Pregenerated sensors for PYCR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025140Ensembl transcript IDs: ENSMUST00000026133.15, ENSMUST00000139706.2, ENSMUST00000141254.8, ENSMUST00000151876.8, ENSMUST00000170556.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTAGGGAGAGTAAAGACCCCACAGGCCTGAGCTCCAGAGGATGCTaGAGAGGGGGAGGTCTGAGAAGCCACCTAGTGTCTAGCTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: TRESKDPTGLSSRGC*RGGGLRSHLVSSWH Trigger: GTGCCAGCTAGACACTAGGTGGCTTCTCAGACCTCCCCCTCTTCAGCATCCTCTGGAGCTCAGGCCTGTGGGGTCTTTACTCTCCCTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR TCA 90 bp | AAGGGTGAGTATAGCACTGGGCTATGGAGACATCACCCACTGTGGTaGCCTGGCAGGACATTCAGAGTCACATCAGGACTTGTCCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: KGEYSTGLWRHHPLW*PGRTFRVTSGLVLS Trigger: AGAAAGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCATAGCCCAGTGCTATACTCACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR GCA 90 bp | AGTCTCTCAGGTGTTGTGTACCTAACGGGAATTGAAATCAGAGTATaGCCTGAGCCTGTAAGTTCAAGTCTTGTCTGGGCAACATCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLSGVVYLTGIEIRV*PEPVSSSLVWATSS Trigger: ACTTGATGTTGCCCAGACAAGACTTGAACTTACAGGCTCAGGGCATACTCTGATTTCAATTCCCGTTAGGTACACAACACCTGAGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR CCA 90 bp | ATTGAAATCAGAGTATGCCCTGAGCCTGTAAGTTCAAGTCTTGTCTaGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: IEIRVCPEPVSSSLV*ATSSHYLRLKDRRG Trigger: TCCTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCAGACAAGACTTGAACTTACAGGCTCAGGGCATACTCTGATTTCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR TCA 90 bp | AGCAGAGCCCATAAAGCAGCAAAGCACAGCTACACCCGCCTTACATCCTGGTCCCTTCCCAGGGATAGCTaGGGTCCTCCACCTGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SRAHKAAKHSYTRLTSWSLPRDS*GPPPAG Trigger: CCCAGCAGGTGGAGGACCTCAGCTATCCCTGGGAAG...GGACCAGGATGTAAGGCGGGTGTAGCTGTGCTTTGCTGCTTTATGGGCTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGTGGAGCTGCTTCCATGCTGTACAGAGCCCTGGGCTCTGGGGTTAATCAGGTGGCTCAGGCTCTaGAGTCTTCCCAGGGATAGC | + |
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Preference number: 2 (lower is better) Translates to: AGVELLPCCTEPWALGLIRWLRL*SLPRDS Trigger: GCTATCCCTGGGAAGACTCCAGAGCCTGAGCCACCT...GATTAACCCCAGAGCCCAGGGCTCTGTACAGCATGGAAGCAGCTCCACACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTTGCTGACCTGGCTGTaGGCAAGGGCCTGCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: QFGELGKMQESCQLPEKFLLTWL*ARACYG Trigger: CCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGCAA...GAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCTATCTTCATCACTTGGTGGTAGTCCAAGGGAGGACGTCTGAGCCACTTAGGAAGCACCAGCCGTaGGTCCCGGGGGCAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: VLYLHHLVVVQGRTSEPLRKHQP*VPGAAT Trigger: AGTAGCTGCCCCCGGGACCCACGGCTGGTGCTTCCT...AAGTGGCTCAGACGTCCTCCCTTGGACTACCACCAAGTGATGAAGATAGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGTACACGATGTCTTGGGCCAGCTGGTCATCACAGAAAGGGAGAGGCCACTGTGGGCAAGGGCCTaGTATGGGGATATTCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KEVHDVLGQLVITERERPLWARA*YGDIRC Trigger: ACACCGAATATCCCCATAGCAGGCCCTTGCCCACAG...TGGCCTCTCCCTTTCTGTGATGACCAGCTGGCCCAAGACATCGTGTACCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTAAGACCCCACAGGCCTaGGCTCCAGAGGATGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSKTPQA*APEDAE Trigger: TTCAGCATCCTCTGGAGCTCAGGCCTGTGGGGTCTT...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAAGCAGAGCCCATAAAGCAGCAAAGCACAGCTACACCCGCCTTACATCCTGCTGTACAGAGCCCTaGGCTCTGGGGTTAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: EESRAHKAAKHSYTRLTSCCTEP*ALGLIL Trigger: CAGGATTAACCCCAGAGCCCAGGGCTCTGTACAGCA...GGATGTAAGGCGGGTGTAGCTGTGCTTTGCTGCTTTATGGGCTCTGCTTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR CAA 90 bp | GCTGACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTaGTTTGAGAGCGTTGGGACAGAAGCTTCAAGCAAGAAAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ADLAVGKGLLWGYSV*FESVGTEASSKKRR Trigger: TCTTCTTTTCTTGCTTGAAGCTTCTGTCCCAACGCTCTCAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTTTTCCCCAGTGCCTGTTAACACTTATCCATaGTCCCAGCACTTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: GKMQESCQLPEKFFSPVPVNTYP*SQHLGH Trigger: GTGTCCCAAGTGCTGGGATCATGGATAAGTGTTAAC...AGGCACTGGGGAAAAGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGTGCTCTACAGGGGTGTaGTTTTGCCAGCTACAGATA | + |
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Preference number: 2 (lower is better) Translates to: METSPTVVTWQDIQSHIRCSTGV*FCQLQI Trigger: TATCTGTAGCTGGCAAAATCACACCCCTGTAGAGCA...CCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATAGCAAAGTTTTAGACTaGACACACCCAGGGCCACAA | + |
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Preference number: 2 (lower is better) Translates to: GYGDITHCGDLAGHSESHSKVLD*THPGPQ Trigger: TTGTGGCCCTGGGTGTGTGCAGTCTAAAACTTTGCT...ATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCATAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR CAA 90 bp | ACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTaGAGAGCGTTGGGACAGAAGCTTCAAGCAAGAAAAGAAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: TWLWARACYGDIRCC*RALGQKLQARKEER Trigger: TCTTTCTTCTTTTCTTGCTTGAAGCTTCTGTCCCAACGCTCTCAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR CAA 90 bp | ACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGACTaGTCCTTTCTCATGCTCTTCCTTACCACCTGCTCAAGTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: THCGDLAGHSESHQD*SFLMLFLTTCSSVI Trigger: AATGACACTTGAGCAGGTGGTAAGGAAGAGCATGAGAAAGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCAACCCTCAACACACATACACCAGGAGATATTAAGTCAGAGGCCCAGTGCATGGTCCTCACAGCACTaGGAGATAATTTGTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: AQPSTHIHQEILSQRPSAWSSQH*EIICES Trigger: TGACTCACAAATTATCTCTCAGTGCTGTGAGGACCA...TGCACTGGGCCTCTGACTTAATATCTCCTGGTGTATGTGTGTTGAGGGTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATCTCAAGTGTCATTCCAGGAGGTaGCTCAGGCTCTGGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KQIQFQNSKGYTEKPYLKCHSRR*LRLWSL Trigger: AAGACTCCAGAGCCTGAGCCACCTCCTGGAATGACA...CTTGAGATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAACAAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATTTGGTGTTAAGGGGTTaGAAGGGGTGGAGAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TNKQIQFQNSKGYTEKPYLVLRG*KGWRRV Trigger: CACCCTTCTCCACCCCTTTCAACCCCTTAACACCAA...ATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTGTCTGGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGATACACTGCAAAACCCTaGTGGAGAGGAGAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLVWATSSHYLRLKDRRGYTAKP*WRGEER Trigger: CCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGTGTA...TCCTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCAGACAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR GCA 90 bp | AAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATCTCAAGGGTGAAGATCAAAGTTaGCCTGAGGAACTTGACACC | + |
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Preference number: 2 (lower is better) Translates to: KQIQFQNSKGYTEKPYLKGEDQS*PEELDT Trigger: GGTGTCAAGTTCCTCAGGGCAACTTTGATCTTCACC...CTTGAGATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCTTGTCTGGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGACTGCAAAACCCTGCTaGAGAGGAGAGGAGAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QVLSGQHQVTILDLKIEETAKPC*RGEERR Trigger: TCTCCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGT...CTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCAGACAAGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR GCA 90 bp | ACAAACAAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATAAGTCAGAGGCCCAGTaGATCCATGAGTTCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: TNKQIQFQNSKGYTEKPYKSEAQ*IHEFSI Trigger: GATAGAGAACTCATGGATGCACTGGGCCTCTGACTT...ATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTTGTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGTTCAGCAGTCATAGGAACCTAGTCTTGGAGCAAAGTTTTAGACTGCACGAAATAATCAAAAGATaGACTGTCCTGGAGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLFSSHRNLVLEQSFRLHEIIKR*TVLEMG Trigger: CCCCATCTCCAGGACAGTCCATCTTTTGATTATTTC...GTGCAGTCTAAAACTTTGCTCCAAGACTAGGTTCCTATGACTGCTGAACAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR TCA 72 bp | AGTAAAGACCCCACAGGCCTGAGCTCCAGAGGATGCTaGAGAGGGGGAGGTCTGAGAAGCCACCTAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: SKDPTGLSSRGC*RGGGLRSHLVS Trigger: AGACACTAGGTGGCTTCTCAGACCTCCCCCTCTTCAGCATCCTCTGGAGCTCAGGCCTGTGGGGTCTTTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR CCA 72 bp | GCTGGTGTGGAGCTGCTTCCATGCTGTACAGAGCCCTaGGCTCTGGGGTTAATCCTGAAGCTGGTGTCATTC | + |
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Preference number: 3 (lower is better) Translates to: AGVELLPCCTEP*ALGLILKLVSF Trigger: GAATGACACCAGCTTCAGGATTAACCCCAGAGCCCAGGGCTCTGTACAGCATGGAAGCAGCTCCACACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR CCA 72 bp | TTCAGAGCTAACCTGGAGTACACTGCAAAACCCTGCTaGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: FRANLEYTAKPC*RGEERRGEERR Trigger: TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGTGTACTCCAGGTTAGCTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR CCA 72 bp | CACTGGGCTATGGAGACATCACCCACTGTGGTGACCTaGCAGGACATTCAGAGTCACATCAGGACTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: HWAMETSPTVVT*QDIQSHIRTCP Trigger: AGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCATAGCCCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR CCA 72 bp | ACACAAGAGTGGGGGATGACTAGTTCAGAGCTAACCTaGAGTACACTGCAAAACCCTGCTGGAGAGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TQEWGMTSSELT*STLQNPAGEER Trigger: CCTCTCCTCTCCAGCAGGGTTTTGCAGTGTACTCCAGGTTAGCTCTGAACTAGTCATCCCCCACTCTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGTCCGCTCCCTATTCCTaGTTCAGCAGTCATAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: METSPTVVTWQDIQSHIRSAPYS*FSSHRN Trigger: GTTCCTATGACTGCTGAACAAGGAATAGGGAGCGGA...CCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR TCA 72 bp | GGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTTaGGAGCGTTGGGACAGAAGCTTCAAGCAAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: GQGPAMGIFGVV*ERWDRSFKQEK Trigger: CTTTTCTTGCTTGAAGCTTCTGTCCCAACGCTCTCAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR TCA 72 bp | TCAACTGAAAGGATAGGAAGAGCAGTAGCAGTTTGGTaGGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACC | + |
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Preference number: 3 (lower is better) Translates to: STERIGRAVAVW*VGEDAGVVSAT Trigger: GGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACTGCTACTGCTCTTCCTATCCTTTCAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGGCAAATGCTCAATCACCAGACTATAGCCCAACCCTCAACACACATACACTTGGTGTTAAGGGGTaGAAAGGGGTGGAGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: CEANAQSPDYSPTLNTHTLGVKG*KGVEKG Trigger: ACCCTTCTCCACCCCTTTCAACCCCTTAACACCAAG...TGTATGTGTGTTGAGGGTTGGGCTATAGTCTGGTGATTGAGCATTTGCCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGGACATTCAGAGTCACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTTACAGGGGTGTGATTTaGCCAGCTACAGATAGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LAGHSESHQDLSFLMLFLYRGVI*PATDSF Trigger: GAAACTATCTGTAGCTGGCAAAATCACACCCCTGTA...AAGGAAGAGCATGAGAAAGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGGGAGTTTTGGCTCCTTaGAAAACCACAGAAATATTA | + |
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Preference number: 3 (lower is better) Translates to: METSPTVVTWQDIQSHIRGVLAP*KTTEIL Trigger: TAATATTTCTGTGGTTTTCAAAGGAGCCAAAACTCC...CCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR GCA 72 bp | GGTGTTGTGTACCTAACGGGAATTGAAATCAGAGTATaGCCTGAGCCTGTAAGTTCAAGTCTTGTCTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GVVYLTGIEIRV*PEPVSSSLVWA Trigger: TGCCCAGACAAGACTTGAACTTACAGGCTCAGGGCATACTCTGATTTCAATTCCCGTTAGGTACACAACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGGACATTCAGAGTCACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTCATAGGAACCTAGTCTaGGAGCAAAGTTTTAGACTG | + |
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Preference number: 3 (lower is better) Translates to: LAGHSESHQDLSFLMLFLHRNLV*EQSFRL Trigger: CAGTCTAAAACTTTGCTCCAAGACTAGGTTCCTATG...AAGGAAGAGCATGAGAAAGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGCAGGACATTCAGAGTCACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTGACAGTTTTGGAGTTTaGGCTCCTTTGAAAACCACA | + |
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Preference number: 3 (lower is better) Translates to: LAGHSESHQDLSFLMLFLDSFGV*APLKTT Trigger: TGTGGTTTTCAAAGGAGCCAAAACTCCAAAACTGTC...AAGGAAGAGCATGAGAAAGGACAAGTCCTGATGTGACTCTGAATGTCCTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR GCA 72 bp | ACACATACACCAGGAGATATTAAGTCAGAGGCCCAGTaGATCCATGAGTTCTCTATCTTCATCACTTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: THTPGDIKSEAQ*IHEFSIFITWW Trigger: CCACCAAGTGATGAAGATAGAGAACTCATGGATGCACTGGGCCTCTGACTTAATATCTCCTGGTGTATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR TCA 72 bp | AGCTACACCCGCCTTACATCCTGGTCCTCACAGCACTaGGAGATAATTTGTGAGTCATCTTTACTAAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: SYTRLTSWSSQH*EIICESSLLRF Trigger: AAACCTTAGTAAAGATGACTCACAAATTATCTCTCAGTGCTGTGAGGACCAGGATGTAAGGCGGGTGTAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR TCA 72 bp | TACATCCTGGTCCTCACAGCACTGAGAGATAATTTGTaGGTCATCTTTACTAAGGTTTTCCACTTTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: YILVLTALRDNL*VIFTKVFHFGG Trigger: CCCACCAAAGTGGAAAACCTTAGTAAAGATGACTCACAAATTATCTCTCAGTGCTGTGAGGACCAGGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR CCA 72 bp | TGGTTGTTGGTTGGTTGGTTGGTTGTTGGTCTCAGTTaGTTAAGTAGTTGTGCACAAAGAAGAGACAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: WLLVGWLVVGLS*LSSCAQRRDKK Trigger: CTTCTTGTCTCTTCTTTGTGCACAACTACTTAACCAACTGAGACCAACAACCAACCAACCAACCAACAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| 3UTR GCA 72 bp | GAAGAAATTAGATATCCTGATGGTGAAGATCAAAGTTaGCCTGAGGAACTTGACACCCTTAATCAGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: EEIRYPDGEDQS*PEELDTLNQQE Trigger: TTCCTGCTGATTAAGGGTGTCAAGTTCCTCAGGGCAACTTTGATCTTCACCATCAGGATATCTAATTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR GCA 90 bp | GACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGACTTGGGCCCCGAGGCGGACTaGCAGGCGTCTGGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: DITHCGDLAGHSESHQDLGPEAD*QASGKP Trigger: GGGCTTCCCAGACGCCTGGCAGTCCGCCTCGGGGCC...CAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR GCA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTGGCCCCGAGGCGGACTaGCAGGCGTCTGGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSGPEAD*QASGKP Trigger: GGGCTTCCCAGACGCCTGGCAGTCCGCCTCGGGGCC...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS-3UTR GCA 90 bp | CCTGAAGCTGGTGTCATTCCAGGAGGTGGCTCAGGCTCTGGAGTCTTCCCAGGGTGCAGCCAGAACACCTaGAGCTGTGAAGCCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PEAGVIPGGGSGSGVFPGCSQNT*SCEALG Trigger: GCCAAGGGCTTCACAGCTGCAGGTGTTCTGGCTGCA...CCCTGGGAAGACTCCAGAGCCTGAGCCACCTCCTGGAATGACACCAGCTTCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTGGAGCTGCTTCCATGCTGTACAGAGCCCTGGGCTCTGGGGTTAATCAGCACATGCAAGGCATaGATGGTGGCCCCACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGVELLPCCTEPWALGLISTCKA*MVAPPG Trigger: TCCGGGTGGGGCCACCATCCATGCCTTGCATGTGCT...GATTAACCCCAGAGCCCAGGGCTCTGTACAGCATGGAAGCAGCTCCACACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR TCA 90 bp | AGTACACTGCAAAACCCTGCTGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGCATCCAGGGCTGTaGAAGCATAGGCAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: STLQNPAGEERRGEERRGEHPGL*KHRQGR Trigger: GCGGCCCTGCCTATGCTTTCACAGCCCTGGATGCTC...TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGTGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR GCA 90 bp | GGGAACAGGAGGAAGGCTGGCAGACAAATCATTCCTTGCCTGCTGGGACCAGGTTGCAGCCAGAACACCTaGAGCTGTGAAGCCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNRRKAGRQIIPCLLGPGCSQNT*SCEALG Trigger: GCCAAGGGCTTCACAGCTGCAGGTGTTCTGGCTGCA...ACCTGGTCCCAGCAGGCAAGGAATGATTTGTCTGCCAGCCTTCCTCCTGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR GCA 90 bp | AAGGAGGTACACGATGTCTTGGGCCAGCTGGTCATCACAGAAAGGGAGAGGCCACCGCTCTCCAGCACATaGAAGGCATGGATGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KEVHDVLGQLVITERERPPLSST*KAWMVA Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGCGG...TGGCCTCTCCCTTTCTGTGATGACCAGCTGGCCCAAGACATCGTGTACCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCAGCACATGCAAGGCATaGATGGTGGCCCCACCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFGELGKMQESCQLPEKFSTCKA*MVAPPG Trigger: TCCGGGTGGGGCCACCATCCATGCCTTGCATGTGCT...GAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | GGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTTTTCCCCAGTGCCTGGAGAGATGGTCTCCTaGTCAGCCATGGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKMQESCQLPEKFFSPVPGEMVS*SAMVCS Trigger: GCTGCAGACCATGGCTGACCAGGAGACCATCTCTCC...AGGCACTGGGGAAAAGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR TCA 90 bp | AGTACACTGCAAAACCCTGCTGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAACACCTGCAGCTGTaGAGCCCTTGGCTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STLQNPAGEERRGEERRGEHLQL*SPWLEQ Trigger: TTGCTCTAGCCAAGGGCTTCACAGCTGCAGGTGTTC...TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTCTGTGGCATACACAGTaGCCCCCTCCCGTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSLWHTQ*PPPVPR Trigger: TCGTGGTACGGGAGGGGGTCACTGTGTATGCCACAG...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR GCA 90 bp | GGGAACAGGAGGAAGGCTGGCAGACAAATCATTCCTTGCCTGCTGGGACCAGGTGTTGATGGTGACCCCTaGCGCACAAGACACCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNRRKAGRQIIPCLLGPGVDGDP*RTRHHN Trigger: ATTGTGGTGTCTTGTGCGGCAGGGGTCACCATCAAC...ACCTGGTCCCAGCAGGCAAGGAATGATTTGTCTGCCAGCCTTCCTCCTGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGTGGAGCTGCTTCCATGCTGTACAGAGCCCTGGGCTCTGGGGTTAATCAGCTTGGTCCATGTCTaGGGAGCTGGCCATTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGVELLPCCTEPWALGLISLVHV*GAGHYL Trigger: AAGATAATGGCCAGCTCCCCAGACATGGACCAAGCT...GATTAACCCCAGAGCCCAGGGCTCTGTACAGCATGGAAGCAGCTCCACACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGGAAAGTAGGGAACAGGAGGAAGGCTGGCAGACAAATCATTCCTTGCCTGGCAAGGCATGGATGGTaGCCCCACCCGGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERKVGNRRKAGRQIIPCLARHGW*PHPESR Trigger: TCTGCTCTCCGGGTGGGGCCACCATCCATGCCTTGC...CAGGCAAGGAATGATTTGTCTGCCAGCCTTCCTCCTGTTCCCTACTTTCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR GCA 90 bp | TTGCTGACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTTGGGCCATTATCTTGTGTaGAGCCAGAACACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLWARACYGDIRCCLGHYLV*SQNTCS Trigger: GCTGCAGGTGTTCTGGCTGCACACAAGATAATGGCC...CAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | GGCTATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATGGCAGTGGCTTGACATaGTCAGAAGACAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYGDITHCGDLAGHSESHGSGLT*SEDREA Trigger: GGCCTCTCTGTCTTCTGACCATGTCAAGCCACTGCC...ATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| 3UTR CAA 72 bp | TCCACTTTGGTGGGTCGGGGGTCCGCTCCCTATTCCTaGTTCAGCAGTCATAGGAACCTAGTCTTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STLVGRGSAPYS*FSSHRNLVLEQ Trigger: TTGCTCCAAGACTAGGTTCCTATGACTGCTGAACAAGGAATAGGGAGCGGACCCCCGACCCACCAAAGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR TCA 90 bp | AGTACACTGCAAAACCCTGCTGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAAGCAGACATTATCCTTaGGCTGGCTGGGATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: STLQNPAGEERRGEERRGSRHYP*AGWDAV Trigger: AACAGCATCCCAGCCAGCTCAAGGATAATGTCTGCT...TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCAGCAGGGTTTTGCAGTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | TTGCTGACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTTGACAGTCTCTTTGTTGTaGGGTGTCAGGTTCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLWARACYGDIRCCLTVSLL*GVRFTP Trigger: AGGGGTGAACCTGACACCCCACAACAAAGAGACTGT...CAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | ACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTACCACCTGCTCAAGTGTCATGCAAGGCATGGATGGTaGCCCCACCCGGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSGLVLSHALPYHLLKCHARHGW*PHPESR Trigger: TCTGCTCTCCGGGTGGGGCCACCATCCATGCCTTGC...ATGACACTTGAGCAGGTGGTAAGGAAGAGCATGAGAAAGGACAAGTCCTGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTGGCAGTGGCTTGACATaGTCAGAAGACAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSGSGLT*SEDREA Trigger: GGCCTCTCTGTCTTCTGACCATGTCAAGCCACTGCC...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGAGACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATAGCAGACATTATCCTTaGGCTGGCTGGGATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYGDITHCGDLAGHSESHSRHYP*AGWDAV Trigger: AACAGCATCCCAGCCAGCTCAAGGATAATGTCTGCT...ATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTCTCCATAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR GCA 90 bp | TCATGCTCTTCCTTACCACCTGCTCAAGTGTCATTTAGGAAGCACCAGCCGTGGGGCCATTATCTTGTGTaGAGCCAGAACACCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSSLPPAQVSFRKHQPWGHYLV*SQNTCS Trigger: GCTGCAGGTGTTCTGGCTGCACACAAGATAATGGCC...CCACGGCTGGTGCTTCCTAAATGACACTTGAGCAGGTGGTAAGGAAGAGCATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR GCA 90 bp | ACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTACCACCTGCTCAAGTGTCATCCGCTCTCCAGCACATaGAAGGCATGGATGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGLVLSHALPYHLLKCHPLSST*KAWMVA Trigger: GGCCACCATCCATGCCTTGCATGTGCTGGAGAGCGG...ATGACACTTGAGCAGGTGGTAAGGAAGAGCATGAGAAAGGACAAGTCCTGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCAGCTTGGTCCATGTCTaGGGAGCTGGCCATTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFGELGKMQESCQLPEKFSLVHV*GAGHYL Trigger: AAGATAATGGCCAGCTCCCCAGACATGGACCAAGCT...GAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | TTGCTGACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTTGAAGAGCACATCACTGTaGCGCACAGTCTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWLWARACYGDIRCCLKSTSL*RTVSLL Trigger: CAACAAAGAGACTGTGCGCCACAGTGATGTGCTCTT...CAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCACATTATCCTTGAGCTaGCTGGGATGCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QFGELGKMQESCQLPEKFTLSLS*LGCCSE Trigger: CTCAGAACAGCATCCCAGCCAGCTCAAGGATAATGT...GAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | GACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGACTTGACATTATCCTTGAGCTaGCTGGGATGCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DITHCGDLAGHSESHQDLTLSLS*LGCCSE Trigger: CTCAGAACAGCATCCCAGCCAGCTCAAGGATAATGT...CAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATCTCAAGCTGTGGCATACACAGTaGCCCCCTCCCGTACCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KQIQFQNSKGYTEKPYLKLWHTQ*PPPVPR Trigger: TCGTGGTACGGGAGGGGGTCACTGTGTATGCCACAG...CTTGAGATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | TCTCATGCTCTTCCTTACCACCTGCTCAAGTGTCATTTAGGAAGCACCAGCCGTACTTTGGGGGCAGGTTaGAACGCTGTCAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHALPYHLLKCHLGSTSRTLGAG*NAVSFF Trigger: AAAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGT...ACGGCTGGTGCTTCCTAAATGACACTTGAGCAGGTGGTAAGGAAGAGCATGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| 3UTR CAA 72 bp | TGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTaGAGAGCGTTGGGACAGAAGCTTCAAGCAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: WARACYGDIRCC*RALGQKLQARK Trigger: TTTTCTTGCTTGAAGCTTCTGTCCCAACGCTCTCAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| 3UTR CAA 72 bp | CCCTATTCCTTGTTCAGCAGTCATAGGAACCTAGTCTaGGAGCAAAGTTTTAGACTGCACACACCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYSLFSSHRNLV*EQSFRLHTPRA Trigger: GGCCCTGGGTGTGTGCAGTCTAAAACTTTGCTCCAAGACTAGGTTCCTATGACTGCTGAACAAGGAATAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTAGATATCCTGATGGTGAAGATCAAAGTTGCCCTGAGGAACTTGACACCGGACTGCCAGGCGTCTaGGAAGCCCCATTTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: EIRYPDGEDQSCPEELDTGLPGV*EAPFSH Trigger: GTGTGAAAATGGGGCTTCCCAGACGCCTGGCAGTCC...GGTGTCAAGTTCCTCAGGGCAACTTTGATCTTCACCATCAGGATATCTAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTAGATATCCTGATGGTGAAGATCAAAGTTGCCCTGAGGAACTTGACACCGAACACCTGCAGCTGTaGAGCCCTTGGCTAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIRYPDGEDQSCPEELDTEHLQL*SPWLEQ Trigger: TTGCTCTAGCCAAGGGCTTCACAGCTGCAGGTGTTC...GGTGTCAAGTTCCTCAGGGCAACTTTGATCTTCACCATCAGGATATCTAATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGCAAATGCTCAATCACCAGACTATAGCCCAACCCTCAACACACATACAACAGTCTCTTTGTTGTaGGGTGTCAGGTTCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CEANAQSPDYSPTLNTHTTVSLL*GVRFTP Trigger: AGGGGTGAACCTGACACCCCACAACAAAGAGACTGT...TGTATGTGTGTTGAGGGTTGGGCTATAGTCTGGTGATTGAGCATTTGCCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | ACAAACAAACAAATACAGTTCCAGAACAGCAAGGGCTACACAGAGAAACCCTATGGAGAGATGGTCTCCTaGTCAGCCATGGTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNKQIQFQNSKGYTEKPYGEMVS*SAMVCS Trigger: GCTGCAGACCATGGCTGACCAGGAGACCATCTCTCC...ATAGGGTTTCTCTGTGTAGCCCTTGCTGTTCTGGAACTGTATTTGTTTGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTTGTCTGGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGGACTGCCAGGCGTCTaGGAAGCCCCATTTTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLSGQHQVTILDLKIEEGLPGV*EAPFSH Trigger: GTGTGAAAATGGGGCTTCCCAGACGCCTGGCAGTCC...CTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCAGACAAGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | TGTGAGGCAAATGCTCAATCACCAGACTATAGCCCAACCCTCAACACACATACAGTACAGTCTTCTTTATaGCAGCAGGAGAGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CEANAQSPDYSPTLNTHTVQSSL*QQERWS Trigger: AGACCATCTCTCCTGCTGCCATAAAGAAGACTGTAC...TGTATGTGTGTTGAGGGTTGGGCTATAGTCTGGTGATTGAGCATTTGCCTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CCA 90 bp | CAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGATCCTGGCATGTTAACTTTGGGGGCAGGTTaGAACGCTGTCAGCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHQVTILDLKIEEDPGMLTLGAG*NAVSFF Trigger: AAAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGT...TAACATGCCAGGATCCTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CCA 90 bp | TGGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGATCCTGGCATGTACAGTCTTCTTTATaGCAGCAGGAGAGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WATSSHYLRLKDRRGSWHVQSSL*QQERWS Trigger: AGACCATCTCTCCTGCTGCCATAAAGAAGACTGTAC...ATGCCAGGATCCTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CAA 90 bp | CCTGAAGCTGGTGTCATTCCAGGAGGTGGCTCAGGCTCTGGAGTCTTCCCAGGGTGGCGCACAGTCTCTTaGTTGTGGGGTGTCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEAGVIPGGGSGSGVFPGWRTVS*LWGVRF Trigger: GAACCTGACACCCCACAACAAAGAGACTGTGCGCCA...CCCTGGGAAGACTCCAGAGCCTGAGCCACCTCCTGGAATGACACCAGCTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGACCTGGCTGTGGGCAAGGGCCTGCTATGGGGATATTCGGTGTTGTTTGGAGTCTAGTAGCATCTaGGCTGCCCCCAGGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLTWLWARACYGDIRCCLESSSI*AAPRRA Trigger: GGCCCTCCTGGGGGCAGCCAAGATGCTACTAGACTC...CAAACAACACCGAATATCCCCATAGCAGGCCCTTGCCCACAGCCAGGTCAGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGCCCATAAAGCAGCAAAGCACAGCTACACCCGCCTTACATCCTGGTCCGCAGCTGTGAAGCCCTaGGCTAGAGCAAAGGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRAHKAAKHSYTRLTSWSAAVKP*ARAKAS Trigger: GCTAGCCTTTGCTCTAGCCAAGGGCTTCACAGCTGC...GGACCAGGATGTAAGGCGGGTGTAGCTGTGCTTTGCTGCTTTATGGGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACAGGAGGAAGGCTGGCAGACAAATCATTCCTTGCCTGCTGGGACCAGGTCGCACAGTCTCTTTGTaGTGGGGTGTCAGGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GNRRKAGRQIIPCLLGPGRTVSL*WGVRFT Trigger: GGTGAACCTGACACCCCACAACAAAGAGACTGTGCG...ACCTGGTCCCAGCAGGCAAGGAATGATTTGTCTGCCAGCCTTCCTCCTGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CAA 90 bp | GAAGAAAGCAGAGCCCATAAAGCAGCAAAGCACAGCTACACCCGCCTTACATCCGAGTCTAGTAGCATCTaGGCTGCCCCCAGGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EESRAHKAAKHSYTRLTSESSSI*AAPRRA Trigger: GGCCCTCCTGGGGGCAGCCAAGATGCTACTAGACTC...GGATGTAAGGCGGGTGTAGCTGTGCTTTGCTGCTTTATGGGCTCTGCTTTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS GCA 90 bp | TTGGAACGCTGTCAGCTTCTTTTCGATGGAGTTGATGGTGACCCCTaGCGCACAAGACACCACAATGTGCCTGTCCTCAATGTTCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LERCQLLFDGVDGDP*RTRHHNVPVLNVRP Trigger: GGGGCGAACATTGAGGACAGGCACATTGTGGTGTCTTGTGCGGCAGGGGTCACCATCAACTCCATCGAAAAGAAGCTGACAGCGTTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026133.15 ENSMUST00000139706.2 ENSMUST00000141254.8 ENSMUST00000151876.8 ENSMUST00000170556.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTATGCCCTGAGCCTGTAAGTTCAAGTCTTGTCTGGGCAACATCAAGTCACGGCCGAGACCGTAGCTaGGTCCATGTCTGGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RVCPEPVSSSLVWATSSHGRDRS*VHVWGA Trigger: AGCTCCCCAGACATGGACCAAGCTACGGTCTCGGCC...GTGACTTGATGTTGCCCAGACAAGACTTGAACTTACAGGCTCAGGGCATACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGCCCATAAAGCAGCAAAGCACAGCTACACCCGCCTTACATCCTGGTCCGAGGCTTCCACAGCGTaGATAAGCAAGGAGCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRAHKAAKHSYTRLTSWSEASTA*ISKERK Trigger: CTTTCGCTCCTTGCTTATCAACGCTGTGGAAGCCTC...GGACCAGGATGTAAGGCGGGTGTAGCTGTGCTTTGCTGCTTTATGGGCTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGGCAAATGCTCAATCACCAGACTATAGCCCAACCCTCAACACACATACAGGCCGAGACCGTAGCTaGGTCCATGTCTGGGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: CEANAQSPDYSPTLNTHTGRDRS*VHVWGA Trigger: AGCTCCCCAGACATGGACCAAGCTACGGTCTCGGCC...TGTATGTGTGTTGAGGGTTGGGCTATAGTCTGGTGATTGAGCATTTGCCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR CAA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTTGGCGCACAGTCTCTTaGTTGTGGGGTGTCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSWRTVS*LWGVRF Trigger: GAACCTGACACCCCACAACAAAGAGACTGTGCGCCA...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS-3UTR CAA 90 bp | GACATCACCCACTGTGGTGACCTGGCAGGACATTCAGAGTCACATCAGGACTTGGAGCAGACATTATCCTaGAGCTGGCTGGGATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: DITHCGDLAGHSESHQDLEQTLS*SWLGCC Trigger: ACAGCATCCCAGCCAGCTCAAGGATAATGTCTGCTC...CAAGTCCTGATGTGACTCTGAATGTCCTGCCAGGTCACCACAGTGGGTGATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR CAA 90 bp | AGAGTATGCCCTGAGCCTGTAAGTTCAAGTCTTGTCTGGGCAACATCAAGTCACGCAGCTGTGAAGCCCTaGGCTAGAGCAAAGGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: RVCPEPVSSSLVWATSSHAAVKP*ARAKAS Trigger: GCTAGCCTTTGCTCTAGCCAAGGGCTTCACAGCTGC...GTGACTTGATGTTGCCCAGACAAGACTTGAACTTACAGGCTCAGGGCATACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS-3UTR CAA 90 bp | GAAAGGAAAGTAGGGAACAGGAGGAAGGCTGGCAGACAAATCATTCCTTGCCTGGACTTTGGGGGCAGGTaGGAACGCTGTCAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: ERKVGNRRKAGRQIIPCLDFGGR*ERCQLL Trigger: AAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGTC...CAGGCAAGGAATGATTTGTCTGCCAGCCTTCCTCCTGTTCCCTACTTTCCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS-3UTR CAA 90 bp | AGTTTGGTGAGTTGGGGAAGATGCAGGAGTCGTGTCAGCTACCCGAGAAGTTCTGAGGCTTCCACAGCGTaGATAAGCAAGGAGCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLVSWGRCRSRVSYPRSSEASTA*ISKERK Trigger: CTTTCGCTCCTTGCTTATCAACGCTGTGGAAGCCTC...AGAACTTCTCGGGTAGCTGACACGACTCCTGCATCTTCCCCAACTCACCAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS-3UTR CAA 90 bp | ACATCAGGACTTGTCCTTTCTCATGCTCTTCCTTACCACCTGCTCAAGTGTCATGACTTTGGGGGCAGGTaGGAACGCTGTCAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: TSGLVLSHALPYHLLKCHDFGGR*ERCQLL Trigger: AAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGTC...ATGACACTTGAGCAGGTGGTAAGGAAGAGCATGAGAAAGGACAAGTCCTGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170556.8 |
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| CDS-3UTR CAA 90 bp | CAAGTCTTGTCTGGGCAACATCAAGTCACTATCTTAGACTTAAAGATAGAAGAGGAGCAGACATTATCCTaGAGCTGGCTGGGATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: QVLSGQHQVTILDLKIEEEQTLS*SWLGCC Trigger: ACAGCATCCCAGCCAGCTCAAGGATAATGTCTGCTC...CTCTTCTATCTTTAAGTCTAAGATAGTGACTTGATGTTGCCCAGACAAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026133.15 |
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| CDS CCA 72 bp | GAGTCTAGTAGCATCTTGGCTGCCCCCAGGAGGGCCTaGGCCCCGAGGCGGACTGCCAGGCGTCTGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ESSSILAAPRRA*APRRTARRLGS Trigger: GCTTCCCAGACGCCTGGCAGTCCGCCTCGGGGCCCAGGCCCTCCTGGGGGCAGCCAAGATGCTACTAGACTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026133.15 ENSMUST00000141254.8 ENSMUST00000170556.8 |
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| CDS CAA 72 bp | AGCTCCCGTGTACGGATGCAGGAGGCTTCCACAGCGTaGATAAGCAAGGAGCGAAAGCCCCCGCTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSRVRMQEASTA*ISKERKPPLSS Trigger: GCTGGAGAGCGGGGGCTTTCGCTCCTTGCTTATCAACGCTGTGGAAGCCTCCTGCATCCGTACACGGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026133.15 ENSMUST00000170556.8 |
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| CDS CAA 90 bp | ATGGTCTGCAGCTCCCGTGTACGGATGCAGGAGGCTTCCACAGCGTaGATAAGCAAGGAGCGAAAGCCCCCGCTCTCCAGCACATGCAAG | + |
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Preference number: 6 (lower is better) Translates to: MVCSSRVRMQEASTA*ISKERKPPLSSTCK Trigger: CTTGCATGTGCTGGAGAGCGGGGGCTTTCGCTCCTTGCTTATCAACGCTGTGGAAGCCTCCTGCATCCGTACACGGGAGCTGCAGACCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026133.15 ENSMUST00000170556.8 |
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| CDS CAA 72 bp | GCAGGTTGGAACGCTGTCAGCTTCTTTTCGATGGAGTaGATGGTGACCCCTGCCGCACAAGACACCACAATG | + |
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Preference number: 6 (lower is better) Translates to: AGWNAVSFFSME*MVTPAAQDTTM Trigger: CATTGTGGTGTCTTGTGCGGCAGGGGTCACCATCAACTCCATCGAAAAGAAGCTGACAGCGTTCCAACCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026133.15 ENSMUST00000139706.2 ENSMUST00000141254.8 ENSMUST00000151876.8 ENSMUST00000170556.8 |
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| CDS GCA 72 bp | TGTCAGCTTCTTTTCGATGGAGTTGATGGTGACCCCTaGCGCACAAGACACCACAATGTGCCTGTCCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CQLLFDGVDGDP*RTRHHNVPVLN Trigger: ATTGAGGACAGGCACATTGTGGTGTCTTGTGCGGCAGGGGTCACCATCAACTCCATCGAAAAGAAGCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000026133.15 ENSMUST00000139706.2 ENSMUST00000141254.8 ENSMUST00000151876.8 ENSMUST00000170556.8 |
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| CDS CCA 72 bp | GTGTTAGTCATACATCGGATGACTTTGGGGGCAGGTTaGAACGCTGTCAGCTTCTTTTCGATGGAGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: VLVIHRMTLGAG*NAVSFFSMELM Trigger: CATCAACTCCATCGAAAAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGTCATCCGATGTATGACTAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026133.15 ENSMUST00000139706.2 ENSMUST00000141254.8 ENSMUST00000151876.8 ENSMUST00000170556.8 |
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| CDS CAA 72 bp | GGTGTTAGTCATACATCGGATGACTTTGGGGGCAGGTaGGAACGCTGTCAGCTTCTTTTCGATGGAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GVSHTSDDFGGR*ERCQLLFDGVD Trigger: ATCAACTCCATCGAAAAGAAGCTGACAGCGTTCCAACCTGCCCCCAAAGTCATCCGATGTATGACTAACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000026133.15 ENSMUST00000139706.2 ENSMUST00000141254.8 ENSMUST00000151876.8 ENSMUST00000170556.8 |
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