Pregenerated sensors for PYGO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047824Ensembl transcript IDs: ENSMUST00000060061.11, ENSMUST00000107413.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCTGAGACGGGACATCCCAGAGGGCAGCCTTCGCGGTCAAGCTaGGCACCTCCGACTCTCAGGAGGGCCACACCCAAGCCTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RAETGHPRGQPSRSS*APPTLRRATPKPAF Trigger: GAAGGCAGGCTTGGGTGTGGCCCTCCTGAGAGTCGGAGGTGCCCAGCTTGACCGCGAAGGCTGCCCTCTGGGATGTCCCGTCTCAGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 90 bp | CCAACTCTTGAGTCTTCTCTCTCCCCATGCAGGGAGCGTGAGGGCTaGGACGGGACATCCCAGAGGGCAGCCTTCGCGGTCAAGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: PTLESSLSPCREREG*DGTSQRAAFAVKLG Trigger: GCCCAGCTTGACCGCGAAGGCTGCCCTCTGGGATGTCCCGTCTCAGCCCTCACGCTCCCTGCATGGGGAGAGAGAAGACTCAAGAGTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR GCA 90 bp | GTCAAGCTGGGCACCTCCGACTCTCAGGAGGGCCACACCCAAGCCTaGCTTCCCCACCCATTTGAGGAATGGACTTTTGGGTTAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: VKLGTSDSQEGHTQA*LPHPFEEWTFGLAG Trigger: TCCAGCTAACCCAAAAGTCCATTCCTCAAATGGGTGGGGAAGGCAGGCTTGGGTGTGGCCCTCCTGAGAGTCGGAGGTGCCCAGCTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 90 bp | CTGAACCCAAGGAAAGGGGCTCTACCTCAGGGAGCCAAGGAACCTTaGACATTCGACTCCAAGAGCTACAGCAGCAGCCATGGGGCTATA | + |
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Preference number: 1 (lower is better) Translates to: LNPRKGALPQGAKEP*TFDSKSYSSSHGAI Trigger: TATAGCCCCATGGCTGCTGCTGTAGCTCTTGGAGTCGAATGTTCAAGGTTCCTTGGCTCCCTGAGGTAGAGCCCCTTTCCTTGGGTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR GCA 90 bp | ATGGGATGCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTaGAGGAGCACGGTGGAAAAGGTGCACTTTCCCAGGCCATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: MGCQWWKTRKEREPL*RSTVEKVHFPRPWY Trigger: GTACCATGGCCTGGGAAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGCATCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 90 bp | AGCCATGGCAGGGCCTCCCTTGGATCCTTTCATCAGGGGAAGGAGTaGGGTATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACA | + |
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Preference number: 1 (lower is better) Translates to: SHGRASLGSFHQGKE*GIRASCLPKCFLET Trigger: TGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTATACCTCACTCCTTCCCCTGATGAAAGGATCCAAGGGAGGCCCTGCCATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 90 bp | CCATTTGAGGAATGGACTTTTGGGTTAGCTGGAAAGAAGAGCAGCTaGGAGAGGCTCCTGATCAGGCCTCGATCCCATCTCTGGCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: PFEEWTFGLAGKKSS*ERLLIRPRSHLWQG Trigger: TCCCTGCCAGAGATGGGATCGAGGCCTGATCAGGAGCCTCTCTCAGCTGCTCTTCTTTCCAGCTAACCCAAAAGTCCATTCCTCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 90 bp | TTCCAGGAAACATGTTTCTGCTCCATGGAGATGGGATGCCAGTGGTaGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTG | + |
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Preference number: 1 (lower is better) Translates to: FQETCFCSMEMGCQW*KTRKEREPLCRSTV Trigger: CACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGCATCCCATCTCCATGGAGCAGAAACATGTTTCCTGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 90 bp | TGCTTCCAGGAAACATGTTTCTGCTCCATGGAGATGGGATGCCAGTaGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACG | + |
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Preference number: 1 (lower is better) Translates to: CFQETCFCSMEMGCQ*WKTRKEREPLCRST Trigger: CGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGCATCCCATCTCCATGGAGCAGAAACATGTTTCCTGGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 90 bp | TGGTCACTGAGAGAAACAACCACAAGAGAAGCTGAGAGAGGACAATaGCTTTGGTATGAGGAAGACGTCCTCTCAGCATCTCTTACCTAC | + |
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Preference number: 1 (lower is better) Translates to: WSLRETTTREAERGQ*LWYEEDVLSASLTY Trigger: GTAGGTAAGAGATGCTGAGAGGACGTCTTCCTCATACCAAAGTCATTGTCCTCTCTCAGCTTCTCTTGTGGTTGTTTCTCTCAGTGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CAA 90 bp | AGCAGGTCCACCCTCGCCCTCCTCAGCTTCCAAGGCTGCCAACTCTaGAGTCTTCTCTCTCCCCATGCAGGGAGCGTGAGGGCTGAGACG | + |
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Preference number: 2 (lower is better) Translates to: SRSTLALLSFQGCQL*SLLSPHAGSVRAET Trigger: CGTCTCAGCCCTCACGCTCCCTGCATGGGGAGAGAGAAGACTCAAGAGTTGGCAGCCTTGGAAGCTGAGGAGGGCGAGGGTGGACCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CAA 90 bp | CTAAGCAGACCACTTCAGGTTCTTCCAGCTTGCGGTACCATGGCTTaGAGGGTCCTGCTGCTCGGCCCCATGTCCCCAAAGCCATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSRPLQVLPACGTMA*RVLLLGPMSPKPWQ Trigger: CTGCCATGGCTTTGGGGACATGGGGCCGAGCAGCAGGACCCTCAAAGCCATGGTACCGCAAGCTGGAAGAACCTGAAGTGGTCTGCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | CAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCGCGGTACCATGGCTTTaGGGGTCCTGCTGCTCGGCC | + |
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Preference number: 2 (lower is better) Translates to: QPTFFQKVAEKNKGMGPPAVPWL*GSCCSA Trigger: GGCCGAGCAGCAGGACCCTCAAAGCCATGGTACCGC...GGGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CAA 90 bp | CCTGAACCCAAGGAAAGGGGCTCTACCTCAGGGAGCCAAGGAACCTaGAACATTCGACTCCAAGAGCTACAGCAGCAGCCATGGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: PEPKERGSTSGSQGT*NIRLQELQQQPWGY Trigger: ATAGCCCCATGGCTGCTGCTGTAGCTCTTGGAGTCGAATGTTCAAGGTTCCTTGGCTCCCTGAGGTAGAGCCCCTTTCCTTGGGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTGTGCTCCGAGGGGAATaGAGTAAGTCAGGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SCLPKCFLETEDMRAPRAVLRGE*SKSGAG Trigger: CCCTGCACCTGACTTACTCCATTCCCCTCGGAGCAC...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCCTCGATCCCATCTCTaGCAGGGAGTGCTACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTHFLPKGSREEQGDGPSPRSHL*QGVLQN Trigger: GTTTTGTAGCACTCCCTGCCAGAGATGGGATCGAGG...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGTCCCCATTTGTCTCCTaGACCCAAGGAAAGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMSPFVS*TQGKGL Trigger: GAGCCCCTTTCCTTGGGTTCAGGAGACAAATGGGGA...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCATGTTTCTGCTCCATaGAGATGGGATGCCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PTHFLPKGSREEQGDGPSHVSAP*RWDASG Trigger: ACCACTGGCATCCCATCTCCATGGAGCAGAAACATG...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCCATGTTTCTGCTCCATaGAGATGGGATGCCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: QPTFFQKVAEKNKGMGPPHVSAP*RWDASG Trigger: ACCACTGGCATCCCATCTCCATGGAGCAGAAACATG...GGGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCAGGAAACATGTTTCTaGTCCATGGAGATGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: PTHFLPKGSREEQGDGPSQETCF*SMEMGC Trigger: GCATCCCATCTCCATGGAGCAGAAACATGTTTCCTG...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTAGCTTCCTGGATCTCTaGAGGTACTCAGTGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: SCLPKCFLETEDMRAPRASFLDL*RYSVHK Trigger: CTTGTGCACTGAGTACCTTCAGAGATCCAGGAAGCT...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGTGGAGACAGAGGATATaGGGGCACCAAGAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMWRQRI*GHQELK Trigger: TTTCAGCTCTTGGTGCCCTCATATCCTCTGTCTCCA...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCATCTGCTCCATGGAGATaGGATGCCAGTGGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: YSLEAQTTALVRNSPISSSAPWR*DASGGR Trigger: TCTTCCACCACTGGCATCCCATCTCCATGGAGCAGA...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTCAGGCTTTAGCTTCCTaGATCTCTGAAGGTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: SCLPKCFLETEDMRAPRAQALAS*ISEGTQ Trigger: CTGAGTACCTTCAGAGATCCAGGAAGCTAAAGCCTG...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGCTGAGAGAGGACAATaGCTTTGGTATGAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: VTTSLPTHFLPKGSREEQAERGQ*LWYEED Trigger: GTCTTCCTCATACCAAAGTCATTGTCCTCTCTCAGC...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCGCATTTTACAAACCATaGAGACAACACAAAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: QPTFFQKVAEKNKGMGPPAFYKP*RQHKSS Trigger: GCTACTTTTGTGTTGTCTCCATGGTTTGTAAAATGC...GGGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAAACCACAAGAGAAGCTaGGAGAGGACAATGACTTTG | + |
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Preference number: 2 (lower is better) Translates to: VTTSLPTHFLPKGSREEQNHKRS*ERTMTL Trigger: CAAAGTCATTGTCCTCTCTCAGCTTCTCTTGTGGTT...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCACCTCAGTTCCTTTTCTaGTTCCAGGAAACATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YSLEAQTTALVRNSPISSPQFLF*FQETCF Trigger: GAAACATGTTTCCTGGAAGCAGAAAAGGAACTGAGG...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAACACCCATTTGAGGAATaGACTTTTGGGTTAGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VTTSLPTHFLPKGSREEQHPFEE*TFGLAG Trigger: TCCAGCTAACCCAAAAGTCCATTCCTCAAATGGGTG...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR GCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACCAGGAAACATGTTTCTaGTCCATGGAGATGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: VTQTTYTNFWQNMVTERNQETCF*SMEMGC Trigger: GCATCCCATCTCCATGGAGCAGAAACATGTTTCCTG...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACGAGATGGGATGCCAGTaGTGGAAGACAAGGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VTQTTYTNFWQNMVTERNEMGCQ*WKTRKE Trigger: TTCTTTCCTTGTCTTCCACCACTGGCATCCCATCTC...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTAGCTTCCTGGATCTCTaGAGGTACTCAGTGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: FKYSGHSDHIYQFLAKHGSFLDL*RYSVHK Trigger: CTTGTGCACTGAGTACCTTCAGAGATCCAGGAAGCT...ACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCAGCCCATTTTCTCTTaGAGCCTCTGGTTAGACTCT | + |
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Preference number: 2 (lower is better) Translates to: FKYSGHSDHIYQFLAKHGQPIFS*SLWLDS Trigger: AGAGTCTAACCAGAGGCTGCAAGAGAAAATGGGCTG...ACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 72 bp | ACGGGACATCCCAGAGGGCAGCCTTCGCGGTCAAGCTaGGCACCTCCGACTCTCAGGAGGGCCACACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: TGHPRGQPSRSS*APPTLRRATPK Trigger: CTTGGGTGTGGCCCTCCTGAGAGTCGGAGGTGCCCAGCTTGACCGCGAAGGCTGCCCTCTGGGATGTCCCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR GCA 72 bp | AGCAGGTCCACCCTCGCCCTCCTCAGCTTCCAAGGCTaGCAACTCTTGAGTCTTCTCTCTCCCCATGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SRSTLALLSFQG*QLLSLLSPHAG Trigger: CCCTGCATGGGGAGAGAGAAGACTCAAGAGTTGGCAGCCTTGGAAGCTGAGGAGGGCGAGGGTGGACCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 72 bp | GCCATGGGGCTATACAGGTATTGTAGGCACGGGTGTTaGGGTCATCTGCGCACAGGACATCCTTGCTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: AMGLYRYCRHGC*GHLRTGHPCSL Trigger: TAGAGAGCAAGGATGTCCTGTGCGCAGATGACCCCAACACCCGTGCCTACAATACCTGTATAGCCCCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 72 bp | AGGAAAGGGGCTCTACCTCAGGGAGCCAAGGAACCTTaGACATTCGACTCCAAGAGCTACAGCAGCAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: RKGALPQGAKEP*TFDSKSYSSSH Trigger: ATGGCTGCTGCTGTAGCTCTTGGAGTCGAATGTTCAAGGTTCCTTGGCTCCCTGAGGTAGAGCCCCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR GCA 72 bp | CAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTaGAGGAGCACGGTGGAAAAGGTGCACTTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QWWKTRKEREPL*RSTVEKVHFPR Trigger: CCTGGGAAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR TCA 72 bp | GGAAGACGTCCTCTCAGCATCTCTTACCTACAGTCTTaGAGCCCAGACAACTGCCCTAGTCAGGAACTCTCC | + |
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Preference number: 3 (lower is better) Translates to: GRRPLSISYLQS*SPDNCPSQELS Trigger: GGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGTAAGAGATGCTGAGAGGACGTCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 72 bp | CCTATTTCCTCAAGGTATTTGGTGCTCCGAGGGGAATaGAGTAAGTCAGGTGCAGGGGAAGCAAAGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: PISSRYLVLRGE*SKSGAGEAKGH Trigger: GTGTCCCTTTGCTTCCCCTGCACCTGACTTACTCCATTCCCCTCGGAGCACCAAATACCTTGAGGAAATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR-3UTR CAA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACCTCTTACCTACAGTCTaGAAGCCCAGACAACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: VTQTTYTNFWQNMVTERNLLPTV*KPRQLP Trigger: GGGCAGTTGTCTGGGCTTCAAGACTGTAGGTAAGAG...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| 3UTR CCA 72 bp | AATACTCTGGTCACTCAGACCACATATACCAATTTTTaGCAAAACATGGTCACTGAGAGAAACAACCACAAG | + |
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Preference number: 3 (lower is better) Translates to: NTLVTQTTYTNF*QNMVTERNNHK Trigger: CTTGTGGTTGTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR GCA 90 bp | GCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGGCGGTGCGGGGCCGCTaGCTCCCTCCAGCTTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: ASGGRQGKKESHSAGARWAVRGR*LPPACP Trigger: CGGACAAGCTGGAGGGAGGCAGCGGCCCCGCACCGC...CCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060061.11 |
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| CDS-3UTR CCA 90 bp | GCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAGGCCTGGGGGAGGCTaGGGCCCTGAGCCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ASGGRQGKKESHSAGARWRPGGG*GPEPPP Trigger: AGGGGGAGGCTCAGGGCCCCAGCCTCCCCCAGGCCT...CCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CCA 90 bp | GCACGGGTGTTGGGGTCATCTGCGCACAGGACATCCTTGCTCTCTAAAACTTCCAGGCCTGGGGGAGGCTaGGGCCCTGAGCCTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARVLGSSAHRTSLLSKTSRPGGG*GPEPPP Trigger: AGGGGGAGGCTCAGGGCCCCAGCCTCCCCCAGGCCT...GGAAGTTTTAGAGAGCAAGGATGTCCTGTGCGCAGATGACCCCAACACCCGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCGGGCTGCCGACGAAGTaGCTGGGGACCCCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPTFFQKVAEKNKGMGPPGLPTK*LGTPSS Trigger: GGAGGAGGGGGTCCCCAGCCACTTCGTCGGCAGCCC...GGGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GCACGGGTGTTGGGGTCATCTGCGCACAGGACATCCTTGCTCTCTAAAACTTCCCCCGAATGGGGCTCCTaGGGAAAGGCGGTGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVLGSSAHRTSLLSKTSPEWGS*GKAVGA Trigger: GGCTCCCACCGCCTTTCCCCAGGAGCCCCATTCGGG...GGAAGTTTTAGAGAGCAAGGATGTCCTGTGCGCAGATGACCCCAACACCCGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | GCACGGGTGTTGGGGTCATCTGCGCACAGGACATCCTTGCTCTCTAAAACTTCCCCCCTCCTCCTCCAGTaGCGTAGCCTGGGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: ARVLGSSAHRTSLLSKTSPLLLQ*RSLGVP Trigger: AGGTACCCCCAGGCTACGGCACTGGAGGAGGAGGGG...GGAAGTTTTAGAGAGCAAGGATGTCCTGTGCGCAGATGACCCCAACACCCGTGC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGGGGCCTGGCATCACCTaGCCACCAGGTGGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASGGRQGKKESHSAGARWGPGIT*PPGGLK Trigger: CTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCC...CCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCCCGAATGGGGCTCCTaGGGAAAGGCGGTGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTHFLPKGSREEQGDGPSPEWGS*GKAVGA Trigger: GGCTCCCACCGCCTTTCCCCAGGAGCCCCATTCGGG...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCCGGCAGAGGCCTCGGTaGTCAGCAGGCCGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASRQRPR*SAGRRH Trigger: GTGCCTACGGCCTGCTGACCACCGAGGCCTCTGCCG...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| 3UTR CAA 72 bp | CCACTTCAGGTTCTTCCAGCTTGCGGTACCATGGCTTaGAGGGTCCTGCTGCTCGGCCCCATGTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQVLPACGTMA*RVLLLGPMSPK Trigger: CTTTGGGGACATGGGGCCGAGCAGCAGGACCCTCAAAGCCATGGTACCGCAAGCTGGAAGAACCTGAAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGGGTTGGGTAAAGCGTTaGGGGAGAGGAGGAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ASGGRQGKKESHSAGARWGWVKR*GRGGGP Trigger: GGGTCCTCCTCCTCTCCCCCAACGCTTTACCCAACC...CCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | AACAACAGAAGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTAGACCGGCCTTGCCCTaGTTCCTCCCGGTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNRRQATQAFLPVRLSSFRPALP*FLPVLG Trigger: GCCCAGCACCGGGAGGAAGCAGGGCAAGGCCGGTCT...AAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCTTCTGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060061.11 |
||
| CDS-3UTR GCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCGGGCCTGGCATCACCTaGCCACCAGGTGGGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASGPGIT*PPGGLK Trigger: CTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCC...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCAGGGCTGCCGACGAAGTaGCTGGGGACCCCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IRASCLPKCFLETEDMRAGLPTK*LGTPSS Trigger: GGAGGAGGGGGTCCCCAGCCACTTCGTCGGCAGCCC...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AACAACAGAAGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTGGCGGTGGGAGCCGGTaGGTTCAAGGGCTTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NNRRQATQAFLPVRLSSFGGGSR*VQGLPT Trigger: GGTGGGAAGCCCTTGAACCCACCGGCTCCCACCGCC...AAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCTTCTGTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTCATGGGGGTCGGGGGTaGGGCGAACTCCGTCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SCLPKCFLETEDMRAPRAHGGRG*GELRQM Trigger: CATCTGACGGAGTTCGCCCCACCCCCGACCCCCATG...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTTGCCGACGAAGTGGCTaGGGACCCCCTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCLPKCFLETEDMRAPRACRRSG*GPPPPP Trigger: TGGAGGAGGAGGGGGTCCCCAGCCACTTCGTCGGCA...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTTCCGCCTACTGGGCCTaGCATCACCTGCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLPKCFLETEDMRAPRASAYWA*HHLPTR Trigger: CCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGA...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCCAGACTGTTGGCATCTaGAGTGCCCCCACCTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASQTVGI*SAPTST Trigger: GGTCGAGGTGGGGGCACTCCAGATGCCAACAGTCTG...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTGGGGTGCCAGACTGTTaGCATCTGGAGTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DKERKRATLQEHGGKGALGVPDC*HLECPH Trigger: GTGGGGGCACTCCAGATGCCAACAGTCTGGCACCCC...AAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACGGCAGAGGCCTCGGTaGTCAGCAGGCCGTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IRASCLPKCFLETEDMRARQRPR*SAGRRH Trigger: GTGCCTACGGCCTGCTGACCACCGAGGCCTCTGCCG...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTTCCGGTGCACTCGCGGTaGAACCACTTCTGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRKEREPLCRSTVEKVHFPVHSR*NHFWQE Trigger: CTCCTGCCAGAAGTGGTTTCACCGCGAGTGCACCGG...AAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCTGGGAAAGTTCATGTTaGCAGGGGGCGGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTHFLPKGSREEQGDGPSWESSC*QGAGSQ Trigger: CTGGCTACCCGCCCCCTGGCAACATGAACTTTCCCA...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCCCCACCAACTGGCCCATaGCCTCTCGGATGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QPTFFQKVAEKNKGMGPPPPTGP*PLGCRQ Trigger: CTGTCTACATCCGAGAGGGCATGGGCCAGTTGGTGG...GGGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AACAACAGAAGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCCAGTGCCGTAGCCTaGGGGTACCTGGCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNRRQATQAFLPVRLSSFSSAVA*GYLACH Trigger: ATGGCAGGCCAGGTACCCCCAGGCTACGGCACTGGA...AAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCTTCTGTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTTCCAGTGCCGTAGCCTaGGGGTACCTGGCCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCLPKCFLETEDMRAPRASSAVA*GYLACH Trigger: ATGGCAGGCCAGGTACCCCCAGGCTACGGCACTGGA...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCATCCGCCTACTGGGCCTaGCATCACCTGCCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRASCLPKCFLETEDMRASAYWA*HHLPTR Trigger: CCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGA...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTGGTTGGGTAAAGCGTTaGGGGAGAGGAGGAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: DKERKRATLQEHGGKGALGWVKR*GRGGGP Trigger: GGGTCCTCCTCCTCTCCCCCAACGCTTTACCCAACC...AAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCGGCCCAGAGACTGGTTaGAGGGTTGACTGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASGPETG*RVDWES Trigger: ACTTTCCCAGTCAACCCTTCAACCAGTCTCTGGGCC...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCATGGGCTGATTCCCATTaGCAGCAGCAGCGGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLEAQTTALVRNSPISSWADSH*QQQRGS Trigger: GCTCCCCCGCTGCTGCTGTCAATGGGAATCAGCCCA...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCGGATCTCCTTGGTCTTaGGGCAAAGATCACAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASGSPWS*GKDHRP Trigger: GGGCCTGTGATCTTTGCCTCAAGACCAAGGAGATCC...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGTGTTGGCATCTGGAGTaGCCCCACCTCGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMCWHLE*PHLDHC Trigger: GCAGTGGTCGAGGTGGGGGCACTCCAGATGCCAACA...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGCAGACTGTTGGCATCTaGAGTGCCCCCACCTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMQTVGI*SAPTST Trigger: GGTCGAGGTGGGGGCACTCCAGATGCCAACAGTCTG...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCCTTTCATCAGGGGAAGGAGTGAGGTATAAGGGCTTCGTGCCTTCCCAATTAGCAGCCACCAACTaGCCCATGCCCTCTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: WILSSGEGVRYKGFVPSQLAATN*PMPSRM Trigger: CATCCGAGAGGGCATGGGCCAGTTGGTGGCTGCTAA...TTGGGAAGGCACGAAGCCCTTATACCTCACTCCTTCCCCTGATGAAAGGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| 3UTR CAA 72 bp | AAGGAAAGGGGCTCTACCTCAGGGAGCCAAGGAACCTaGAACATTCGACTCCAAGAGCTACAGCAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KERGSTSGSQGT*NIRLQELQQQP Trigger: TGGCTGCTGCTGTAGCTCTTGGAGTCGAATGTTCAAGGTTCCTTGGCTCCCTGAGGTAGAGCCCCTTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAATGGGCTGATTCCCATTaGCAGCAGCAGCGGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTTSLPTHFLPKGSREEQWADSH*QQQRGS Trigger: GCTCCCCCGCTGCTGCTGTCAATGGGAATCAGCCCA...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCCCACCAACTGGCCCATaGCCTCTCGGATGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISPPTGP*PLGCRQ Trigger: CTGTCTACATCCGAGAGGGCATGGGCCAGTTGGTGG...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCTGGTCGGTGAGATCATaGGACCAAATCCGCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTHFLPKGSREEQGDGPSWSVRS*DQIRLL Trigger: CAGTAGGCGGATTTGGTCCCATGATCTCACCGACCA...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGAAGGGACTTGTGTTaGGGGGCAGGCTGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTTSLPTHFLPKGSREEQGRDLC*GAGWGV Trigger: GACTCCCCAGCCTGCCCCCCAACACAAGTCCCTTCC...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACGCGGGGGAGCCCGAATaGGGCTCCTGGGGAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VTQTTYTNFWQNMVTERNAGEPE*GSWGKA Trigger: CGCCTTTCCCCAGGAGCCCCATTCGGGCTCCCCCGC...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCCTGTCCCATGGTCGGTaGGATCATGGGACCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISLSHGR*DHGTKS Trigger: GGATTTGGTCCCATGATCTCACCGACCATGGGACAG...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | AGACAAGCAACCCAGGCTTTTCTGCCTGTCCGCCTCAGTTCCTTTTCTGCTTCCAGAAGGACCAAAAGGTaGTCCTGGTTGGGTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RQATQAFLPVRLSSFSASRRTKR*SWLGKA Trigger: CGCTTTACCCAACCAGGAGCACCTTTTGGTCCTTCT...GGAAGCAGAAAAGGAACTGAGGCGGACAGGCAGAAAAGCCTGGGTTGCTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGTATGAGGAAGACGTCCTCTCAGCATCTCTTACCTACAGTCTTGAAGCCCTTAGCAGCCACCAACTaGCCCATGCCCTCTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FGMRKTSSQHLLPTVLKPLAATN*PMPSRM Trigger: CATCCGAGAGGGCATGGGCCAGTTGGTGGCTGCTAA...GGGCTTCAAGACTGTAGGTAAGAGATGCTGAGAGGACGTCTTCCTCATACCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCAGGCCCAGAGACTGGTTaGAGGGTTGACTGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSLEAQTTALVRNSPISSGPETG*RVDWES Trigger: ACTTTCCCAGTCAACCCTTCAACCAGTCTCTGGGCC...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCACTGTCCCATGGTCGGTaGGATCATGGGACCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YSLEAQTTALVRNSPISSLSHGR*DHGTKS Trigger: GGATTTGGTCCCATGATCTCACCGACCATGGGACAG...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACTGCCGACGAAGTGGCTaGGGACCCCCTCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTQTTYTNFWQNMVTERNCRRSG*GPPPPP Trigger: TGGAGGAGGAGGGGGTCCCCAGCCACTTCGTCGGCA...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTTTGGTCGGTGAGATCATaGGACCAAATCCGCCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TRKEREPLCRSTVEKVHFWSVRS*DQIRLL Trigger: CAGTAGGCGGATTTGGTCCCATGATCTCACCGACCA...AAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACTTTGCAGACCGGCCTTaGCCTGCTTCCTCCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTQTTYTNFWQNMVTERNFADRP*PASSRC Trigger: GCACCGGGAGGAAGCAGGGCAAGGCCGGTCTGCAAA...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060061.11 |
||
| CDS-3UTR GCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCAGAAGGACCAAAAGGTaGTCCTGGTTGGGTAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISRRTKR*SWLGKA Trigger: CGCTTTACCCAACCAGGAGCACCTTTTGGTCCTTCT...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCGGTGGGCTAAAGTTTTaGCCCAGAGACTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISGGLKF*PRDWLK Trigger: CTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACC...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGCGGGGGAGCCCGAATaGGGCTCCTGGGGAAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHAGEPE*GSWGKA Trigger: CGCCTTTCCCCAGGAGCCCCATTCGGGCTCCCCCGC...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTTGAATATGCAGGACCCTaGGTATTGGACTTTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TRKEREPLCRSTVEKVHFEYAGP*VLDFLR Trigger: GCGAAGAAAGTCCAATACTCAGGGTCCTGCATATTC...AAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACTGTTGGCATCTGGAGTaGCCCCACCTCGACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTQTTYTNFWQNMVTERNCWHLE*PHLDHC Trigger: GCAGTGGTCGAGGTGGGGGCACTCCAGATGCCAACA...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCAGGTGGGCTAAAGTTTTaGCCCAGAGACTGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IRASCLPKCFLETEDMRAGGLKF*PRDWLK Trigger: CTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACC...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGCGGTGGGAGCCGGTaGGTTCAAGGGCTTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHGGGSR*VQGLPT Trigger: GGTGGGAAGCCCTTGAACCCACCGGCTCCCACCGCC...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCAGAATATGCAGGACCCTaGGTATTGGACTTTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSLEAQTTALVRNSPISSEYAGP*VLDFLR Trigger: GCGAAGAAAGTCCAATACTCAGGGTCCTGCATATTC...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCAGACTGGTTGAAGGGTTaGCTGGGAAAGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IRASCLPKCFLETEDMRADWLKG*LGKFML Trigger: CAACATGAACTTTCCCAGTCAACCCTTCAACCAGTC...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCCGGTGCACTCGCGGTaGAACCACTTCTGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKYSGHSDHIYQFLAKHGPVHSR*NHFWQE Trigger: CTCCTGCCAGAAGTGGTTTCACCGCGAGTGCACCGG...ACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATCCCCTCCTCCTCCAGTaGCGTAGCCTGGGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHPLLLQ*RSLGVP Trigger: AGGTACCCCCAGGCTACGGCACTGGAGGAGGAGGGG...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTGGAAGGGACTTGTGTTaGGGGGCAGGCTGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKYSGHSDHIYQFLAKHGGRDLC*GAGWGV Trigger: GACTCCCCAGCCTGCCCCCCAACACAAGTCCCTTCC...ACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTCACAGAATGGCATCCTaGTCATCATTTACCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: DKERKRATLQEHGGKGALHRMAS*SSFTSL Trigger: TAGTGAGGTAAATGATGACCAGGATGCCATTCTGTG...AAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CCA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTAGGCCTCACACAGAATaGCATCCTGGTCATCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCLPKCFLETEDMRAPRARPHTE*HPGHHL Trigger: TAAATGATGACCAGGATGCCATTCTGTGTGAGGCCT...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCAGGCCTCACACAGAATaGCATCCTGGTCATCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISRPHTE*HPGHHL Trigger: TAAATGATGACCAGGATGCCATTCTGTGTGAGGCCT...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR TCA 90 bp | GTAACCACATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGACTGGTTGAAGGGTTaGCTGGGAAAGTTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTTSLPTHFLPKGSREEQDWLKG*LGKFML Trigger: CAACATGAACTTTCCCAGTCAACCCTTCAACCAGTC...TTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATGTGGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCCAGGACCCTGAGTATTaGACTTTCTTCGCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYSLEAQTTALVRNSPISQDPEY*TFFASF Trigger: AAAAGAAGCGAAGAAAGTCCAATACTCAGGGTCCTG...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGGGTGCCAGACTGTTaGCATCTGGAGTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHGVPDC*HLECPH Trigger: GTGGGGGCACTCCAGATGCCAACAGTCTGGCACCCC...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTCACAGGACCCTGAGTATTaGACTTTCTTCGCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSLEAQTTALVRNSPISSQDPEY*TFFASF Trigger: AAAAGAAGCGAAGAAAGTCCAATACTCAGGGTCCTG...TGAGGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATTGGGAAAGTTCATGTTaGCAGGGGGCGGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHWESSC*QGAGSQ Trigger: CTGGCTACCCGCCCCCTGGCAACATGAACTTTCCCA...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGAACTCCGTCAGATGTaGATATGCAGGACCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFKYSGHSDHIYQFLAKHELRQM*ICRTLS Trigger: ACTCAGGGTCCTGCATATTCACATCTGACGGAGTTC...ATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CCA 90 bp | GTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTCACTGAGAGAAACCACAGAATGGCATCCTaGTCATCATTTACCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VTQTTYTNFWQNMVTERNHRMAS*SSFTSL Trigger: TAGTGAGGTAAATGATGACCAGGATGCCATTCTGTG...GTTTCTCTCAGTGACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS GCA 90 bp | CGGCAGAGGCCTCGGTGGTCAGCAGGCCGTAGGCACTCTCGGTCATaGCGGTGCACTCGCGGTGAAACCACTTCTGGCAGGAGGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQRPRWSAGRRHSRS*RCTRGETTSGRRPH Trigger: GTGAGGCCTCCTGCCAGAAGTGGTTTCACCGCGAGTGCACCGGCATGACCGAGAGTGCCTACGGCCTGCTGACCACCGAGGCCTCTGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS TCA 90 bp | AGGAGGAGGACCCAGCTCCCCTCTAGGAGGCTGTCCCATGGTCGGTaGGATCATGGGACCAAATCCGCCTACTGGGCCTGGCATCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRRTQLPSRRLSHGR*DHGTKSAYWAWHHL Trigger: CAGGTGATGCCAGGCCCAGTAGGCGGATTTGGTCCCATGATCTCACCGACCATGGGACAGCCTCCTAGAGGGGAGCTGGGTCCTCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS CCA 90 bp | GGGACCAAATCCGCCTACTGGGCCTGGCATCACCTGCCCACCAGGTaGGCTAAAGTTTTGGCCCAGAGACTGGTTGAAGGGTTGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTKSAYWAWHHLPTR*AKVLAQRLVEGLTG Trigger: CCCAGTCAACCCTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGATTTGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS GCA 90 bp | GGTGAGATCATGGGACCAAATCCGCCTACTGGGCCTGGCATCACCTaGCCACCAGGTGGGCTAAAGTTTTGGCCCAGAGACTGGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GEIMGPNPPTGPGIT*PPGGLKFWPRDWLK Trigger: CTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGATTTGGTCCCATGATCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CAA 90 bp | TGGATCCTTTCATCAGGGGAAGGAGTGAGGTATAAGGGCTTCGTGCCTTCCCAAATTTGCAGACCGGCCTaGCCCTGCTTCCTCCCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WILSSGEGVRYKGFVPSQICRPA*PCFLPV Trigger: CACCGGGAGGAAGCAGGGCAAGGCCGGTCTGCAAAT...TTGGGAAGGCACGAAGCCCTTATACCTCACTCCTTCCCCTGATGAAAGGATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060061.11 |
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| CDS-3UTR CAA 90 bp | GCCAGTGGTGGAAGACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCTCCTGGTaGGGTAAAGCGTTGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASGGRQGKKESHSAGARWKRCSW*GKALGE Trigger: CTCCCCCAACGCTTTACCCAACCAGGAGCACCTTTT...CCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTCTTCCACCACTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CAA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGGGGTGCCAGACTGTaGGCATCTGGAGTGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMGGARL*ASGVPP Trigger: TGGGGGCACTCCAGATGCCAACAGTCTGGCACCCCC...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS-3UTR CAA 90 bp | TCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCACCAAGAGCTGGGGGTGCCAGACTGTaGGCATCTGGAGTGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCLPKCFLETEDMRAPRAGGARL*ASGVPP Trigger: TGGGGGCACTCCAGATGCCAACAGTCTGGCACCCCC...AGCTCTTGGTGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | GCACGGGTGTTGGGGTCATCTGCGCACAGGACATCCTTGCTCTCTAAAACTTCCAAAAGGTGCTCCTGGTaGGGTAAAGCGTTGGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARVLGSSAHRTSLLSKTSKRCSW*GKALGE Trigger: CTCCCCCAACGCTTTACCCAACCAGGAGCACCTTTT...GGAAGTTTTAGAGAGCAAGGATGTCCTGTGCGCAGATGACCCCAACACCCGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | ACCTACAGTCTTGAAGCCCAGACAACTGCCCTAGTCAGGAACTCTCCTATTTCCTGGTTGGGTAAAGCGTaGGGGGAGAGGAGGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TYSLEAQTTALVRNSPISWLGKA*GERRRT Trigger: GGTCCTCCTCCTCTCCCCCAACGCTTTACCCAACCA...GGAAATAGGAGAGTTCCTGACTAGGGCAGTTGTCTGGGCTTCAAGACTGTAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGTATGAGGAAGACGTCCTCTCAGCATCTCTTACCTACAGTCTTGAAGCCCTGGTTGGGTAAAGCGTaGGGGGAGAGGAGGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FGMRKTSSQHLLPTVLKPWLGKA*GERRRT Trigger: GGTCCTCCTCCTCTCCCCCAACGCTTTACCCAACCA...GGGCTTCAAGACTGTAGGTAAGAGATGCTGAGAGGACGTCTTCCTCATACCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | GACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTAGGTGGGCTAAAGTTTaGGCCCAGAGACTGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DKERKRATLQEHGGKGALRWAKV*AQRLVE Trigger: TTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCT...AAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGGAAAGAAAGAGAGCCACTCTGCAGGAGCACGGTGGAAAAGGTGCACTTTTGGATCTCCTTGGTCTaGAGGCAAAGATCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRKEREPLCRSTVEKVHFWISLV*RQRSQA Trigger: GGCCTGTGATCTTTGCCTCAAGACCAAGGAGATCCA...AAAGTGCACCTTTTCCACCGTGCTCCTGCAGAGTGGCTCTCTTTCTTTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | CCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGGGCCCTCCACAGACTGGATCTCCTaGGTCTTGAGGCAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PTHFLPKGSREEQGDGPSTDWIS*VLRQRS Trigger: TGATCTTTGCCTCAAGACCAAGGAGATCCAGTCTGT...GGAGGGCCCATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | CATCCCTGCCAACCCACTTTCTTCCAAAAGGTAGCAGAGAAGAACAAGGGGATGAGGTGGGCTAAAGTTTaGGCCCAGAGACTGGTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HPCQPTFFQKVAEKNKGMRWAKV*AQRLVE Trigger: TTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCT...CATCCCCTTGTTCTTCTCTGCTACCTTTTGGAAGAAAGTGGGTTGGCAGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGGGCTTCGTGCCTTCCCAAATGTTTTCTGGAGACAGAGGATATGAGGGCATGGATCTCCTTGGTCTaGAGGCAAAGATCACAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRASCLPKCFLETEDMRAWISLV*RQRSQA Trigger: GGCCTGTGATCTTTGCCTCAAGACCAAGGAGATCCA...TGCCCTCATATCCTCTGTCTCCAGAAAACATTTGGGAAGGCACGAAGCCCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGTATGAGGAAGACGTCCTCTCAGCATCTCTTACCTACAGTCTTGAAGCCCACAGACTGGATCTCCTaGGTCTTGAGGCAAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: FGMRKTSSQHLLPTVLKPTDWIS*VLRQRS Trigger: TGATCTTTGCCTCAAGACCAAGGAGATCCAGTCTGT...GGGCTTCAAGACTGTAGGTAAGAGATGCTGAGAGGACGTCTTCCTCATACCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | TTTGGTATGAGGAAGACGTCCTCTCAGCATCTCTTACCTACAGTCTTGAAGCCCAGACTGGTTGAAGGGTaGACTGGGAAAGTTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FGMRKTSSQHLLPTVLKPRLVEG*TGKVHV Trigger: AACATGAACTTTCCCAGTCAACCCTTCAACCAGTCT...GGGCTTCAAGACTGTAGGTAAGAGATGCTGAGAGGACGTCTTCCTCATACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAATACTCTGGTCACTCAGACCACATATACCAATTTTTGGCAAAACATGGTAGACTGGTTGAAGGGTaGACTGGGAAAGTTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: FKYSGHSDHIYQFLAKHGRLVEG*TGKVHV Trigger: AACATGAACTTTCCCAGTCAACCCTTCAACCAGTCT...ACCATGTTTTGCCAAAAATTGGTATATGTGGTCTGAGTGACCAGAGTATTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS CCA 72 bp | TTGACAGCAGCAGCGGGGGAGCCCGAATGGGGCTCCTaGGGAAAGGCGGTGGGAGCCGGTGGGTTCAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LTAAAGEPEWGS*GKAVGAGGFKG Trigger: GCCCTTGAACCCACCGGCTCCCACCGCCTTTCCCCAGGAGCCCCATTCGGGCTCCCCCGCTGCTGCTGTCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
||
| CDS GCA 72 bp | CTCCAGTGCCGTAGCCTGGGGGTACCTGGCCTGCCATaGCCCCCTGTACACGAAAGCCTCCAAAGGGCACCG | + |
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Preference number: 6 (lower is better) Translates to: LQCRSLGVPGLP*PPVHESLQRAP Trigger: CGGTGCCCTTTGGAGGCTTTCGTGTACAGGGGGGCATGGCAGGCCAGGTACCCCCAGGCTACGGCACTGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS GCA 72 bp | CCTCGGTGGTCAGCAGGCCGTAGGCACTCTCGGTCATaGCGGTGCACTCGCGGTGAAACCACTTCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRWSAGRRHSRS*RCTRGETTSGR Trigger: CCTGCCAGAAGTGGTTTCACCGCGAGTGCACCGGCATGACCGAGAGTGCCTACGGCCTGCTGACCACCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS GCA 72 bp | TGGTCAGCAGGCCGTAGGCACTCTCGGTCATGCCGGTaGACTCGCGGTGAAACCACTTCTGGCAGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: WSAGRRHSRSCR*TRGETTSGRRP Trigger: AGGCCTCCTGCCAGAAGTGGTTTCACCGCGAGTGCACCGGCATGACCGAGAGTGCCTACGGCCTGCTGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS TCA 72 bp | ACCCAGCTCCCCTCTAGGAGGCTGTCCCATGGTCGGTaGGATCATGGGACCAAATCCGCCTACTGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TQLPSRRLSHGR*DHGTKSAYWAW Trigger: CCAGGCCCAGTAGGCGGATTTGGTCCCATGATCTCACCGACCATGGGACAGCCTCCTAGAGGGGAGCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS CCA 72 bp | TCCGCCTACTGGGCCTGGCATCACCTGCCCACCAGGTaGGCTAAAGTTTTGGCCCAGAGACTGGTTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SAYWAWHHLPTR*AKVLAQRLVEG Trigger: CCCTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS GCA 72 bp | ATGGGACCAAATCCGCCTACTGGGCCTGGCATCACCTaGCCACCAGGTGGGCTAAAGTTTTGGCCCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: MGPNPPTGPGIT*PPGGLKFWPRD Trigger: GTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGCGGATTTGGTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS CAA 72 bp | GCCTGGCATCACCTGCCCACCAGGTGGGCTAAAGTTTaGGCCCAGAGACTGGTTGAAGGGTTGACTGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AWHHLPTRWAKV*AQRLVEGLTGK Trigger: TTTCCCAGTCAACCCTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS CAA 90 bp | GCCTACTGGGCCTGGCATCACCTGCCCACCAGGTGGGCTAAAGTTTaGGCCCAGAGACTGGTTGAAGGGTTGACTGGGAAAGTTCATGTT | + |
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Preference number: 6 (lower is better) Translates to: AYWAWHHLPTRWAKV*AQRLVEGLTGKVHV Trigger: AACATGAACTTTCCCAGTCAACCCTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCACCTGGTGGGCAGGTGATGCCAGGCCCAGTAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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| CDS CAA 72 bp | TGGGCTAAAGTTTTGGCCCAGAGACTGGTTGAAGGGTaGACTGGGAAAGTTCATGTTGCCAGGGGGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: WAKVLAQRLVEG*TGKVHVARGRV Trigger: TACCCGCCCCCTGGCAACATGAACTTTCCCAGTCAACCCTTCAACCAGTCTCTGGGCCAAAACTTTAGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060061.11 ENSMUST00000107413.2 |
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