Pregenerated sensors for PYGB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033059Ensembl transcript IDs: ENSMUST00000045441.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGGACCTCATGCACAGGGCAGCAGATGACCAGCCCTAGAACCTaGCCACCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTA | + |
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Preference number: 1 (lower is better) Translates to: QGTSCTGQQMTSPRT*PPTPTSYHSGSGDL Trigger: TAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGGTGGGCAGGTTCTAGGGCTGGTCATCTGCTGCCCTGTGCATGAGGTCCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR TCA 90 bp | GTCATGTATTGCGGCTTCAGGGGACCTCATGCACAGGGCAGCAGATaGCCAGCCCTAGAACCTGCCCACCCACCCCCACAAGCTACCACA | + |
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Preference number: 1 (lower is better) Translates to: VMYCGFRGPHAQGSR*PALEPAHPPPQATT Trigger: TGTGGTAGCTTGTGGGGGTGGGTGGGCAGGTTCTAGGGCTGGTCATCTGCTGCCCTGTGCATGAGGTCCCCTGAAGCCGCAATACATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 90 bp | AGCACAGCTCCTGTGGTGGGTCCTCACCATGCTGCTGTAGCAGAGTaGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTC | + |
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Preference number: 1 (lower is better) Translates to: STAPVVGPHHAAVAE*SVHWTLCRASSLVV Trigger: GACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTACAGCAGCATGGTGAGGACCCACCACAGGAGCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 90 bp | CTTCTTCCTCATCCAGGTCCTCAAAACCATTCCCATGGTCCTTCCTaGAAGCATGGCACTTCGGATAGCAGGGACCAGCGGCTGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: LLPHPGPQNHSHGPS*KHGTSDSRDQRLLA Trigger: TGCAAGCAGCCGCTGGTCCCTGCTATCCGAAGTGCCATGCTTCCAGGAAGGACCATGGGAATGGTTTTGAGGACCTGGATGAGGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR GCA 90 bp | GCTGAAGCTGTGGGGACCATCTCTGCCCATCTGTGCTGTGAACTCTaGAACAGTTCTTCTGTAAGAAGCCAGGAGGATGCCACGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AEAVGTISAHLCCEL*NSSSVRSQEDATPS Trigger: AGAAGGCGTGGCATCCTCCTGGCTTCTTACAGAAGAACTGTTGCAGAGTTCACAGCACAGATGGGCAGAGATGGTCCCCACAGCTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGCAAATGCTCCCATGGTGGGGAAAGCGAGGGGTTCTCCTGCCCACCCCCTCTCTCTCTCTTCAGTaGTCCTCTCCAGGGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SQQMLPWWGKRGVLLPTPSLSLQ*SSPGVL Trigger: CAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGA...GGGGGTGGGCAGGAGAACCCCTCGCTTTCCCCACCATGGGAGCATTTGCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGCCCACCCCCAACCAGATAGAGCAGTGCAAGGTGGTGAAGCCTCTGGAGTAGATTCTGCCCTCTaGGGAGCACAGCTCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPAHPQPDRAVQGGEASGVDSAL*GAQLLW Trigger: CCACAGGAGCTGTGCTCCTCAGAGGGCAGAATCTAC...TCCAGAGGCTTCACCACCTTGCACTGCTCTATCTGGTTGGGGGTGGGCAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTGCTGCTTGCAGTGCCTaGAGACTGGCGTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCAACSA*RLAWAQ Trigger: CTGTGCCCACGCCAGTCTTCAGGCACTGCAAGCAGC...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCTCCCATGGTCCTTCCTaGAAGCATGGCACTTCGGAT | + |
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Preference number: 2 (lower is better) Translates to: VSLSSVLLSRGSGFYLTPSHGPS*KHGTSD Trigger: ATCCGAAGTGCCATGCTTCCAGGAAGGACCATGGGA...GGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGCAGAGTGGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCCTGTGCTGTGAACTCTaGAACAGTTCTTCTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VAEWSVHWTLCRASSLVVLCCEL*NSSSVR Trigger: TCTTACAGAAGAACTGTTGCAGAGTTCACAGCACAG...GACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTATCTCTGCCCATCTGTaGTGTGAACTCTGCAACAGT | + |
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Preference number: 2 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCISAHL*CELCNS Trigger: ACTGTTGCAGAGTTCACAGCACAGATGGGCAGAGAT...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTTCAAAACCATTCCCATaGTCCTTCCTGGAAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCSKPFP*SFLEAW Trigger: CCATGCTTCCAGGAAGGACCATGGGAATGGTTTTGA...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR CCA 90 bp | TACAAGGAGGTAATAGCAAGTAGTAGAAGGGTGGTCATGTATTGCGGCTTCAGGGCTGGCTGTACCCTATaGCTGGTGACCCAGGTACTA | + |
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Preference number: 2 (lower is better) Translates to: YKEVIASSRRVVMYCGFRAGCTL*LVTQVL Trigger: TAGTACCTGGGTCACCAGCCATAGGGTACAGCCAGC...CCTGAAGCCGCAATACATGACCACCCTTCTACTACTTGCTATTACCTCCTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTTGAAAAAGCAAAGAACTAAACCAACCCTCTATAAAATTGCCAGTCCTGGGATGATGATGGGCTaGAGCTGTGGGGACCATCTC | + |
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Preference number: 2 (lower is better) Translates to: FLLKKQRTKPTLYKIASPGMMMG*SCGDHL Trigger: GAGATGGTCCCCACAGCTTCAGCCCATCATCATCCC...AGGACTGGCAATTTTATAGAGGGTTGGTTTAGTTCTTTGCTTTTTCAACAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR TCA 72 bp | TGCGGCTTCAGGGGACCTCATGCACAGGGCAGCAGATaGCCAGCCCTAGAACCTGCCCACCCACCCCCACAA | + |
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Preference number: 3 (lower is better) Translates to: CGFRGPHAQGSR*PALEPAHPPPQ Trigger: TTGTGGGGGTGGGTGGGCAGGTTCTAGGGCTGGTCATCTGCTGCCCTGTGCATGAGGTCCCCTGAAGCCGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | CCTGTGGTGGGTCCTCACCATGCTGCTGTAGCAGAGTaGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: PVVGPHHAAVAE*SVHWTLCRASS Trigger: GCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTACAGCAGCATGGTGAGGACCCACCACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | TCTACCCAGCAGGCCAACAAGACCACACACTGGGGCTaGCTGTACCCTATGGCTGGTGACCCAGGTACTAGC | + |
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Preference number: 3 (lower is better) Translates to: STQQANKTTHWG*LYPMAGDPGTS Trigger: GCTAGTACCTGGGTCACCAGCCATAGGGTACAGCCAGCCCCAGTGTGTGGTCTTGTTGGCCTGCTGGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | TGCTCGGCCTCTGGGGATGATGATGGGCTGAAGCTGTaGGGACCATCTCTGCCCATCTGTGCTGTGAACTCT | + |
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Preference number: 3 (lower is better) Translates to: CSASGDDDGLKL*GPSLPICAVNS Trigger: AGAGTTCACAGCACAGATGGGCAGAGATGGTCCCCACAGCTTCAGCCCATCATCATCCCCAGAGGCCGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR TCA 72 bp | CTCCTTTGGGCGGCACTTAATGTAGATTCTGCCCTCTaGGGAGCACAGCTCCTGTGGTGGGTCCTCACCATG | + |
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Preference number: 3 (lower is better) Translates to: LLWAALNVDSAL*GAQLLWWVLTM Trigger: CATGGTGAGGACCCACCACAGGAGCTGTGCTCCTCAGAGGGCAGAATCTACATTAAGTGCCGCCCAAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | CATCCAGGTCCTCAAAACCATTCCCATGGTCCTTCCTaGAAGCATGGCACTTCGGATAGCAGGGACCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: HPGPQNHSHGPS*KHGTSDSRDQR Trigger: CCGCTGGTCCCTGCTATCCGAAGTGCCATGCTTCCAGGAAGGACCATGGGAATGGTTTTGAGGACCTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | CCAACAAGACCACACACTGGGGCTGGCTGTACCCTATaGCTGGTGACCCAGGTACTAGCAGAACATAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: PTRPHTGAGCTL*LVTQVLAEHRN Trigger: GTTCCTATGTTCTGCTAGTACCTGGGTCACCAGCCATAGGGTACAGCCAGCCCCAGTGTGTGGTCTTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | GGTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTaGGTTCTACTTGACACCCACAGGGTTCCACAGATG | + |
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Preference number: 3 (lower is better) Translates to: GLSLFSAPLQGF*VLLDTHRVPQM Trigger: CATCTGTGGAACCCTGTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR TCA 72 bp | CAAGGGCAAAGGACAGGAAGCTGTGAGCATGAAGCCTaGAGCAAAGGTTCTACCCAGCAGGCCAACAAGACC | + |
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Preference number: 3 (lower is better) Translates to: QGQRTGSCEHEA*SKGSTQQANKT Trigger: GGTCTTGTTGGCCTGCTGGGTAGAACCTTTGCTTCAGGCTTCATGCTCACAGCTTCCTGTCCTTTGCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR GCA 72 bp | GAGGTAATAGCAAGTAGTAGAAGGGTGGTCATGTATTaGGGCTTCAGGGGACCTCATGCACAGGGCAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: EVIASSRRVVMY*GFRGPHAQGSR Trigger: TCTGCTGCCCTGTGCATGAGGTCCCCTGAAGCCGCAATACATGACCACCCTTCTACTACTTGCTATTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CCA 72 bp | ACAGGGTTCCACAGATGGCTAGAGGCATGGCCTATATaGGTCAACCACCCACATACTCAGTACAGTCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: TGFHRWLEAWPI*VNHPHTQYSQG Trigger: CCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCATATAGGCCATGCCTCTAGCCATCTGTGGAACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR GCA 72 bp | ACTCTGCAACAGTTCTTCTGTAAGAAGCCAGGAGGATaGCACGCCTTCTTCCTCATCCAGGTCCTCAAAACC | + |
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Preference number: 3 (lower is better) Translates to: TLQQFFCKKPGG*HAFFLIQVLKT Trigger: GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACAGAAGAACTGTTGCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGCAAATGCTCCCATGGTGGGGAAAGCGAGGGGTTCTCCTGCCCACCCCCATCAAGGAAGCAGGCTaGCAGGCGCCCCAGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: SQQMLPWWGKRGVLLPTPIKEAG*QAPQAA Trigger: GGCGGCCTGGGGCGCCTGGCAGCCTGCTTCCTTGAT...GGGGGTGGGCAGGAGAACCCCTCGCTTTCCCCACCATGGGAGCATTTGCTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | TCCCAGCAAATGCTCCCATGGTGGGGAAAGCGAGGGGTTCTCCTGCCCACCCCCAATGCAGGTGTCTGTTaGAGCTCTTCCGCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SQQMLPWWGKRGVLLPTPNAGVC*SSSAPR Trigger: CCGAGGTGCGGAAGAGCTTCAACAGACACCTGCATT...GGGGGTGGGCAGGAGAACCCCTCGCTTTCCCCACCATGGGAGCATTTGCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | TCCCAGCAAATGCTCCCATGGTGGGGAAAGCGAGGGGTTCTCCTGCCCACCCCCCTTCGAATGATGTCCTaGAGGGTGGCAGCCACCACA | + |
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Preference number: 4 (lower is better) Translates to: SQQMLPWWGKRGVLLPTPLRMMS*RVAATT Trigger: TGTGGTGGCTGCCACCCTCCAGGACATCATTCGAAG...GGGGGTGGGCAGGAGAACCCCTCGCTTTCCCCACCATGGGAGCATTTGCTGGGA 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATACCCGCAGTGGAGATCTaGTGGGACAGGTCAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIPAVEI*WDRSAA Trigger: AGCGGCTGACCTGTCCCAGCAGATCTCCACTGCGGG...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCATTCCCATGCAGCGGCCCACTAGGTaGTCGCGAACTGTGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGGCHAFFLIQVLKTIPMQRPTR*SRTVCA Trigger: GGCACACACAGTTCGCGACCACCTAGTGGGCCGCTG...CATGGGAATGGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCCCCGGGCGTATTCAGTaGTGGTCCGGTCACTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VSLSSVLLSRGSGFYLTPPGRIQ*WSGHWR Trigger: TCTCCAGTGACCGGACCATCACTGAATACGCCCGGG...GGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | GTAGCAGAGTGGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGTGGCTTCGTCGCATaGAGTCTGAAGGCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VAEWSVHWTLCRASSLVVSGFVA*SLKAQV Trigger: AACCTGGGCCTTCAGACTGCATGCGACGAAGCCACT...GACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | GTAGCAGAGTGGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCCAGCCAGACCCAGGGTaGCCATTGAATCAAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VAEWSVHWTLCRASSLVVQPDPG*PLNQGS Trigger: GCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTG...GACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | AAGACCACACACTGGGGCTGGCTGTACCCTATGGCTGGTGACCCAGGTACTAGCGAAACAGGTTCTCACTaGGTCCCGGCAGCCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: KTTHWGWLYPMAGDPGTSETGSH*VPAAKP Trigger: AGGTTTGGCTGCCGGGACCCAGTGAGAACCTGTTTC...GCTAGTACCTGGGTCACCAGCCATAGGGTACAGCCAGCCCCAGTGTGTGGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | TTAAGCTCACTCAGCTACGTGCAGGATTTCAGGGGCTCAGCTCCACTCCCTCCCACCCCGTTCACAGCGTaGGACCCAATCACACACAGG | + |
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Preference number: 4 (lower is better) Translates to: LSSLSYVQDFRGSAPLPPTPFTA*DPITHR Trigger: CCTGTGTGTGATTGGGTCCCACGCTGTGAACGGGGT...GGGAGGGAGTGGAGCTGAGCCCCTGAAATCCTGCACGTAGCTGAGTGAGCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATAACCCAGGGTGGCCATTaGATCAAGGAAGCAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEITQGGH*IKEAGC Trigger: GCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGT...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | CTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCACCCAGGAAGATCACTCTaGGCCTGTCGCCCACAACTG | + |
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Preference number: 4 (lower is better) Translates to: LSLFSAPLQGFWVLLDTHPGRSL*ACRPQL Trigger: CAGTTGTGGGCGACAGGCTCAGAGTGATCTTCCTGG...GTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATAGATTCCATAGCCGTATaGAGCCAGACCCAGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIDSIAV*SQTQGG Trigger: GCCACCCTGGGTCTGGCTGCATACGGCTATGGAATC...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGAAGCCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCCATGTACTCCGGCCGTaGCTTCTCCCAGGGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CKKPGGCHAFFLIQVLKTHVLRP*LLPGVS Trigger: GGAAACCCCTGGGAGAAGGCACGGCCGGAGTACATG...GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | GGTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCACAGGTCTTCTTGGTaGTCTCCCAGGCCTTATCCC | + |
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Preference number: 4 (lower is better) Translates to: GLSLFSAPLQGFWVLLDTHRSSW*SPRPYP Trigger: GGGATAAGGCCTGGGAGATCACCAAGAAGACCTGTG...GGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACAAAGCCACTGCTGATCTaGTCCACAGCCTGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTKPLLI*STACLS Trigger: GCTGAGGCAGGCTGTGGATCAGATCAGCAGTGGCTT...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGAAGCCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCCCACGCACGCTGATCTaGTTCTGCCTCTCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CKKPGGCHAFFLIQVLKTPRTLI*FCLSLS Trigger: GGACAGTGAGAGGCAGAAGCAGATCAGCGTGCGTGG...GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TTAAGCTCACTCAGCTACGTGCAGGATTTCAGGGGCTCAGCTCCACTCCCTCCCCTTGAAGTCATTGGGTaGCTTGGCAGACCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSSLSYVQDFRGSAPLPPLEVIG*LGRPEP Trigger: AGGCTCTGGTCTGCCAAGGCACCCAATGACTTCAAG...GGGAGGGAGTGGAGCTGAGCCCCTGAAATCCTGCACGTAGCTGAGTGAGCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| 3UTR CAA 72 bp | TCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTaGACACCCACAGGGTTCCACAGATGGCTAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SSVLLSRGSGFY*TPTGFHRWLEA Trigger: TGCCTCTAGCCATCTGTGGAACCCTGTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATATTCACGATCTCAGAGTaGATCCTTGCCACCCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIFTISE*ILATPF Trigger: GAACGGGGTGGCAAGGATTCACTCTGAGATCGTGAA...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | GTAGCAGAGTGGAGTGTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCACATGGATGCAGGGTTaGTCTTCACCTTGTACTCCT | + |
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Preference number: 4 (lower is better) Translates to: VAEWSVHWTLCRASSLVVTWMQG*SSPCTP Trigger: AGGAGTACAAGGTGAAGATCAACCCTGCATCCATGT...GACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTACACTCCACTCTGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACACTTATACCCAGGCACTaGGGTGTCGTAGGGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTLIPRH*GVVGHS Trigger: GCTATGCCCTACGACACCCCAGTGCCTGGGTATAAG...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CTTCCTGGAAGCATGGCACTTCGGATAGCAGGGACCAGCGGCTGCTTGCAGTGCCGAAGAAATTGTCATTaGGATACAGGACCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSMALRIAGTSGCLQCRRNCH*DTGPWR Trigger: TCTCCAGGGTCCTGTATCCCAATGACAATTTCTTCG...GCACTGCAAGCAGCCGCTGGTCCCTGCTATCCGAAGTGCCATGCTTCCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTGCCCACCCCCAACCAGATAGAGCAGTGCAAGGTGGTGAAGCCTCTGGATGTCATTCAGCTGGATaGCTACCTTGTCTGGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: SPAHPQPDRAVQGGEASGCHSAG*LPCLGM Trigger: CATTCCCAGACAAGGTAGCCATCCAGCTGAATGACA...TCCAGAGGCTTCACCACCTTGCACTGCTCTATCTGGTTGGGGGTGGGCAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CTTCCTGGAAGCATGGCACTTCGGATAGCAGGGACCAGCGGCTGCTTGCAGTGCTGTCGCTTATATTCGTaGATCCTCTTCACGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSMALRIAGTSGCLQCCRLYS*ILFTCT Trigger: TGTGCACGTGAAGAGGATCCACGAATATAAGCGACA...GCACTGCAAGCAGCCGCTGGTCCCTGCTATCCGAAGTGCCATGCTTCCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACAACGCTGATCTGCTTCTaGCTCTCACTGTCCGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTTLICF*LSLSVN Trigger: GTTGACGGACAGTGAGAGGCAGAAGCAGATCAGCGT...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACAGCATTGTACCCTTTCTaGTCCAGGGCCTCGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTALYPF*SRASTS Trigger: AGATGTCGAGGCCCTGGACCAGAAAGGGTACAATGC...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTGAGCATGAAGCCTGAAGCAGTCGCGAACTGTGTGTaGCAGAGCGAAGAAGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTVKGKGQEAVSMKPEAVANCV*QSEEVV Trigger: GACTACTTCTTCGCTCTGGCACACACAGTTCGCGAC...TGCTTCAGGCTTCATGCTCACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGAAGCCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCTGGTATTCTGCAGCGTaGGGCCCATGTAGAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKKPGGCHAFFLIQVLKTWYSAA*GPCRIP Trigger: TGGAATTCTACATGGGCCGCACGCTGCAGAATACCA...GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCATTCCCATGGATGGCTACCTTGTCTaGGAATGTCTCGAAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGGCHAFFLIQVLKTIPMDGYLV*ECLETG Trigger: ACCTGTTTCGAGACATTCCCAGACAAGGTAGCCATC...CATGGGAATGGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CCA 90 bp | GTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCAGCAGCTTCTTCAGTTaGCTCAGATCGGTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSSVLLSRGSGFYLTPSSFFS*LRSVRK Trigger: TTTCCTGACCGATCTGAGCCAACTGAAGAAGCTGCT...GGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCATTCCCATGTGGGCACAAAGGCCTTaGCTGGATCCTTCTTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGCHAFFLIQVLKTIPMWAQRP*LDPSLF Trigger: GAATAAAGAAGGATCCAGCCAAGGCCTTTGTGCCCA...CATGGGAATGGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCACCCTGTCGCCCACAACTaGATCATGATTGACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLFSAPLQGFWVLLDTHPVAHN*IMIDNI Trigger: GATGTTGTCAATCATGATCCAGTTGTGGGCGACAGG...GTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR TCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATAAGAGCCTCATGGTGTTaGCTGTGTTGTTCTTATACC | + |
|
Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIRASWC*LCCSYT Trigger: GGTATAAGAACAACACAGTCAACACCATGAGGCTCT...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCCCAAGTGCCTCTGGTTaGTGGCATAGATTATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSSVLLSRGSGFYLTPPSASG*WHRLFP Trigger: TGGAAATAATCTATGCCATCAACCAGAGGCACTTGG...GGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTACAGGTGTGCCATGTTaGTTCTCTTGCAGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCTGVPC*FSCSPL Trigger: AAGGGGACTGCAAGAGAATCAACATGGCACACCTGT...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCTCACTCAGCTACGTGCAGGATTTCAGGGGCTCAGCTCCACTCCCTCCCAATCACACACAGGTGTaGCATGTTGATTCTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSLSYVQDFRGSAPLPPNHTQV*HVDSLA Trigger: TGCAAGAGAATCAACATGGCACACCTGTGTGTGATT...GGGAGGGAGTGGAGCTGAGCCCCTGAAATCCTGCACGTAGCTGAGTGAGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCGTTCTGGAACTTCTCTaGCTCCAGTTCGTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLSLFSAPLQGFWVLLDTVLELL*LQFVKV Trigger: GACTTTTACGAACTGGAGCCAGAGAAGTTCCAGAAC...GGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATACCATTTGTCTTGTTCTaGAACTTCTCTGGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIPFVLF*NFSGSS Trigger: ACTGGAGCCAGAGAAGTTCCAGAACAAGACAAATGG...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATACACAAAGGCCTTGGCTaGATCCTTCTTTATTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHWTLCRASSLVVSLAEIHKGLG*ILLYSV Trigger: AACCGAATAAAGAAGGATCCAGCCAAGGCCTTTGTG...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTCTCATCATCAACCAGTaGCAGCAGCTTCTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCLIINQ*QQLLQL Trigger: CAACTGAAGAAGCTGCTGTCACTGGTTGATGATGAG...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCACGTCCTTGAAGCAGTCTaGATCTTTGGGAGAAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLFSAPLQGFWVLLDTHVLEAV*IFGRKE Trigger: TTCTTTTCTCCCAAAGATCCAGACTGCTTCAAGGAC...GTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR GCA 90 bp | TACAAGGAGGTAATAGCAAGTAGTAGAAGGGTGGTCATGTATTGCGGCTTCAGGCTCTACAATGATTTCTaGCAGCCCCGGGTTACACAA | + |
|
Preference number: 4 (lower is better) Translates to: YKEVIASSRRVVMYCGFRLYNDF*QPRVTQ Trigger: TTGTGTAACCCGGGGCTGGCAGAAATCATTGTAGAG...CCTGAAGCCGCAATACATGACCACCCTTCTACTACTTGCTATTACCTCCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTCAAAACCATTCCCATGGTCCTTCCTGGAAGCATGGCACTTCGGATAGTAGGCTTCATAGTCTaGAAATACCTTGAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLKTIPMVLPGSMALRIVGFIV*KYLESV Trigger: GACAGATTCAAGGTATTTGCAGACTATGAAGCCTAC...TATCCGAAGTGCCATGCTTCCAGGAAGGACCATGGGAATGGTTTTGAGGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR GCA 90 bp | TACAAGGAGGTAATAGCAAGTAGTAGAAGGGTGGTCATGTATTGCGGCTTCAGGTCAGCTTCTTCAACCTaGCAGCCATTGACAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YKEVIASSRRVVMYCGFRSASST*QPLTIF Trigger: AAAGATTGTCAATGGCTGGCAGGTTGAAGAAGCTGA...CCTGAAGCCGCAATACATGACCACCCTTCTACTACTTGCTATTACCTCCTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR TCA 90 bp | TTCCTGTTGAAAAAGCAAAGAACTAAACCAACCCTCTATAAAATTGCCAGTCCTCGATTCTCTCTACAATaGTTTCTGCCAGCCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLKKQRTKPTLYKIASPRFSLQ*FLPAPG Trigger: ACCCGGGGCTGGCAGAAATCATTGTAGAGAGAATCG...AGGACTGGCAATTTTATAGAGGGTTGGTTTAGTTCTTTGCTTTTTCAACAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 90 bp | ATATCGGATTCCATAGCCGTATGCAGCCAGACCCAGGGTGGCCATTaGATCAAGGAAGCAGGCTGCCAGGCGCCCCAGGCCGCCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISDSIAVCSQTQGGH*IKEAGCQAPQAAIP Trigger: GGGAATGGCGGCCTGGGGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGAATCCGATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CCA 90 bp | CAAATTCATATCGGATTCCATAGCCGTATGCAGCCAGACCCAGGGTaGCCATTGAATCAAGGAAGCAGGCTGCCAGGCGCCCCAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QIHIGFHSRMQPDPG*PLNQGSRLPGAPGR Trigger: GCGGCCTGGGGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGAATCCGATATGAATTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGCAAATGCTCCCATGGTGGGGAAAGCGAGGGGTTCTCCTGCCCACCCCCAAGCAGTCTGGATCTTaGGGAGAAAAGAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SQQMLPWWGKRGVLLPTPKQSGS*GEKKPL Trigger: CAGTGGCTTCTTTTCTCCCAAAGATCCAGACTGCTT...GGGGGTGGGCAGGAGAACCCCTCGCTTTCCCCACCATGGGAGCATTTGCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | TCTCCTGCCCACCCCCAACCAGATAGAGCAGTGCAAGGTGGTGAAGCCTCTGGACACCTGGGCCTGGCATaGGATGTAGGCTTCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPAHPQPDRAVQGGEASGHLGLA*DVGFIV Trigger: GACTATGAAGCCTACATCCAATGCCAGGCCCAGGTG...TCCAGAGGCTTCACCACCTTGCACTGCTCTATCTGGTTGGGGGTGGGCAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATAGACCCAGGGTGGCCATaGAATCAAGGAAGCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VHWTLCRASSLVVSLAEIDPGWP*NQGSRL Trigger: CAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTC...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS GCA 90 bp | CCTTGCCACCCCGTTCACAGCGTGGGACCCAATCACACACAGGTGTaGCATGTTGATTCTCTTGCAGTCCCCTTCCTCAATCACGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PCHPVHSVGPNHTQV*HVDSLAVPFLNHGH Trigger: ATGTCCGTGATTGAGGAAGGGGACTGCAAGAGAATCAACATGGCACACCTGTGTGTGATTGGGTCCCACGCTGTGAACGGGGTGGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCCACGCCATGTTGATTCTCTaGCAGTCCCCTTCCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LSLFSAPLQGFWVLLDTHAMLIL*QSPSSI Trigger: GATTGAGGAAGGGGACTGCAAGAGAATCAACATGGC...GTGGGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | TCTCCTGCCCACCCCCAACCAGATAGAGCAGTGCAAGGTGGTGAAGCCTCTGGAATGGATGTGACCAGCTaGATGATCATCTTAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SPAHPQPDRAVQGGEASGMDVTS*MIILAM Trigger: CATGGCTAAGATGATCATCAAGCTGGTCACATCCAT...TCCAGAGGCTTCACCACCTTGCACTGCTCTATCTGGTTGGGGGTGGGCAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | GGTCTCTCTCTCTTCAGTGCTCCTCTCCAGGGGTTCTGGGTTCTACTTGACACCAACATGGATGCAGGGTaGATCTTCACCTTGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLSLFSAPLQGFWVLLDTNMDAG*IFTLYS Trigger: GGAGTACAAGGTGAAGATCAACCCTGCATCCATGTT...GGTGTCAAGTAGAACCCAGAACCCCTGGAGAGGAGCACTGAAGAGAGAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACATCGAAGAAATTGTCATaGGGATACAGGACCCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTSKKLS*GYRTLE Trigger: CTCCAGGGTCCTGTATCCCAATGACAATTTCTTCGA...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | TGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCAAAGGACAGGAAGCTGTAGCTGGATGGCTACCTaGTCTGGGAATGTCTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WVNHPHTQYSQGQRTGSCSWMAT*SGNVSK Trigger: TTTCGAGACATTCCCAGACAAGGTAGCCATCCAGCT...ACAGCTTCCTGTCCTTTGCCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS-3UTR CAA 90 bp | CTAGAGGCATGGCCTATATGGGTCAACCACCCACATACTCAGTACAGTCAAGGGCTGGGCACAAAGGCCTaGGCTGGATCCTTCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LEAWPIWVNHPHTQYSQGLGTKA*AGSFFI Trigger: AATAAAGAAGGATCCAGCCAAGGCCTTTGTGCCCAG...CCCTTGACTGTACTGAGTATGTGGGTGGTTGACCCATATAGGCCATGCCTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 90 bp | CTTAACCTTGGCTACGTCTCTGATGAAGGCCTCATCATCAACCAGTaGCAGCAGCTTCTTCAGTTGGCTCAGATCGGTCAGGAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLGYVSDEGLIINQ*QQLLQLAQIGQETF Trigger: GAAGGTTTCCTGACCGATCTGAGCCAACTGAAGAAGCTGCTGTCACTGGTTGATGATGAGGCCTTCATCAGAGACGTAGCCAAGGTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS CCA 90 bp | CTGATGAAGGCCTCATCATCAACCAGTGACAGCAGCTTCTTCAGTTaGCTCAGATCGGTCAGGAAACCTTCCCCGATTCTCTCTACAATG | + |
|
Preference number: 5 (lower is better) Translates to: LMKASSSTSDSSFFS*LRSVRKPSPILSTM Trigger: CATTGTAGAGAGAATCGGGGAAGGTTTCCTGACCGATCTGAGCCAACTGAAGAAGCTGCTGTCACTGGTTGATGATGAGGCCTTCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | TGTAAGAAGCCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCCAGAGCCTCATGGTGTaGACTGTGTTGTTCTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: CKKPGGCHAFFLIQVLKTQSLMV*TVLFLY Trigger: GTATAAGAACAACACAGTCAACACCATGAGGCTCTG...GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | CCCACCCCCACAAGCTACCACAGTGGCTCCGGTGATTTAAGTCCTGAAAAGACAGCAGAGAACTTCAGCTaGTTTTCCTGCTTAACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPTSYHSGSGDLSPEKTAENFS*FSCLTL Trigger: CAAGGTTAAGCAGGAAAACAAGCTGAAGTTCTCTGC...TGTCTTTTCAGGACTTAAATCACCGGAGCCACTGTGGTAGCTTGTGGGGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | GTACACTGGACCCTCTGCAGGGCCAGCAGCTTAGTCGTCAGCCTAGCAGAAATAATAATGTGTAGGCAGTaGAGCAGCTGTCGCTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: VHWTLCRASSLVVSLAEIIMCRQ*SSCRLY Trigger: ATATAAGCGACAGCTGCTCAACTGCCTACACATTAT...TATTTCTGCTAGGCTGACGACTAAGCTGCTGGCCCTGCAGAGGGTCCAGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | TGTAAGAAGCCAGGAGGATGCCACGCCTTCTTCCTCATCCAGGTCCTCAAAACCATGTTAACCACGTCCTaGAAGCAGTCTGGATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKKPGGCHAFFLIQVLKTMLTTS*KQSGSL Trigger: CAAAGATCCAGACTGCTTCAAGGACGTGGTTAACAT...GGTTTTGAGGACCTGGATGAGGAAGAAGGCGTGGCATCCTCCTGGCTTCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | TACAAGGAGGTAATAGCAAGTAGTAGAAGGGTGGTCATGTATTGCGGCTTCAGGTTGAAGTCCTTCAGCTaGAAGTCATTGGGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YKEVIASSRRVVMYCGFRLKSFS*KSLGAL Trigger: CAAGGCACCCAATGACTTCAAGCTGAAGGACTTCAA...CCTGAAGCCGCAATACATGACCACCCTTCTACTACTTGCTATTACCTCCTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTGTTGAAAAAGCAAAGAACTAAACCAACCCTCTATAAAATTGCCAGTCCTCACAGGTGTGCCATGTaGATTCTCTTGCAGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLKKQRTKPTLYKIASPHRCAM*ILLQSP Trigger: AGGGGACTGCAAGAGAATCAACATGGCACACCTGTG...AGGACTGGCAATTTTATAGAGGGTTGGTTTAGTTCTTTGCTTTTTCAACAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS TCA 72 bp | CGGCCACGTCGCCCAGCCCCGCGATGCCACGCACGCTaGTCTGCTTCTGCCTCTCACTGTCCGTCAACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPRRPAPRCHAR*SASASHCPSTA Trigger: AGCCGTTGACGGACAGTGAGAGGCAGAAGCAGATCAGCGTGCGTGGCATCGCGGGGCTGGGCGACGTGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
||
| CDS GCA 72 bp | ACGTCGCCCAGCCCCGCGATGCCACGCACGCTGATCTaGTTCTGCCTCTCACTGTCCGTCAACGGCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: TSPSPAMPRTLI*FCLSLSVNGFA Trigger: GGCGAAGCCGTTGACGGACAGTGAGAGGCAGAAGCAGATCAGCGTGCGTGGCATCGCGGGGCTGGGCGACGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 72 bp | TCCATAGCCGTATGCAGCCAGACCCAGGGTGGCCATTaGATCAAGGAAGCAGGCTGCCAGGCGCCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SIAVCSQTQGGH*IKEAGCQAPQA Trigger: GGCCTGGGGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CAA 72 bp | TTCCATAGCCGTATGCAGCCAGACCCAGGGTGGCCATaGAATCAAGGAAGCAGGCTGCCAGGCGCCCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: FHSRMQPDPGWP*NQGSRLPGAPG Trigger: GCCTGGGGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CAA 90 bp | CATATCGGATTCCATAGCCGTATGCAGCCAGACCCAGGGTGGCCATaGAATCAAGGAAGCAGGCTGCCAGGCGCCCCAGGCCGCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: HIGFHSRMQPDPGWP*NQGSRLPGAPGRHS Trigger: GGAATGGCGGCCTGGGGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGAATCCGATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CCA 72 bp | ATCGGATTCCATAGCCGTATGCAGCCAGACCCAGGGTaGCCATTGAATCAAGGAAGCAGGCTGCCAGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: IGFHSRMQPDPG*PLNQGSRLPGA Trigger: GGCGCCTGGCAGCCTGCTTCCTTGATTCAATGGCCACCCTGGGTCTGGCTGCATACGGCTATGGAATCCGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 72 bp | GAAACAGGGCAGCCACGTGGTCCAAGTGCCTCTGGTTaGTGGCATAGATTATTTCCAGGTGCCGCGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: ETGQPRGPSASG*WHRLFPGAAEA Trigger: TGCTTCCGCGGCACCTGGAAATAATCTATGCCATCAACCAGAGGCACTTGGACCACGTGGCTGCCCTGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS GCA 72 bp | CAGGAAACCTTCCCCGATTCTCTCTACAATGATTTCTaGCAGCCCCGGGTTACACAACAGCAGCCACCGTCG | + |
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Preference number: 6 (lower is better) Translates to: QETFPDSLYNDF*QPRVTQQQPPS Trigger: CGACGGTGGCTGCTGTTGTGTAACCCGGGGCTGGCAGAAATCATTGTAGAGAGAATCGGGGAAGGTTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 72 bp | CAGCGTGGGACCCAATCACACACAGGTGTGCCATGTTaGTTCTCTTGCAGTCCCCTTCCTCAATCACGGACA | + |
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Preference number: 6 (lower is better) Translates to: QRGTQSHTGVPC*FSCSPLPQSRT Trigger: TGTCCGTGATTGAGGAAGGGGACTGCAAGAGAATCAACATGGCACACCTGTGTGTGATTGGGTCCCACGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS GCA 72 bp | AAAGACAGACTGCTTCACGATCTCAGAGTGAATCCTTaGCACCCCGTTCACAGCGTGGGACCCAATCACACA | + |
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Preference number: 6 (lower is better) Translates to: KDRLLHDLRVNP*HPVHSVGPNHT Trigger: TGTGTGATTGGGTCCCACGCTGTGAACGGGGTGGCAAGGATTCACTCTGAGATCGTGAAGCAGTCTGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CCA 72 bp | GCCTCATCATCAACCAGTGACAGCAGCTTCTTCAGTTaGCTCAGATCGGTCAGGAAACCTTCCCCGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: ASSSTSDSSFFS*LRSVRKPSPIL Trigger: GAGAATCGGGGAAGGTTTCCTGACCGATCTGAGCCAACTGAAGAAGCTGCTGTCACTGGTTGATGATGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CAA 90 bp | GGAGCTGCCTTGCCCCCAATCATAACAGTCCTGGGCACAAAGGCCTaGGCTGGATCCTTCTTTATTCGGTTGTACAGGGTGATAATGTGT | + |
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Preference number: 6 (lower is better) Translates to: GAALPPIITVLGTKA*AGSFFIRLYRVIMC Trigger: ACACATTATCACCCTGTACAACCGAATAAAGAAGGATCCAGCCAAGGCCTTTGTGCCCAGGACTGTTATGATTGGGGGCAAGGCAGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CAA 72 bp | TTGCCCCCAATCATAACAGTCCTGGGCACAAAGGCCTaGGCTGGATCCTTCTTTATTCGGTTGTACAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPPIITVLGTKA*AGSFFIRLYRV Trigger: CACCCTGTACAACCGAATAAAGAAGGATCCAGCCAAGGCCTTTGTGCCCAGGACTGTTATGATTGGGGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CAA 90 bp | TTCTCTAGCTGGGCAGAGAACTTCAGCTTGTTTTCCTGCTTAACCTaGGCTACGTCTCTGATGAAGGCCTCATCATCAACCAGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: FSSWAENFSLFSCLT*ATSLMKASSSTSDS Trigger: GCTGTCACTGGTTGATGATGAGGCCTTCATCAGAGACGTAGCCAAGGTTAAGCAGGAAAACAAGCTGAAGTTCTCTGCCCAGCTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS TCA 72 bp | AAGATCACTCTGAGCCTGTCGCCCACAACTGGATCATaGTTGACAACATCTCCAATGGATGTGACCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: KITLSLSPTTGS*LTTSPMDVTSL Trigger: CAAGCTGGTCACATCCATTGGAGATGTTGTCAATCATGATCCAGTTGTGGGCGACAGGCTCAGAGTGATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS GCA 72 bp | CACCTGGGCCTGGCATTGGATGTAGGCTTCATAGTCTaGAAATACCTTGAATCTGTCGTGGTACATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HLGLALDVGFIV*KYLESVVVHQH Trigger: ATGCTGATGTACCACGACAGATTCAAGGTATTTGCAGACTATGAAGCCTACATCCAATGCCAGGCCCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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| CDS CCA 72 bp | CCCAATCATAACAGTCCTGGGCACAAAGGCCTTGGCTaGATCCTTCTTTATTCGGTTGTACAGGGTGATAAT | + |
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Preference number: 6 (lower is better) Translates to: PNHNSPGHKGLG*ILLYSVVQGDN Trigger: ATTATCACCCTGTACAACCGAATAAAGAAGGATCCAGCCAAGGCCTTTGTGCCCAGGACTGTTATGATTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045441.8 |
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