Pregenerated sensors for PXMP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000876Ensembl transcript IDs: ENSMUST00000000896.11, ENSMUST00000109703.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTCCTCCACGAGGGTATGCCAACAGAACCATACCCTGAGCAGCTaGCTGGAAGGTGGGCTGCTGCCTGGAAGCTGTCTGGGCGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: GSSTRVCQQNHTLSS*LEGGLLPGSCLGGG Trigger: TCCTCCGCCCAGACAGCTTCCAGGCAGCAGCCCACCTTCCAGGCAGCTGCTCAGGGTATGGTTCTGTTGGCATACCCTCGTGGAGGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 90 bp | CCCATACCCTCAGTTCCAAGGAACTCAGCGCCCTCTGCTGACTTCTaGTGGTACCACACACACGCATGGTACACAGATGTACATGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: PIPSVPRNSAPSADF*WYHTHAWYTDVHAG Trigger: GCCTGCATGTACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGCTGAGTTCCTTGGAACTGAGGGTATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 90 bp | GAGGGGGTGAGTTTGCCCTGGCCTTACAGAAGTCGGAAGAGCATCTaGAATCAAGCCACAGACTCCTTAATGGGACCCAGCCACTTGCTA | + |
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Preference number: 1 (lower is better) Translates to: EGVSLPWPYRSRKSI*NQATDSLMGPSHLL Trigger: TAGCAAGTGGCTGGGTCCCATTAAGGAGTCTGTGGCTTGATTCCAGATGCTCTTCCGACTTCTGTAAGGCCAGGGCAAACTCACCCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 90 bp | GCATGCACACATGCCAAGGCACACATGTGGGGGCAGAGGACAACTTaGAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTAGAACA | + |
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Preference number: 1 (lower is better) Translates to: ACTHAKAHMWGQRTT*RSWFSSSTMSPCRT Trigger: TGTTCTACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCCCCACATGTGTGCCTTGGCATGTGTGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 90 bp | ATACCCTCAGTTCCAAGGAACTCAGCGCCCTCTGCTGACTTCTGCTaGTACCACACACACGCATGGTACACAGATGTACATGCAGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: IPSVPRNSAPSADFC*YHTHAWYTDVHAGK Trigger: TTTGCCTGCATGTACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGCTGAGTTCCTTGGAACTGAGGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR TCA 90 bp | AAGGAAACACGGGCTTCAAAGTCAGGCAGGCTGTTCAAATCATCCTaGGACCACATACCTGGAAAACATGGATCAGCGTGCATCCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: KETRASKSGRLFKSS*DHIPGKHGSACILA Trigger: TGCAAGGATGCACGCTGATCCATGTTTTCCAGGTATGTGGTCTCAGGATGATTTGAACAGCCTGCCTGACTTTGAAGCCCGTGTTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 90 bp | ATGTGGACACTTGAAGTTTTATTCTCAGTGCTGGTGATAGGATCCTaGGTCTCATACAAGCTTGACACGTGCTGTGCACGTGACTCATCT | + |
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Preference number: 1 (lower is better) Translates to: MWTLEVLFSVLVIGS*VSYKLDTCCARDSS Trigger: AGATGAGTCACGTGCACAGCACGTGTCAAGCTTGTATGAGACGCAGGATCCTATCACCAGCACTGAGAATAAAACTTCAAGTGTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 90 bp | TCATACAACAACAACAACAACAACAACAACAACAACAAACTTAAGTaGTCTTGCAGACGACCAAGACCAAGCTTCATTTCCCACATAGTG | + |
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Preference number: 1 (lower is better) Translates to: SYNNNNNNNNNNKLK*SCRRPRPSFISHIV Trigger: CACTATGTGGGAAATGAAGCTTGGTCTTGGTCGTCTGCAAGAGCACTTAAGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | GCGCCCTCTGCTGACTTCTGCTGGTACCACACACACGCATGGTACACAGATGTAAGGTGGGCTGCTGCCTaGAAGCTGTCTGGGCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: APSADFCWYHTHAWYTDVRWAAA*KLSGRR Trigger: CCTCCGCCCAGACAGCTTCCAGGCAGCAGCCCACCT...TACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | GACCTGGTGCACGCAGAACACACTGGCAGTGTTGAGGACATACTTCAAGAAAGGCAGCTGCCTGGAAGGTaGGCTGCTGCCTGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: DLVHAEHTGSVEDILQERQLPGR*AAAWKL Trigger: CAGCTTCCAGGCAGCAGCCCACCTTCCAGGCAGCTG...CCTTTCTTGAAGTATGTCCTCAACACTGCCAGTGTGTTCTGCGTGCACCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | GCGCCCTCTGCTGACTTCTGCTGGTACCACACACACGCATGGTACACAGATGTAGCCAAGGCACACATGTaGGGGCAGAGGACAACTTGC | + |
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Preference number: 2 (lower is better) Translates to: APSADFCWYHTHAWYTDVAKAHM*GQRTTC Trigger: GCAAGTTGTCCTCTGCCCCCACATGTGTGCCTTGGC...TACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR TCA 90 bp | TCACAACACCCATACCCTCAGTTCCAAGGAACTCAGCGCCCTCTGCTGACTTCTAACAGAACCATACCCTaGGCAGCTGCCTGGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SQHPYPQFQGTQRPLLTSNRTIP*AAAWKV Trigger: CACCTTCCAGGCAGCTGCTCAGGGTATGGTTCTGTT...AGAAGTCAGCAGAGGGCGCTGAGTTCCTTGGAACTGAGGGTATGGGTGTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR TCA 90 bp | TCACAACACCCATACCCTCAGTTCCAAGGAACTCAGCGCCCTCTGCTGACTTCTACCATCTTGACTCACTaGGCCATCTCCTTGGACGCC | + |
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Preference number: 2 (lower is better) Translates to: SQHPYPQFQGTQRPLLTSTILTH*AISLDA Trigger: GGCGTCCAAGGAGATGGCTCAGTGAGTCAAGATGGT...AGAAGTCAGCAGAGGGCGCTGAGTTCCTTGGAACTGAGGGTATGGGTGTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR TCA 90 bp | TGTTCAAATCATCCTGAGACCACATACCTGGAAAACATGGATCAGCGTGCATCCGAGGCAGAGGCAGTCTaGGTTCGAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CSNHPETTYLENMDQRASEAEAV*VRGQPG Trigger: ACCAGGCTGGCCTCGAACTCAGACTGCCTCTGCCTC...GGATGCACGCTGATCCATGTTTTCCAGGTATGTGGTCTCAGGATGATTTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGTGCACGCAGAACACACTGGCAGTGTTGAGGACATACTTCAAGAAAGGGTGTGCACGTGTGCATaGACACATGCCAAGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: DLVHAEHTGSVEDILQERVCTCA*THAKAH Trigger: GTGTGCCTTGGCATGTGTGCATGCACACGTGCACAC...CCTTTCTTGAAGTATGTCCTCAACACTGCCAGTGTGTTCTGCGTGCACCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTAGTCGGAAGAGCATCTaGAATCAAGCCACAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: GQRTTCRSWFSSSTMSPCSRKSI*NQATDS Trigger: GGAGTCTGTGGCTTGATTCCAGATGCTCTTCCGACT...ACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGTCAGGAGGAAGGAGAAACTCGCTATGCTGAAGTCACTGGTATAGTGGCTTCTGCTGACTTCTGCTaGTACCACACACACGCATGG | + |
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Preference number: 2 (lower is better) Translates to: SSQEEGETRYAEVTGIVASADFC*YHTHAW Trigger: CCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGA...AGCCACTATACCAGTGACTTCAGCATAGCGAGTTTCTCCTTCCTCCTGACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAAATCATCCTGAGACCACATACCTGGAAAACATGGATCAGCGTGCATCCGGATGCATCACAGAGTaGGGGCAGGGCTCAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: CSNHPETTYLENMDQRASGCITE*GQGSDC Trigger: ACAGTCTGAGCCCTGCCCCCACTCTGTGATGCATCC...GGATGCACGCTGATCCATGTTTTCCAGGTATGTGGTCTCAGGATGATTTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCATTTCCCACATAGTGGCTCACAACACCCATACCCTCAGTTCCAAGGAATGGCTGCAACCATCTTaGCTCACTGAGCCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SFISHIVAHNTHTLSSKEWLQPS*LTEPSP Trigger: AGGAGATGGCTCAGTGAGTCAAGATGGTTGCAGCCA...TTCCTTGGAACTGAGGGTATGGGTGTTGTGAGCCACTATGTGGGAAATGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | TGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTAGAACACAGGGATCACTCTGTAGACCAGGTTaGCCTCGAACTCAGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: CRSWFSSSTMSPCRTQGSLCRPG*PRTQKS Trigger: AGATTTCTGAGTTCGAGGCCAACCTGGTCTACAGAG...TGATCCCTGTGTTCTACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAAATCATCCTGAGACCACATACCTGGAAAACATGGATCAGCGTGCATCCCTGAGGCTGGAGAAATaGCTTAGTGGTGAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: CSNHPETTYLENMDQRASLRLEK*LSGERH Trigger: GTGCCTTTCACCACTAAGCCATTTCTCCAGCCTCAG...GGATGCACGCTGATCCATGTTTTCCAGGTATGTGGTCTCAGGATGATTTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CAA 90 bp | AGCATCTGGAATCAAGCCACAGACTCCTTAATGGGACCCAGCCACTaGCTACAGTACTCAAAAGTACTGGTAAGTGGAAAACTCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: SIWNQATDSLMGPSH*LQYSKVLVSGKLST Trigger: AGTACTGAGTTTTCCACTTACCAGTACTTTTGAGTACTGTAGCAAGTGGCTGGGTCCCATTAAGGAGTCTGTGGCTTGATTCCAGATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | GACCTGGTGCACGCAGAACACACTGGCAGTGTTGAGGACATACTTCAAGAAAGGTGGGTTAATACAAGTTaGAGTGTGAGGATTATGACT | + |
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Preference number: 2 (lower is better) Translates to: DLVHAEHTGSVEDILQERWVNTS*SVRIMT Trigger: AGTCATAATCCTCACACTCCAACTTGTATTAACCCA...CCTTTCTTGAAGTATGTCCTCAACACTGCCAGTGTGTTCTGCGTGCACCAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CAA 90 bp | GAGGATAACCGTGTGACCTGGTGCACGCAGAACACACTGGCAGTGTaGAGGACATACTTCAAGAAAGGCTGTTACCAATCTTTTATATTA | + |
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Preference number: 2 (lower is better) Translates to: EDNRVTWCTQNTLAV*RTYFKKGCYQSFIL Trigger: TAATATAAAAGATTGGTAACAGCCTTTCTTGAAGTATGTCCTCAACACTGCCAGTGTGTTCTGCGTGCACCAGGTCACACGGTTATCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGTGTTTGTAACCTATTGCCCACTAGCAAGGAGCCCTCTGATATACAGTTGGGACCCAGCCACTTaGTACAGTACTCAAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: FKVFVTYCPLARSPLIYSWDPAT*YSTQKY Trigger: GTACTTTTGAGTACTGTAGCAAGTGGCTGGGTCCCA...ACTGTATATCAGAGGGCTCCTTGCTAGTGGGCAATAGGTTACAAACACTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CCA 90 bp | TTCAAAGTGTTTGTAACCTATTGCCCACTAGCAAGGAGCCCTCTGATATACAGTTTTTACTTCAGCAAATaGGAGCCTGGGTTAATACAA | + |
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Preference number: 2 (lower is better) Translates to: FKVFVTYCPLARSPLIYSFYFSK*EPGLIQ Trigger: TTGTATTAACCCAGGCTCCCATTTGCTGAAGTAAAA...ACTGTATATCAGAGGGCTCCTTGCTAGTGGGCAATAGGTTACAAACACTTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 72 bp | GGGCATCGGGTTAGCAGGGCTGGAGGTGCTGAGAGTTaGAGAGCCTTCCCCGGGGATGCATCACAGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GHRVSRAGGAES*RAFPGDASQSG Trigger: CCCACTCTGTGATGCATCCCCGGGGAAGGCTCTCCAACTCTCAGCACCTCCAGCCCTGCTAACCCGATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR TCA 72 bp | AGGTCGCCAGGCTTGGCTGCAACCATCTTGACTCACTaGGCCATCTCCTTGGACGCCCACCCCCGCCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: RSPGLAATILTH*AISLDAHPRLF Trigger: AAAAAGGCGGGGGTGGGCGTCCAAGGAGATGGCTCAGTGAGTCAAGATGGTTGCAGCCAAGCCTGGCGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | TGTAGACCAGGTTGGCCTCGAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCLPSAGIKGV Trigger: CACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAACCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | TATGCTGAAGTCACTGGTATAGTGGCTCTCAGGTGCTaGCAAGTGTCCAGGGTGGGCATCGGGTTAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: YAEVTGIVALRC*QVSRVGIGLAG Trigger: CCCTGCTAACCCGATGCCCACCCTGGACACTTGGCAGCACCTGAGAGCCACTATACCAGTGACTTCAGCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | CGCTATGCTGAAGTCACTGGTATAGTGGCTCTCAGGTaGTGCCAAGTGTCCAGGGTGGGCATCGGGTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: RYAEVTGIVALR*CQVSRVGIGLA Trigger: TGCTAACCCGATGCCCACCCTGGACACTTGGCAGCACCTGAGAGCCACTATACCAGTGACTTCAGCATAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTCTCAGGTCGCCAGGCTaGGCTGCAACCATCTTGACT | + |
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Preference number: 3 (lower is better) Translates to: GQRTTCRSWFSSSTMSPCLRSPG*AATILT Trigger: AGTCAAGATGGTTGCAGCCAAGCCTGGCGACCTGAG...ACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | CATGCCAAGGCACACATGTGGGGGCAGAGGACAACTTaGAGGAGCTGGTTCTCTTCTTCCACCATGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: HAKAHMWGQRTT*RSWFSSSTMSP Trigger: TGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCCCCACATGTGTGCCTTGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CAA 90 bp | GCGCCCTCTGCTGACTTCTGCTGGTACCACACACACGCATGGTACACAGATGTAGTGAGGATTATGACTTaGAGAAGGCAGGCTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: APSADFCWYHTHAWYTDVVRIMT*RRQAPP Trigger: TGGAGGAGCCTGCCTTCTCAAAGTCATAATCCTCAC...TACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | TCAGTTCCAAGGAACTCAGCGCCCTCTGCTGACTTCTaGTGGTACCACACACACGCATGGTACACAGATGTA | + |
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Preference number: 3 (lower is better) Translates to: SVPRNSAPSADF*WYHTHAWYTDV Trigger: TACATCTGTGTACCATGCGTGTGTGTGGTACCAGCAGAAGTCAGCAGAGGGCGCTGAGTTCCTTGGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 72 bp | AGTTTGCCCTGGCCTTACAGAAGTCGGAAGAGCATCTaGAATCAAGCCACAGACTCCTTAATGGGACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SLPWPYRSRKSI*NQATDSLMGPS Trigger: GCTGGGTCCCATTAAGGAGTCTGTGGCTTGATTCCAGATGCTCTTCCGACTTCTGTAAGGCCAGGGCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCATTTCCCACATAGTGGCTCACAACACCCATACCCTCAGTTCCAAGGAAAGTGTTTGTAACCTATaGCCCACTAGCAAGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SFISHIVAHNTHTLSSKESVCNL*PTSKEP Trigger: GGGCTCCTTGCTAGTGGGCAATAGGTTACAAACACT...TTCCTTGGAACTGAGGGTATGGGTGTTGTGAGCCACTATGTGGGAAATGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | CTTGAAGTTTTATTCTCAGTGCTGGTGATAGGATCCTaGGTCTCATACAAGCTTGACACGTGCTGTGCACGT | + |
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Preference number: 3 (lower is better) Translates to: LEVLFSVLVIGS*VSYKLDTCCAR Trigger: ACGTGCACAGCACGTGTCAAGCTTGTATGAGACGCAGGATCCTATCACCAGCACTGAGAATAAAACTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 72 bp | GTTCAAATCATCCTGAGACCACATACCTGGAAAACATaGATCAGCGTGCATCCTTGCAAGGTTACTAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: VQIILRPHTWKT*ISVHPCKVTRD Trigger: ATCCCTAGTAACCTTGCAAGGATGCACGCTGATCCATGTTTTCCAGGTATGTGGTCTCAGGATGATTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 72 bp | TTACTTCAGCAAATGGGAGCCTGGGTTAATACAAGTTaGAGTGTGAGGATTATGACTTTGAGAAGGCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: LLQQMGAWVNTS*SVRIMTLRRQA Trigger: AGCCTGCCTTCTCAAAGTCATAATCCTCACACTCCAACTTGTATTAACCCAGGCTCCCATTTGCTGAAGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | AACAACAACAACAACAACAACAAACTTAAGTGCTCTTaGAGACGACCAAGACCAAGCTTCATTTCCCACATA | + |
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Preference number: 3 (lower is better) Translates to: NNNNNNNKLKCS*RRPRPSFISHI Trigger: TATGTGGGAAATGAAGCTTGGTCTTGGTCGTCTGCAAGAGCACTTAAGTTTGTTGTTGTTGTTGTTGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR GCA 72 bp | AACAACAACAACAACAACAACAACAACAAACTTAAGTaGTCTTGCAGACGACCAAGACCAAGCTTCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: NNNNNNNNNKLK*SCRRPRPSFIS Trigger: GGAAATGAAGCTTGGTCTTGGTCGTCTGCAAGAGCACTTAAGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CCA 72 bp | GAAAACTCAGTACTTTTACTTCAGCAAATGGGAGCCTaGGTTAATACAAGTTGGAGTGTGAGGATTATGACT | + |
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Preference number: 3 (lower is better) Translates to: ENSVLLLQQMGA*VNTSWSVRIMT Trigger: AGTCATAATCCTCACACTCCAACTTGTATTAACCCAGGCTCCCATTTGCTGAAGTAAAAGTACTGAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR TCA 90 bp | AGTTGGAGTGTGAGGATTATGACTTTGAGAAGGCAGGCTCCTCCACGAGGGTATGGCGCAGCAGCTTGTTaGCGGCCTGGAGAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SWSVRIMTLRRQAPPRGYGAAAC*RPGEEP Trigger: AGGCTCTTCTCCAGGCCGTCAACAAGCTGCTGCGCC...ATACCCTCGTGGAGGAGCCTGCCTTCTCAAAGTCATAATCCTCACACTCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTGCAGCCAGGAAAGAGTaGATCTGGTGGGTCTCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GQRTTCRSWFSSSTMSPCAARKE*IWWVSP Trigger: AGGCGAGACCCACCAGATGCACTCTTTCCTGGCTGC...ACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CAA 72 bp | ACATGCCAAGGCACACATGTGGGGGCAGAGGACAACTaGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACC | + |
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Preference number: 4 (lower is better) Translates to: TCQGTHVGAEDN*QELVLFFHHVT Trigger: GGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCCCCACATGTGTGCCTTGGCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTGTCATCACCAGTGCATaGGGGGCCCGGATTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: GQRTTCRSWFSSSTMSPCVITSA*GARILT Trigger: AGTCAAAATCCGGGCCCCTCATGCACTGGTGATGAC...ACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR TCA 90 bp | AGTTGGAGTGTGAGGATTATGACTTTGAGAAGGCAGGCTCCTCCACGAGGGTATGGAACGGGTCCCACTTaGGCGCAGGGATATAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SWSVRIMTLRRQAPPRGYGTGPT*AQGYSP Trigger: AGGGCTATATCCCTGCGCTCAAGTGGGACCCGTTCC...ATACCCTCGTGGAGGAGCCTGCCTTCTCAAAGTCATAATCCTCACACTCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR GCA 90 bp | GGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTCTTCCACCATGTCACCATGTAAGTCTGAGAGGTCGTaGCACACGTTGCTGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GQRTTCRSWFSSSTMSPCKSERS*HTLLSS Trigger: CGAGGACAGCAACGTGTGGCACGACCTCTCAGACTT...ACATGGTGACATGGTGGAAGAAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR GCA 90 bp | ATGCCAAGGCACACATGTGGGGGCAGAGGACAACTTGCAGGAGCTGGTTCTCTTAAAGGTCATCACCAGTaGATGAGGGGCCCGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: MPRHTCGGRGQLAGAGSLKGHHQ*MRGPDF Trigger: AAAATCCGGGCCCCTCATGCACTGGTGATGACCTTT...AAGAGAACCAGCTCCTGCAAGTTGTCCTCTGCCCCCACATGTGTGCCTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR CCA 90 bp | AGCTTCATTTCCCACATAGTGGCTCACAACACCCATACCCTCAGTTCCAAGGAAGGGAGGGCTGCAGAGTaGGCCGGTGGTACTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SFISHIVAHNTHTLSSKEGRAAE*AGGTQK Trigger: TTTTTGAGTACCACCGGCCCACTCTGCAGCCCTCCC...TTCCTTGGAACTGAGGGTATGGGTGTTGTGAGCCACTATGTGGGAAATGAAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR GCA 90 bp | TCAGAAGAAGGTGTAGGAGTCCTTGGGACTGGAGTGACAGATGACTGGGAACCAAAAGGTCATCACCAGTaGATGAGGGGCCCGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: SEEGVGVLGTGVTDDWEPKGHHQ*MRGPDF Trigger: AAAATCCGGGCCCCTCATGCACTGGTGATGACCTTT...TGGTTCCCAGTCATCTGTCACTCCAGTCCCAAGGACTCCTACACCTTCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109703.3 |
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| CDS-3UTR CCA 90 bp | CTGGCCTTACAGAAGTCGGAAGAGCATCTGGAATCAAGCCACAGACTCCTTAATCGTAGAGGTAGGTCATaGAGGACTGTAGGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LALQKSEEHLESSHRLLNRRGRS*RTVGRA Trigger: AGCCCTCCCTACAGTCCTCCATGACCTACCTCTACG...ATTAAGGAGTCTGTGGCTTGATTCCAGATGCTCTTCCGACTTCTGTAAGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| 3UTR CAA 72 bp | CGTGTGACCTGGTGCACGCAGAACACACTGGCAGTGTaGAGGACATACTTCAAGAAAGGCTGTTACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: RVTWCTQNTLAV*RTYFKKGCYQS Trigger: AGATTGGTAACAGCCTTTCTTGAAGTATGTCCTCAACACTGCCAGTGTGTTCTGCGTGCACCAGGTCACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR TCA 90 bp | GTACAAGTGTTTTGCCTGCATGTTTGTATATCACATGAGGTGCCTGTAGACCTCGTCATCACCAGTGCATaGGGGGCCCGGATTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: VQVFCLHVCISHEVPVDLVITSA*GARILT Trigger: AGTCAAAATCCGGGCCCCTCATGCACTGGTGATGAC...GAGGTCTACAGGCACCTCATGTGATATACAAACATGCAGGCAAAACACTTGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109703.3 |
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| 3UTR CAA 72 bp | TGGGTTAATACAAGTTGGAGTGTGAGGATTATGACTTaGAGAAGGCAGGCTCCTCCACGAGGGTATGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: WVNTSWSVRIMT*RRQAPPRGYAN Trigger: GTTGGCATACCCTCGTGGAGGAGCCTGCCTTCTCAAAGTCATAATCCTCACACTCCAACTTGTATTAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR TCA 90 bp | CTATTTTATGTGTACAAGTGTTTTGCCTGCATGTTTGTATATCACATGAGGTGCGGCGCAGCAGCTTGTTaGCGGCCTGGAGAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LFYVYKCFACMFVYHMRCGAAAC*RPGEEP Trigger: AGGCTCTTCTCCAGGCCGTCAACAAGCTGCTGCGCC...GCACCTCATGTGATATACAAACATGCAGGCAAAACACTTGTACACATAAAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109703.3 |
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| CDS-3UTR TCA 90 bp | GTGTTTTGCCTGCATGTTTGTATATCACATGAGGTGCCTGTAGACCTCAGAAGATGTACCTGCCGCTCCTaGAGAGAAAGGTCATCACCA | + |
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Preference number: 4 (lower is better) Translates to: VFCLHVCISHEVPVDLRRCTCRS*RERSSP Trigger: TGGTGATGACCTTTCTCTTCAGGAGCGGCAGGTACA...TCTTCTGAGGTCTACAGGCACCTCATGTGATATACAAACATGCAGGCAAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109703.3 |
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| CDS TCA 90 bp | CGAGCCCCCAAATCACCGCAGTGTGCAAGGGGAACGGGTCCCACTTaGGCGCAGGGATATAGCCCTTCTCCACACCCAGGCGGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: RAPKSPQCARGTGPT*AQGYSPSPHPGGTR Trigger: CCTTGTGCCGCCTGGGTGTGGAGAAGGGCTATATCCCTGCGCTCAAGTGGGACCCGTTCCCCTTGCACACTGCGGTGATTTGGGGGCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS TCA 90 bp | ATAGCCCTTCTCCACACCCAGGCGGCACAAGGCGTACAGGACGCGTaGGGTCAGGTACATGTTGATCTGGCTATTAATGTTATTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: IALLHTQAAQGVQDA*GQVHVDLAINVIVL Trigger: GAGAACAATAACATTAATAGCCAGATCAACATGTACCTGACCTCACGCGTCCTGTACGCCTTGTGCCGCCTGGGTGTGGAGAAGGGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR CAA 90 bp | AGCAGTCAGGAGGAAGGAGAAACTCGCTATGCTGAAGTCACTGGTATAGTGGCTGAGGGGTGGCTCTTGTaGAAGATGAGGAAGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSQEEGETRYAEVTGIVAEGWLL*KMRKSE Trigger: CTCAGACTTCCTCATCTTCAACAAGAGCCACCCCTC...AGCCACTATACCAGTGACTTCAGCATAGCGAGTTTCTCCTTCCTCCTGACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR CAA 90 bp | AGCAGTCAGGAGGAAGGAGAAACTCGCTATGCTGAAGTCACTGGTATAGTGGCTGAGGTCAGGTACATGTaGATCTGGCTATTAATGTTA | + |
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Preference number: 5 (lower is better) Translates to: SSQEEGETRYAEVTGIVAEVRYM*IWLLML Trigger: TAACATTAATAGCCAGATCAACATGTACCTGACCTC...AGCCACTATACCAGTGACTTCAGCATAGCGAGTTTCTCCTTCCTCCTGACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS-3UTR CAA 90 bp | TTCAAAGTGTTTGTAACCTATTGCCCACTAGCAAGGAGCCCTCTGATATACAGTTGGCTATTAATGTTATaGTTCTCTCCAAACAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: FKVFVTYCPLARSPLIYSWLLML*FSPNSR Trigger: CCTGCTGTTTGGAGAGAACAATAACATTAATAGCCA...ACTGTATATCAGAGGGCTCCTTGCTAGTGGGCAATAGGTTACAAACACTTTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS TCA 72 bp | AAATCACCGCAGTGTGCAAGGGGAACGGGTCCCACTTaGGCGCAGGGATATAGCCCTTCTCCACACCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: KSPQCARGTGPT*AQGYSPSPHPG Trigger: GCCTGGGTGTGGAGAAGGGCTATATCCCTGCGCTCAAGTGGGACCCGTTCCCCTTGCACACTGCGGTGATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS GCA 72 bp | GAGACTGCCGCTCCTGAAGAGAAAGGTCATCACCAGTaGATGAGGGGCCCGGATTTTGACTCCATAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: ETAAPEEKGHHQ*MRGPDFDSIDS Trigger: GCTGTCTATGGAGTCAAAATCCGGGCCCCTCATGCACTGGTGATGACCTTTCTCTTCAGGAGCGGCAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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| CDS GCA 72 bp | GTACCTGCCGCTCCTGAAGAGAAAGGTCATCACCAGTaGATGAGGGGCCCGGATTTTGACTCCATAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: VPAAPEEKGHHQ*MRGPDFDSIDS Trigger: GCTGTCTATGGAGTCAAAATCCGGGCCCCTCATGCACTGGTGATGACCTTTCTCTTCAGGAGCGGCAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109703.3 |
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| CDS TCA 72 bp | CTCCACACCCAGGCGGCACAAGGCGTACAGGACGCGTaGGGTCAGGTACATGTTGATCTGGCTATTAATGTT | + |
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Preference number: 6 (lower is better) Translates to: LHTQAAQGVQDA*GQVHVDLAINV Trigger: AACATTAATAGCCAGATCAACATGTACCTGACCTCACGCGTCCTGTACGCCTTGTGCCGCCTGGGTGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000896.11 |
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