Pregenerated sensors for PYCRL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022571Ensembl transcript IDs: ENSMUST00000053918.9
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCTCCTGTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTaGAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCGATTC | + |
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Preference number: 1 (lower is better) Translates to: PAPVTMRTQLQLARR*RREDLESQVRGKRF Trigger: GAATCGCTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCACAGGAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| 3UTR-3UTR GCA 90 bp | GACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTTCTCACCACAGAGGCTaGAGCTGGGCAAGGAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: DTTATGQEVQKGGSGISGSHHRG*SWARSP Trigger: CGGGCTCCTTGCCCAGCTGCAGCCTCTGTGGTGAGA...ACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| 3UTR GCA 72 bp | GTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTaGAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VTMRTQLQLARR*RREDLESQVRG Trigger: GCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| 3UTR TCA 72 bp | GAATCTCAGGTAAGGGGCAAGCGATTCTTCCTTGACTaGATGTCACAGTCAAGGCAACCCCGTCTTGATAGC | + |
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Preference number: 3 (lower is better) Translates to: ESQVRGKRFFLD*MSQSRQPRLDS Trigger: GCTATCAAGACGGGGTTGCCTTGACTGTGACATTCAGTCAAGGAAGAATCGCTTGCCCCTTACCTGAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | ACTGCCCACTACATCTCCCGTCCAGGGCTATTCTCACCACAGAGGCTGCAGCTGCTCCGCCATGCGGCCTaGACCCACGAAGCCCACACG | + |
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Preference number: 4 (lower is better) Translates to: TAHYISRPGLFSPQRLQLLRHAA*THEAHT Trigger: CGTGTGGGCTTCGTGGGTGCAGGCCGCATGGCGGAG...CAGCTGCAGCCTCTGTGGTGAGAATAGCCCTGGACGGGAGATGTAGTGGGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | GTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGTCCCCAGCAGGGTCTaGGCAGCAATGCGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VTMRTQLQLARRCRREDLVPSRV*AAMRWA Trigger: GGCCCACCGCATTGCTGCTCAGACCCTGCTGGGGAC...CAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | GTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGCAATGGCCTCCGCCATaGGGCCTGCACCCACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VTMRTQLQLARRCRREDLQWPPP*GLHPRS Trigger: GCTTCGTGGGTGCAGGCCGCATGGCGGAGGCCATTG...CAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCGAGGCAACCCAGAGCCCTaGAGTGGCAGAGGTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LARRCRREDLESQVRGKRGNPEP*SGRGCC Trigger: ACAACAACCTCTGCCACTTCAGGGCTCTGGGTTGCC...TCGCTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | ACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCGCCCCGCTCTAGGGCATaGAACCCATGGATGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TGQEVQKGGSGISGKGQAPRSRA*NPWMVV Trigger: AACCACCATCCATGGGTTGCATGCCCTAGAGCGGGG...CGCTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CCA 90 bp | CAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCCTGCTGCAGCATCTTaGCTGTCCCCAGCAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QLARRCRREDLESQVRGKPAAAS*LSPAGS Trigger: AGACCCTGCTGGGGACAGCCAAGATGCTGCAGCAGG...CTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | ACTGCCCACTACATCTCCCGTCCAGGGCTATTCTCACCACAGAGGCTGCAGCTGCCACACCACTGCCACTaGGACCGGTGTGGATATCTA | + |
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Preference number: 4 (lower is better) Translates to: TAHYISRPGLFSPQRLQLPHHCH*DRCGYL Trigger: TAGATATCCACACCGGTCTCAGTGGCAGTGGTGTGG...CAGCTGCAGCCTCTGTGGTGAGAATAGCCCTGGACGGGAGATGTAGTGGGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | ACTGCCCACTACATCTCCCGTCCAGGGCTATTCTCACCACAGAGGCTGCAGCTGACCTCATGGTTGGAGTaGGTAGTCTGGCAACCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TAHYISRPGLFSPQRLQLTSWLE*VVWQPR Trigger: TCTGGGTTGCCAGACTACTCACTCCAACCATGAGGT...CAGCTGCAGCCTCTGTGGTGAGAATAGCCCTGGACGGGAGATGTAGTGGGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | TGTCTACCACCTCCACAGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACCGAAGCTGGGCTGGGTaGTTCCCTTCCTGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLPPPQETYSTSSCDHEDRSWAG*FPSCCS Trigger: GCTGCAGCAGGAAGGGAAGCACCCAGCCCAGCTTCG...GTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCTGTGGAGGTGGTAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CCA 90 bp | TCCTGTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGAAGGGCATGCAACCCATaGATGGTGGTTCCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SCDHEDTTATGQEVQKGGRACNP*MVVPAG Trigger: ACCAGCTGGAACCACCATCCATGGGTTGCATGCCCT...TCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | TGTCTACCACCTCCACAGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACCTTTGCCTGCTTGGATaGGGCCTCGGGCAATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CLPPPQETYSTSSCDHEDLCLLG*GLGQWP Trigger: AGGCCATTGCCCGAGGCCTCATCCAAGCAGGCAAAG...GTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCTGTGGAGGTGGTAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CCA 90 bp | GACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTGAGGTTGTTGTCCGTTaGTGCACTGGCCAGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: DTTATGQEVQKGGSGISGEVVVR*CTGQHL Trigger: CAAGTGCTGGCCAGTGCACCAACGGACAACAACCTC...ACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | TCCTGTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGAGTTGTTGTCCGTTGGTaGACTGGCCAGCACTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: SCDHEDTTATGQEVQKGGVVVRW*TGQHLF Trigger: AAACAAGTGCTGGCCAGTGCACCAACGGACAACAAC...TCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | GTGACCATGAGGACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGACAAGTGGGCAGTTTTaGAGCACCTCATGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VTMRTQLQLARRCRREDLTSGQF*STSWLE Trigger: CTCCAACCATGAGGTGCTGCAAAACTGCCCACTTGT...CAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTCCTCATGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | ACTGCCCACTACATCTCCCGTCCAGGGCTATTCTCACCACAGAGGCTGCAGCTGACAGATACGATGATGTaGTCAGTGGTGACTATGGGG | + |
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Preference number: 4 (lower is better) Translates to: TAHYISRPGLFSPQRLQLTDTMM*SVVTMG Trigger: CCCCATAGTCACCACTGAGCACATCATCGTATCTGT...CAGCTGCAGCCTCTGTGGTGAGAATAGCCCTGGACGGGAGATGTAGTGGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CCA 90 bp | CAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCAACGCAGGGTAGATTaGGAGAGACTCGCAATACTC | + |
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Preference number: 4 (lower is better) Translates to: QLARRCRREDLESQVRGKQRRVD*ERLAIL Trigger: GAGTATTGCGAGTCTCTCCCAATCTACCCTGCGTTG...CTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | CCTCCACAGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACACAACTGCAAGCTTCTACTTTGCCTaGTTGGATGAGGCCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPQETYSTSSCDHEDTTASFYFA*LDEASG Trigger: GCCCGAGGCCTCATCCAAGCAGGCAAAGTAGAAGCT...TGCAGTTGTGTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCTGTGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR GCA 90 bp | AGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACACAACTGCAACTGGCCGGAACCTCTATGCACTaGCCACAGGCTTCCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: RRHILPAPVTMRTQLQLAGTSMH*PQASSK Trigger: CTTGCTGGAAGCCTGTGGGCAGTGCATAGAGGTTCC...GGCCAGTTGCAGTTGTGTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR TCA 90 bp | CCTCCACAGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACACAACTGCATTCAGCCAGGGCCTCTaGAAATGTACACACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPQETYSTSSCDHEDTTAFSQGL*KCTHKG Trigger: GCCTTTGTGTGTACATTTTCAGAGGCCCTGGCTGAA...TGCAGTTGTGTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCTGTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS GCA 90 bp | GCCTGCTTGGATGAGGCCTCGGGCAATGGCCTCCGCCATGCGGCCTaGACCCACGAAGCCCACACGCCGAGGTTCAGACATTGTCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: ACLDEASGNGLRHAA*THEAHTPRFRHCRR Trigger: GCGGCGACAATGTCTGAACCTCGGCGTGTGGGCTTCGTGGGTGCAGGCCGCATGGCGGAGGCCATTGCCCGAGGCCTCATCCAAGCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS TCA 90 bp | CCCGCTCTAGGGCATGCAACCCATGGATGGTGGTTCCAGCTGGTGTaGGCACATCTGTCCGAAGCTGGGCTGGGTGCTTCCCTTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PALGHATHGWWFQLV*AHLSEAGLGASLPA Trigger: AGCAGGAAGGGAAGCACCCAGCCCAGCTTCGGACAGATGTGCTCACACCAGCTGGAACCACCATCCATGGGTTGCATGCCCTAGAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 90 bp | ATGGTAGCCGCTCGAAAACCGCCCCGCTCTAGGGCATGCAACCCATaGATGGTGGTTCCAGCTGGTGTGAGCACATCTGTCCGAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MVAARKPPRSRACNP*MVVPAGVSTSVRSW Trigger: CCAGCTTCGGACAGATGTGCTCACACCAGCTGGAACCACCATCCATGGGTTGCATGCCCTAGAGCGGGGCGGTTTTCGAGCGGCTACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CAA 90 bp | CAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGAAGTGGCAGAGGTTGTaGTCCGTTGGTGCACTGGCC | + |
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Preference number: 5 (lower is better) Translates to: QLARRCRREDLESQVRGKKWQRL*SVGALA Trigger: GGCCAGTGCACCAACGGACAACAACCTCTGCCACTT...CTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CAA 90 bp | GACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTCTGGGCATGCCCATTTaGATGGCACCTTCAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DTTATGQEVQKGGSGISGLGMPI*MAPSAR Trigger: CCTGGCTGAAGGTGCCATCAAAATGGGCATGCCCAG...ACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CAA 90 bp | ACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAAGGGGCAAGCGTGCACTGGCCAGCACTaGTTTAGCTTCTACTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: TGQEVQKGGSGISGKGQACTGQH*FSFYFA Trigger: GGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCA...CGCTTGCCCCTTACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CAA 90 bp | GACACAACTGCAACTGGCCAGGAGGTGCAGAAGGGAGGATCTGGAATCTCAGGTAGAGGTTGTTGTCCGTaGGTGCACTGGCCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: DTTATGQEVQKGGSGISGRGCCP*VHWPAL Trigger: AAGTGCTGGCCAGTGCACCAACGGACAACAACCTCT...ACCTGAGATTCCAGATCCTCCCTTCTGCACCTCCTGGCCAGTTGCAGTTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 90 bp | AGTCTGGCAACCCAGAGCCCTGAAGTGGCAGAGGTTGTTGTCCGTTaGTGCACTGGCCAGCACTTGTTTAGCTTCTACTTTGCCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLATQSPEVAEVVVR*CTGQHLFSFYFACL Trigger: CAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAACCTCTGCCACTTCAGGGCTCTGGGTTGCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS TCA 90 bp | GCAAAGATGACAAGTGGGCAGTTTTGCAGCACCTCATGGTTGGAGTaGGTAGTCTGGCAACCCAGAGCCCTGAAGTGGCAGAGGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: AKMTSGQFCSTSWLE*VVWQPRALKWQRLL Trigger: CAACAACCTCTGCCACTTCAGGGCTCTGGGTTGCCAGACTACTCACTCCAACCATGAGGTGCTGCAAAACTGCCCACTTGTCATCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 90 bp | CAGGACAGTTGGCAGGACTTGGGGTTTGGTGGCAAAGATGACAAGTaGGCAGTTTTGCAGCACCTCATGGTTGGAGTGAGTAGTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QDSWQDLGFGGKDDK*AVLQHLMVGVSSLA Trigger: TGCCAGACTACTCACTCCAACCATGAGGTGCTGCAAAACTGCCCACTTGTCATCTTTGCCACCAAACCCCAAGTCCTGCCAACTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS-3UTR CAA 90 bp | CCTCCACAGGAGACATATTCTACCAGCTCCTGTGACCATGAGGACACAACTGCACTGAAGTGGCAGAGGTaGTTGTCCGTTGGTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: PPQETYSTSSCDHEDTTALKWQR*LSVGAL Trigger: CAGTGCACCAACGGACAACAACCTCTGCCACTTCAG...TGCAGTTGTGTCCTCATGGTCACAGGAGCTGGTAGAATATGTCTCCTGTGGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS GCA 72 bp | GATGAGGCCTCGGGCAATGGCCTCCGCCATGCGGCCTaGACCCACGAAGCCCACACGCCGAGGTTCAGACAT | + |
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Preference number: 6 (lower is better) Translates to: DEASGNGLRHAA*THEAHTPRFRH Trigger: ATGTCTGAACCTCGGCGTGTGGGCTTCGTGGGTGCAGGCCGCATGGCGGAGGCCATTGCCCGAGGCCTCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS TCA 72 bp | GGGCATGCAACCCATGGATGGTGGTTCCAGCTGGTGTaGGCACATCTGTCCGAAGCTGGGCTGGGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GHATHGWWFQLV*AHLSEAGLGAS Trigger: GGAAGCACCCAGCCCAGCTTCGGACAGATGTGCTCACACCAGCTGGAACCACCATCCATGGGTTGCATGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 72 bp | CTGGCCAGCACTTGTTTAGCTTCTACTTTGCCTGCTTaGATGAGGCCTCGGGCAATGGCCTCCGCCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LASTCLASTLPA*MRPRAMASAMR Trigger: CCGCATGGCGGAGGCCATTGCCCGAGGCCTCATCCAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 72 bp | GTGGTTCCAGCTGGTGTGAGCACATCTGTCCGAAGCTaGGCTGGGTGCTTCCCTTCCTGCTGCAGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: VVPAGVSTSVRS*AGCFPSCCSIL Trigger: CAAGATGCTGCAGCAGGAAGGGAAGCACCCAGCCCAGCTTCGGACAGATGTGCTCACACCAGCTGGAACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 72 bp | GCTCGAAAACCGCCCCGCTCTAGGGCATGCAACCCATaGATGGTGGTTCCAGCTGGTGTGAGCACATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ARKPPRSRACNP*MVVPAGVSTSV Trigger: GACAGATGTGCTCACACCAGCTGGAACCACCATCCATGGGTTGCATGCCCTAGAGCGGGGCGGTTTTCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 72 bp | TCACCATGGCCCCCTCCTGGACAACGCAGGGTAGATTaGGAGAGACTCGCAATACTCGTGTGTTCGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SPWPPPGQRRVD*ERLAILVCSGV Trigger: TACCCCCGAACACACGAGTATTGCGAGTCTCTCCCAATCTACCCTGCGTTGTCCAGGAGGGGGCCATGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | ATCACCATGGCCCCCTCCTGGACAACGCAGGGTAGATaGGGAGAGACTCGCAATACTCGTGTGTTCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ITMAPSWTTQGR*GETRNTRVFGG Trigger: ACCCCCGAACACACGAGTATTGCGAGTCTCTCCCAATCTACCCTGCGTTGTCCAGGAGGGGGCCATGGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | GCAATGCGGTGGGCCAGGCCACTGGGCATGCCCATTTaGATGGCACCTTCAGCCAGGGCCTCTGAAAATGTA | + |
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Preference number: 6 (lower is better) Translates to: AMRWARPLGMPI*MAPSARASENV Trigger: TACATTTTCAGAGGCCCTGGCTGAAGGTGCCATCAAAATGGGCATGCCCAGTGGCCTGGCCCACCGCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS GCA 72 bp | TTACTTCTTGCTGAGCTCCTTAGCCCGGCAGGTAGCTaGTTCCACCGCACTCATGGTAGCCGCTCGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LLLAELLSPAGS*FHRTHGSRSKT Trigger: GGTTTTCGAGCGGCTACCATGAGTGCGGTGGAAGCAGCTACCTGCCGGGCTAAGGAGCTCAGCAAGAAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | GTTGGTGCACTGGCCAGCACTTGTTTAGCTTCTACTTaGCCTGCTTGGATGAGGCCTCGGGCAATGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VGALASTCLAST*PAWMRPRAMAS Trigger: GGAGGCCATTGCCCGAGGCCTCATCCAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | GCAATACTCGTGTGTTCGGGGGTAACAGCCCCTCCATaGTGCTCAGAGAGATCCCAGCAGCCACAGATACGA | + |
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Preference number: 6 (lower is better) Translates to: AILVCSGVTAPP*CSERSQQPQIR Trigger: TCGTATCTGTGGCTGCTGGGATCTCTCTGAGCACAATGGAGGGGCTGTTACCCCCGAACACACGAGTATTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 90 bp | CCTGAAGTGGCAGAGGTTGTTGTCCGTTGGTGCACTGGCCAGCACTaGTTTAGCTTCTACTTTGCCTGCTTGGATGAGGCCTCGGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PEVAEVVVRWCTGQH*FSFYFACLDEASGN Trigger: ATTGCCCGAGGCCTCATCCAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAACCTCTGCCACTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 90 bp | TGGCAGGACTTGGGGTTTGGTGGCAAAGATGACAAGTGGGCAGTTTaGCAGCACCTCATGGTTGGAGTGAGTAGTCTGGCAACCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: WQDLGFGGKDDKWAV*QHLMVGVSSLATQS Trigger: GCTCTGGGTTGCCAGACTACTCACTCCAACCATGAGGTGCTGCAAAACTGCCCACTTGTCATCTTTGCCACCAAACCCCAAGTCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS TCA 72 bp | GGACAGTTGGCAGGACTTGGGGTTTGGTGGCAAAGATaGCAAGTGGGCAGTTTTGCAGCACCTCATGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GQLAGLGVWWQR*QVGSFAAPHGW Trigger: CCAACCATGAGGTGCTGCAAAACTGCCCACTTGTCATCTTTGCCACCAAACCCCAAGTCCTGCCAACTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS GCA 72 bp | CAGAGCCCTGAAGTGGCAGAGGTTGTTGTCCGTTGGTaGACTGGCCAGCACTTGTTTAGCTTCTACTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: QSPEVAEVVVRW*TGQHLFSFYFA Trigger: GGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAACCTCTGCCACTTCAGGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | GCAGAGGTTGTTGTCCGTTGGTGCACTGGCCAGCACTaGTTTAGCTTCTACTTTGCCTGCTTGGATGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AEVVVRWCTGQH*FSFYFACLDEA Trigger: GGCCTCATCCAAGCAGGCAAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAACCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CCA 72 bp | ACCCAGAGCCCTGAAGTGGCAGAGGTTGTTGTCCGTTaGTGCACTGGCCAGCACTTGTTTAGCTTCTACTTT | + |
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Preference number: 6 (lower is better) Translates to: TQSPEVAEVVVR*CTGQHLFSFYF Trigger: AAAGTAGAAGCTAAACAAGTGCTGGCCAGTGCACCAACGGACAACAACCTCTGCCACTTCAGGGCTCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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| CDS CAA 72 bp | TTGGGGTTTGGTGGCAAAGATGACAAGTGGGCAGTTTaGCAGCACCTCATGGTTGGAGTGAGTAGTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LGFGGKDDKWAV*QHLMVGVSSLA Trigger: TGCCAGACTACTCACTCCAACCATGAGGTGCTGCAAAACTGCCCACTTGTCATCTTTGCCACCAAACCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053918.9 |
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