Pregenerated sensors for PXYLP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043587Ensembl transcript IDs: ENSMUST00000078478.8, ENSMUST00000112951.9, ENSMUST00000119141.8, ENSMUST00000120101.8, ENSMUST00000121077.8, ENSMUST00000124923.2, ENSMUST00000126411.8, ENSMUST00000154146.8
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAACGTGTTCGAGTGCAACACCAGACACAAAGGAAGAGAAAGGCTaGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: KTCSSATPDTKEEKG*NAEAGEPTCMGHVC Trigger: GCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCCTTTCTCTTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR TCA 90 bp | GTTCCATGGCAGGTCAAAAGTTATATAAGGTTGGCTGTTGAGTACTaGGCCTTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACG | + |
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Preference number: 1 (lower is better) Translates to: VPWQVKSYIRLAVEY*ALCWHSKLHTAMKT Trigger: CGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAAGGCTCAGTACTCAACAGCCAACCTTATATAACTTTTGACCTGCCATGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR TCA 90 bp | GAACAGGTCATTATTTATTTTTGGAGGGAAAACGAGTGTCTGAATTaGGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGCAGTAAACCG | + |
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Preference number: 1 (lower is better) Translates to: EQVIIYFWRENECLN*ALASFQPPSRCSKP Trigger: CGGTTTACTGCACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCCCTCCAAAAATAAATAATGACCTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR TCA 90 bp | AAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGAGTGTCTaGATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: KGNRSLFIFGGKTSV*IELWPPSNHQAGAV Trigger: TACTGCACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACACAGCTGAGAAGATATaGCAGAGATTCTCTGTGACC | + |
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Preference number: 2 (lower is better) Translates to: ADTAREPELAATHSVCSHTAEKI*QRFSVT Trigger: GGTCACAGAGAATCTCTGTCATATCTTCTCAGCTGT...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGAACGAGTGTCTGAATTaGGCTTTGGCCTCCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTNECLN*ALASFQ Trigger: TTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTT...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGACCTTCTTTCCTCTGTaGACCGGCTATTTTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTTFFPL*TGYFVP Trigger: TGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGT...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCTTGGCTGTTGAGTACTaGGCCTTATGCTGGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: VPLGVLPRQIQTQRCASSLAVEY*ALCWHS Trigger: AGAGTGCCAGCATAAGGCTCAGTACTCAACAGCCAA...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGACAGAGATTCTCTGTaGCCTTTAGGTCTACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: MSQQTRPESPSWLPLTLFDRDSL*PLGLQS Trigger: GCTCTGTAGACCTAAAGGTCACAGAGAATCTCTGTC...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTGACAGAGATTCTCTGTaGCCTTTAGGTCTACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: AFKDESADTAREPELAATDRDSL*PLGLQS Trigger: GCTCTGTAGACCTAAAGGTCACAGAGAATCTCTGTC...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCCACCAGAGCACAGCTaGGAAGATATGACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: AFKDESADTAREPELAATPPEHS*EDMTEI Trigger: AATCTCTGTCATATCTTCTCAGCTGTGCTCTGGTGG...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCCCACCAGAGCACAGCTaGGAAGATATGACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: VPLGVLPRQIQTQRCASSPPEHS*EDMTEI Trigger: AATCTCTGTCATATCTTCTCAGCTGTGCTCTGGTGG...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTTTTTTGGCAGAGGTTTaGTGGTTCCATGGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: AFKDESADTAREPELAATFLAEV*WFHGRS Trigger: TGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAA...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACCACCAGAGCACAGCTaGGAAGATATGACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: FPWACYHVRYRPNAVLLAPPEHS*EDMTEI Trigger: AATCTCTGTCATATCTTCTCAGCTGTGCTCTGGTGG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGATTTTTGGCAGAGGTTTaGTGGTTCCATGGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRFLAEV*WFHGRS Trigger: TGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAA...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAGCCACTCACTCTGTTTaGTCACACATGGCCACTTAT | + |
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Preference number: 2 (lower is better) Translates to: FPWACYHVRYRPNAVLLAATHSV*SHMATY Trigger: ATAAGTGGCCATGTGTGAGCAAACAGAGTGAGTGGC...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGAAAGCCAAGCACACTGTaGACTCATCACTCTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRKPSTL*THHSGK Trigger: TTTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTT...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGTTTTTGGCAGAGGTTTaGTGGTTCCATGGCAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GKRVSELSFGLLPTTKQVFLAEV*WFHGRS Trigger: TGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAA...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGGCCACTCACTCTGTTTaGTCACACATGGCCACTTAT | + |
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Preference number: 2 (lower is better) Translates to: GKRVSELSFGLLPTTKQVATHSV*SHMATY Trigger: ATAAGTGGCCATGTGTGAGCAAACAGAGTGAGTGGC...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGACCTTCTTTCCTCTGTaGACCGGCTATTTTGTACCA | + |
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Preference number: 2 (lower is better) Translates to: GKRVSELSFGLLPTTKQVTFFPL*TGYFVP Trigger: TGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGAAGCCAAGCACACTGTaGACTCATCACTCTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: GKRVSELSFGLLPTTKQVKPSTL*THHSGK Trigger: TTTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGACAGCTGAGAAGATATaGCAGAGATTCTCTGTGACC | + |
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Preference number: 2 (lower is better) Translates to: GKRVSELSFGLLPTTKQVTAEKI*QRFSVT Trigger: GGTCACAGAGAATCTCTGTCATATCTTCTCAGCTGT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAAGTGAACTCATCACTCTaGAAAATTTTCCACTCGACG | + |
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Preference number: 2 (lower is better) Translates to: FRSTEPKILTFWSPPPEKVNSSL*KIFHST Trigger: CGTCGAGTGGAAAATTTTCCAGAGTGATGAGTTCAC...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCTGGCCTTCAAAGTGCTaGAAGCACAGCGGTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RQVSKTHLKLFCATILTSWPSKC*KHSGSG Trigger: GCCTGAACCGCTGTGCTTCCAGCACTTTGAAGGCCA...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR CAA 90 bp | CACGGCCATGAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTaGTACCAAGTAACATCCTGTTATGTGCTTCCTGTCTGTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: HGHENVPSFLCEPAI*YQVTSCYVLPVCLN Trigger: GTTGAGACAGACAGGAAGCACATAACAGGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTCATGGCCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGTGGCCTTCAAAGTGCTaGAAGCACAGCGGTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTWPSKC*KHSGSG Trigger: GCCTGAACCGCTGTGCTTCCAGCACTTTGAAGGCCA...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTTGGCTGTTGAGTACTaGGCCTTATGCTGGCACTCT | + |
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Preference number: 2 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRLAVEY*ALCWHS Trigger: AGAGTGCCAGCATAAGGCTCAGTACTCAACAGCCAA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCCCACCAGAGCACAGCTaGGAAGATATGACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: RQVSKTHLKLFCATILTSPPEHS*EDMTEI Trigger: AATCTCTGTCATATCTTCTCAGCTGTGCTCTGGTGG...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR CAA 90 bp | ACCCAGTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTaGGAGGGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQFYSLSKGTGHYLF*EGKRVSELSFGLLP Trigger: TGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAACTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCACCTTCTTTCCTCTGTaGACCGGCTATTTTGTACCA | + |
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Preference number: 2 (lower is better) Translates to: RQVSKTHLKLFCATILTSTFFPL*TGYFVP Trigger: TGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGT...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAATTCCTGCGTGCTTTCTaGCCTGGTGTTCGTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: MFISKNKTCSSATPDTKEFLRAF*PGVRSP Trigger: AGGGGAACGAACACCAGGTCAGAAAGCACGCAGGAA...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAAGAAAGGCTGGAATGCTaGAGCTGGAGAACCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: MFISKNKTCSSATPDTKEERLEC*SWRTHL Trigger: CAGGTGGGTTCTCCAGCTTCAGCATTCCAGCCTTTC...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAATGGCCTTCAAAGTGCTaGAAGCACAGCGGTTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: MFISKNKTCSSATPDTKEWPSKC*KHSGSG Trigger: GCCTGAACCGCTGTGCTTCCAGCACTTTGAAGGCCA...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCGTGAACTCATCACTCTaGAAAATTTTCCACTCGACG | + |
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Preference number: 2 (lower is better) Translates to: RQVSKTHLKLFCATILTSVNSSL*KIFHST Trigger: CGTCGAGTGGAAAATTTTCCAGAGTGATGAGTTCAC...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGAAGCCAAGCACACTGTaGACTCATCACTCTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTKPSTL*THHSGK Trigger: TTTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTT...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAACTTAAAGCTATTTTGTaGCACGATCCTCACGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: MFISKNKTCSSATPDTKELKAIL*HDPHEH Trigger: ATGCTCGTGAGGATCGTGGCACAAAATAGCTTTAAG...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR GCA 72 bp | GCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTaGTCACACATGGCCACTTATGCGTCGCCACACCAC | + |
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Preference number: 3 (lower is better) Translates to: AREPELAATHSV*SHMATYASPHH Trigger: GTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR CAA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACATTTTTGGCAGAGGTTaGCTGGTTCCATGGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ADTAREPELAATHSVCSHIFGRG*LVPWQV Trigger: GACCTGCCATGGAACCAGCAAACCTCTGCCAAAAAT...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGTGCCACTCACTCTGTTaGCTCACACATGGCCACTTA | + |
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Preference number: 3 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTCHSLC*LTHGHL Trigger: TAAGTGGCCATGTGTGAGCAAACAGAGTGAGTGGCA...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| 3UTR GCA 72 bp | GAGAAAGGCTGGAATGCTGAAGCTGGAGAACCCACCTaGATGGGCCATGTCTGCGGAACGAACAAGCACCGT | + |
|
Preference number: 3 (lower is better) Translates to: EKGWNAEAGEPT*MGHVCGTNKHR Trigger: ACGGTGCTTGTTCGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCCTTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGAAACGAGTGTCTGAATaGAGCTTTGGCCTCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTKRVSE*SFGLLP Trigger: TGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTT...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| 3UTR CCA 72 bp | ACCTTTAGGTCTACAGAGCCTAAGATACTGACCTTCTaGTCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TFRSTEPKILTF*SPPPEKGCQAK Trigger: CTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR CCA 72 bp | AAGGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATaGGCCATGTCTGCGGAACGAACAAGCACCGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: KAGMLKLENPPA*AMSAERTSTVN Trigger: GTTAACGGTGCTTGTTCGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGACACTTAAAGCTATTTaGTGCCACGATCCTCACGAG | + |
|
Preference number: 3 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTTLKAI*CHDPHE Trigger: CTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGT...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCAGATTAAGAAGATTTTaGGCAGAGGTTTGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESADTAREPELAATHSVCRLRRF*AEVCWF Trigger: GAACCAGCAAACCTCTGCCAAAAATCTTCTTAATCT...GCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR GCA 72 bp | CGATCCTCACGAGCATCAAGTACTGTAGTAATTTCCTaGGTGCTTTCTGACCTGGTGTTCGTTCCCCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSRASSTVVIS*VLSDLVFVPLG Trigger: GCCCAGGGGAACGAACACCAGGTCAGAAAGCACGCAGGAAATTACTACAGTACTTGATGCTCGTGAGGATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGATTTTTGGCAGAGGTTaGCTGGTTCCATGGCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GKRVSELSFGLLPTTKQVIFGRG*LVPWQV Trigger: GACCTGCCATGGAACCAGCAAACCTCTGCCAAAAAT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTAGATTAAGAAGATTTTaGGCAGAGGTTTGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSQQTRPESPSWLPLTLFRLRRF*AEVCWF Trigger: GAACCAGCAAACCTCTGCCAAAAATCTTCTTAATCT...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR TCA 72 bp | GCGTCGCCACACCACCAGAGCACAGCTGAGAAGATATaGCAGAGATTCTCTGTGACCTTTAGGTCTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASPHHQSTAEKI*QRFSVTFRSTE Trigger: CTCTGTAGACCTAAAGGTCACAGAGAATCTCTGTCATATCTTCTCAGCTGTGCTCTGGTGGTGTGGCGACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGGAAATGTGAACCGGCTATTTaGTACCAAGTAACATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPEKGCQAKHTVNSSLWKCEPAI*YQVTSC Trigger: ACAGGATGTTACTTGGTACAAAATAGCCGGTTCACA...TTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAAGATTAAGAAGATTTTaGGCAGAGGTTTGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPWACYHVRYRPNAVLLARLRRF*AEVCWF Trigger: GAACCAGCAAACCTCTGCCAAAAATCTTCTTAATCT...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAATGTGAACCGGCTATTTaGTACCAAGTAACATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FRSTEPKILTFWSPPPEKCEPAI*YQVTSC Trigger: ACAGGATGTTACTTGGTACAAAATAGCCGGTTCACA...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAAAGATTAAGAAGATTTTaGGCAGAGGTTTGCTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FRSTEPKILTFWSPPPEKRLRRF*AEVCWF Trigger: GAACCAGCAAACCTCTGCCAAAAATCTTCTTAATCT...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGTGCCACTCACTCTGTTaGCTCACACATGGCCACTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTCHSLC*LTHGHL Trigger: TAAGTGGCCATGTGTGAGCAAACAGAGTGAGTGGCA...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTGTGAACCGGCTATTTaGTACCAAGTAACATCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRCEPAI*YQVTSC Trigger: ACAGGATGTTACTTGGTACAAAATAGCCGGTTCACA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR CCA 72 bp | ATTAAGAAGATTTTTGGCAGAGGTTTGCTGGTTCCATaGCAGGTCAAAAGTTATATAAGGTTGGCTGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IKKIFGRGLLVP*QVKSYIRLAVE Trigger: CTCAACAGCCAACCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTTCTTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADTAREPELAATHSVCSHARSAG*GSSPCS Trigger: AGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGC...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACCGACTCCTGTCTGCGTaGGCTCTCCCGTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ADTAREPELAATHSVCSHRLLSA*ALPSHT Trigger: TGTGTGAGACGGGAGAGCTCACGCAGACAGGAGTCG...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATARSAG*GSSPCS Trigger: AGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGC...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTAGGGCTAGCCCGCTCTaGAGGGTGCGGCTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATRASPL*RVRLFP Trigger: GGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCT...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGCGACTCCTGTCTGCGTaGGCTCTCCCGTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTRLLSA*ALPSHT Trigger: TGTGTGAGACGGGAGAGCTCACGCAGACAGGAGTCG...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAAGGGCTAGCCCGCTCTaGAGGGTGCGGCTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLARASPL*RVRLFP Trigger: GGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCT...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCGGAAGAACTGCAGGCTaGGGCTCAGGAAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESADTAREPELAATHSVCGRTAG*GSGKPR Trigger: TCTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCC...GCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACGGAAGAACTGCAGGCTaGGGCTCAGGAAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADTAREPELAATHSVCSHGRTAG*GSGKPR Trigger: TCTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCC...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGTGCTGCAGGGGAAGCTaGCATTGTGGCAGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTCCRGS*HCGRSG Trigger: GCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCA...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACGGATGGGTGACAGGGTaGCGTCATGAGCAGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADTAREPELAATHSVCSHGWVTG*RHEQSR Trigger: TCTACTCTGCTCATGACGTCACCCTGTCACCCATCC...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGGCACTGAGGATGGGTaGCAGGGTGACGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSQQTRPESPSWLPLTLFGTEDG*QGDVMS Trigger: GCTCATGACGTCACCCTGTCACCCATCCTCAGTGCC...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGTGCACGACTCCTGTCTaGGTGAGCTCTCCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTCTTPV*VSSPVS Trigger: TGAGACGGGAGAGCTCACGCAGACAGGAGTCGTGCA...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCCCGTCTGATTTAGGATaGGGTGGGCCCCGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSPSDLG*GGPRGG Trigger: CCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGG...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGGGAAGAACTGCAGGCTaGGGCTCAGGAAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTGRTAG*GSGKPR Trigger: TCTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCC...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTGGCACTGAGGATGGGTaGCAGGGTGACGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATGTEDG*QGDVMS Trigger: GCTCATGACGTCACCCTGTCACCCATCCTCAGTGCC...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKRVSELSFGLLPTTKQVARSAG*GSSPCS Trigger: AGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGC...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACCGTCTGATTTAGGATaGGGTGGGCCCCGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAPSDLG*GGPRGG Trigger: CCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACGACTCCTGTCTGCGTaGGCTCTCCCGTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLARLLSA*ALPSHT Trigger: TGTGTGAGACGGGAGAGCTCACGCAGACAGGAGTCG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTTGCTGCAGGGGAAGCTaGCATTGTGGCAGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATCCRGS*HCGRSG Trigger: GCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCA...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCATGTCCCTCAGCAGCTaGCCATTCAGCAGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLMSLSS*PFSRCC Trigger: GCAGCATCTGCTGAATGGCCAGCTGCTGAGGGACAT...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCGGATGGGTGACAGGGTaGCGTCATGAGCAGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSGWVTG*RHEQSR Trigger: TCTACTCTGCTCATGACGTCACCCTGTCACCCATCC...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGTTCACTGGGCTTTTaGCGGTCTTGCCAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLCSLGF*RSCQSS Trigger: TGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACA...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSARSAG*GSSPCS Trigger: AGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGC...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAAAACCGGGTCTACGGTaGGAGGCTCTGTCACTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAKPGLR*EALSLG Trigger: ACCCAGTGACAGAGCCTCCCACCGTAGACCCGGTTT...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGCTGGCCGCTTTGTTTTaGGAATGGCATACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTLAALF*EWHTVG Trigger: ACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAG...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCCTTCCAGTCAAACTCTaGGAGGAAGCCGTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLLPVKL*EEAVEQ Trigger: CTGCTCTACGGCTTCCTCCCAGAGTTTGACTGGAAG...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTAGAAGTGGCAGAGCATaGAATCGATGGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATRSGRA*NRWGWP Trigger: CGGCCAACCCCATCGATTCCATGCTCTGCCACTTCT...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGGGAAGCTGACATTGTaGCAGAAGTGGCAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: MSQQTRPESPSWLPLTLFGKLTL*QKWQSM Trigger: CATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCC...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGCCGTCTGATTTAGGATaGGGTGGGCCCCGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRVSELSFGLLPTTKQVPSDLG*GGPRGG Trigger: CCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGG...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTTGTCCCCATGGCGAATaGACACATGAACGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATCPHGE*THERRP Trigger: TGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACA...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAACGACTCCTGTCTGCGTaGGCTCTCCCGTCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKRLLSA*ALPSHT Trigger: TGTGTGAGACGGGAGAGCTCACGCAGACAGGAGTCG...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCAGTGCAGTCGATTTCTaGCCGCTTTGTTTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESADTAREPELAATHSVCSAVDF*PLCFGN Trigger: ATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACT...GCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCCTTCCAGTCAAACTCTaGGAGGAAGCCGTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSLPVKL*EEAVEQ Trigger: CTGCTCTACGGCTTCCTCCCAGAGTTTGACTGGAAG...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAGGATGTCCACAATCTTaGCCATCTCCCCGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAGCPQS*PSPRRS Trigger: GGACCTACGGGGAGATGGCCAAGATTGTGGACATCC...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGAAGAAGTGGCAGAGCATaGAATCGATGGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRRSGRA*NRWGWP Trigger: CGGCCAACCCCATCGATTCCATGCTCTGCCACTTCT...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGATGTTCACTGGGCTTTTaGCGGTCTTGCCAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRCSLGF*RSCQSS Trigger: TGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACA...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATVLRYA*NVAVQK Trigger: CTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCAC...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSVLRYA*NVAVQK Trigger: CTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCAC...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGGAAAATGTCCCTCAGCAGCTaGCCATTCAGCAGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPEKGCQAKHTVNSSLWKMSLSS*PFSRCC Trigger: GCAGCATCTGCTGAATGGCCAGCTGCTGAGGGACAT...TTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGACTTCCAGTCAAACTCTaGGAGGAAGCCGTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRLPVKL*EEAVEQ Trigger: CTGCTCTACGGCTTCCTCCCAGAGTTTGACTGGAAG...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSQQTRPESPSWLPLTLFTLWQK*QSMESM Trigger: CATCGATTCCATGCTCTGCCACTTCTGCCACAATGT...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGAGGGAAGCTGACATTGTaGCAGAAGTGGCAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRGKLTL*QKWQSM Trigger: CATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCC...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCAGGGAAGCTGACATTGTaGCAGAAGTGGCAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAGKLTL*QKWQSM Trigger: CATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCC...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR CAA 72 bp | CAGACGTTACTGAAGGACCTGAAGAACAGCGGTCGTTaGGCCTTCAAAGTGCTGGAAGCACAGCGGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTLLKDLKNSGR*AFKVLEAQRFR Trigger: CCTGAACCGCTGTGCTTCCAGCACTTTGAAGGCCAAACGACCGCTGTTCTTCAGGTCCTTCAGTAACGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCCACTTGGCTGGTGCTTaGAATAAACCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLHLAGA*NKPSSS Trigger: ACTGGAAGAAGGTTTATTTCAAGCACCAGCCAAGTG...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAAGGATGGGTGACAGGGTaGCGTCATGAGCAGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKGWVTG*RHEQSR Trigger: TCTACTCTGCTCATGACGTCACCCTGTCACCCATCC...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTCCTCTTTCGACTCTTaGTGCTTCCTCCATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLSSFDS*CFLHSL Trigger: CAAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGA...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCAGGGCTAGCCCGCTCTaGAGGGTGCGGCTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSRASPL*RVRLFP Trigger: GGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCT...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTTTCCTCCATTCTTTGTaGCAGACACTGGGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSQQTRPESPSWLPLTLFFLHSL*QTLGSS Trigger: ACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAA...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGAGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRVLRYA*NVAVQK Trigger: CTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCAC...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACTGGCCGCTTTGTTTTaGGAATGGCATACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLALAALF*EWHTVG Trigger: ACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSTLWQK*QSMESM Trigger: CATCGATTCCATGCTCTGCCACTTCTGCCACAATGT...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGGAAAGGACCGAATGTTCACTaGGCTTTTGACGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPEKGCQAKHTVNSSLWKGPNVH*AFDGLA Trigger: GGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCC...TTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAATGGCAGAAGGAGGTGTaGAAGGTAACATCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKWQKEV*KVTSAP Trigger: CGGGGCTGATGTTACCTTCCACACCTCCTTCTGCCA...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTCACACGATCCTTTCAACATGTaGCTAATGAAAGCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADTAREPELAATHSVCSHDPFNM*LMKASS Trigger: ACTAGAAGCTTTCATTAGTCACATGTTGAAAGGATC...GTGTGAGCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTTGCACGACTCCTGTCTaGGTGAGCTCTCCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSCTTPV*VSSPVS Trigger: TGAGACGGGAGAGCTCACGCAGACAGGAGTCGTGCA...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCTTCCTCCATTCTTTGTaGCAGACACTGGGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVLPRQIQTQRCASSFLHSL*QTLGSS Trigger: ACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAA...GCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTAGTGCAGTCGATTTCTaGCCGCTTTGTTTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATSAVDF*PLCFGN Trigger: ATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACT...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACACTTGGCTGGTGCTTaGAATAAACCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAHLAGA*NKPSSS Trigger: ACTGGAAGAAGGTTTATTTCAAGCACCAGCCAAGTG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCACAAACATATCCCGTTTaGCAAAGCGGACCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAQTYPV*QSGPSS Trigger: AGAACTTGGTCCGCTTTGTCAAACGGGATATGTTTG...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCTACGCTTGGAATGTTaGAGTACAGAAGAGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFKDESADTAREPELAATLRLEC*STEELH Trigger: ATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAG...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCATTCCTCCATTCTTTGTaGCAGACACTGGGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPWACYHVRYRPNAVLLAFLHSL*QTLGSS Trigger: ACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAA...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAACTGGCCGCTTTGTTTTaGGAATGGCATACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKLAALF*EWHTVG Trigger: ACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAG...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTGACCTTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAAGTGCAGTCGATTTCTaGCCGCTTTGTTTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTFRSTEPKILTFWSPPPSAVDF*PLCFGN Trigger: ATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACT...TGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAAGGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTAGAAGTGGCAGAGCATaGAATCGATGGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSRSGRA*NRWGWP Trigger: CGGCCAACCCCATCGATTCCATGCTCTGCCACTTCT...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCCCGTCTGATTTAGGATaGGGTGGGCCCCGAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSPSDLG*GGPRGG Trigger: CCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGG...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTTGGCAGAAGGAGGTGTaGAAGGTAACATCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSWQKEV*KVTSAP Trigger: CGGGGCTGATGTTACCTTCCACACCTCCTTCTGCCA...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCAGGAAGAACTGCAGGCTaGGGCTCAGGAAAGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPGRTAG*GSGKPR Trigger: TCTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCC...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTTGTCCCCATGGCGAATaGACACATGAACGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSCPHGE*THERRP Trigger: TGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACA...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCGGCACTGAGGATGGGTaGCAGGGTGACGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSGTEDG*QGDVMS Trigger: GCTCATGACGTCACCCTGTCACCCATCCTCAGTGCC...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGGAAACAAACATATCCCGTTTaGCAAAGCGGACCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPEKGCQAKHTVNSSLWKQTYPV*QSGPSS Trigger: AGAACTTGGTCCGCTTTGTCAAACGGGATATGTTTG...TTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCAATGTCCCTCAGCAGCTaGCCATTCAGCAGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPMSLSS*PFSRCC Trigger: GCAGCATCTGCTGAATGGCCAGCTGCTGAGGGACAT...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCAAGAAGTGGCAGAGCATaGAATCGATGGGGTTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPRSGRA*NRWGWP Trigger: CGGCCAACCCCATCGATTCCATGCTCTGCCACTTCT...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GKRVSELSFGLLPTTKQVTLWQK*QSMESM Trigger: CATCGATTCCATGCTCTGCCACTTCTGCCACAATGT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCATGGCAGAAGGAGGTGTaGAAGGTAACATCAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPWQKEV*KVTSAP Trigger: CGGGGCTGATGTTACCTTCCACACCTCCTTCTGCCA...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCATGTCCCCATGGCGAATaGACACATGAACGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPCPHGE*THERRP Trigger: TGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACA...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGGGCACTGAGGATGGGTaGCAGGGTGACGTCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRGTEDG*QGDVMS Trigger: GCTCATGACGTCACCCTGTCACCCATCCTCAGTGCC...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAACAAACATATCCCGTTTaGCAAAGCGGACCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKQTYPV*QSGPSS Trigger: AGAACTTGGTCCGCTTTGTCAAACGGGATATGTTTG...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAATCCTCTTTCGACTCTTaGTGCTTCCTCCATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKSSFDS*CFLHSL Trigger: CAAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGA...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGTGCACGACTCCTGTCTaGGTGAGCTCTCCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLCTTPV*VSSPVS Trigger: TGAGACGGGAGAGCTCACGCAGACAGGAGTCGTGCA...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAATTCCTCCATTCTTTGTaGCAGACACTGGGATCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKFLHSL*QTLGSS Trigger: ACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAA...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTGCACGACTCCTGTCTaGGTGAGCTCTCCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRCTTPV*VSSPVS Trigger: TGAGACGGGAGAGCTCACGCAGACAGGAGTCGTGCA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCGGATGTCCACAATCTTaGCCATCTCCCCGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSGCPQS*PSPRRS Trigger: GGACCTACGGGGAGATGGCCAAGATTGTGGACATCC...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCGGATGTCCACAATCTTaGCCATCTCCCCGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSGCPQS*PSPRRS Trigger: GGACCTACGGGGAGATGGCCAAGATTGTGGACATCC...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCTCACTGGGTCAGGCATaGTCCTCTTTCGACTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSSLGQA*SSFDSC Trigger: GCAAGAGTCGAAAGAGGATCATGCCTGACCCAGTGA...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCTGTCCCCATGGCGAATaGACACATGAACGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSCPHGE*THERRP Trigger: TGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACA...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGTGCTGCAGGGGAAGCTaGCATTGTGGCAGAAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTCCRGS*HCGRSG Trigger: GCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCA...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGTGTTCACTGGGCTTTTaGCGGTCTTGCCAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLCSLGF*RSCQSS Trigger: TGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACA...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCTGTTCACTGGGCTTTTaGCGGTCTTGCCAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSCSLGF*RSCQSS Trigger: TGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACA...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCCTTCCAGTCAAACTCTaGGAGGAAGCCGTAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSLPVKL*EEAVEQ Trigger: CTGCTCTACGGCTTCCTCCCAGAGTTTGACTGGAAG...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCAACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATG | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPTLWQK*QSMESM Trigger: CATCGATTCCATGCTCTGCCACTTCTGCCACAATGT...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGGGGAAGCTGACATTGTaGCAGAAGTGGCAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLGKLTL*QKWQSM Trigger: CATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCC...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCGGACCGAATGTTCACTaGGCTTTTGACGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSGPNVH*AFDGLA Trigger: GGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCC...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGGGACCGAATGTTCACTaGGCTTTTGACGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLGPNVH*AFDGLA Trigger: GGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCC...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | TTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCAGAGAAAGATCCTTTCAACATGTaGCTAATGAAAGCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRSTEPKILTFWSPPPEKDPFNM*LMKASS Trigger: ACTAGAAGCTTTCATTAGTCACATGTTGAAAGGATC...TTTCTCTGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCACACTTGGCTGGTGCTTaGAATAAACCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NILLCASCLSQPMSMKTPHLAGA*NKPSSS Trigger: ACTGGAAGAAGGTTTATTTCAAGCACCAGCCAAGTG...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGGGATGGGTGACAGGGTaGCGTCATGAGCAGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTGWVTG*RHEQSR Trigger: TCTACTCTGCTCATGACGTCACCCTGTCACCCATCC...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSVLRYA*NVAVQK Trigger: CTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCAC...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGCTGGCCGCTTTGTTTTaGGAATGGCATACAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLLAALF*EWHTVG Trigger: ACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAG...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGATGTCCCTCAGCAGCTaGCCATTCAGCAGATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTMSLSS*PFSRCC Trigger: GCAGCATCTGCTGAATGGCCAGCTGCTGAGGGACAT...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCGCAGAACAGGGCACTTaGCTGGTGCTTGAAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSAEQGT*LVLEIN Trigger: GTTTATTTCAAGCACCAGCCAAGTGCCCTGTTCTGC...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGGGACCGAATGTTCACTaGGCTTTTGACGGTCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTGPNVH*AFDGLA Trigger: GGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCC...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| 3UTR CAA 72 bp | CATTATTTATTTTTGGAGGGAAAACGAGTGTCTGAATaGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HYLFLEGKRVSE*SFGLLPTTKQV Trigger: CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCCCTCCAAAAATAAATAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR GCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCTCCTCTTTCGACTCTTaGTGCTTCCTCCATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSSSFDS*CFLHSL Trigger: CAAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGA...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCAGTGCAGTCGATTTCTaGCCGCTTTGTTTTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQVSKTHLKLFCATILTSSAVDF*PLCFGN Trigger: ATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACT...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGGCAGAACAGGGCACTTaGCTGGTGCTTGAAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRAEQGT*LVLEIN Trigger: GTTTATTTCAAGCACCAGCCAAGTGCCCTGTTCTGC...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR GCA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTCCTCTTTCGACTCTTaGTGCTTCCTCCATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRSSFDS*CFLHSL Trigger: CAAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGGCAGAACAGGGCACTTaGCTGGTGCTTGAAATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTAEQGT*LVLEIN Trigger: GTTTATTTCAAGCACCAGCCAAGTGCCCTGTTCTGC...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGCACTTGGCTGGTGCTTaGAATAAACCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTHLAGA*NKPSSS Trigger: ACTGGAAGAAGGTTTATTTCAAGCACCAGCCAAGTG...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCGATCCTTTCAACATGTaGCTAATGAAAGCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENVPSFLCEPAILYQVTSDPFNM*LMKASS Trigger: ACTAGAAGCTTTCATTAGTCACATGTTGAAAGGATC...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR TCA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGGATCCTTTCAACATGTaGCTAATGAAAGCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPYLDILATDRTSNKTLLDPFNM*LMKASS Trigger: ACTAGAAGCTTTCATTAGTCACATGTTGAAAGGATC...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 90 bp | ACTCTGGGAGGAAGCCGTAGAGCAGGGCTAGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCTCCAGGTAAAGCTGGTCTGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLGGSRRAGLARSAG*GSSPCSPGKAGLRT Trigger: GGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCTGCTCTACGGCTTCCTCCCAGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS TCA 90 bp | TCATCCCTCCAGCCCGAGGCAGCGCGCTGCATCCGGTTGACCGTCTaGTTTAGGATGGGGTGGGCCCCGAGGAGGGAGTACCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLQPEAARCIRLTV*FRMGWAPRREYPKY Trigger: GTACTTTGGGTACTCCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGGTCAACCGGATGCAGCGCGCTGCCTCGGGCTGGAGGGATGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 90 bp | CGTAGAGCAGGGCTAGCCCGCTCTGCAGGGTGCGGCTCTTCCCCGTaGTCTCCAGGTAAAGCTGGTCTGAGGACCAGTTGTTGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRAGLARSAGCGSSP*SPGKAGLRTSCWAE Trigger: TTCTGCCCAACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCTGCTCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS CCA 90 bp | AGGCAGCCGCTTCTGCTGCAGGGGAAGCTGACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATGGGGTTGGCCGCGCGGAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQPLLLQGKLTLWQK*QSMESMGLAARSCF Trigger: GAAGCAGCTCCGCGCGGCCAACCCCATCGATTCCATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCAGAAGCGGCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 90 bp | GGCAGAGCATGGAATCGATGGGGTTGGCCGCGCGGAGCTGCTTCGTaGGGATGTCCACAATCTTGGCCATCTCCCCGTAGGTCCTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GRAWNRWGWPRGAAS*GCPQSWPSPRRSSL Trigger: TAGAGAGGACCTACGGGGAGATGGCCAAGATTGTGGACATCCCCACGAAGCAGCTCCGCGCGGCCAACCCCATCGATTCCATGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCGGCTTGGGAGAGCGCTaGTGGAAGTCATGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESADTAREPELAATHSVCGLGER*WKSWQK Trigger: CTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCC...GCAAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 90 bp | GCGGGGCATGACCTTCCATGCTGTGCTCCGCTACGCTTGGAATGTTaGAGTACAGAAGAGCTTCATAAACCGGGTCTACGGTGGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHDLPCCAPLRLEC*STEELHKPGLRWEA Trigger: AGCCTCCCACCGTAGACCCGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTCATGCCCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 ENSMUST00000154146.8 |
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| CDS CCA 90 bp | CCAAAGTACAGGAGCTTCTCGTGGCGCTCCCTCTCATCCTCTATCTaGTGCGTCTTGATCACCTTGAAGTGCTCCATGCCAAGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PKYRSFSWRSLSSSI*CVLITLKCSMPRQP Trigger: CGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGAGAAGCTCCTGTACTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGCGTCTTGATCACCTaGAAGTGCTCCATGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLCVLIT*KCSMPR Trigger: CCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCA...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLMFTGL*TVLPEL Trigger: GAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACAT...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TTTGCTCACACATGGCCACTTATGCGTCGCCACACCACCAGAGCACAGCTGAGAGGCTTGGGAGAGCGCTaGTGGAAGTCATGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FAHTWPLMRRHTTRAQLRGLGER*WKSWQK Trigger: CTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCC...TCTCAGCTGTGCTCTGGTGGTGTGGCGACGCATAAGTGGCCATGTGTGAGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 90 bp | AAGTACAGGAGCTTCTCGTGGCGCTCCCTCTCATCCTCTATCTGGTaGGTCTTGATCACCTTGAAGTGCTCCATGCCAAGGCAGCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KYRSFSWRSLSSSIW*VLITLKCSMPRQPL Trigger: AAGCGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGAGAAGCTCCTGTACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 90 bp | CTCTTGCTGCTTCCTCCATTCTTTGTGGCAGACACTGGGATCAAGTaGAAGAACTGCAGGCTGAGGCTCAGGAAAGCCAAGAGCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPPFFVADTGIK*KNCRLRLRKAKSPA Trigger: GGCTGGGCTCTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCCACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAAGCAGCAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000124923.2 ENSMUST00000154146.8 |
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| CDS CCA 90 bp | CGGACCAAGTTCTCAAGAGGACACATAGGCTTGGGAGAGCGCTTGTaGAAGTCATGGCAGAAGGAGGTGTGGAAGGTAACATCAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTKFSRGHIGLGERL*KSWQKEVWKVTSAP Trigger: CGGGGCTGATGTTACCTTCCACACCTCCTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCCTATGTGTCCTCTTGAGAACTTGGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLCAPLR*ECCSTE Trigger: TTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACA...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TCCCCGCCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPPEKGCQAKHTVNSSLSIWCV*ITLKCS Trigger: GGAGCACTTCAAGGTGATCAAGACGCACCAGATAGA...GAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGGCGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS TCA 90 bp | CATAAACCGGGTCTACGGTGGGAGGCTCTGTCACTGGGTCAGGCATaGTCCTCTTTCGACTCTTGCTGCTTCCTCCATTCTTTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HKPGLRWEALSLGQA*SSFDSCCFLHSLWQ Trigger: CTGCCACAAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGATCATGCCTGACCCAGTGACAGAGCCTCCCACCGTAGACCCGGTTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000124923.2 ENSMUST00000154146.8 |
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| CDS TCA 90 bp | CTGCAGGGTGCGGCTCTTCCCCGTGCTCTCCAGGTAAAGCTGGTCTaGGGACCAGTTGTTGGGCAGAAGTTTGTGTTTCCTCAGATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQGAALPRALQVKLV*GPVVGQKFVFPQID Trigger: ATCTATCTGAGGAAACACAAACTTCTGCCCAACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGCACCCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTTGCTTCCTCCATTCTTaGTGGCAGACACTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: AFKDESADTAREPELAATCFLHS*WQTLGS Trigger: TGATCCCAGTGTCTGCCACAAAGAATGGAGGAAGCA...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | ATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCACTCTGTTTGCTACGCTTGGAATGTaGCAGTACAGAAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSQQTRPESPSWLPLTLFATLGM*QYRRAS Trigger: TGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGC...AAACAGAGTGAGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GGCTGGAATGCTGAAGCTGGAGAACCCACCTGCATGGGCCATGTCTGCGGAACGACAAACATATCCCGTTaGACAAAGCGGACCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GWNAEAGEPTCMGHVCGTTNISR*TKRTKF Trigger: GAACTTGGTCCGCTTTGTCAAACGGGATATGTTTGT...CGTTCCGCAGACATGGCCCATGCAGGTGGGTTCTCCAGCTTCAGCATTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| CDS CCA 90 bp | CAGAAGAGCTTCATAAACCGGGTCTACGGTGGGAGGCTCTGTCACTaGGTCAGGCATGATCCTCTTTCGACTCTTGCTGCTTCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QKSFINRVYGGRLCH*VRHDPLSTLAASSI Trigger: AATGGAGGAAGCAGCAAGAGTCGAAAGAGGATCATGCCTGACCCAGTGACAGAGCCTCCCACCGTAGACCCGGTTTATGAAGCTCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000154146.8 |
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| CDS-3UTR CAA 90 bp | GTGACCTTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCATGCTTCCTCCATTCTTaGTGGCAGACACTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VTFRSTEPKILTFWSPPPCFLHS*WQTLGS Trigger: TGATCCCAGTGTCTGCCACAAAGAATGGAGGAAGCA...TGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAAGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GCTTTTAAAGATGAGTCAGCAGACACGGCCAGAGAGCCCGAGCTGGCTGCCACTCGATTTCTGGCCGCTTaGTTTTGGGAATGGCATACA | + |
|
Preference number: 5 (lower is better) Translates to: AFKDESADTAREPELAATRFLAA*FWEWHT Trigger: TGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCG...AGTGGCAGCCAGCTCGGGCTCTCTGGCCGTGTCTGCTGACTCATCTTTAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGGGCGTGTTACCACGTCAGATACAGACCCAACGCTGTGCTTCTAGCATCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPWACYHVRYRPNAVLLASIWCV*ITLKCS Trigger: GGAGCACTTCAAGGTGATCAAGACGCACCAGATAGA...TGCTAGAAGCACAGCGTTGGGTCTGTATCTGACGTGGTAACACGCCCAGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GTGACCTTTAGGTCTACAGAGCCTAAGATACTGACCTTCTGGTCCCCGCCCCCATCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTFRSTEPKILTFWSPPPSIWCV*ITLKCS Trigger: GGAGCACTTCAAGGTGATCAAGACGCACCAGATAGA...TGGGGGCGGGGACCAGAAGGTCAGTATCTTAGGCTCTGTAGACCTAAAGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS TCA 90 bp | GGCAGTAGCAGCTTCCAGAGCAGAACAGGGCACTTGGCTGGTGCTTaGAATAAACCTTCTTCCAGTCAAACTCTGGGAGGAAGCCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSSSFQSRTGHLAGA*NKPSSSQTLGGSRR Trigger: TCTACGGCTTCCTCCCAGAGTTTGACTGGAAGAAGGTTTATTTCAAGCACCAGCCAAGTGCCCTGTTCTGCTCTGGAAGCTGCTACTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 90 bp | AGTGCAGTCGATTTCTGGCCGCTTTGTTTTGGGAATGGCATACAGTaGGTACCTGTCCCCATGGCGAATGAACACATGAACGGAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVDFWPLCFGNGIQ*VPVPMANEHMNGDQ Trigger: CTGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACAGGTACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CCA 90 bp | TCTTCCCCGTGCTCTCCAGGTAAAGCTGGTCTGAGGACCAGTTGTTaGGCAGAAGTTTGTGTTTCCTCAGATAGATGTCCCTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSPCSPGKAGLRTSC*AEVCVSSDRCPSAA Trigger: AGCTGCTGAGGGACATCTATCTGAGGAAACACAAACTTCTGCCCAACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS-3UTR CAA 90 bp | CCCCCAGAGAAAGGCTGCCAAGCCAAGCACACTGTGAACTCATCACTCTGGAAATGCTTCCTCCATTCTTaGTGGCAGACACTGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PPEKGCQAKHTVNSSLWKCFLHS*WQTLGS Trigger: TGATCCCAGTGTCTGCCACAAAGAATGGAGGAAGCA...TTTCCAGAGTGATGAGTTCACAGTGTGCTTGGCTTGGCAGCCTTTCTCTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKRVSELSFGLLPTTKQVMFTGL*TVLPEL Trigger: GAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACAT...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 90 bp | ATAATGATGCGGGGCATGACCTTCCATGCTGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAGAGCTTCATAAACCGGGTCTACGGT | + |
|
Preference number: 5 (lower is better) Translates to: IMMRGMTFHAVLRYA*NVAVQKSFINRVYG Trigger: ACCGTAGACCCGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTCATGCCCCGCATCATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
||
| CDS-3UTR CAA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCACAGGGGAAGCTGACATaGTGGCAGAAGTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: NILLCASCLSQPMSMKTPQGKLT*WQKWQS Trigger: GCTCTGCCACTTCTGCCACAATGTCAGCTTCCCCTG...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAACGAGTGTCTGAATTGAGCTTTGGCCTCCTTCCAACCACCAAGCAGGTGGCTACGCTTGGAATGTaGCAGTACAGAAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKRVSELSFGLLPTTKQVATLGM*QYRRAS Trigger: TGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGC...CACCTGCTTGGTGGTTGGAAGGAGGCCAAAGCTCAATTCAGACACTCGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSMFTGL*TVLPEL Trigger: GAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACAT...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCCAGGGGAAGCTGACATaGTGGCAGAAGTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQVSKTHLKLFCATILTSQGKLT*WQKWQS Trigger: GCTCTGCCACTTCTGCCACAATGTCAGCTTCCCCTG...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | AACATCCTGTTATGTGCTTCCTGTCTGTCTCAACCAATGAGCATGAAGACCCCAATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NILLCASCLSQPMSMKTPMFTGL*TVLPEL Trigger: GAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACAT...TGGGGTCTTCATGCTCATTGGTTGAGACAGACAGGAAGCACATAACAGGATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGGGCTTGGGAGAGCGCTaGTGGAAGTCATGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLGLGER*WKSWQK Trigger: CTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCC...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | TTATGCTGGCACTCTAAGCTGCACACGGCCATGAAAACGTACCTTCTTTCCTCTCGATTTCTGGCCGCTTaGTTTTGGGAATGGCATACA | + |
|
Preference number: 5 (lower is better) Translates to: LCWHSKLHTAMKTYLLSSRFLAA*FWEWHT Trigger: TGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCG...AGAGGAAAGAAGGTACGTTTTCATGGCCGTGTGCAGCTTAGAGTGCCAGCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGTCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLSGRFV*GMAYSG Trigger: CCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGA...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCTGCGTCTTGATCACCTaGAAGTGCTCCATGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ENVPSFLCEPAILYQVTSCVLIT*KCSMPR Trigger: CCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCA...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLCAPLR*ECCSTE Trigger: TTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACA...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: ENVPSFLCEPAILYQVTSCAPLR*ECCSTE Trigger: TTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACA...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRSGRFV*GMAYSG Trigger: CCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGTGCGTCTTGATCACCTaGAAGTGCTCCATGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRCVLIT*KCSMPR Trigger: CCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCA...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCTCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENVPSFLCEPAILYQVTSSIWCV*ITLKCS Trigger: GGAGCACTTCAAGGTGATCAAGACGCACCAGATAGA...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGTATCTAAGACACACTTAAAGCTATTTTGTGCCACGATCCTCACGAGCGCTACGCTTGGAATGTaGCAGTACAGAAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQVSKTHLKLFCATILTSATLGM*QYRRAS Trigger: TGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGC...GCTCGTGAGGATCGTGGCACAAAATAGCTTTAAGTGTGTCTTAGATACTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGTCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTSGRFV*GMAYSG Trigger: CCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGA...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGCGATTTCTGGCCGCTTaGTTTTGGGAATGGCATACA | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLRFLAA*FWEWHT Trigger: TGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCG...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGATCCTCTTTCGACTCTaGCTGCTTCCTCCATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLILFRL*LLPPFF Trigger: AAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGAT...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTCAPLR*ECCSTE Trigger: TTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACA...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | AAGATTTTTGGCAGAGGTTTGCTGGTTCCATGGCAGGTCAAAAGTTATATAAGGCGATTTCTGGCCGCTTaGTTTTGGGAATGGCATACA | + |
|
Preference number: 5 (lower is better) Translates to: KIFGRGLLVPWQVKSYIRRFLAA*FWEWHT Trigger: TGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCG...CCTTATATAACTTTTGACCTGCCATGGAACCAGCAAACCTCTGCCAAAAATCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GAAAACGTACCTTCTTTCCTCTGTGAACCGGCTATTTTGTACCAAGTAACATCCACAAACATATCCCGTTaGACAAAGCGGACCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENVPSFLCEPAILYQVTSTNISR*TKRTKF Trigger: GAACTTGGTCCGCTTTGTCAAACGGGATATGTTTGT...GGATGTTACTTGGTACAAAATAGCCGGTTCACAGAGGAAAGAAGGTACGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | ACTCCATACCTTGACATCTTAGCAACAGACAGAACCAGCAATAAAACACTGCTGACAAACATATCCCGTTaGACAAAGCGGACCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TPYLDILATDRTSNKTLLTNISR*TKRTKF Trigger: GAACTTGGTCCGCTTTGTCAAACGGGATATGTTTGT...CAGCAGTGTTTTATTGCTGGTTCTGTCTGTTGCTAAGATGTCAAGGTATGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAATCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MFISKNKTCSSATPDTKESGRFV*GMAYSG Trigger: CCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGA...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| CDS-3UTR CAA 90 bp | GTTCTACAGCTTGTCAAAGGGAACAGGTCATTATTTATTTTTGGAGGGAAAACGATCCTCTTTCGACTCTaGCTGCTTCCTCCATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLQLVKGNRSLFIFGGKTILFRL*LLPPFF Trigger: AAAGAATGGAGGAAGCAGCAAGAGTCGAAAGAGGAT...CGTTTTCCCTCCAAAAATAAATAATGACCTGTTCCCTTTGACAAGCTGTAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTATTTCTAAAAACAAAACGTGTTCGAGTGCAACACCAGACACAAAGGAAGCTACGCTTGGAATGTaGCAGTACAGAAGAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MFISKNKTCSSATPDTKEATLGM*QYRRAS Trigger: TGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGC...TTCCTTTGTGTCTGGTGTTGCACTCGAACACGTTTTGTTTTTAGAAATAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000120101.8 |
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| CDS TCA 72 bp | CAGCCCGAGGCAGCGCGCTGCATCCGGTTGACCGTCTaGTTTAGGATGGGGTGGGCCCCGAGGAGGGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QPEAARCIRLTV*FRMGWAPRREY Trigger: GTACTCCCTCCTCGGGGCCCACCCCATCCTAAATCAGACGGTCAACCGGATGCAGCGCGCTGCCTCGGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 72 bp | GGAAGCCGTAGAGCAGGGCTAGCCCGCTCTGCAGGGTaGGGCTCTTCCCCGTGCTCTCCAGGTAAAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GSRRAGLARSAG*GSSPCSPGKAG Trigger: ACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCCTGCTCTACGGCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
||
| CDS GCA 72 bp | GGGCTAGCCCGCTCTGCAGGGTGCGGCTCTTCCCCGTaGTCTCCAGGTAAAGCTGGTCTGAGGACCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLARSAGCGSSP*SPGKAGLRTSC Trigger: ACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGCACCCTGCAGAGCGGGCTAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS CCA 72 bp | TGGAATCGATGGGGTTGGCCGCGCGGAGCTGCTTCGTaGGGATGTCCACAATCTTGGCCATCTCCCCGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: WNRWGWPRGAAS*GCPQSWPSPRR Trigger: CCTACGGGGAGATGGCCAAGATTGTGGACATCCCCACGAAGCAGCTCCGCGCGGCCAACCCCATCGATTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 90 bp | TGCTCCATGCCAAGGCAGCCGCTTCTGCTGCAGGGGAAGCTGACATaGTGGCAGAAGTGGCAGAGCATGGAATCGATGGGGTTGGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSMPRQPLLLQGKLT*WQKWQSMESMGLAA Trigger: CGCGGCCAACCCCATCGATTCCATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCAGAAGCGGCTGCCTTGGCATGGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS GCA 72 bp | CAGAGCATGGAATCGATGGGGTTGGCCGCGCGGAGCTaGTTCGTGGGGATGTCCACAATCTTGGCCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSMESMGLAARS*FVGMSTILAIS Trigger: GGAGATGGCCAAGATTGTGGACATCCCCACGAAGCAGCTCCGCGCGGCCAACCCCATCGATTCCATGCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CCA 72 bp | CTTCTGCTGCAGGGGAAGCTGACATTGTGGCAGAAGTaGCAGAGCATGGAATCGATGGGGTTGGCCGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLQGKLTLWQK*QSMESMGLAAR Trigger: CCGCGCGGCCAACCCCATCGATTCCATGCTCTGCCACTTCTGCCACAATGTCAGCTTCCCCTGCAGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CAA 90 bp | AAGCTGACATTGTGGCAGAAGTGGCAGAGCATGGAATCGATGGGGTaGGCCGCGCGGAGCTGCTTCGTGGGGATGTCCACAATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KLTLWQKWQSMESMG*AARSCFVGMSTILA Trigger: GGCCAAGATTGTGGACATCCCCACGAAGCAGCTCCGCGCGGCCAACCCCATCGATTCCATGCTCTGCCACTTCTGCCACAATGTCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CAA 90 bp | TCGTGGCGCTCCCTCTCATCCTCTATCTGGTGCGTCTTGATCACCTaGAAGTGCTCCATGCCAAGGCAGCCGCTTCTGCTGCAGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWRSLSSSIWCVLIT*KCSMPRQPLLLQGK Trigger: CTTCCCCTGCAGCAGAAGCGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CAA 90 bp | AGGAGCTTCTCGTGGCGCTCCCTCTCATCCTCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCCATGCCAAGGCAGCCGCTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSFSWRSLSSSIWCV*ITLKCSMPRQPLLL Trigger: CAGCAGAAGCGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGAGAAGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CAA 72 bp | TCGTGGCGCTCCCTCTCATCCTCTATCTGGTGCGTCTaGATCACCTTGAAGTGCTCCATGCCAAGGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SWRSLSSSIWCV*ITLKCSMPRQP Trigger: CGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS GCA 72 bp | AGCTGGCCATTCAGCAGATGCTGCACGACTCCTGTCTaGGTGAGCTCTCCCGTCTCACACAGAGGATGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SWPFSRCCTTPV*VSSPVSHRGWL Trigger: TAACCATCCTCTGTGTGAGACGGGAGAGCTCACGCAGACAGGAGTCGTGCAGCATCTGCTGAATGGCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
||
| CDS TCA 72 bp | GCGGCTCTTCCCCGTGCTCTCCAGGTAAAGCTGGTCTaGGGACCAGTTGTTGGGCAGAAGTTTGTGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AALPRALQVKLV*GPVVGQKFVFP Trigger: AGGAAACACAAACTTCTGCCCAACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCACGGGGAAGAGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
||
| CDS GCA 72 bp | AGCTTCTCGTGGCGCTCCCTCTCATCCTCTATCTGGTaGGTCTTGATCACCTTGAAGTGCTCCATGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFSWRSLSSSIW*VLITLKCSMPR Trigger: CCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
||
| CDS CCA 72 bp | AGGAGCTTCTCGTGGCGCTCCCTCTCATCCTCTATCTaGTGCGTCTTGATCACCTTGAAGTGCTCCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSFSWRSLSSSI*CVLITLKCSMP Trigger: TGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGAGCGCCACGAGAAGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 72 bp | TCCCTCTCATCCTCTATCTGGTGCGTCTTGATCACCTaGAAGTGCTCCATGCCAAGGCAGCCGCTTCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLSSSIWCVLIT*KCSMPRQPLLL Trigger: CAGCAGAAGCGGCTGCCTTGGCATGGAGCACTTCAAGGTGATCAAGACGCACCAGATAGAGGATGAGAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 72 bp | TTCATAAACCGGGTCTACGGTGGGAGGCTCTGTCACTaGGTCAGGCATGATCCTCTTTCGACTCTTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FINRVYGGRLCH*VRHDPLSTLAA Trigger: AGCAGCAAGAGTCGAAAGAGGATCATGCCTGACCCAGTGACAGAGCCTCCCACCGTAGACCCGGTTTATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000124923.2 ENSMUST00000154146.8 |
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| CDS CCA 72 bp | CGGGGCATGACCTTCCATGCTGTGCTCCGCTACGCTTaGAATGTTGCAGTACAGAAGAGCTTCATAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: RGMTFHAVLRYA*NVAVQKSFINR Trigger: CCGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTCATGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 ENSMUST00000154146.8 |
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| CDS CCA 72 bp | CCACTAGAGTGCAGTCGATTTCTGGCCGCTTTGTTTTaGGAATGGCATACAGTGGGTACCTGTCCCCATGGC | + |
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Preference number: 6 (lower is better) Translates to: PLECSRFLAALF*EWHTVGTCPHG Trigger: GCCATGGGGACAGGTACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACTCTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CAA 72 bp | GCGGGGCATGACCTTCCATGCTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAAGAGCTTCATAAACCG | + |
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Preference number: 6 (lower is better) Translates to: AGHDLPCCAPLR*ECCSTEELHKP Trigger: CGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTCATGCCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 ENSMUST00000154146.8 |
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| CDS CAA 72 bp | GCCACTAGAGTGCAGTCGATTTCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGGTACCTGTCCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ATRVQSISGRFV*GMAYSGYLSPW Trigger: CCATGGGGACAGGTACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACTCTAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CAA 90 bp | AAGCGGACCAAGTTCTCAAGAGGACACATAGGCTTGGGAGAGCGCTaGTGGAAGTCATGGCAGAAGGAGGTGTGGAAGGTAACATCAGCC | + |
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Preference number: 6 (lower is better) Translates to: KRTKFSRGHIGLGER*WKSWQKEVWKVTSA Trigger: GGCTGATGTTACCTTCCACACCTCCTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCCTATGTGTCCTCTTGAGAACTTGGTCCGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 90 bp | TCCCGTTTGACAAAGCGGACCAAGTTCTCAAGAGGACACATAGGCTaGGGAGAGCGCTTGTGGAAGTCATGGCAGAAGGAGGTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRLTKRTKFSRGHIG*GERLWKSWQKEVWK Trigger: CTTCCACACCTCCTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCCTATGTGTCCTCTTGAGAACTTGGTCCGCTTTGTCAAACGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS GCA 72 bp | GACCTTCCATGCTGTGCTCCGCTACGCTTGGAATGTTaGAGTACAGAAGAGCTTCATAAACCGGGTCTACGG | + |
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Preference number: 6 (lower is better) Translates to: DLPCCAPLRLEC*STEELHKPGLR Trigger: CCGTAGACCCGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 ENSMUST00000154146.8 |
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| CDS CCA 72 bp | CTTCCTCCATTCTTTGTGGCAGACACTGGGATCAAGTaGAAGAACTGCAGGCTGAGGCTCAGGAAAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPPFFVADTGIK*KNCRLRLRKAK Trigger: CTTGGCTTTCCTGAGCCTCAGCCTGCAGTTCTTCCACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000124923.2 ENSMUST00000154146.8 |
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| CDS CCA 72 bp | ACTCTTGCTGCTTCCTCCATTCTTTGTGGCAGACACTaGGATCAAGTGGAAGAACTGCAGGCTGAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TLAASSILCGRH*DQVEELQAEAQ Trigger: CTGAGCCTCAGCCTGCAGTTCTTCCACTTGATCCCAGTGTCTGCCACAAAGAATGGAGGAAGCAGCAAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000124923.2 ENSMUST00000154146.8 |
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| CDS CAA 72 bp | AATTCGGACCGAATGTTCACTGGGCTTTTGACGGTCTaGCCAGAGCTCAAAAACCAGCCTGGCGGCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: NSDRMFTGLLTV*PELKNQPGGKP Trigger: AGGTTTGCCGCCAGGCTGGTTTTTGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCCGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 72 bp | ACAAAGCGGACCAAGTTCTCAAGAGGACACATAGGCTaGGGAGAGCGCTTGTGGAAGTCATGGCAGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TKRTKFSRGHIG*GERLWKSWQKE Trigger: CTCCTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCCTATGTGTCCTCTTGAGAACTTGGTCCGCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 90 bp | TTCCTGCTAGCCACTAGAGTGCAGTCGATTTCTGGCCGCTTTGTTTaGGGAATGGCATACAGTGGGTACCTGTCCCCATGGCGAATGAAC | + |
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Preference number: 6 (lower is better) Translates to: FLLATRVQSISGRFV*GMAYSGYLSPWRMN Trigger: GTTCATTCGCCATGGGGACAGGTACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGAAATCGACTGCACTCTAGTGGCTAGCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CAA 90 bp | TATAATGATGCGGGGCATGACCTTCCATGCTGTGCTCCGCTACGCTaGGAATGTTGCAGTACAGAAGAGCTTCATAAACCGGGTCTACGG | + |
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Preference number: 6 (lower is better) Translates to: YNDAGHDLPCCAPLR*ECCSTEELHKPGLR Trigger: CCGTAGACCCGGTTTATGAAGCTCTTCTGTACTGCAACATTCCAAGCGTAGCGGAGCACAGCATGGAAGGTCATGCCCCGCATCATTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CAA 90 bp | GTTATAAAGAATTCGGACCGAATGTTCACTGGGCTTTTGACGGTCTaGCCAGAGCTCAAAAACCAGCCTGGCGGCAAACCTCGGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: VIKNSDRMFTGLLTV*PELKNQPGGKPREP Trigger: AGGTTCCCGAGGTTTGCCGCCAGGCTGGTTTTTGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCCGAATTCTTTATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 90 bp | ATCAGCCCCGTTATAAAGAATTCGGACCGAATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTCAAAAACCAGCCTGGCGGCAAACCT | + |
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Preference number: 6 (lower is better) Translates to: ISPVIKNSDRMFTGL*TVLPELKNQPGGKP Trigger: AGGTTTGCCGCCAGGCTGGTTTTTGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCCGAATTCTTTATAACGGGGCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 72 bp | CTCTCTAGGTCGCTGTTCTTCAAACGTAGCAGGTACTaGCGTCGCTGTTCCTTCTCCAGATACTGGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LSRSLFFKRSRY*RRCSFSRYWFL Trigger: GAGAAACCAGTATCTGGAGAAGGAACAGCGACGCCAGTACCTGCTACGTTTGAAGAACAGCGACCTAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CCA 72 bp | TTCTCAAGAGGACACATAGGCTTGGGAGAGCGCTTGTaGAAGTCATGGCAGAAGGAGGTGTGGAAGGTAACA | + |
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Preference number: 6 (lower is better) Translates to: FSRGHIGLGERL*KSWQKEVWKVT Trigger: TGTTACCTTCCACACCTCCTTCTGCCATGACTTCCACAAGCGCTCTCCCAAGCCTATGTGTCCTCTTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS TCA 72 bp | GAATGGCATACAGTGGGTACCTGTCCCCATGGCGAATaGACACATGAACGGAGACCAGCTTATAATGATGCG | + |
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Preference number: 6 (lower is better) Translates to: EWHTVGTCPHGE*THERRPAYNDA Trigger: CGCATCATTATAAGCTGGTCTCCGTTCATGTGTTCATTCGCCATGGGGACAGGTACCCACTGTATGCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CCA 72 bp | GATTTCTGGCCGCTTTGTTTTGGGAATGGCATACAGTaGGTACCTGTCCCCATGGCGAATGAACACATGAAC | + |
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Preference number: 6 (lower is better) Translates to: DFWPLCFGNGIQ*VPVPMANEHMN Trigger: GTTCATGTGTTCATTCGCCATGGGGACAGGTACCCACTGTATGCCATTCCCAAAACAAAGCGGCCAGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000121077.8 ENSMUST00000126411.8 |
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| CDS CCA 72 bp | TGCTCTCCAGGTAAAGCTGGTCTGAGGACCAGTTGTTaGGCAGAAGTTTGTGTTTCCTCAGATAGATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: CSPGKAGLRTSC*AEVCVSSDRCP Trigger: GGGACATCTATCTGAGGAAACACAAACTTCTGCCCAACAACTGGTCCTCAGACCAGCTTTACCTGGAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 ENSMUST00000126411.8 |
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| CDS CAA 72 bp | GTTATAAAGAATTCGGACCGAATGTTCACTGGGCTTTaGACGGTCTTGCCAGAGCTCAAAAACCAGCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VIKNSDRMFTGL*TVLPELKNQPG Trigger: GCCAGGCTGGTTTTTGAGCTCTGGCAAGACCGTCAAAAGCCCAGTGAACATTCGGTCCGAATTCTTTATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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| CDS CAA 72 bp | GTACTACTGCCATCCAGGGCCACAAACATATCCCGTTaGACAAAGCGGACCAAGTTCTCAAGAGGACACATA | + |
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Preference number: 6 (lower is better) Translates to: VLLPSRATNISR*TKRTKFSRGHI Trigger: TATGTGTCCTCTTGAGAACTTGGTCCGCTTTGTCAAACGGGATATGTTTGTGGCCCTGGATGGCAGTAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078478.8 ENSMUST00000112951.9 ENSMUST00000119141.8 ENSMUST00000120101.8 |
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