Pregenerated sensors for PXDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021411Ensembl transcript IDs: ENSMUST00000021847.15, ENSMUST00000053459.15, ENSMUST00000125037.3
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGTAGCTTTGGCCCTTGGAGGAGCACAGTAGACAGCATGAGGACATaGAGTCGAGGTTGGAGGCAGAGAAGGCCCGATGGAGAGGCTCAG | + |
Preference number: 1 (lower is better) Translates to: SSFGPWRSTVDSMRT*SRGWRQRRPDGEAQ Trigger: CTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTCCTCCAAGGGCCAAAGCTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR CCA 90 bp | CAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCCGATaGAGAGGCTCAGTCCAAAATGTCCGTCTCAAACGGAACCAAATG | + |
Preference number: 1 (lower is better) Translates to: QHEDMQSRLEAEKAR*RGSVQNVRLKRNQM Trigger: CATTTGGTTCCGTTTGAGACGGACATTTTGGACTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR GCA 90 bp | CCATCTTCCAGCTCTGAGGTGAACTCACCACCATTCTCAAACAAATaGTCTGTGGAATCCGCATCCAGGAGCTGGTCCTTCCCGTTGGGT | + |
Preference number: 1 (lower is better) Translates to: PSSSSEVNSPPFSNK*SVESASRSWSFPLG Trigger: ACCCAACGGGAAGGACCAGCTCCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR TCA 90 bp | CCGCATCCAGGAGCTGGTCCTTCCCGTTGGGTATGCTGTGGTCAATaGCTATGGTCTCTGTGTTTGCCAAACAAAATCCATTGGACCTCA | + |
Preference number: 1 (lower is better) Translates to: PHPGAGPSRWVCCGQ*LWSLCLPNKIHWTS Trigger: TGAGGTCCAATGGATTTTGTTTGGCAAACACAGAGACCATAGTCATTGACCACAGCATACCCAACGGGAAGGACCAGCTCCTGGATGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCCCTGGAGACAGCATGAGGACATaGAGTCGAGGTTGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: LAEELTGAGSEEDALFPGDSMRT*SRGWRQ Trigger: CTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTC...TCCAGGGAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCCCTGGAGATCCCGTGTGCCTCTaGTTTCTAAATACCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: LAEELTGAGSEEDALFPGDPVCL*FLNTQA Trigger: GGCCTGGGTATTTAGAAAGCAGAGGCACACGGGATC...TCCAGGGAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR CCA 90 bp | CACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCAGACAAGAAGAAGCATaGCCTGGCATCCCAGAAGAG | + |
Preference number: 2 (lower is better) Translates to: HRLAEELTGAGSEEDALFRQEEA*PGIPEE Trigger: CTCTTCTGGGATGCCAGGCCATGCTTCTTCTTGTCT...GAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR CCA 90 bp | ATCCCTTCCTTTCTGATCCATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAAGAAGAAGCATGGCCTaGCATCCCAGAAGAGGCGGG | + |
Preference number: 2 (lower is better) Translates to: IPSFLIHPGTCAIEVSRGRRSMA*HPRRGG Trigger: CCCGCCTCTTCTGGGATGCCAGGCCATGCTTCTTCT...TCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATGGATCAGAAAGGAAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | ACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTAGGCAGTGGTAATAGGACAAGTTGGTaGCATAAGCCTCTGGGTCGT | + |
Preference number: 2 (lower is better) Translates to: TCAIEVSRGRTSSTLGSGNRTSW*HKPLGR Trigger: ACGACCCAGAGGCTTATGTCACCAACTTGTCCTATT...ACCACTGCCTAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | CCGCATCACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTATTTTAACAGGACTTTaGAAGCTGGGTTGGATCTTA | + |
Preference number: 2 (lower is better) Translates to: PHHRLAEELTGAGSEEDAILTGL*KLGWIL Trigger: TAAGATCCAACCCAGCTTTCAAAGTCCTGTTAAAAT...AGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTGATGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CAATCTTCTCCAGGCTTGATGTTGTGTAAACGCTCCTTCCGGCTCATCCCAAACGACAGCATGAGGACATaGAGTCGAGGTTGGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: QSSPGLMLCKRSFRLIPNDSMRT*SRGWRQ Trigger: CTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTC...GTTTGGGATGAGCCGGAAGGAGCGTTTACACAACATCAAGCCTGGAGAAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CTTAGGGAGGTCCTGAATCACTTAATATCCCCCGTCCACGAGGTCCAGAACTTGGATCCCGTGTGCCTCTaGTTTCTAAATACCCAGGCC | + |
Preference number: 2 (lower is better) Translates to: LREVLNHLISPVHEVQNLDPVCL*FLNTQA Trigger: GGCCTGGGTATTTAGAAAGCAGAGGCACACGGGATC...CAAGTTCTGGACCTCGTGGACGGGGGATATTAAGTGATTCAGGACCTCCCTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR CCA 90 bp | CATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTAGGACGCTCTCTTCCCTaGAAGAAAACTTTATATCAG | + |
Preference number: 2 (lower is better) Translates to: HPGTCAIEVSRGRTSSTLGRSLP*KKTLYQ Trigger: CTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCC...TAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CAATCTTCTCCAGGCTTGATGTTGTGTAAACGCTCCTTCCGGCTCATCCCAAACCATCGGGATCCCGTGTaGCTCTGCTTTCTAAATACC | + |
Preference number: 2 (lower is better) Translates to: QSSPGLMLCKRSFRLIPNHRDPV*LCFLNT Trigger: GGTATTTAGAAAGCAGAGGCACACGGGATCCCGATG...GTTTGGGATGAGCCGGAAGGAGCGTTTACACAACATCAAGCCTGGAGAAGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | TCTTCCAGCTCTGAGGTGAACTCACCACCATTCTCAAACAAATGCTCTGTGGAACTTCCAGCTCTGAGGTaGACTCACCACCATTCTCAA | + |
Preference number: 2 (lower is better) Translates to: SSSSEVNSPPFSNKCSVELPALR*THHHSQ Trigger: TTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAG...TTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | AGTGAGGAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCTCCCTAAGTCGGCAGTaGGACAAGAAGAAGCATGGC | + |
Preference number: 2 (lower is better) Translates to: SEEDALFPGRKLYIRFICSLSRQ*DKKKHG Trigger: GCCATGCTTCTTCTTGTCTCACTGCCGACTTAGGGA...GCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTCCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | GAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCACAGGACTTCCAGCTCTGAGGTaGACTCACCACCATTCTCAA | + |
Preference number: 2 (lower is better) Translates to: EDALFPGRKLYIRFICTGLPALR*THHHSQ Trigger: TTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAG...TCCTGTGCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR GCA 90 bp | CTTAGGGAGGTCCTGAATCACTTAATATCCCCCGTCCACGAGGTCCAGAACTTGTATGGTCTCTGTGTTTaGCAAACAAAATCCATTGGA | + |
Preference number: 2 (lower is better) Translates to: LREVLNHLISPVHEVQNLYGLCV*QTKSIG Trigger: TCCAATGGATTTTGTTTGGCAAACACAGAGACCATA...CAAGTTCTGGACCTCGTGGACGGGGGATATTAAGTGATTCAGGACCTCCCTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR-3UTR TCA 90 bp | GTGAGGAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCACTTTGTGTGTGCCTTTaGCACACAAGAGAAAAGTGG | + |
Preference number: 2 (lower is better) Translates to: VRRTLSSLEENFISGSYALCVCL*HTREKW Trigger: CCACTTTTCTCTTGTGTGTCAAAGGCACACACAAAG...TGCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTCCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | TGGCCTGGCATCCCAGAAGAGGCGGGCTGGAGGGGCTaGGAGCAGGAAGAAGGCCCCTCGGTGCTGCCTATG | + |
Preference number: 3 (lower is better) Translates to: WPGIPEEAGWRG*EQEEGPSVLPM Trigger: CATAGGCAGCACCGAGGGGCCTTCTTCCTGCTCTCAGCCCCTCCAGCCCGCCTCTTCTGGGATGCCAGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | GGCAGTGGTGACCGCATCACCGCCTGGCAGAAGAGCTaGCAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCC | + |
Preference number: 3 (lower is better) Translates to: GSGDRITAWQKS*QVLAVRRTLSS Trigger: GGAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTGATGCGGTCACCACTGCC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR GCA 72 bp | GGAGGGGCTGAGAGCAGGAAGAAGGCCCCTCGGTGCTaGCTATGGTCATCGGGATCCCGTGTGCCTCTGCTT | + |
Preference number: 3 (lower is better) Translates to: GGAESRKKAPRC*LWSSGSRVPLL Trigger: AAGCAGAGGCACACGGGATCCCGATGACCATAGGCAGCACCGAGGGGCCTTCTTCCTGCTCTCAGCCCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | CAGCAGGGGAAGGACTTCGAGCACCCTAGGCAGTGGTaGCCGCATCACCGCCTGGCAGAAGAGCTGACAGGT | + |
Preference number: 3 (lower is better) Translates to: QQGKDFEHPRQW*PHHRLAEELTG Trigger: ACCTGTCAGCTCTTCTGCCAGGCGGTGATGCGGTCACCACTGCCTAGGGTGCTCGAAGTCCTTCCCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | ATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCCGATGGAGAGGCTCAGGACATGCAGTCGAGGTaGGAGGCAGAGAAGGCCCGA | + |
Preference number: 3 (lower is better) Translates to: MRTCSRGWRQRRPDGEAQDMQSR*EAEKAR Trigger: TCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTC...CTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | CCTAGGAGGTCCAGGCTGAGCAGTAGCTTTGGCCCTTGGAGGAGCACAGTAGACGACATGCAGTCGAGGTaGGAGGCAGAGAAGGCCCGA | + |
Preference number: 3 (lower is better) Translates to: PRRSRLSSSFGPWRSTVDDMQSR*EAEKAR Trigger: TCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTC...GTCTACTGTGCTCCTCCAAGGGCCAAAGCTACTGCTCAGCCTGGACCTCCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR CCA 72 bp | AGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTaGAGGCAGAGAAGGCCCGATGGAGAGGCTCAGTCC | + |
Preference number: 3 (lower is better) Translates to: STVDSMRTCSRG*RQRRPDGEAQS Trigger: GGACTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR CCA 72 bp | GCTGAGAGCAGGAAGAAGGCCCCTCGGTGCTGCCTATaGTCATCGGGATCCCGTGTGCCTCTGCTTTCTAAA | + |
Preference number: 3 (lower is better) Translates to: AESRKKAPRCCL*SSGSRVPLLSK Trigger: TTTAGAAAGCAGAGGCACACGGGATCCCGATGACCATAGGCAGCACCGAGGGGCCTTCTTCCTGCTCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | CCCTTCCTTTCTGATCCATCCTGGCACTTGTGCCATTaGGGTCAGCAGGGGAAGGACTTCGAGCACCCTAGG | + |
Preference number: 3 (lower is better) Translates to: PFLSDPSWHLCH*GQQGKDFEHPR Trigger: CCTAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATGGATCAGAAAGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR CCA 72 bp | GACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCCGATaGAGAGGCTCAGTCCAAAATGTCCGTCTCAAACGG | + |
Preference number: 3 (lower is better) Translates to: DMQSRLEAEKAR*RGSVQNVRLKR Trigger: CCGTTTGAGACGGACATTTTGGACTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | ATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCCGATGGAGAGGCTCAGCTATGGTCTCTGTGTTaGCCAAACAAAATCCATTGG | + |
Preference number: 3 (lower is better) Translates to: MRTCSRGWRQRRPDGEAQLWSLC*PNKIHW Trigger: CCAATGGATTTTGTTTGGCAAACACAGAGACCATAG...CTGAGCCTCTCCATCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | CATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTAACTTTGTGTGTGCCTTaGACACACAAGAGAAAAGTG | + |
Preference number: 3 (lower is better) Translates to: HPGTCAIEVSRGRTSSTLTLCVP*THKRKV Trigger: CACTTTTCTCTTGTGTGTCAAAGGCACACACAAAGT...TAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | AAGCCTCTGGGTCGTCACCATCTTCCAGCTCTGAGGTaGACTCACCACCATTCTCAAACAAATGCTCTGTGG | + |
Preference number: 3 (lower is better) Translates to: KPLGRHHLPALR*THHHSQTNALW Trigger: CCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAGATGGTGACGACCCAGAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR GCA 72 bp | AGCTCTGAGGTGAACTCACCACCATTCTCAAACAAATaGTCTGTGGAATCCGCATCCAGGAGCTGGTCCTTC | + |
Preference number: 3 (lower is better) Translates to: SSEVNSPPFSNK*SVESASRSWSF Trigger: GAAGGACCAGCTCCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR CCA 72 bp | GCATCCAGGAGCTGGTCCTTCCCGTTGGGTATGCTGTaGTCAATGACTATGGTCTCTGTGTTTGCCAAACAA | + |
Preference number: 3 (lower is better) Translates to: ASRSWSFPLGML*SMTMVSVFAKQ Trigger: TTGTTTGGCAAACACAGAGACCATAGTCATTGACCACAGCATACCCAACGGGAAGGACCAGCTCCTGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR CCA 72 bp | TCAAACAAATGCTCTGTGGAATCCGCATCCAGGAGCTaGTCCTTCCCGTTGGGTATGCTGTGGTCAATGACT | + |
Preference number: 3 (lower is better) Translates to: SNKCSVESASRS*SFPLGMLWSMT Trigger: AGTCATTGACCACAGCATACCCAACGGGAAGGACCAGCTCCTGGATGCGGATTCCACAGAGCATTTGTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | TCCAGGCTGAGCAGTAGCTTTGGCCCTTGGAGGAGCACAGTAGACAGCATGAGGGCCAAACAAAATCCATaGGACCTCATGATTTCTGAT | + |
Preference number: 3 (lower is better) Translates to: SRLSSSFGPWRSTVDSMRAKQNP*DLMISD Trigger: ATCAGAAATCATGAGGTCCAATGGATTTTGTTTGGC...CCTCATGCTGTCTACTGTGCTCCTCCAAGGGCCAAAGCTACTGCTCAGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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3UTR TCA 72 bp | GACATAAGCCTCTGGGTCGTCACCATCTTCCAGCTCTaGGGTGAACTCACCACCATTCTCAAACAAATGCTC | + |
Preference number: 3 (lower is better) Translates to: DISLWVVTIFQL*GELTTILKQML Trigger: GAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAGATGGTGACGACCCAGAGGCTTATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | ATCCCTTCCTTTCTGATCCATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAACTTTGTGTGTGCCTTaGACACACAAGAGAAAAGTG | + |
Preference number: 3 (lower is better) Translates to: IPSFLIHPGTCAIEVSRGTLCVP*THKRKV Trigger: CACTTTTCTCTTGTGTGTCAAAGGCACACACAAAGT...TCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATGGATCAGAAAGGAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | CAGACCTTCTGTGGTCTAAGCTGTAAGCATCCCTTCCTTCCTTCCCATCCCTTCACTTTGTGTGTGCCTTaGACACACAAGAGAAAAGTG | + |
Preference number: 3 (lower is better) Translates to: QTFCGLSCKHPFLPSHPFTLCVP*THKRKV Trigger: CACTTTTCTCTTGTGTGTCAAAGGCACACACAAAGT...GAAGGGATGGGAAGGAAGGAAGGGATGCTTACAGCTTAGACCACAGAAGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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3UTR TCA 72 bp | TCTCAAACGGAACCAAATGGTAATAGGACAAGTTGGTaGCATAAGCCTCTGGGTCGTCACCATCTTCCAGCT | + |
Preference number: 3 (lower is better) Translates to: SQTEPNGNRTSW*HKPLGRHHLPA Trigger: AGCTGGAAGATGGTGACGACCCAGAGGCTTATGTCACCAACTTGTCCTATTACCATTTGGTTCCGTTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR-3UTR CAA 90 bp | AGTGAGGAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCTATTTTAACAGGACTTaGAAAGCTGGGTTGGATCTT | + |
Preference number: 3 (lower is better) Translates to: SEEDALFPGRKLYIRFICYFNRT*KAGLDL Trigger: AAGATCCAACCCAGCTTTCAAAGTCCTGTTAAAATA...GCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTCCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCGCATCACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCATCGCGGAGGCGCTTaGACAGGCGGCCCAGGTCGG | + |
Preference number: 4 (lower is better) Translates to: PHHRLAEELTGAGSEEDAHRGGA*TGGPGR Trigger: CCGACCTGGGCCGCCTGTGCAAGCGCCTCCGCGATG...AGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTGATGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCCATCGCGGAGGCGCTTaGACAGGCGGCCCAGGTCGG | + |
Preference number: 4 (lower is better) Translates to: HRLAEELTGAGSEEDALFHRGGA*TGGPGR Trigger: CCGACCTGGGCCGCCTGTGCAAGCGCCTCCGCGATG...GAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCGCATCACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCCAGGTCGGCGAAGCTaGGGTGCAGGTAGAGCACGC | + |
Preference number: 4 (lower is better) Translates to: PHHRLAEELTGAGSEEDAPGRRS*GAGRAR Trigger: GCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGG...AGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTGATGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCCCTGGACATCGCGGAGGCGCTTaGACAGGCGGCCCAGGTCGG | + |
Preference number: 4 (lower is better) Translates to: LAEELTGAGSEEDALFPGHRGGA*TGGPGR Trigger: CCGACCTGGGCCGCCTGTGCAAGCGCCTCCGCGATG...TCCAGGGAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCCAGGCCTGCTGAACCTCAGGACCCTAGGAGGTCCAGGCTGAGCAGTAGCTTTGCAGGTAGAGCACGCTaGGGTCCGACCACTCGGTGC | + |
Preference number: 4 (lower is better) Translates to: PRPAEPQDPRRSRLSSSFAGRAR*GPTTRC Trigger: GCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGC...AAAGCTACTGCTCAGCCTGGACCTCCTAGGGTCCTGAGGTTCAGCAGGCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CACCGCCTGGCAGAAGAGCTGACAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCTGTTCACGAGCGACGTaGCCTCAAACACCGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: HRLAEELTGAGSEEDALFCSRAT*PQTPPR Trigger: CCTCGGCGGTGTTTGAGGGCACGTCGCTCGTGAACA...GAAGAGAGCGTCCTCCTCACTGCCAGCACCTGTCAGCTCTTCTGCCAGGCGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCTTGGAGGAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGGCAGGTAGAGCACGCTaGGGTCCGACCACTCGGTGC | + |
Preference number: 4 (lower is better) Translates to: PWRSTVDSMRTCSRGWRQAGRAR*GPTTRC Trigger: GCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGC...CTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTCCTCCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCCATCCCTTCCTTTCTGATCCATCCTGGCACTTGTGCCATTGAGGTCAGCAGGCCAGGTCGGCGAAGCTaGGGTGCAGGTAGAGCACGC | + |
Preference number: 4 (lower is better) Translates to: PIPSFLIHPGTCAIEVSRPGRRS*GAGRAR Trigger: GCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGG...CCTGCTGACCTCAATGGCACAAGTGCCAGGATGGATCAGAAAGGAAGGGATGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | GAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCTGTTCACGAGCGACGTaGCCTCAAACACCGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: EHSRQHEDMQSRLEAEKACSRAT*PQTPPR Trigger: CCTCGGCGGTGTTTGAGGGCACGTCGCTCGTGAACA...GGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CCTGCTGAACCTCAGGACCCTAGGAGGTCCAGGCTGAGCAGTAGCTTTGGCCCTGGTCCGACCACTCGGTaGGGATTTCGAAGAACTCCT | + |
Preference number: 4 (lower is better) Translates to: PAEPQDPRRSRLSSSFGPGPTTR*GFRRTP Trigger: AGGAGTTCTTCGAAATCCGCACCGAGTGGTCGGACC...AGGGCCAAAGCTACTGCTCAGCCTGGACCTCCTAGGGTCCTGAGGTTCAGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | GAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCGGTCCGACCACTCGGTaGGGATTTCGAAGAACTCCT | + |
Preference number: 4 (lower is better) Translates to: EHSRQHEDMQSRLEAEKAGPTTR*GFRRTP Trigger: AGGAGTTCTTCGAAATCCGCACCGAGTGGTCGGACC...GGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | GGTGAACTCACCACCATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGAGGCAGGTAGAGCACGCTaGGGTCCGACCACTCGGTGC | + |
Preference number: 4 (lower is better) Translates to: GELTTILKQMLCGIRIQEAGRAR*GPTTRC Trigger: GCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGC...CTCCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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CDS-3UTR GCA 90 bp | CAGGTGCTGGCAGTGAGGAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCACCAGGTCGGCGAAGCTaGGGTGCAGGTAGAGCACGC | + |
Preference number: 4 (lower is better) Translates to: QVLAVRRTLSSLEENFISPGRRS*GAGRAR Trigger: GCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGG...TGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTCCTCACTGCCAGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR TCA 90 bp | CCTTGGAGGAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGCTTCCAGCTCTGAGGTaGACTCACCACCATTCTCAA | + |
Preference number: 4 (lower is better) Translates to: PWRSTVDSMRTCSRGWRQLPALR*THHHSQ Trigger: TTGAGAATGGTGGTGAGTTCACCTCAGAGCTGGAAG...CTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTCCTCCAAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053459.15 |
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CDS-3UTR GCA 90 bp | GAGGTGAACTCACCACCATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGTGTTCACGAGCGACGTaGCCTCAAACACCGCCGAGG | + |
Preference number: 4 (lower is better) Translates to: EVNSPPFSNKCSVESASRCSRAT*PQTPPR Trigger: CCTCGGCGGTGTTTGAGGGCACGTCGCTCGTGAACA...CCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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3UTR CAA 72 bp | TCTGTGGAATCCGCATCCAGGAGCTGGTCCTTCCCGTaGGGTATGCTGTGGTCAATGACTATGGTCTCTGTG | + |
Preference number: 4 (lower is better) Translates to: SVESASRSWSFP*GMLWSMTMVSV Trigger: CACAGAGACCATAGTCATTGACCACAGCATACCCAACGGGAAGGACCAGCTCCTGGATGCGGATTCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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CDS-3UTR TCA 90 bp | CCCATCCCTTCCTTTCTGATCCATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGCTTCTCGACCTCATTaGGCCTGGTCTCTATGTCAT | + |
Preference number: 4 (lower is better) Translates to: PIPSFLIHPGTCAIEVSRASRPH*AWSLCH Trigger: ATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGC...CCTGCTGACCTCAATGGCACAAGTGCCAGGATGGATCAGAAAGGAAGGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR CCA 90 bp | CATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTAGAACAACCTCAGACCTaGAATACTTACACGGCATGC | + |
Preference number: 4 (lower is better) Translates to: HPGTCAIEVSRGRTSSTLEQPQT*NTYTAC Trigger: GCATGCCGTGTAAGTATTCCAGGTCTGAGGTTGTTC...TAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR TCA 90 bp | CCCTTGGAGGAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGTATGCTGTGGTCAATaGCTATGGTCTCTGTGTTTG | + |
Preference number: 4 (lower is better) Translates to: PLEEHSRQHEDMQSRLEAVCCGQ*LWSLCL Trigger: CAAACACAGAGACCATAGTCATTGACCACAGCATAC...TGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTCCTCCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053459.15 |
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CDS-3UTR TCA 90 bp | TCACCACCATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGAGCTGGTCCGCTTCTCGACCTCATTaGGCCTGGTCTCTATGTCAT | + |
Preference number: 4 (lower is better) Translates to: SPPFSNKCSVESASRSWSASRPH*AWSLCH Trigger: ATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGC...GGACCAGCTCCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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CDS-3UTR TCA 90 bp | GAGGTGAACTCACCACCATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGGCTTCTCGACCTCATTaGGCCTGGTCTCTATGTCAT | + |
Preference number: 4 (lower is better) Translates to: EVNSPPFSNKCSVESASRASRPH*AWSLCH Trigger: ATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGC...CCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000125037.3 |
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CDS-3UTR TCA 90 bp | GAGGTGAACTCACCACCATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGATGCTTTCCTGGGGCTaGAGATACGCTCAGCAGTTA | + |
Preference number: 4 (lower is better) Translates to: EVNSPPFSNKCSVESASRMLSWG*RYAQQL Trigger: TAACTGCTGAGCGTATCTTCAGCCCCAGGAAAGCAT...CCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATGGTGGTGAGTTCACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR TCA 90 bp | CCTAGGAGGTCCAGGCTGAGCAGTAGCTTTGGCCCTTGGAGGAGCACAGTAGACGGACCTCATGATTTCTaGTATTTTAACAGGACTTTG | + |
Preference number: 4 (lower is better) Translates to: PRRSRLSSSFGPWRSTVDGPHDF*YFNRTL Trigger: CAAAGTCCTGTTAAAATATCAGAAATCATGAGGTCC...GTCTACTGTGCTCCTCCAAGGGCCAAAGCTACTGCTCAGCCTGGACCTCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053459.15 |
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CDS-3UTR TCA 90 bp | ATCCTTCTTAGGGAGGTCCTGAATCACTTAATATCCCCCGTCCACGAGGTCCAGAATAGGACAAGTTGGTaGCATAAGCCTCTGGGTCGT | + |
Preference number: 4 (lower is better) Translates to: ILLREVLNHLISPVHEVQNRTSW*HKPLGR Trigger: ACGACCCAGAGGCTTATGTCACCAACTTGTCCTATT...CTGGACCTCGTGGACGGGGGATATTAAGTGATTCAGGACCTCCCTAAGAAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053459.15 |
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CDS-3UTR GCA 90 bp | ACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTAGGCAGTGGTATGATTTCTCAGAAATaGTTTCCTGGGGCTGAAGAT | + |
Preference number: 4 (lower is better) Translates to: TCAIEVSRGRTSSTLGSGMISQK*FPGAED Trigger: ATCTTCAGCCCCAGGAAAGCATTTCTGAGAAATCAT...ACCACTGCCTAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR TCA 90 bp | GTGTGTGCCTTTGACACACAAGAGAAAAGTGGGGAGTCAGGGCCATGTGACCAAATCTTTCAAAGAAGGTaGGAACAACCTCAGACCTGG | + |
Preference number: 4 (lower is better) Translates to: VCAFDTQEKSGESGPCDQIFQRR*EQPQTW Trigger: CCAGGTCTGAGGTTGTTCTCACCTTCTTTGAAAGAT...TTGGTCACATGGCCCTGACTCCCCACTTTTCTCTTGTGTGTCAAAGGCACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR GCA 90 bp | CACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGCCCGATATGGTCTCTGTGTTTaGCAAACAAAATCCATTGGA | + |
Preference number: 4 (lower is better) Translates to: HSRQHEDMQSRLEAEKARYGLCV*QTKSIG Trigger: TCCAATGGATTTTGTTTGGCAAACACAGAGACCATA...TCGGGCCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR CCA 90 bp | ACGCTCCTTCCGGCTCATCCCAAACCCAGATTCCAGGGAGCAGATGTAAAGAAACAGGACTTTGAAAGCTaGGTTGGATCTTATGGACAT | + |
Preference number: 4 (lower is better) Translates to: TLLPAHPKPRFQGADVKKQDFES*VGSYGH Trigger: ATGTCCATAAGATCCAACCCAGCTTTCAAAGTCCTG...TTTCTTTACATCTGCTCCCTGGAATCTGGGTTTGGGATGAGCCGGAAGGAGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR CCA 90 bp | CAGACCTTCTGTGGTCTAAGCTGTAAGCATCCCTTCCTTCCTTCCCATCCCTTCCAGGACTTTGAAAGCTaGGTTGGATCTTATGGACAT | + |
Preference number: 4 (lower is better) Translates to: QTFCGLSCKHPFLPSHPFQDFES*VGSYGH Trigger: ATGTCCATAAGATCCAACCCAGCTTTCAAAGTCCTG...GAAGGGATGGGAAGGAAGGAAGGGATGCTTACAGCTTAGACCACAGAAGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR TCA 90 bp | GTGTGTGCCTTTGACACACAAGAGAAAAGTGGGGAGTCAGGGCCATGTGACCAAGCCTTCTTTAGCCTCTaGTATTTTAACAGGACTTTG | + |
Preference number: 4 (lower is better) Translates to: VCAFDTQEKSGESGPCDQAFFSL*YFNRTL Trigger: CAAAGTCCTGTTAAAATATCAGAGGCTAAAGAAGGC...TTGGTCACATGGCCCTGACTCCCCACTTTTCTCTTGTGTGTCAAAGGCACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR TCA 90 bp | CAATCTTCTCCAGGCTTGATGTTGTGTAAACGCTCCTTCCGGCTCATCCCAAACGCAGTTAAGAATACTTaGTGTTCTTCCAGAAGACCC | + |
Preference number: 4 (lower is better) Translates to: QSSPGLMLCKRSFRLIPNAVKNT*CSSRRP Trigger: GGGTCTTCTGGAAGAACATCAAGTATTCTTAACTGC...GTTTGGGATGAGCCGGAAGGAGCGTTTACACAACATCAAGCCTGGAGAAGATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR GCA 90 bp | CATTCTCAAACAAATGCTCTGTGGAATCCGCATCCAGGAGCTGGTCCTTCCCGTTATGGTCTCTGTGTTTaGCAAACAAAATCCATTGGA | + |
Preference number: 4 (lower is better) Translates to: HSQTNALWNPHPGAGPSRYGLCV*QTKSIG Trigger: TCCAATGGATTTTGTTTGGCAAACACAGAGACCATA...ACGGGAAGGACCAGCTCCTGGATGCGGATTCCACAGAGCATTTGTTTGAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR CCA 90 bp | CTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCACAGGACCATGAATGCTGAACAACCTCAGACCTaGAATACTTACACGGCATGC | + |
Preference number: 4 (lower is better) Translates to: LPWKKTLYQVHMHRTMNAEQPQT*NTYTAC Trigger: GCATGCCGTGTAAGTATTCCAGGTCTGAGGTTGTTC...AGCATTCATGGTCCTGTGCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR TCA 90 bp | AGTGAGGAGGACGCTCTCTTCCCTGGAAGAAAACTTTATATCAGGTTCATATGCATCCATTGGACCTCATaGTTTCTCAGAAATGCTTTC | + |
Preference number: 4 (lower is better) Translates to: SEEDALFPGRKLYIRFICIHWTS*FLRNAF Trigger: GAAAGCATTTCTGAGAAATCATGAGGTCCAATGGAT...GCATATGAACCTGATATAAAGTTTTCTTCCAGGGAAGAGAGCGTCCTCCTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS GCA 90 bp | GCGCCAGCTCAGACCGGTCCTCGGGGAAGGCATCGCGGAGGCGCTTaGACAGGCGGCCCAGGTCGGCGAAGCTGCGGTGCAGGTAGAGCA | + |
Preference number: 5 (lower is better) Translates to: APAQTGPRGRHRGGA*TGGPGRRSCGAGRA Trigger: TGCTCTACCTGCACCGCAGCTTCGCCGACCTGGGCCGCCTGTGCAAGCGCCTCCGCGATGCCTTCCCCGAGGACCGGTCTGAGCTGGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 90 bp | AGCCTGGTCTCTATGTCATGTGCACCCTTGATGGCGAGCAGTCCTTaGCGCAGCGGCGTGCGCGCCAGCTCAGACCGGTCCTCGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: SLVSMSCAPLMASSP*RSGVRASSDRSSGK Trigger: CTTCCCCGAGGACCGGTCTGAGCTGGCGCGCACGCCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 90 bp | ACAGGCGGCCCAGGTCGGCGAAGCTGCGGTGCAGGTAGAGCACGCTaGGGTCCGACCACTCGGTGCGGATTTCGAAGAACTCCTCCTCAT | + |
Preference number: 5 (lower is better) Translates to: TGGPGRRSCGAGRAR*GPTTRCGFRRTPPH Trigger: ATGAGGAGGAGTTCTTCGAAATCCGCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGGGCCGCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 90 bp | CTCCAGCAGCTTCTCGACCTCATTGAGCCTGGTCTCTATGTCATGTaGACCCTTGATGGCGAGCAGTCCTTGCCGCAGCGGCGTGCGCGC | + |
Preference number: 5 (lower is better) Translates to: LQQLLDLIEPGLYVM*TLDGEQSLPQRRAR Trigger: GCGCGCACGCCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGCTGCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS-3UTR CAA 90 bp | AGGAGCACAGTAGACAGCATGAGGACATGCAGTCGAGGTTGGAGGCAGAGAAGGGCCAAACAAAATCCATaGGACCTCATGATTTCTCAG | + |
Preference number: 5 (lower is better) Translates to: RSTVDSMRTCSRGWRQRRAKQNP*DLMISQ Trigger: CTGAGAAATCATGAGGTCCAATGGATTTTGTTTGGC...CCTTCTCTGCCTCCAACCTCGACTGCATGTCCTCATGCTGTCTACTGTGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS-3UTR CAA 90 bp | CATCCTGGCACTTGTGCCATTGAGGTCAGCAGGGGAAGGACTTCGAGCACCCTATATTTTAACAGGACTTaGAAAGCTGGGTTGGATCTT | + |
Preference number: 5 (lower is better) Translates to: HPGTCAIEVSRGRTSSTLYFNRT*KAGLDL Trigger: AAGATCCAACCCAGCTTTCAAAGTCCTGTTAAAATA...TAGGGTGCTCGAAGTCCTTCCCCTGCTGACCTCAATGGCACAAGTGCCAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR CAA 90 bp | ATCCTTCTTAGGGAGGTCCTGAATCACTTAATATCCCCCGTCCACGAGGTCCAGCTATGGTCTCTGTGTTaGCCAAACAAAATCCATTGG | + |
Preference number: 5 (lower is better) Translates to: ILLREVLNHLISPVHEVQLWSLC*PNKIHW Trigger: CCAATGGATTTTGTTTGGCAAACACAGAGACCATAG...CTGGACCTCGTGGACGGGGGATATTAAGTGATTCAGGACCTCCCTAAGAAGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS-3UTR CAA 90 bp | CAATCTTCTCCAGGCTTGATGTTGTGTAAACGCTCCTTCCGGCTCATCCCAAACCTATGGTCTCTGTGTTaGCCAAACAAAATCCATTGG | + |
Preference number: 5 (lower is better) Translates to: QSSPGLMLCKRSFRLIPNLWSLC*PNKIHW Trigger: CCAATGGATTTTGTTTGGCAAACACAGAGACCATAG...GTTTGGGATGAGCCGGAAGGAGCGTTTACACAACATCAAGCCTGGAGAAGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS TCA 90 bp | GTCTACCACTCCAGTTCTGAGAGCTCCAGTGCCTTCTTTAGCCTCTaGTATTTTAACAGGACTTTGAAAGCTGGGTTGGATCTTATGGAC | + |
Preference number: 5 (lower is better) Translates to: VYHSSSESSSAFFSL*YFNRTLKAGLDLMD Trigger: GTCCATAAGATCCAACCCAGCTTTCAAAGTCCTGTTAAAATATCAGAGGCTAAAGAAGGCACTGGAGCTCTCAGAACTGGAGTGGTAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS TCA 90 bp | AAATCCATTGGACCTCATGATTTCTCAGAAATGCTTTCCTGGGGCTaGAGATACGCTCAGCAGTTAAGAATACTTGATGTTCTTCCAGAA | + |
Preference number: 5 (lower is better) Translates to: KSIGPHDFSEMLSWG*RYAQQLRILDVLPE Trigger: TTCTGGAAGAACATCAAGTATTCTTAACTGCTGAGCGTATCTTCAGCCCCAGGAAAGCATTTCTGAGAAATCATGAGGTCCAATGGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS GCA 72 bp | CAGACCGGTCCTCGGGGAAGGCATCGCGGAGGCGCTTaGACAGGCGGCCCAGGTCGGCGAAGCTGCGGTGCA | + |
Preference number: 6 (lower is better) Translates to: QTGPRGRHRGGA*TGGPGRRSCGA Trigger: TGCACCGCAGCTTCGCCGACCTGGGCCGCCTGTGCAAGCGCCTCCGCGATGCCTTCCCCGAGGACCGGTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 72 bp | GGAGGCGCTTGCACAGGCGGCCCAGGTCGGCGAAGCTaGGGTGCAGGTAGAGCACGCTGCGGTCCGACCACT | + |
Preference number: 6 (lower is better) Translates to: GGACTGGPGRRS*GAGRARCGPTT Trigger: AGTGGTCGGACCGCAGCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGGGCCGCCTGTGCAAGCGCCTCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS CAA 90 bp | GAGCCTGGTCTCTATGTCATGTGCACCCTTGATGGCGAGCAGTCCTaGCCGCAGCGGCGTGCGCGCCAGCTCAGACCGGTCCTCGGGGAA | + |
Preference number: 6 (lower is better) Translates to: EPGLYVMCTLDGEQS*PQRRARQLRPVLGE Trigger: TTCCCCGAGGACCGGTCTGAGCTGGCGCGCACGCCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 72 bp | GGTGCAGGTAGAGCACGCTGCGGTCCGACCACTCGGTaGGGATTTCGAAGAACTCCTCCTCATCGCCGCGCC | + |
Preference number: 6 (lower is better) Translates to: GAGRARCGPTTR*GFRRTPPHRRA Trigger: GGCGCGGCGATGAGGAGGAGTTCTTCGAAATCCGCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 72 bp | CCAGGTCGGCGAAGCTGCGGTGCAGGTAGAGCACGCTaGGGTCCGACCACTCGGTGCGGATTTCGAAGAACT | + |
Preference number: 6 (lower is better) Translates to: PGRRSCGAGRAR*GPTTRCGFRRT Trigger: AGTTCTTCGAAATCCGCACCGAGTGGTCGGACCGCAGCGTGCTCTACCTGCACCGCAGCTTCGCCGACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS CAA 90 bp | AGCTTCTCGACCTCATTGAGCCTGGTCTCTATGTCATGTGCACCCTaGATGGCGAGCAGTCCTTGCCGCAGCGGCGTGCGCGCCAGCTCA | + |
Preference number: 6 (lower is better) Translates to: SFSTSLSLVSMSCAP*MASSPCRSGVRASS Trigger: TGAGCTGGCGCGCACGCCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS CAA 72 bp | ACCTCATTGAGCCTGGTCTCTATGTCATGTGCACCCTaGATGGCGAGCAGTCCTTGCCGCAGCGGCGTGCGC | + |
Preference number: 6 (lower is better) Translates to: TSLSLVSMSCAP*MASSPCRSGVR Trigger: GCGCACGCCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS GCA 72 bp | CTTCTCGACCTCATTGAGCCTGGTCTCTATGTCATGTaGACCCTTGATGGCGAGCAGTCCTTGCCGCAGCGG | + |
Preference number: 6 (lower is better) Translates to: LLDLIEPGLYVM*TLDGEQSLPQR Trigger: CCGCTGCGGCAAGGACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS CAA 90 bp | TTACACGGCATGCTGATGACCGTCTCCAGCAGCTTCTCGACCTCATaGAGCCTGGTCTCTATGTCATGTGCACCCTTGATGGCGAGCAGT | + |
Preference number: 6 (lower is better) Translates to: LHGMLMTVSSSFSTS*SLVSMSCAPLMASS Trigger: ACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGCTGCTGGAGACGGTCATCAGCATGCCGTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS CAA 90 bp | AATAACGGCATGCTGATGACCGTCTCCAGCAGCTTCTCGACCTCATaGAGCCTGGTCTCTATGTCATGTGCACCCTTGATGGCGAGCAGT | + |
Preference number: 6 (lower is better) Translates to: NNGMLMTVSSSFSTS*SLVSMSCAPLMASS Trigger: ACTGCTCGCCATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGCTGCTGGAGACGGTCATCAGCATGCCGTTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125037.3 |
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CDS CAA 72 bp | ATGCTGATGACCGTCTCCAGCAGCTTCTCGACCTCATaGAGCCTGGTCTCTATGTCATGTGCACCCTTGATG | + |
Preference number: 6 (lower is better) Translates to: MLMTVSSSFSTS*SLVSMSCAPLM Trigger: CATCAAGGGTGCACATGACATAGAGACCAGGCTCAATGAGGTCGAGAAGCTGCTGGAGACGGTCATCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 ENSMUST00000125037.3 |
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CDS TCA 72 bp | CTGGGGCTGAAGATACGCTCAGCAGTTAAGAATACTTaGTGTTCTTCCAGAAGACCCACACTCAGTTCCCAG | + |
Preference number: 6 (lower is better) Translates to: LGLKIRSAVKNT*CSSRRPTLSSQ Trigger: CTGGGAACTGAGTGTGGGTCTTCTGGAAGAACATCAAGTATTCTTAACTGCTGAGCGTATCTTCAGCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS TCA 72 bp | TTAACACCTGATCCAAAGGCGATCTTTCAAAGAAGGTaGGAACAACCTCAGACCTGGAATACTTACACGGCA | + |
Preference number: 6 (lower is better) Translates to: LTPDPKAIFQRR*EQPQTWNTYTA Trigger: TGCCGTGTAAGTATTCCAGGTCTGAGGTTGTTCTCACCTTCTTTGAAAGATCGCCTTTGGATCAGGTGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021847.15 ENSMUST00000053459.15 |
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CDS TCA 72 bp | GGACCTCATGATTTCTCAGAAATGCTTTCCTGGGGCTaGAGATACGCTCAGCAGTTAAGAATACTTGATGTT | + |
Preference number: 6 (lower is better) Translates to: GPHDFSEMLSWG*RYAQQLRILDV Trigger: AACATCAAGTATTCTTAACTGCTGAGCGTATCTTCAGCCCCAGGAAAGCATTTCTGAGAAATCATGAGGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |
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CDS TCA 72 bp | GTGCCTTCTTTAGCCTCTGATATTTTAACAGGACTTTaGAAGCTGGGTTGGATCTTATGGACATTATCATTT | + |
Preference number: 6 (lower is better) Translates to: VPSLASDILTGL*KLGWILWTLSF Trigger: AAATGATAATGTCCATAAGATCCAACCCAGCTTTCAAAGTCCTGTTAAAATATCAGAGGCTAAAGAAGGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021847.15 |