCCAGAGCACCCCATaGTTTGTTCTGCAGTCCACT | + |
Preference number: 2 (lower is better) Translates to: AAESDGSEAARGVAWGPWPQSTP*FVLQST Trigger: AGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGG...CCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR TCA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCTGGGGGTACCCCTCCTaGCTGCTGCGGCCCACACTC | + |
Preference number: 2 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSWGYPS*LLRPTL Trigger: GAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCA...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR GCA 90 bp | CCTCCAGAACCCTCCGTCGAGCCAGCTTCTCCAGCTGTTCTCTGCTGGGCTGGCTCTTTCTCCTGTTGCTaGCGCCTCTTCTCCTTCCGC | + |
Preference number: 2 (lower is better) Translates to: PPEPSVEPASPAVLCWAGSFSCC*RLFSFR Trigger: GCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGA...GCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACGGAGGGTTCTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR GCA 90 bp | GCAGCAGAGTCGGATGGATCAGAGGCAGCTAGAGGCGTGGCCTGGGGGCCTTGGCCTGCTCAAGGCCTCTaGTTCTTTCTCCTGTTGCTG | + |
Preference number: 2 (lower is better) Translates to: AAESDGSEAARGVAWGPWPAQGL*FFLLLL Trigger: CAGCAACAGGAGAAAGAAGCAGAGGCCTTGAGCAGG...CCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR TCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTTGGGGGTACCCCTCCTaGCTGCTGCGGCCCACACTC | + |
Preference number: 2 (lower is better) Translates to: EVPQVGTQIVNTGMEGESWGYPS*LLRPTL Trigger: GAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCA...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGGCGGCCCACACTCCCTaGACCCCAGAGCACCCCATG | + |
Preference number: 2 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKAAHTP*TPEHPM Trigger: CATGGGGTGCTCTGGGGTCCAGGGAGTGTGGGCCGC...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCAGCGGCCCACACTCCCTaGACCCCAGAGCACCCCATG | + |
Preference number: 2 (lower is better) Translates to: VPQVGTQIVNTGMEGESPAAHTP*TPEHPM Trigger: CATGGGGTGCTCTGGGGTCCAGGGAGTGTGGGCCGC...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR TCA 90 bp | GTCTCCCAGAGACACCTTATCAAGAGTCCTGCTCAAGGCCTCTGCTTCTTTCTCTGGGGGTACCCCTCCTaGCTGCTGCGGCCCACACTC | + |
Preference number: 2 (lower is better) Translates to: VSQRHLIKSPAQGLCFFLWGYPS*LLRPTL Trigger: GAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCA...GAGAAAGAAGCAGAGGCCTTGAGCAGGACTCTTGATAAGGTGTCTCTGGGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR TCA 90 bp | CCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGCACAGGAGGTGGAGGTaGGTCAGTATGGGGGTACCC | + |
Preference number: 2 (lower is better) Translates to: PRSAAEVPQVGTQIVNTGHRRWR*VSMGVP Trigger: GGGTACCCCCATACTGACTCACCTCCACCTCCTGTG...CCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR GCA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACCCCTCCTGACTGCTaGGGCCCACACTCCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNTPPDC*GPHSLD Trigger: GTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGT...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR TCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCACACAGGAGGTGGAGGTaGGTCAGTATGGGGGTACCC | + |
Preference number: 2 (lower is better) Translates to: VPQVGTQIVNTGMEGESPHRRWR*VSMGVP Trigger: GGGTACCCCCATACTGACTCACCTCCACCTCCTGTG...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | TGGTTTGTTCTGCAGTCCACTCCCCTACTCCTGAAGCCTCACAGGCCCAACTCCCTCAGGGCTCAGCCCTaGGGGAAGTTCTGGTTTACT | + |
Preference number: 2 (lower is better) Translates to: WFVLQSTPLLLKPHRPNSLRAQP*GKFWFT Trigger: AGTAAACCAGAACTTCCCCCAGGGCTGAGCCCTGAG...GGAGTTGGGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CAA 90 bp | TTCTCCTGTTGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTaGGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGAT | + |
Preference number: 2 (lower is better) Translates to: FSCCCRLFSFRFRFR*AVLERPVSPPSGLD Trigger: ATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR GCA 90 bp | CACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTCAGCCACCCCTCCTGACTGCTaGGGCCCACACTCCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: HCEQELRLQNMGTAIPSATPPDC*GPHSLD Trigger: GTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGT...GGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCCCAGAGCACCCCATaGTTTGTTCTGCAGTCCACT | + |
Preference number: 2 (lower is better) Translates to: EVPQVGTQIVNTGMEGESPQSTP*FVLQST Trigger: AGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGG...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACCCCCAGAGCACCCCATaGTTTGTTCTGCAGTCCACT | + |
Preference number: 2 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNPQSTP*FVLQST Trigger: AGTGGACTGCAGAACAAACCATGGGGTGCTCTGGGG...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | CACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTCAGCCGTGGCCTGGGGGCCTTaGAGAGCACTAGGTATCTGG | + |
Preference number: 2 (lower is better) Translates to: HCEQELRLQNMGTAIPSAVAWGP*RALGIW Trigger: CCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCAC...GGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR GCA 90 bp | GTCAGGGAAGTAATTCATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGACCCCTCCTGACTGCTaGGGCCCACACTCCCTGGAC | + |
Preference number: 2 (lower is better) Translates to: VREVIHKHCEQELRLQNMTPPDC*GPHSLD Trigger: GTCCAGGGAGTGTGGGCCGCAGCAGTCAGGAGGGGT...CATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | TTCTTTCTCCTGTTGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTTGGCCCCTGGGGGAAGTTCTaGTTTACTCTTGAAAAACTT | + |
Preference number: 2 (lower is better) Translates to: FFLLLLPPLLLPLQVSFGPWGKF*FTLEKL Trigger: AAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGG...GCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CCA 90 bp | GTCAGGGAAGTAATTCATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGTTCGTTTGGCTGTCTTaGAGAGGCCTGTCTCACCAC | + |
Preference number: 2 (lower is better) Translates to: VREVIHKHCEQELRLQNMFVWLS*RGLSHH Trigger: GTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAA...CATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 72 bp | CGTCGAGCCAGCTTCTCCAGCTGTTCTCTGCTGGGCTaGCTGACCTCCCCGGCCTGGATGCGTTGCTGCAGC | + |
Preference number: 3 (lower is better) Translates to: RRASFSSCSLLG*LTSPAWMRCCS Trigger: GCTGCAGCAACGCATCCAGGCCGGGGAGGTCAGCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 72 bp | CTTGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGATaGGGTGACCGGTGTGGTGGCCTCAGGGCTCAGCCC | + |
Preference number: 3 (lower is better) Translates to: LGEACLTTFRSG*GDRCGGLRAQP Trigger: GGGCTGAGCCCTGAGGCCACCACACCGGTCACCCCATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | CCTCCAGAACCCTCCGTCGAGCCAGCTTCTCCAGCTGTTCTCTGCTGGGCTGGCCGTGGCCTGGGGGCCTaGGAGAGCACTAGGTATCTG | + |
Preference number: 3 (lower is better) Translates to: PPEPSVEPASPAVLCWAGRGLGA*ESTRYL Trigger: CAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACG...GCCAGCCCAGCAGAGAACAGCTGGAGAAGCTGGCTCGACGGAGGGTTCTGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | CACCCCATGGTTTGTTCTGCAGTCCACTCCCCTACTCCTGAAGCCTCACAGGCCCCCGGCCTGGATGCGTaGCTGCAGCTCCTCCACCTG | + |
Preference number: 3 (lower is better) Translates to: HPMVCSAVHSPTPEASQAPGLDA*LQLLHL Trigger: CAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGG...GGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | CACCCCATGGTTTGTTCTGCAGTCCACTCCCCTACTCCTGAAGCCTCACAGGCCCGCTTCAGGTTTCGTTaGGCTGTCTTGGAGAGGCCT | + |
Preference number: 3 (lower is better) Translates to: HPMVCSAVHSPTPEASQARFRFR*AVLERP Trigger: AGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCG...GGCCTGTGAGGCTTCAGGAGTAGGGGAGTGGACTGCAGAACAAACCATGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 72 bp | GCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTTaGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCAG | + |
Preference number: 3 (lower is better) Translates to: AAASSPSASGFV*LSWRGLSHHLQ Trigger: CTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTAGAGCACCCCATGGTTaGTTCTGCAGTCCACTCCCC | + |
Preference number: 3 (lower is better) Translates to: EVPQVGTQIVNTGMEGESRAPHG*FCSPLP Trigger: GGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCT...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCAAGAGCACCCCATGGTTaGTTCTGCAGTCCACTCCCC | + |
Preference number: 3 (lower is better) Translates to: VPQVGTQIVNTGMEGESPRAPHG*FCSPLP Trigger: GGGGAGTGGACTGCAGAACAAACCATGGGGTGCTCT...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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3UTR GCA 72 bp | GTCCTGCTCAAGGCCTCTGCTTCTTTCTCCTGTTGCTaGCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTTG | + |
Preference number: 3 (lower is better) Translates to: VLLKASASFSCC*RLFSFRFRFRL Trigger: CAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCAGAGGCCTTGAGCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CCA 72 bp | TCTTCTCCTTCCGCTTCAGGTTTCGTTTGGCTGTCTTaGAGAGGCCTGTCTCACCACCTTCAGGTCTGGATG | + |
Preference number: 3 (lower is better) Translates to: SSPSASGFVWLS*RGLSHHLQVWM Trigger: CATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR-3UTR CAA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACTGCTTCTTTCTCCTGTaGCTGCCGCCTCTTCTCCTT | + |
Preference number: 3 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNCFFLL*LPPLLL Trigger: AAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCA...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR GCA 90 bp | GTGGAGGTGAGTCAGTATGGGGGTACCCCTCCTGACTGCTGCGGCCCACACTCCCCGGCCTGGATGCGTTaGTGCAGCTCCTCCACCTGC | + |
Preference number: 4 (lower is better) Translates to: VEVSQYGGTPPDCCGPHSPAWMR*CSSSTC Trigger: GCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGG...GGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR TCA 90 bp | GCAGCAGAGTCGGATGGATCAGAGGCAGCTAGAGGCGTGGCCTGGGGGCCTTGGGCACGTATCCTTCTTTaGCCCTCCGCTGCTTTCGCC | + |
Preference number: 4 (lower is better) Translates to: AAESDGSEAARGVAWGPWARILL*PSAAFA Trigger: GGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGC...CCAAGGCCCCCAGGCCACGCCTCTAGCTGCCTCTGATCCATCCGACTCTGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR CCA 90 bp | GTGGAGGTGAGTCAGTATGGGGGTACCCCTCCTGACTGCTGCGGCCCACACTCCGTGGCCTGGGGGCCTTaGAGAGCACTAGGTATCTGG | + |
Preference number: 4 (lower is better) Translates to: VEVSQYGGTPPDCCGPHSVAWGP*RALGIW Trigger: CCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCAC...GGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GTGGAGGTGAGTCAGTATGGGGGTACCCCTCCTGACTGCTGCGGCCCACACTCCGCTTCAGGTTTCGTTTaGCTGTCTTGGAGAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: VEVSQYGGTPPDCCGPHSASGFV*LSWRGL Trigger: CAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGC...GGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GTGGAGGTGAGTCAGTATGGGGGTACCCCTCCTGACTGCTGCGGCCCACACTCCAGAGCACTAGGTATCTaGGCTGTGTCTCCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: VEVSQYGGTPPDCCGPHSRALGI*AVSPRD Trigger: GTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCT...GGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GTGGAGGTGAGTCAGTATGGGGGTACCCCTCCTGACTGCTGCGGCCCACACTCCTCTTGGCTTTCTCTGTaGTGGCAGCAGAGTCGGATG | + |
Preference number: 4 (lower is better) Translates to: VEVSQYGGTPPDCCGPHSSWLSL*WQQSRM Trigger: CATCCGACTCTGCTGCCACCACAGAGAAAGCCAAGA...GGAGTGTGGGCCGCAGCAGTCAGGAGGGGTACCCCCATACTGACTCACCTCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR GCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCGGCCTGGATGCGTTaGTGCAGCTCCTCCACCTGC | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESPAWMR*CSSSTC Trigger: GCAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGG...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | CCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGACCTTCAGGTCTGGATaGGGTGACCGGTGTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: PRSAAEVPQVGTQIVNTGTFRSG*GDRCGG Trigger: GCCACCACACCGGTCACCCCATCCAGACCTGAAGGT...CCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCTGACCTCCCCGGCCTaGATGCGTTGCTGCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESLTSPA*MRCCSS Trigger: GGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAG...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACCTTCAGGTCTGGATaGGGTGACCGGTGTGGTGGC | + |
Preference number: 4 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNTFRSG*GDRCGG Trigger: GCCACCACACCGGTCACCCCATCCAGACCTGAAGGT...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGGTGGCCTGGGGGCCTTaGAGAGCACTAGGTATCTGG | + |
Preference number: 4 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKVAWGP*RALGIW Trigger: CCAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCAC...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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3UTR CAA 72 bp | TGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTaGGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCA | + |
Preference number: 4 (lower is better) Translates to: CCRLFSFRFRFR*AVLERPVSPPS Trigger: TGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR TCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTGCACGTATCCTTCTTTaGCCCTCCGCTGCTTTCGCC | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESARILL*PSAAFA Trigger: GGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGC...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR GCA 90 bp | CCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGCCTGCTCAAGGCCTCTaGTTCTTTCTCCTGTTGCTG | + |
Preference number: 4 (lower is better) Translates to: PRSAAEVPQVGTQIVNTGPAQGL*FFLLLL Trigger: CAGCAACAGGAGAAAGAAGCAGAGGCCTTGAGCAGG...CCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GGCCTCTGCTTCTTTCTCCTGTTGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTACTGGGACCTCCTCTTaGGGCACGTATCCTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: GLCFFLLLLPPLLLPLQVTGTSS*GTYPSL Trigger: CAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGT...AACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCAGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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3UTR CAA 72 bp | AAGAGTCCTGCTCAAGGCCTCTGCTTCTTTCTCCTGTaGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCG | + |
Preference number: 4 (lower is better) Translates to: KSPAQGLCFFLL*LPPLLLPLQVS Trigger: CGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCAGAGGCCTTGAGCAGGACTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR GCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCATCTTTCTCCTGTTGCTaGCGCCTCTTCTCCTTCCGC | + |
Preference number: 4 (lower is better) Translates to: VPQVGTQIVNTGMEGESPSFSCC*RLFSFR Trigger: GCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGA...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR GCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTTCTTTCTCCTGTTGCTaGCGCCTCTTCTCCTTCCGC | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESSFSCC*RLFSFR Trigger: GCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGA...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCACTCAGGGCTCAGCCCTaGGGGAAGTTCTGGTTTACT | + |
Preference number: 4 (lower is better) Translates to: VPQVGTQIVNTGMEGESPLRAQP*GKFWFT Trigger: AGTAAACCAGAACTTCCCCCAGGGCTGAGCCCTGAG...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCAGAGCACTAGGTATCTaGGCTGTGTCTCCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSRALGI*AVSPRD Trigger: GTCTCTGGGAGACACAGCCCAGATACCTAGTGCTCT...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCTCTTGGCTTTCTCTGTaGTGGCAGCAGAGTCGGATG | + |
Preference number: 4 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSSWLSL*WQQSRM Trigger: CATCCGACTCTGCTGCCACCACAGAGAAAGCCAAGA...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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3UTR CAA 72 bp | CTCTTCTCCTTCCGCTTCAGGTTTCGTTTGGCTGTCTaGGAGAGGCCTGTCTCACCACCTTCAGGTCTGGAT | + |
Preference number: 4 (lower is better) Translates to: LFSFRFRFRLAV*ERPVSPPSGLD Trigger: ATCCAGACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCGGAAGGAGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR GCA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACCCTGCTCAAGGCCTCTaGTTCTTTCTCCTGTTGCTG | + |
Preference number: 4 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNPAQGL*FFLLLL Trigger: CAGCAACAGGAGAAAGAAGCAGAGGCCTTGAGCAGG...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGACTGGGACCTCCTCTTaGGGCACGTATCCTTCTTTG | + |
Preference number: 4 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKTGTSS*GTYPSL Trigger: CAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGT...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTTTCGTTTGGCTGTCTTaGAGAGGCCTGTCTCACCAC | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESFVWLS*RGLSHH Trigger: GTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAA...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGGCTTCAGGTTTCGTTTaGCTGTCTTGGAGAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKASGFV*LSWRGL Trigger: CAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGC...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCATGGCTTTCTCTGTGGTaGCAGCAGAGTCGGATGGAT | + |
Preference number: 4 (lower is better) Translates to: VPQVGTQIVNTGMEGESPWLSLW*QQSRMD Trigger: ATCCATCCGACTCTGCTGCCACCACAGAGAAAGCCA...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR TCA 90 bp | CACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTCAGCCGCACGTATCCTTCTTTaGCCCTCCGCTGCTTTCGCC | + |
Preference number: 4 (lower is better) Translates to: HCEQELRLQNMGTAIPSAARILL*PSAAFA Trigger: GGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGC...GGCTGAGGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CCA 90 bp | CATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCCTGACCTCCCCGGCCTaGATGCGTTGCTGCAGCTCC | + |
Preference number: 4 (lower is better) Translates to: HKHCEQELRLQNMGTAIPLTSPA*MRCCSS Trigger: GGAGCTGCAGCAACGCATCCAGGCCGGGGAGGTCAG...GGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR GCA 90 bp | GTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCACCTTATCAAGAGTCCTaGTCAAGGCCTCTGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: VPQVGTQIVNTGMEGESPPYQES*SRPLLL Trigger: AAGAAGCAGAGGCCTTGAGCAGGACTCTTGATAAGG...TGGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR TCA 90 bp | TTCTTTCTCCTGTTGCTGCCGCCTCTTCTCCTTCCGCTTCAGGTTTCGTTTGGCGGCAATGTACTTGCCTaGAAGGAAATGTGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: FFLLLLPPLLLPLQVSFGGNVLA*KEMCHR Trigger: TCTGTGACACATTTCCTTTCAGGCAAGTACATTGCC...GCCAAACGAAACCTGAAGCGGAAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR TCA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCGAAATGTGTCACAGATaGAGTCCAGGTTGTAGTAAT | + |
Preference number: 4 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSEMCHR*SPGCSN Trigger: ATTACTACAACCTGGACTTCATCTGTGACACATTTC...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR CCA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCCTGGGGGAAGTTCTaGTTTACTCTTGAAAAACTT | + |
Preference number: 4 (lower is better) Translates to: EVPQVGTQIVNTGMEGESPWGKF*FTLEKL Trigger: AAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGG...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGCCCTGGGGGAAGTTCTaGTTTACTCTTGAAAAACTT | + |
Preference number: 4 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKPWGKF*FTLEKL Trigger: AAGTTTTTCAAGAGTAAACCAGAACTTCCCCCAGGG...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | CATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTTCGTTTGGCTGTCTTaGAGAGGCCTGTCTCACCAC | + |
Preference number: 4 (lower is better) Translates to: HKHCEQELRLQNMGTAIPFVWLS*RGLSHH Trigger: GTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAA...GGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CCA 90 bp | CATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTGGCTTTCTCTGTGGTaGCAGCAGAGTCGGATGGAT | + |
Preference number: 4 (lower is better) Translates to: HKHCEQELRLQNMGTAIPWLSLW*QQSRMD Trigger: ATCCATCCGACTCTGCTGCCACCACAGAGAAAGCCA...GGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS TCA 90 bp | TTTGACCCTCCGCTGCTTTCGCCACGTCCCGTCGGGTCTCTGTGTTaGGGCAATGTACTTGCCTGTCCCCGTGGCCTCGGGGGTGCTGGC | + |
Preference number: 5 (lower is better) Translates to: FDPPLLSPRPVGSLC*GNVLACPRGLGGAG Trigger: GCCAGCACCCCCGAGGCCACGGGGACAGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | CCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGCCCGGCCTGGATGCGTaGCTGCAGCTCCTCCACCTG | + |
Preference number: 5 (lower is better) Translates to: PRSAAEVPQVGTQIVNTGPGLDA*LQLLHL Trigger: CAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGG...CCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS GCA 90 bp | ACTGGGACCTCCTCTTGGGGCACGTATCCTTCTTTGACCCTCCGCTaGTTTCGCCACGTCCCGTCGGGTCTCTGTGTTGAGGCAATGTAC | + |
Preference number: 5 (lower is better) Translates to: TGTSSWGTYPSLTLR*FRHVPSGLCVEAMY Trigger: GTACATTGCCTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS TCA 90 bp | TGTTTTCATAGACTGGGACCTCCTCTTGGGGCACGTATCCTTCTTTaGCCCTCCGCTGCTTTCGCCACGTCCCGTCGGGTCTCTGTGTTG | + |
Preference number: 5 (lower is better) Translates to: CFHRLGPPLGARILL*PSAAFATSRRVSVL Trigger: CAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCTATGAAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | CGCTTCAGGTTTCGTTTGGCTGTCTTGGAGAGGCCTGTCTCACCACCTTCAGGTGGCACGTATCCTTCTTaGACCCTCCGCTGCTTTCGC | + |
Preference number: 5 (lower is better) Translates to: RFRFRLAVLERPVSPPSGGTYPS*TLRCFR Trigger: GCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCC...ACCTGAAGGTGGTGAGACAGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS-3UTR CAA 90 bp | AAGACACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACGGCACGTATCCTTCTTaGACCCTCCGCTGCTTTCGC | + |
Preference number: 5 (lower is better) Translates to: KTPRSAAEVPQVGTQIVNGTYPS*TLRCFR Trigger: GCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCC...GTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CAA 90 bp | AGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGGGCACGTATCCTTCTTaGACCCTCCGCTGCTTTCGC | + |
Preference number: 5 (lower is better) Translates to: RGTSGRHSDCEHWDGRGKGTYPS*TLRCFR Trigger: GCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCC...CTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CAA 90 bp | ACCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGACTGGGACCTCCTCTaGGGGCACGTATCCTTCTTT | + |
Preference number: 5 (lower is better) Translates to: TQISSRGTSGRHSDCEHWDWDLL*GHVSFF Trigger: AAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTC...CCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CAA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCCGCTTCAGGTTTCGTTaGGCTGTCTTGGAGAGGCCT | + |
Preference number: 5 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSRFRFR*AVLERP Trigger: AGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCG...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | CCCAGATCAGCAGCAGAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGTGCTTCTTTCTCCTGTaGCTGCCGCCTCTTCTCCTT | + |
Preference number: 5 (lower is better) Translates to: PRSAAEVPQVGTQIVNTGCFFLL*LPPLLL Trigger: AAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCA...CCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTCTGCTGCTGATCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTGACTGGGACCTCCTCTaGGGGCACGTATCCTTCTTT | + |
Preference number: 5 (lower is better) Translates to: EVPQVGTQIVNTGMEGESDWDLL*GHVSFF Trigger: AAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTC...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS-3UTR CAA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCGCTTCAGGTTTCGTTaGGCTGTCTTGGAGAGGCCT | + |
Preference number: 5 (lower is better) Translates to: EVPQVGTQIVNTGMEGESRFRFR*AVLERP Trigger: AGGCCTCTCCAAGACAGCCAAACGAAACCTGAAGCG...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | GGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTCCAGGTTCTTGATCTTCTaGGCTTTCTCTGTGGTGGCA | + |
Preference number: 5 (lower is better) Translates to: GTSGRHSDCEHWDGRGKSRFLIF*AFSVVA Trigger: TGCCACCACAGAGAAAGCCAAGAAGATCAAGAACCT...GGACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | CATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCCGTGGCCTGGGGGCCTaGGAGAGCACTAGGTATCTG | + |
Preference number: 5 (lower is better) Translates to: HKHCEQELRLQNMGTAIPRGLGA*ESTRYL Trigger: CAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACG...GGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | GAGGTACCTCAGGTCGGCACTCAGATTGTGAACACTGGGATGGAAGGGGAAAGTAGGTTCTTGATCTTCTaGGCTTTCTCTGTGGTGGCA | + |
Preference number: 5 (lower is better) Translates to: EVPQVGTQIVNTGMEGESRFLIF*AFSVVA Trigger: TGCCACCACAGAGAAAGCCAAGAAGATCAAGAACCT...ACTTTCCCCTTCCATCCCAGTGTTCACAATCTGAGTGCCGACCTGAGGTACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | GTCAGGGAAGTAATTCATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGCCCGGCCTGGATGCGTaGCTGCAGCTCCTCCACCTG | + |
Preference number: 5 (lower is better) Translates to: VREVIHKHCEQELRLQNMPGLDA*LQLLHL Trigger: CAGGTGGAGGAGCTGCAGCAACGCATCCAGGCCGGG...CATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | GTCAGGGAAGTAATTCATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGCGTGGCCTGGGGGCCTaGGAGAGCACTAGGTATCTG | + |
Preference number: 5 (lower is better) Translates to: VREVIHKHCEQELRLQNMRGLGA*ESTRYL Trigger: CAGATACCTAGTGCTCTCCAAGGCCCCCAGGCCACG...CATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATGAATTACTTCCCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS-3UTR CAA 90 bp | CATAAACACTGTGAACAGGAACTAAGACTCCAAAACATGGGTACTGCTATACCCTGCTTCTTTCTCCTGTaGCTGCCGCCTCTTCTCCTT | + |
Preference number: 5 (lower is better) Translates to: HKHCEQELRLQNMGTAIPCFFLL*LPPLLL Trigger: AAGGAGAAGAGGCGGCAGCAACAGGAGAAAGAAGCA...GGGTATAGCAGTACCCATGTTTTGGAGTCTTAGTTCCTGTTCACAGTGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |
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CDS TCA 72 bp | AGACTGGGACCTCCTCTTGGGGCACGTATCCTTCTTTaGCCCTCCGCTGCTTTCGCCACGTCCCGTCGGGTC | + |
Preference number: 6 (lower is better) Translates to: RLGPPLGARILL*PSAAFATSRRV Trigger: GACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS GCA 72 bp | TCCTCTTGGGGCACGTATCCTTCTTTGACCCTCCGCTaGTTTCGCCACGTCCCGTCGGGTCTCTGTGTTGAG | + |
Preference number: 6 (lower is better) Translates to: SSWGTYPSLTLR*FRHVPSGLCVE Trigger: CTCAACACAGAGACCCGACGGGACGTGGCGAAAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 ENSMUST00000218218.2 |
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CDS GCA 72 bp | ACGTCCCGTCGGGTCTCTGTGTTGAGGCAATGTACTTaGCGCCGGTCTCGTCAGTTACATAGGGAGTCGCCA | + |
Preference number: 6 (lower is better) Translates to: TSRRVSVLRQCT*RRSRQLHRESP Trigger: TGGCGACTCCCTATGTAACTGACGAGACCGGCGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065210.10 |
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CDS GCA 72 bp | ACGTCCCGTCGGGTCTCTGTGTTGAGGCAATGTACTTaGCTGAAAGGAAATGTGTCACAGATGAAGTCCAGG | + |
Preference number: 6 (lower is better) Translates to: TSRRVSVLRQCT*LKGNVSQMKSR Trigger: CCTGGACTTCATCTGTGACACATTTCCTTTCAGGCAAGTACATTGCCTCAACACAGAGACCCGACGGGACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218218.2 |
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CDS CAA 72 bp | CTTCACATACTTGTTTTCATAGACTGGGACCTCCTCTaGGGGCACGTATCCTTCTTTGACCCTCCGCTGCTT | + |
Preference number: 6 (lower is better) Translates to: LHILVFIDWDLL*GHVSFFDPPLL Trigger: AAGCAGCGGAGGGTCAAAGAAGGATACGTGCCCCAAGAGGAGGTCCCAGTCTATGAAAACAAGTATGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065210.10 ENSMUST00000163377.10 |