Pregenerated sensors for PYCARD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030793Ensembl transcript IDs: ENSMUST00000033056.5, ENSMUST00000205594.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGTAACTCCTGTTCCAGGGGATCTGATGCCCTCTTCTGGCTTTaGTTGGCATTGCATGAAATGGTGCACACATATGAACAGCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ASNSCSRGSDALFWL*LALHEMVHTYEQPH Trigger: GTGGGGCTGTTCATATGTGTGCACCATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAGGAGTTACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CCA 90 bp | GGCTCAGCCAGTAACTCCTGTTCCAGGGGATCTGATGCCCTCTTCTaGCTTTGGTTGGCATTGCATGAAATGGTGCACACATATGAACAG | + |
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Preference number: 1 (lower is better) Translates to: GSASNSCSRGSDALF*LWLALHEMVHTYEQ Trigger: CTGTTCATATGTGTGCACCATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAGGAGTTACTGGCTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CCA 90 bp | GGGCCTAGAATACCAAACACCTATCAACTTCATTCCCTCCACCAGTaGACTTGGTCTAGTCTAAAGCCTTTACTGCAACAGGCCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: GPRIPNTYQLHSLHQ*TWSSLKPLLQQASD Trigger: GTCAGAGGCCTGTTGCAGTAAAGGCTTTAGACTAGACCAAGTCCACTGGTGGAGGGAATGAAGTTGATAGGTGTTTGGTATTCTAGGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CCA 90 bp | AGAATACCAAACACCTATCAACTTCATTCCCTCCACCAGTGGACTTaGTCTAGTCTAAAGCCTTTACTGCAACAGGCCTCTGACTGGACC | + |
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Preference number: 1 (lower is better) Translates to: RIPNTYQLHSLHQWT*SSLKPLLQQASDWT Trigger: GGTCCAGTCAGAGGCCTGTTGCAGTAAAGGCTTTAGACTAGACCAAGTCCACTGGTGGAGGGAATGAAGTTGATAGGTGTTTGGTATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR TCA 90 bp | CTGCTGAGAGACCTGAAAGTACAGATGAGAGAAACAGAATGGCCCTaGAGCTCACAGCCCAGAGTTAGTATGCAGCAAAAAGAACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLRDLKVQMRETEWP*SSQPRVSMQQKEQE Trigger: TTCCTGTTCTTTTTGCTGCATACTAACTCTGGGCTGTGAGCTTCAGGGCCATTCTGTTTCTCTCATCTGTACTTTCAGGTCTCTCAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR TCA 90 bp | TGTAGAGAGCTTCGTTCACCCTGGTTTTGTCTTCTGTCCACTGAATaGTGGCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: CRELRSPWFCLLSTE*WQYLLISALLRDLK Trigger: TTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGCCATCATTCAGTGGACAGAAGACAAAACCAGGGTGAACGAAGCTCTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CCA 90 bp | TTCCATATGTACCCCACTGTCTGTTCACACTTGGCACCAAACACTTaGATTACAACTCATGGAAACCTTGAAGTCTACTTGTCTCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: FHMYPTVCSHLAPNT*ITTHGNLEVYLSQH Trigger: ATGCTGAGACAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGTGTTTGGTGCCAAGTGTGAACAGACAGTGGGGTACATATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR TCA 90 bp | CCACCATGCACAGGGCATTTAAGATTCTGTGTTCTACTTTTTCCATaGTTGCACTATTTTCACAGGAGAGGTAGAGGTATGAGCAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: PPCTGHLRFCVLLFP*LHYFHRRGRGMSRL Trigger: TAACCTGCTCATACCTCTACCTCTCCTGTGAAAATAGTGCAATCATGGAAAAAGTAGAACACAGAATCTTAAATGCCCTGTGCATGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR GCA 90 bp | CAAAATTGCAGAATTCTTAGTTTGTCTAGCTTTGGCCACTGGAGATaGGTAGGGCTGTTTGGTGGGTTAACTTTAGTTACAACCAGGATT | + |
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Preference number: 1 (lower is better) Translates to: QNCRILSLSSFGHWR*VGLFGGLTLVTTRI Trigger: AATCCTGGTTGTAACTAAAGTTAACCCACCAAACAGCCCTACGCATCTCCAGTGGCCAAAGCTAGACAAACTAAGAATTCTGCAATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CCA 90 bp | CTTGAAGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTaGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAATAAA | + |
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Preference number: 1 (lower is better) Translates to: LEVYLSQHAQSMHKH*LREYYFSVSLRRNK Trigger: TTTATTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | GATAGTCTTTTGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAAACTGCAACAGGCCTCTaGCTGGACCTCCCTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: DSLLCSWFRGGSPGAQMETATGL*LDLPAR Trigger: TCTAGCAGGGAGGTCCAGTCAGAGGCCTGTTGCAGT...TTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATTGGATGCCCTACTGGAAAGAGCCCTCTTCTGGCTTTaGTTGGCATTGCATGAAATG | + |
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Preference number: 2 (lower is better) Translates to: FRGGSPGAQMELDALLERALFWL*LALHEM Trigger: CATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGC...TCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 90 bp | AGTAACTCCTGTTCCAGGGGATCTGATGCCCTCTTCTGGCTTTGGTaGGCATTGCATGAAATGGTGCACACATATGAACAGCCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SNSCSRGSDALFWLW*ALHEMVHTYEQPHP Trigger: GGGGTGGGGCTGTTCATATGTGTGCACCATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAGGAGTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 90 bp | CAGTGGGGCTTGAGACTGCTGGTGACAAGTCTAGCTTCTGTCAGTTaGTTAGTGCCTAAAACAGCTGTTGTGGCTCTGGGCAGGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: QWGLRLLVTSLASVS*LVPKTAVVALGRTA Trigger: AGCAGTCCTGCCCAGAGCCACAACAGCTGTTTTAGGCACTAACAAACTGACAGAAGCTAGACTTGTCACCAGCAGTCTCAAGCCCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | GATAGTCTTTTGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAAGAGCCAGGAATCATTTaGGAAGCCTTTGCACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: DSLLCSWFRGGSPGAQMEEPGII*EAFALE Trigger: TTCTAGTGCAAAGGCTTCTCAAATGATTCCTGGCTC...TTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATTGGATGCCCTACTGGAAAGATTGGCACCAAACACTTaGATTACAACTCATGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FRGGSPGAQMELDALLERLAPNT*ITTHGN Trigger: GTTTCCATGAGTTGTAATCCAAGTGTTTGGTGCCAA...TCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATGGAACAGCCTCCTCTaGCTCCTGGTTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRIWNSLL*LLVAGI Trigger: AATCCCAGCAACCAGGAGGCAGAGGAGGCTGTTCCA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATACCCTTGGCTGTTCTaGAACAGCCTCCTCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRIYPWLF*NSLLCL Trigger: GAGGCAGAGGAGGCTGTTCCAGAACAGCCAAGGGTA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | TCCATAGGTAGGACCATAAATAACACTTGGAAGAGTAGCTACTGGACTGGGGATGAAACAGAATGGCCCTaGAGCTCACAGCCCAGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SIGRTINNTWKSSYWTGDETEWP*SSQPRV Trigger: AACTCTGGGCTGTGAGCTTCAGGGCCATTCTGTTTC...ATCCCCAGTCCAGTAGCTACTCTTCCAAGTGTTATTTATGGTCCTACCTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGAGAGACCTGAAAGTACAGATGAGAGAAACAGAATGGCCCTGAAGCTCGTCTTCAAGCTTCTGTaGAGACATGCACCCGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TAERPESTDERNRMALKLVFKLL*RHAPVF Trigger: AAACACGGGTGCATGTCTGCACAGAAGCTTGAAGAC...GAGCTTCAGGGCCATTCTGTTTCTCTCATCTGTACTTTCAGGTCTCTCAGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | TCCATAGGTAGGACCATAAATAACACTTGGAAGAGTAGCTACTGGACTGGGGATGCCTCCTCTGCCTCCTaGTTGCTGGGATTAACCATT | + |
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Preference number: 2 (lower is better) Translates to: SIGRTINNTWKSSYWTGDASSAS*LLGLTI Trigger: AATGGTTAATCCCAGCAACCAGGAGGCAGAGGAGGC...ATCCCCAGTCCAGTAGCTACTCTTCCAAGTGTTATTTATGGTCCTACCTATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATAATGGTGCACACATATaGACAGCCCCACCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDNGAHI*TAPPPK Trigger: TTTTGGGGGTGGGGCTGTTCATATGTGTGCACCATT...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGATGCAGTCGTAACGACTaGTTTTTCCAGGGGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERCSRND*FFQGKP Trigger: GGGTTTCCCCTGGAAAAAGCAGTCGTTACGACTGCA...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATAGGAAAAGCTCCCAAATaGGGAGCCAGGAATCATTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRIGKAPK*GARNHL Trigger: CAAATGATTCCTGGCTCCCCATTTGGGAGCTTTTCC...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 90 bp | CTTGGGTCTGTGGAATTTAGGTGTTGGAGACTGATTTGTGCATGTTaGGTATATGTTCTACCACTGGGCCACATATGGCCTTTGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LGSVEFRCWRLICAC*VYVLPLGHIWPLEM Trigger: CATTTCCAAAGGCCATATGTGGCCCAGTGGTAGAACATATACCAAACATGCACAAATCAGTCTCCAACACCTAAATTCCACAGACCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 90 bp | GCACCAAACACTTGGATTACAACTCATGGAAACCTTGAAGTCTACTaGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: APNTWITTHGNLEVY*SQHAQSMHKHWLRE Trigger: TTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGTGTTTGGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAACTGTTCCAGGGGATCTaGTGCCCTCTTCTGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: HAQTLAQRILLFSISKTKLFQGI*CPLLAL Trigger: CAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAG...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATTGGTTTGTTTCTAGGTaGCTTTCTAAGCCCCATTGC | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDWFVSR*LSKPHC Trigger: GCAATGGGGCTTAGAAAGGCACCTAGAAACAAACCA...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATCATTGCATGAAATGGTaGACACATATGAACAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDHCMKW*THMNSP Trigger: GGGGCTGTTCATATGTGTGCACCATTTCATGCAATG...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | TCCATAGGTAGGACCATAAATAACACTTGGAAGAGTAGCTACTGGACTGGGGATGGCTTTGGTTGGCATTaGATGAAATGGTGCACACAT | + |
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Preference number: 2 (lower is better) Translates to: SIGRTINNTWKSSYWTGDGFGWH*MKWCTH Trigger: ATGTGTGCACCATTTCATGCAATGCCAACCAAAGCC...ATCCCCAGTCCAGTAGCTACTCTTCCAAGTGTTATTTATGGTCCTACCTATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGAGCCACATATGGCCTTTaGAAATGTAGCTTAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERATYGL*KCSLAQ Trigger: CTGAGCTAAGCTACATTTCCAAAGGCCATATGTGGC...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGAGAGACCTGAAAGTACAGATGAGAGAAACAGAATGGCCCTGAAGCTCGTGGAATTTAGGTGTTaGAGACTGATTTGTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: TAERPESTDERNRMALKLVEFRC*RLICAC Trigger: ACATGCACAAATCAGTCTCCAACACCTAAATTCCAC...GAGCTTCAGGGCCATTCTGTTTCTCTCATCTGTACTTTCAGGTCTCTCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 90 bp | GTTCACACTTGGCACCAAACACTTGGATTACAACTCATGGAAACCTaGAAGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACT | + |
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Preference number: 2 (lower is better) Translates to: VHTWHQTLGLQLMET*KSTCLSMLKACTNT Trigger: AGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGTGTTTGGTGCCAAGTGTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATAACTTGTTAGGCCTTTaGTCCCAGGCCTATTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDNLLGL*SQAYLR Trigger: TCTTAAATAGGCCTGGGATCAAAGGCCTAACAAGTT...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGACATTTGAGAAGCCTTTaGACTAGAATGGAGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERHLRSL*TRMEKP Trigger: TGGCTTCTCCATTCTAGTGCAAAGGCTTCTCAAATG...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATAAGCCCAGAGTTAGTATaGAGCAAAAAGAACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRISPELV*SKKNRN Trigger: GTTCCTGTTCTTTTTGCTGCATACTAACTCTGGGCT...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGACCTTTTGGGATAATATaGGAAAAGCTCCCAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERPFGII*EKLPNG Trigger: CCCATTTGGGAGCTTTTCCCATATTATCCCAAAAGG...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATGGCATTGCATGAAATaGTGCACACATATGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRIWHCMK*CTHMNS Trigger: GCTGTTCATATGTGTGCACCATTTCATGCAATGCCA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATTTAGGTGTTGGAGACTaGTTTGTGCATGTTTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDLGVGD*FVHVWY Trigger: ATACCAAACATGCACAAATCAGTCTCCAACACCTAA...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATCCTTCTAATAGACTGTaGATACCAATAAAAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDPSNRL*IPIKGN Trigger: GTTGCCTTTTATTGGTATGCACAGTCTATTAGAAGG...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGATCAAAGGTAGCCTTTTaGGATAATATGGGAAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERSKVAF*DNMGKA Trigger: AGCTTTTCCCATATTATCCCAAAAGGCTACCTTTGA...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAATCTGATGCCCTCTTCTaGCTTTGGTTGGCATTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HAQTLAQRILLFSISKTKSDALF*LWLALH Trigger: ATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGA...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGATTGGAGACTGATTTGTaGATGTTTGGTATATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: AIPVNLSTAERPESTDERLETDL*MFGICS Trigger: AGAACATATACCAAACATGCACAAATCAGTCTCCAA...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATTACTTTTTCCATGATTaGACTATTTTCACAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PVLLSDELGLVILTLWRDYFFHD*TIFTGE Trigger: CTCTCCTGTGAAAATAGTGCAATCATGGAAAAAGTA...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAATATATGTTCTACCACTaGGCCACATATGGCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: HAQTLAQRILLFSISKTKYMFYH*ATYGLW Trigger: CCAAAGGCCATATGTGGCCCAGTGGTAGAACATATA...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR-3UTR CCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATACTTTTTAGCTTGACCTaGATAATGTTACATGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SLLVSACSKHAQTLAQRILFSLT*IMLHVF Trigger: GAACACATGTAACATTATCCAGGTCAAGCTAAAAAG...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CCA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAATCTTCTGGCTTTGGTTaGCATTGCATGAAATGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HAQTLAQRILLFSISKTKSSGFG*HCMKWC Trigger: GCACCATTTCATGCAATGCCAACCAAAGCCAGAAGA...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | ACCCTTGGCTGTTCTGGAACAGCCTCCTCTGCCTCCTaGTTGCTGGGATTAACCATTACCTGGTTCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TLGCSGTASSAS*LLGLTITWFPS Trigger: GGATGGGAACCAGGTAATGGTTAATCCCAGCAACCAGGAGGCAGAGGAGGCTGTTCCAGAACAGCCAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATTaGATGCCCTACTGGAAAGAATTGATGTTAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSGVAARVPRWN*MPYWKELMLMC Trigger: GCACATTAACATCAATTCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATaGAATTGGATGCCCTACTGGAAAGAATTGATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VAGSGVAARVPR*NWMPYWKELML Trigger: TAACATCAATTCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | TCTCATAACTCAGGAGGCAGAGCTGGGCAGATCTCTTaGGTTAGGCCAGCCTTGTCTAGACAGGAGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SHNSGGRAGQIS*VRPALSRQEFP Trigger: TGGGAACTCCTGTCTAGACAAGGCTGGCCTAACTCAAGAGATCTGCCCAGCTCTGCCTCCTGAGTTATGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | TCTCTGTACCCTTGGCTGTTCTGGAACAGCCTCCTCTaGCTCCTGGTTGCTGGGATTAACCATTACCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLYPWLFWNSLL*LLVAGINHYLV Trigger: AACCAGGTAATGGTTAATCCCAGCAACCAGGAGGCAGAGGAGGCTGTTCCAGAACAGCCAAGGGTACAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | TCTAGTCTAAAGCCTTTACTGCAACAGGCCTCTGACTaGACCTCCCTGCTAGACCTGAGACCAAAGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLKPLLQQASD*TSLLDLRPKLV Trigger: GACCAGCTTTGGTCTCAGGTCTAGCAGGGAGGTCCAGTCAGAGGCCTGTTGCAGTAAAGGCTTTAGACTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTTGTCTAGACAGGAGTTCCCAGAGCCCAAAGTCTTCTACGGACTGGTTGGAGCCAGGAATCATTaGAGAAGCCTTTGCACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PALSRQEFPEPKVFYGLVGARNH*RSLCTR Trigger: TCTAGTGCAAAGGCTTCTCAAATGATTCCTGGCTCC...AACCAGTCCGTAGAAGACTTTGGGCTCTGGGAACTCCTGTCTAGACAAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GACAGGAGTTCCCAGAGCCCAAAGTCTTCTACGGACTaGTTTGTTTCTAGGTGCCTTTCTAAGCCCCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: DRSSQSPKSSTD*FVSRCLSKPHC Trigger: GCAATGGGGCTTAGAAAGGCACCTAGAAACAAACCAGTCCGTAGAAGACTTTGGGCTCTGGGAACTCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GCAGCCCGGGTGCCCAGATGGAATTGGATGCCCTACTaGAAAGAATTGATGTTAATGTGCATGTCTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AARVPRWNWMPY*KELMLMCMSVP Trigger: TGGGACAGACATGCACATTAACATCAATTCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | CAGAATGGCCCTGAAGCTCACAGCCCAGAGTTAGTATaGAGCAAAAAGAACAGGAACTCCTCCCTACCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QNGPEAHSPELV*SKKNRNSSLPQ Trigger: TTGAGGTAGGGAGGAGTTCCTGTTCTTTTTGCTGCATACTAACTCTGGGCTGTGAGCTTCAGGGCCATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | AGTAACTCCTGTTCCAGGGGATCTGATGCCCTCTTCTaGCTTTGGTTGGCATTGCATGAAATGGTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: SNSCSRGSDALF*LWLALHEMVHT Trigger: TGTGTGCACCATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAGGAGTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | TCCTGTTCCAGGGGATCTGATGCCCTCTTCTGGCTTTaGTTGGCATTGCATGAAATGGTGCACACATATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCSRGSDALFWL*LALHEMVHTYE Trigger: TTCATATGTGTGCACCATTTCATGCAATGCCAACCAAAGCCAGAAGAGGGCATCAGATCCCCTGGAACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATCCTCTGCCTCCTGGTaGCTGGGATTAACCATTACC | + |
|
Preference number: 3 (lower is better) Translates to: SLLVSACSKHAQTLAQRISSASW*LGLTIT Trigger: GGTAATGGTTAATCCCAGCAACCAGGAGGCAGAGGA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATAGTTAAATTCCCAGCATaGTGTGGAGGCTCAGCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLVSACSKHAQTLAQRIVKFPA*CGGSAS Trigger: ACTGGCTGAGCCTCCACACAATGCTGGGAATTTAAC...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | TGGGAAAAGCTCCCAAATGGGGAGCCAGGAATCATTTaGGAAGCCTTTGCACTAGAATGGAGAAGCCATAAC | + |
|
Preference number: 3 (lower is better) Translates to: WEKLPNGEPGII*EAFALEWRSHN Trigger: GTTATGGCTTCTCCATTCTAGTGCAAAGGCTTCTCAAATGATTCCTGGCTCCCCATTTGGGAGCTTTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | AACACCTATCAACTTCATTCCCTCCACCAGTGGACTTaGTCTAGTCTAAAGCCTTTACTGCAACAGGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NTYQLHSLHQWT*SSLKPLLQQAS Trigger: AGAGGCCTGTTGCAGTAAAGGCTTTAGACTAGACCAAGTCCACTGGTGGAGGGAATGAAGTTGATAGGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATTGGCTTTGGTTGGCATaGCATGAAATGGTGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PVLLSDELGLVILTLWRDWLWLA*HEMVHT Trigger: TGTGTGCACCATTTCATGCAATGCCAACCAAAGCCA...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | ATTTCTTTAAAGGATAAGCCCTTGGGGTTGGAGAGATaGTTCTGCAGTCGTAACGACTGCTTTTTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISLKDKPLGLER*FCSRNDCFFQG Trigger: CCCCTGGAAAAAGCAGTCGTTACGACTGCAGAATCATCTCTCCAACCCCAAGGGCTTATCCTTTAAAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | GACCTGAAAGTACAGATGAGAGAAACAGAATGGCCCTaGAGCTCACAGCCCAGAGTTAGTATGCAGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLKVQMRETEWP*SSQPRVSMQQK Trigger: TTTTTGCTGCATACTAACTCTGGGCTGTGAGCTTCAGGGCCATTCTGTTTCTCTCATCTGTACTTTCAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | CTTCGTTCACCCTGGTTTTGTCTTCTGTCCACTGAATaGTGGCAATACCTGTTAATCTCAGCACTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRSPWFCLLSTE*WQYLLISALLR Trigger: TCTCAGCAGTGCTGAGATTAACAGGTATTGCCATCATTCAGTGGACAGAAGACAAAACCAGGGTGAACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | AGAGCTTCGTTCACCCTGGTTTTGTCTTCTGTCCACTaGATGATGGCAATACCTGTTAATCTCAGCACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RASFTLVLSSVH*MMAIPVNLSTA Trigger: AGCAGTGCTGAGATTAACAGGTATTGCCATCATTCAGTGGACAGAAGACAAAACCAGGGTGAACGAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | CATGATTGCACTATTTTCACAGGAGAGGTAGAGGTATaGGCAGGTTACCAAGGGGGCCTAGAATACCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HDCTIFTGEVEV*AGYQGGLEYQT Trigger: TGTTTGGTATTCTAGGCCCCCTTGGTAACCTGCTCATACCTCTACCTCTCCTGTGAAAATAGTGCAATCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GTAGCCTTTTGGGATAATATGGGAAAAGCTCCCAAATaGGGAGCCAGGAATCATTTGAGAAGCCTTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: VAFWDNMGKAPK*GARNHLRSLCT Trigger: AGTGCAAAGGCTTCTCAAATGATTCCTGGCTCCCCATTTGGGAGCTTTTCCCATATTATCCCAAAAGGCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATGGAGAAGCCATAACTaGGGTCTGTGGAATTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLLVSACSKHAQTLAQRIWRSHN*GLWNLG Trigger: ACCTAAATTCCACAGACCCAAGTTATGGCTTCTCCA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | TACCCCACTGTCTGTTCACACTTGGCACCAAACACTTaGATTACAACTCATGGAAACCTTGAAGTCTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: YPTVCSHLAPNT*ITTHGNLEVYL Trigger: CAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGTGTTTGGTGCCAAGTGTGAACAGACAGTGGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | TCACTAATAAGATTTCACGTGAACTTGTTAGGCCTTTaGTCCCAGGCCTATTTAAGACAGGGATCTAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLIRFHVNLLGL*SQAYLRQGSRG Trigger: ACCCCTAGATCCCTGTCTTAAATAGGCCTGGGATCAAAGGCCTAACAAGTTCACGTGAAATCTTATTAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | AGAATTCTTAGTTTGTCTAGCTTTGGCCACTGGAGATaGGTAGGGCTGTTTGGTGGGTTAACTTTAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: RILSLSSFGHWR*VGLFGGLTLVT Trigger: TGTAACTAAAGTTAACCCACCAAACAGCCCTACGCATCTCCAGTGGCCAAAGCTAGACAAACTAAGAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | CATAACTTGGGTCTGTGGAATTTAGGTGTTGGAGACTaGTTTGTGCATGTTTGGTATATGTTCTACCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HNLGLWNLGVGD*FVHVWYMFYHW Trigger: CCAGTGGTAGAACATATACCAAACATGCACAAATCAGTCTCCAACACCTAAATTCCACAGACCCAAGTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | AACTCTGGAGTTTGTCTTCAAGCTTCTGTGCAGACATaGACCCGTGTTTATATTCACACAATACGATCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSGVCLQASVQT*TRVYIHTIRSS Trigger: TGAAGATCGTATTGTGTGAATATAAACACGGGTGCATGTCTGCACAGAAGCTTGAAGACAAACTCCAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | AGAAACAGAACTCTGGAGTTTGTCTTCAAGCTTCTGTaGAGACATGCACCCGTGTTTATATTCACACAATAC | + |
|
Preference number: 3 (lower is better) Translates to: RNRTLEFVFKLL*RHAPVFIFTQY Trigger: GTATTGTGTGAATATAAACACGGGTGCATGTCTGCACAGAAGCTTGAAGACAAACTCCAGAGTTCTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR GCA 72 bp | AATTGGATGCCCTACTGGAAAGAATTGATGTTAATGTaGATGTCTGTCCCAGTGCTGTTAAGTGATGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NWMPYWKELMLM*MSVPVLLSDEL Trigger: TAGCTCATCACTTAACAGCACTGGGACAGACATGCACATTAACATCAATTCTTTCCAGTAGGGCATCCAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | GCTGTTTGGTGGGTTAACTTTAGTTACAACCAGGATTaGAAGGTGCTTTTAGATAGTCTTTTGTGTAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AVWWVNFSYNQD*KVLLDSLLCSW Trigger: CCAGCTACACAAAAGACTATCTAAAAGCACCTTCCAATCCTGGTTGTAACTAAAGTTAACCCACCAAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR TCA 72 bp | GCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATTCTaGCATACAGTTTTCATCATCACTAATAAGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ARSCYSHFVEGF*HTVFIITNKKL Trigger: CAGCTTCTTATTAGTGATGATGAAAACTGTATGTCAGAATCCCTCCACAAAGTGAGAATAACAAGACCTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | TACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTaGCTCAGAGAATATTACTTTTCAGTATCTCTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YLSQHAQSMHKH*LREYYFSVSLR Trigger: TCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | AGTGTTGGACCTTGGTTTCTACCATGTTTGAATTACTaGAGTTTACAACTCAGAGTTCTGGGAGCTTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SVGPWFLPCLNY*SLQLRVLGAFN Trigger: ATTAAAAGCTCCCAGAACTCTGAGTTGTAAACTCCAGTAATTCAAACATGGTAGAAACCAAGGTCCAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CCA 72 bp | TTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTaGAGGGATTCTGACATACAGTTTTCATCATCACTA | + |
|
Preference number: 3 (lower is better) Translates to: LSDELGLVILTL*RDSDIQFSSSL Trigger: TAGTGATGATGAAAACTGTATGTCAGAATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR TCA 90 bp | GATAGTCTTTTGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAAGTTCTGGCTGTACTCTaGGCAGGGACACTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSLLCSWFRGGSPGAQMEVLAVL*AGTLAA Trigger: TGCAGCCAGTGTCCCTGCTCAGAGTACAGCCAGAAC...TTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATTGGATGCCCTACTGGAAAGAGTCAGCACACTGCCATaGAAAGCATCCAGCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRGGSPGAQMELDALLERVSTLP*KASSTP Trigger: CGGAGTGCTGGATGCTTTGCATGGCAGTGTGCTGAC...TCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATTGGATGCCCTACTGGAAAGAATTTCCTTCAAGGCCTaGAGGAGGGAGTCCTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRGGSPGAQMELDALLERISFKA*RRESLQ Trigger: CTGCAAGGACTCCCTCCTCCAGGCCTTGAAGGAAAT...TCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR GCA 90 bp | GATAGTCTTTTGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATCTTCTTTAGTCGTTTaGAGCTGCTCAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSLLCSWFRGGSPGAQMESSLVV*SCSASS Trigger: GGAGCTGGCTGAGCAGCTGCAAACGACTAAAGAAGA...TTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CAA 72 bp | TGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAATaGGATGCCCTACTGGAAAGAATTGATGTTAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WFRGGSPGAQME*DALLERIDVNV Trigger: CACATTAACATCAATTCTTTCCAGTAGGGCATCCAATTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CAA 72 bp | TACAACCAGGATTGGAAGGTGCTTTTAGATAGTCTTTaGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YNQDWKVLLDSL*CSWFRGGSPGA Trigger: GGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATCTAAAAGCACCTTCCAATCCTGGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR GCA 90 bp | TGCAGTCGTAACGACTGCTTTTTCCAGGGGAAACCCATGTTAAATTCCCAGCATGACACTGGCTGCAGCTaGCACAGCTCCAGACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSRNDCFFQGKPMLNSQHDTGCS*HSSRLF Trigger: GAAGAGTCTGGAGCTGTGGCAGCTGCAGCCAGTGTC...ATGCTGGGAATTTAACATGGGTTTCCCCTGGAAAAAGCAGTCGTTACGACTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR CCA 90 bp | TCCATAGGTAGGACCATAAATAACACTTGGAAGAGTAGCTACTGGACTGGGGATTCTGAGCAGGGACACTaGCTGCAGCTGCCACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIGRTINNTWKSSYWTGDSEQGH*LQLPQL Trigger: GAGCTGTGGCAGCTGCAGCCAGTGTCCCTGCTCAGA...ATCCCCAGTCCAGTAGCTACTCTTCCAAGTGTTATTTATGGTCCTACCTATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CAA 72 bp | CTTTTTCCAGGGGAAACCCATGTTAAATTCCCAGCATaGTGTGGAGGCTCAGCCAGTAACTCCTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPGETHVKFPA*CGGSASNSCSR Trigger: CCTGGAACAGGAGTTACTGGCTGAGCCTCCACACAATGCTGGGAATTTAACATGGGTTTCCCCTGGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| 3UTR CAA 72 bp | TTGAGACTGCTGGTGACAAGTCTAGCTTCTGTCAGTTaGTTAGTGCCTAAAACAGCTGTTGTGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLVTSLASVS*LVPKTAVVALG Trigger: GCCCAGAGCCACAACAGCTGTTTTAGGCACTAACAAACTGACAGAAGCTAGACTTGTCACCAGCAGTCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGAGAGACCTGAAAGTACAGATGAGAGAAACAGAATGGCCCTGAAGCTCAGGATGGAACAAAGCTaGAGAGCTTCCTCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAERPESTDERNRMALKLRMEQS*RASSSC Trigger: ACAAGATGAGGAAGCTCTTCAGCTTTGTTCCATCCT...GAGCTTCAGGGCCATTCTGTTTCTCTCATCTGTACTTTCAGGTCTCTCAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR GCA 90 bp | AGTCTACTTGTCTCAGCATGCTCAAAGCATGCACAAACACTGGCTCAGAGAATATTAGTCGTTTGCAGCTaGTCAGCCAGCTCCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLVSACSKHAQTLAQRILVVCS*SASSCK Trigger: CTTACAGGAGCTGGCTGAGCAGCTGCAAACGACTAA...TATTCTCTGAGCCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
||
| CDS-3UTR CCA 90 bp | TCCATAGGTAGGACCATAAATAACACTTGGAAGAGTAGCTACTGGACTGGGGATTCATCTTGTCTTGGCTaGTGGTCTCTGCACGAACTG | + |
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Preference number: 4 (lower is better) Translates to: SIGRTINNTWKSSYWTGDSSCLG*WSLHEL Trigger: CAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGA...ATCCCCAGTCCAGTAGCTACTCTTCCAAGTGTTATTTATGGTCCTACCTATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 72 bp | GTGGAATTTAGGTGTTGGAGACTGATTTGTGCATGTTaGGTATATGTTCTACCACTGGGCCACATATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VEFRCWRLICAC*VYVLPLGHIWP Trigger: AGGCCATATGTGGCCCAGTGGTAGAACATATACCAAACATGCACAAATCAGTCTCCAACACCTAAATTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 72 bp | TGGCACCAAACACTTGGATTACAACTCATGGAAACCTaGAAGTCTACTTGTCTCAGCATGCTCAAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: WHQTLGLQLMET*KSTCLSMLKAC Trigger: GCATGCTTTGAGCATGCTGAGACAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGTGTTTGGTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| 3UTR CAA 72 bp | ACTTGGATTACAACTCATGGAAACCTTGAAGTCTACTaGTCTCAGCATGCTCAAAGCATGCACAAACACTGG | + |
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Preference number: 4 (lower is better) Translates to: TWITTHGNLEVY*SQHAQSMHKHW Trigger: CCAGTGTTTGTGCATGCTTTGAGCATGCTGAGACAAGTAGACTTCAAGGTTTCCATGAGTTGTAATCCAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS-3UTR GCA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAACTTCAGTCAGCACACTaGCATGCAAAGCATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HAQTLAQRILLFSISKTKLQSAH*HAKHPA Trigger: TGCTGGATGCTTTGCATGGCAGTGTGCTGACTGAAG...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS GCA 90 bp | GTGTCCTGTTCTGGCTGTACTCTGAGCAGGGACACTGGCTGCAGCTaGCACAGCTCCAGACTCTTCTTTAGTCGTTTGCAGCTGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VSCSGCTLSRDTGCS*HSSRLFFSRLQLLS Trigger: GCTGAGCAGCTGCAAACGACTAAAGAAGAGTCTGGAGCTGTGGCAGCTGCAGCCAGTGTCCCTGCTCAGAGTACAGCCAGAACAGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS-3UTR CAA 90 bp | GATAGTCTTTTGTGTAGCTGGTTCAGGGGTGGCAGCCCGGGTGCCCAGATGGAACTTCCTCATCTTGTCTaGGCTGGTGGTCTCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: DSLLCSWFRGGSPGAQMELPHLV*AGGLCT Trigger: CGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAG...TTCCATCTGGGCACCCGGGCTGCCACCCCTGAACCAGCTACACAAAAGACTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS GCA 90 bp | TCTGCACGAACTGCCTGGTACTGTCCTTCAGTCAGCACACTGCCATaGAAAGCATCCAGCACTCCGTCCACTTCTGTGACCCTGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SARTAWYCPSVSTLP*KASSTPSTSVTLAM Trigger: CATTGCCAGGGTCACAGAAGTGGACGGAGTGCTGGATGCTTTGCATGGCAGTGTGCTGACTGAAGGACAGTACCAGGCAGTTCGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS TCA 90 bp | GGAGGAGGGAGTCCTTGCAGGTCAGGTTCCAGGATGGAACAAAGCTaGAGAGCTTCCTCATCTTGTCTTGGCTGGTGGTCTCTGCACGAA | + |
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Preference number: 5 (lower is better) Translates to: GGGSPCRSGSRMEQS*RASSSCLGWWSLHE Trigger: TTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTCAGCTTTGTTCCATCCTGGAACCTGACCTGCAAGGACTCCCTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 90 bp | ACACTGGCTGCAGCTGCCACAGCTCCAGACTCTTCTTTAGTCGTTTaGAGCTGCTCAGCCAGCTCCTGTAAGCCCATGTCTCTAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TLAAAATAPDSSLVV*SCSASSCKPMSLST Trigger: TGTGCTTAGAGACATGGGCTTACAGGAGCTGGCTGAGCAGCTGCAAACGACTAAAGAAGAGTCTGGAGCTGTGGCAGCTGCAGCCAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 90 bp | CACAAAGTGTCCTGTTCTGGCTGTACTCTGAGCAGGGACACTGGCTaGAGCTGCCACAGCTCCAGACTCTTCTTTAGTCGTTTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: HKVSCSGCTLSRDTG*SCHSSRLFFSRLQL Trigger: CAGCTGCAAACGACTAAAGAAGAGTCTGGAGCTGTGGCAGCTGCAGCCAGTGTCCCTGCTCAGAGTACAGCCAGAACAGGACACTTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 90 bp | GAAGAGCTTCCTCATCTTGTCTTGGCTGGTGGTCTCTGCACGAACTaGCTGGTACTGTCCTTCAGTCAGCACACTGCCATGCAAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: EELPHLVLAGGLCTN*LVLSFSQHTAMQSI Trigger: GATGCTTTGCATGGCAGTGTGCTGACTGAAGGACAGTACCAGGCAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 90 bp | AACAAAGCTGAAGAGCTTCCTCATCTTGTCTTGGCTGGTGGTCTCTaGACGAACTGCCTGGTACTGTCCTTCAGTCAGCACACTGCCATG | + |
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Preference number: 5 (lower is better) Translates to: NKAEELPHLVLAGGL*TNCLVLSFSQHTAM Trigger: CATGGCAGTGTGCTGACTGAAGGACAGTACCAGGCAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTCAGCTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS-3UTR CAA 90 bp | GCAATACCTGTTAATCTCAGCACTGCTGAGAGACCTGAAAGTACAGATGAGAGAATAGCCTTCTCGCAGTaGCACTGTCAGCAGCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: AIPVNLSTAERPESTDERIAFSQ*HCQQLH Trigger: ATGAAGCTGCTGACAGTGCAACTGCGAGAAGGCTAT...TCTCTCATCTGTACTTTCAGGTCTCTCAGCAGTGCTGAGATTAACAGGTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS-3UTR CAA 90 bp | CCAGTGCTGTTAAGTGATGAGCTAGGTCTTGTTATTCTCACTTTGTGGAGGGATAAGAGCTTCCTCATCTaGTCTTGGCTGGTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVLLSDELGLVILTLWRDKSFLI*SWLVVS Trigger: AGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTT...ATCCCTCCACAAAGTGAGAATAACAAGACCTAGCTCATCACTTAACAGCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS-3UTR CAA 90 bp | CATGCACAAACACTGGCTCAGAGAATATTACTTTTCAGTATCTCTAAGACGAAATTCATCTTGAACTTTTaGAGTTCATCCCCTGACAAG | + |
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Preference number: 5 (lower is better) Translates to: HAQTLAQRILLFSISKTKFILNF*SSSPDK Trigger: CTTGTCAGGGGATGAACTCAAAAAGTTCAAGATGAA...TTTCGTCTTAGAGATACTGAAAAGTAATATTCTCTGAGCCAGTGTTTGTGCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS GCA 72 bp | CTATGGCGTCCATCTGCAGCAGGGCCCCGCGTGGGATaGGCCCATAGCCTTCTCGCAGTTGCACTGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LWRPSAAGPRVG*AHSLLAVALSA Trigger: TGCTGACAGTGCAACTGCGAGAAGGCTATGGGCGCATCCCACGCGGGGCCCTGCTGCAGATGGACGCCATAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033056.5 |
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| CDS CAA 90 bp | AGCATCCAGCACTCCGTCCACTTCTGTGACCCTGGCAATGAGTGCTaGCCTGTGCTGGTCCACAAAGTGTCCTGTTCTGGCTGTACTCTG | + |
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Preference number: 6 (lower is better) Translates to: SIQHSVHFCDPGNEC*PVLVHKVSCSGCTL Trigger: CAGAGTACAGCCAGAACAGGACACTTTGTGGACCAGCACAGGCAAGCACTCATTGCCAGGGTCACAGAAGTGGACGGAGTGCTGGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 72 bp | GCAGCTGCCACAGCTCCAGACTCTTCTTTAGTCGTTTaGAGCTGCTCAGCCAGCTCCTGTAAGCCCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: AAATAPDSSLVV*SCSASSCKPMS Trigger: AGACATGGGCTTACAGGAGCTGGCTGAGCAGCTGCAAACGACTAAAGAAGAGTCTGGAGCTGTGGCAGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 72 bp | CAGCACTCCGTCCACTTCTGTGACCCTGGCAATGAGTaGTTGCCTGTGCTGGTCCACAAAGTGTCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: QHSVHFCDPGNE*LPVLVHKVSCS Trigger: AGAACAGGACACTTTGTGGACCAGCACAGGCAAGCACTCATTGCCAGGGTCACAGAAGTGGACGGAGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 72 bp | ACTGCCTGGTACTGTCCTTCAGTCAGCACACTGCCATaGAAAGCATCCAGCACTCCGTCCACTTCTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: TAWYCPSVSTLP*KASSTPSTSVT Trigger: GGTCACAGAAGTGGACGGAGTGCTGGATGCTTTGCATGGCAGTGTGCTGACTGAAGGACAGTACCAGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 72 bp | CACGAACTGCCTGGTACTGTCCTTCAGTCAGCACACTaGCATGCAAAGCATCCAGCACTCCGTCCACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HELPGTVLQSAH*HAKHPALRPLL Trigger: CAGAAGTGGACGGAGTGCTGGATGCTTTGCATGGCAGTGTGCTGACTGAAGGACAGTACCAGGCAGTTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS GCA 72 bp | GAAGAGCTTCCTCATCTTGTCTTGGCTGGTGGTCTCTaGACGAACTGCCTGGTACTGTCCTTCAGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: EELPHLVLAGGL*TNCLVLSFSQH Trigger: GTGCTGACTGAAGGACAGTACCAGGCAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS CAA 90 bp | CAGGTCAGGTTCCAGGATGGAACAAAGCTGAAGAGCTTCCTCATCTaGTCTTGGCTGGTGGTCTCTGCACGAACTGCCTGGTACTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: QVRFQDGTKLKSFLI*SWLVVSARTAWYCP Trigger: AGGACAGTACCAGGCAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTCAGCTTTGTTCCATCCTGGAACCTGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS CAA 72 bp | TTCCAGGATGGAACAAAGCTGAAGAGCTTCCTCATCTaGTCTTGGCTGGTGGTCTCTGCACGAACTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FQDGTKLKSFLI*SWLVVSARTAW Trigger: CCAGGCAGTTCGTGCAGAGACCACCAGCCAAGACAAGATGAGGAAGCTCTTCAGCTTTGTTCCATCCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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| CDS TCA 72 bp | AGTCCTTGCAGGTCAGGTTCCAGGATGGAACAAAGCTaGAGAGCTTCCTCATCTTGTCTTGGCTGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SPCRSGSRMEQS*RASSSCLGWWS Trigger: AGACCACCAGCCAAGACAAGATGAGGAAGCTCTTCAGCTTTGTTCCATCCTGGAACCTGACCTGCAAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033056.5 ENSMUST00000205594.2 |
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