Pregenerated sensors for PXMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029499Ensembl transcript IDs: ENSMUST00000031472.12, ENSMUST00000155266.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACCCACACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTTCTGTTCTCTCCTGCTaGTGGATGGATCTCCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: THTFPPSVILRHRESHHISVLSC*WMDLPR Trigger: TCTGGGGAGATCCATCCACCAGCAGGAGAGAACAGA...AATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGTGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTTCTCTTTGCTCACAGTaGCAACTTAGACTAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: THTFPPSVILRHRESHHISLCSQ*QLRLTP Trigger: TGGAGTTAGTCTAAGTTGTCACTGTGAGCAAAGAGA...AATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGTGTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTAGCCAGTTGATGTTAATGAACTaGAAAGGTGTCCACATCCTC | + |
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Preference number: 2 (lower is better) Translates to: TFPPSVILRHRESHHISQLMLMN*KGVHIL Trigger: GAGGATGTGGACACCTTTGCAGTTCATTAACATCAA...CTGGCTAATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155266.2 |
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| 3UTR GCA 72 bp | CAGATGGTGTCCTTAATGATGGATTCTGTTCTCTCCTaGTGGTGGATGGATCTCCCCAGACCCCATCCGCGG | + |
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Preference number: 3 (lower is better) Translates to: QMVSLMMDSVLS*WWMDLPRPHPR Trigger: CCGCGGATGGGGTCTGGGGAGATCCATCCACCAGCAGGAGAGAACAGAATCCATCATTAAGGACACCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| 3UTR-3UTR CAA 90 bp | GAATCACATCATATTAGCCAGATGGTGTCCTTAATGATGGATTCTGTTCTCTCCCATCCTCCAGTTCATTaGCAGTGCGGGCCAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ESHHISQMVSLMMDSVLSHPPVH*QCGPEA Trigger: GGCTTCTGGCCCGCACTGCAAATGAACTGGAGGATG...GGAGAGAACAGAATCCATCATTAAGGACACCATCTGGCTAATATGATGTGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155266.2 |
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| CDS-3UTR TCA 90 bp | ATGGATTCTGTTCTCTCCTGCTGGTGGATGGATCTCCCCAGACCCCATCCGCGGAAGGTTTCCAAGGGCTaGCAAAATGCCGCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: MDSVLSCWWMDLPRPHPRKVSKG*QNAAAD Trigger: GTCAGCAGCGGCATTTTGTCAGCCCTTGGAAACCTT...CCGCGGATGGGGTCTGGGGAGATCCATCCACCAGCAGGAGAGAACAGAATCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR CCA 90 bp | TCTGTTCTCTCCTGCTGGTGGATGGATCTCCCCAGACCCCATCCGCGGTGTATCCGCTTCTCAATCGTCTaGGCCAGAAGGTTTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLSCWWMDLPRPHPRCIRFSIV*ARRFPR Trigger: CCTTGGAAACCTTCTGGCCCAGACGATTGAGAAGCG...GATACACCGCGGATGGGGTCTGGGGAGATCCATCCACCAGCAGGAGAGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR TCA 90 bp | ACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTAGCCAGCCAGCAGGAGCCTCTTaGCGCTGGCCCAGGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: TFPPSVILRHRESHHISQPAGAS*RWPREP Trigger: AGGTTCCCTGGGCCAGCGTCAAGAGGCTCCTGCTGG...CTGGCTAATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR GCA 90 bp | GAAGCACATGATTCTGACACCCACACATTTCCTCCCTCTGTAATTTTAAGGCATAATGCCGCTGCTGACTaGTTTGGTGAGCACCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EAHDSDTHTFPPSVILRHNAAAD*FGEHRV Trigger: TACCCGGTGCTCACCAAAGCAGTCAGCAGCGGCATT...ATGCCTTAAAATTACAGAGGGAGGAAATGTGTGGGTGTCAGAATCATGTGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR GCA 90 bp | ACACAGCTGCATCACCATTTATTGACCTTTTATCTCCTTGTTCACAGTGACAACCCAGTTCATTTGCAGTaGGGGCCAGAAGCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: TQLHHHLLTFYLLVHSDNPVHLQ*GPEATP Trigger: AGGAGTGGCTTCTGGCCCGCACTGCAAATGAACTGG...GTTGTCACTGTGAACAAGGAGATAAAAGGTCAATAAATGGTGATGCAGCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR TCA 90 bp | CAGACACAGCTGCATCACCATTTATTGACCTTTTATCTCCTTGTTCACAGTGACGGACCGAGTATTCCATaGAGAGGTAGAGGTAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QTQLHHHLLTFYLLVHSDGPSIP*RGRGSD Trigger: GTCACTACCTCTACCTCTTCATGGAATACTCGGTCC...GTCACTGTGAACAAGGAGATAAAAGGTCAATAAATGGTGATGCAGCTGTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR TCA 90 bp | GAAGCACATGATTCTGACACCCACACATTTCCTCCCTCTGTAATTTTAAGGCATCCTCCAGCAAGTTCATaGCGAAGAAGAACAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EAHDSDTHTFPPSVILRHPPASS*RRRTAA Trigger: TGCTGCTGTTCTTCTTCGTCATGAACTTGCTGGAGG...ATGCCTTAAAATTACAGAGGGAGGAAATGTGTGGGTGTCAGAATCATGTGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR TCA 90 bp | CCTTTTATCTCCTTGTTCACAGTGACAACTAAGATAATCTCTTTGCTCACAGTGAAGGTTTCCAAGGGCTaGCAAAATGCCGCTGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: PFISLFTVTTKIISLLTVKVSKG*QNAAAD Trigger: GTCAGCAGCGGCATTTTGTCAGCCCTTGGAAACCTT...CACTGTGAGCAAAGAGATTATCTTAGTTGTCACTGTGAACAAGGAGATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR TCA 90 bp | AGACTAACTCCACCAAGACTCTCTGAAGCACATGATTCTGACACCCACACATTTTGGCAACAAAGACACTaGCGTTTTTCCCCCATAAAC | + |
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Preference number: 4 (lower is better) Translates to: RLTPPRLSEAHDSDTHTFWQQRH*RFSPIN Trigger: GTTTATGGGGGAAAAACGTCAGTGTCTTTGTTGCCA...AAATGTGTGGGTGTCAGAATCATGTGCTTCAGAGAGTCTTGGTGGAGTTAGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000155266.2 |
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| CDS-3UTR GCA 90 bp | ATTTTAAGGCATCGTGAATCACATCATATTAGCCAGATGGTGTCCTTAATGATGAATGCCGCTGCTGACTaGTTTGGTGAGCACCGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ILRHRESHHISQMVSLMMNAAAD*FGEHRV Trigger: TACCCGGTGCTCACCAAAGCAGTCAGCAGCGGCATT...CATCATTAAGGACACCATCTGGCTAATATGATGTGATTCACGATGCCTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTATCTCCTTGTTCACAGTGACAACTAAGATAATCTCTTTGCTCACAGTGCGCTTCTCAATCGTCTaGGCCAGAAGGTTTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PFISLFTVTTKIISLLTVRFSIV*ARRFPR Trigger: CCTTGGAAACCTTCTGGCCCAGACGATTGAGAAGCG...CACTGTGAGCAAAGAGATTATCTTAGTTGTCACTGTGAACAAGGAGATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS-3UTR TCA 90 bp | CCTTTTATCTCCTTGTTCACAGTGACAACTAAGATAATCTCTTTGCTCACAGTGTGGCAACAAAGACACTaGCGTTTTTCCCCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PFISLFTVTTKIISLLTVWQQRH*RFSPPA Trigger: TGCTGGAGGGGAAAAACGTCAGTGTCTTTGTTGCCA...CACTGTGAGCAAAGAGATTATCTTAGTTGTCACTGTGAACAAGGAGATAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CCA 90 bp | CCCCTCCAGCAAGTTCATGACGAAGAAGAACAGCAGCAGAAAAGTTaGGGCAAAGAACAGGCGATCCAGCAGGAGCCTCTTGACGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: PLQQVHDEEEQQQKS*GKEQAIQQEPLDAG Trigger: GCCAGCGTCAAGAGGCTCCTGCTGGATCGCCTGTTCTTTGCCCCAACTTTTCTGCTGCTGTTCTTCTTCGTCATGAACTTGCTGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR CAA 90 bp | ACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTAGCCAGTCCAGCAGGAGCCTCTaGACGCTGGCCCAGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: TFPPSVILRHRESHHISQSSRSL*TLAQGT Trigger: GGTTCCCTGGGCCAGCGTCAAGAGGCTCCTGCTGGA...CTGGCTAATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR CAA 90 bp | ACCCACACATTTCCTCCCTCTGTAATTTTAAGGCATCGTGAATCACATCATATTCATCCTCCAGTTCATTaGCAGTGCGGGCCAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: THTFPPSVILRHRESHHIHPPVH*QCGPEA Trigger: GGCTTCTGGCCCGCACTGCAAATGAACTGGAGGATG...AATATGATGTGATTCACGATGCCTTAAAATTACAGAGGGAGGAAATGTGTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR CAA 90 bp | TTAAGGCATCGTGAATCACATCATATTAGCCAGATGGTGTCCTTAATGATGGATACAGCAGCAGAAAAGTaGGGGCAAAGAACAGGCGAT | + |
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Preference number: 5 (lower is better) Translates to: LRHRESHHISQMVSLMMDTAAEK*GQRTGD Trigger: ATCGCCTGTTCTTTGCCCCAACTTTTCTGCTGCTGT...ATCCATCATTAAGGACACCATCTGGCTAATATGATGTGATTCACGATGCCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS-3UTR CAA 90 bp | CATCGTGAATCACATCATATTAGCCAGATGGTGTCCTTAATGATGGATTCTGTTAAGCCACTCCTCATCTaGGCAACAAAGACACTGACG | + |
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Preference number: 5 (lower is better) Translates to: HRESHHISQMVSLMMDSVKPLLI*ATKTLT Trigger: CGTCAGTGTCTTTGTTGCCAAGATGAGGAGTGGCTT...AACAGAATCCATCATTAAGGACACCATCTGGCTAATATGATGTGATTCACGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CCA 72 bp | GCTTTAGGAGCAGCAAGTATTGGGCGAGCGCTCGCTTaGGAAGCGACCCGAGCTCGGATTCCACCCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ALGAASIGRALA*EATRARIPPAA Trigger: GGCTGCGGGTGGAATCCGAGCTCGGGTCGCTTCCCAAGCGAGCGCTCGCCCAATACTTGCTGCTCCTAAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS CAA 72 bp | GTTGGGGCAAAGAACAGGCGATCCAGCAGGAGCCTCTaGACGCTGGCCCAGGGAACCTCAGGAGGGACCGAG | + |
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Preference number: 6 (lower is better) Translates to: VGAKNRRSSRSL*TLAQGTSGGTE Trigger: CTCGGTCCCTCCTGAGGTTCCCTGGGCCAGCGTCAAGAGGCTCCTGCTGGATCGCCTGTTCTTTGCCCCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS TCA 72 bp | TTGGGGCAAAGAACAGGCGATCCAGCAGGAGCCTCTTaGCGCTGGCCCAGGGAACCTCAGGAGGGACCGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGQRTGDPAGAS*RWPREPQEGPS Trigger: ACTCGGTCCCTCCTGAGGTTCCCTGGGCCAGCGTCAAGAGGCTCCTGCTGGATCGCCTGTTCTTTGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CAA 72 bp | AGCTTTAGGAGCAGCAAGTATTGGGCGAGCGCTCGCTaGGGAAGCGACCCGAGCTCGGATTCCACCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFRSSKYWASAR*GSDPSSDSTRS Trigger: GCTGCGGGTGGAATCCGAGCTCGGGTCGCTTCCCAAGCGAGCGCTCGCCCAATACTTGCTGCTCCTAAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031472.12 ENSMUST00000155266.2 |
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| CDS CAA 90 bp | AGCAGAAAAGTTGGGGCAAAGAACAGGCGATCCAGCAGGAGCCTCTaGACGCTGGCCCAGGGAACCTCAGGAGGGACCGAGTATTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SRKVGAKNRRSSRSL*TLAQGTSGGTEYSM Trigger: CATGGAATACTCGGTCCCTCCTGAGGTTCCCTGGGCCAGCGTCAAGAGGCTCCTGCTGGATCGCCTGTTCTTTGCCCCAACTTTTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS GCA 72 bp | CTGCAAAGGTGTCCACATCCTCCAGTTCATTTGCAGTaGGGGCCAGAAGCCACTCCTCATCTTGGCAACAAA | + |
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Preference number: 6 (lower is better) Translates to: LQRCPHPPVHLQ*GPEATPHLGNK Trigger: TTTGTTGCCAAGATGAGGAGTGGCTTCTGGCCCGCACTGCAAATGAACTGGAGGATGTGGACACCTTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CAA 72 bp | TTCATTTGCAGTGCGGGCCAGAAGCCACTCCTCATCTaGGCAACAAAGACACTGACGTTTTTCCCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: FICSAGQKPLLI*ATKTLTFFPSS Trigger: GCTGGAGGGGAAAAACGTCAGTGTCTTTGTTGCCAAGATGAGGAGTGGCTTCTGGCCCGCACTGCAAATGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CAA 90 bp | ATCCTCCAGTTCATTTGCAGTGCGGGCCAGAAGCCACTCCTCATCTaGGCAACAAAGACACTGACGTTTTTCCCCTCCAGCAAGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: ILQFICSAGQKPLLI*ATKTLTFFPSSKFM Trigger: CATGAACTTGCTGGAGGGGAAAAACGTCAGTGTCTTTGTTGCCAAGATGAGGAGTGGCTTCTGGCCCGCACTGCAAATGAACTGGAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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| CDS CCA 72 bp | CAAGTTCATGACGAAGAAGAACAGCAGCAGAAAAGTTaGGGCAAAGAACAGGCGATCCAGCAGGAGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QVHDEEEQQQKS*GKEQAIQQEPL Trigger: AAGAGGCTCCTGCTGGATCGCCTGTTCTTTGCCCCAACTTTTCTGCTGCTGTTCTTCTTCGTCATGAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031472.12 |
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