Pregenerated sensors for PWWP4D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079531Ensembl transcript IDs: ENSMUST00000114116.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCATGTGCAGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGTCGCTaGCACAGGCTCAGGGGCAGAAGCTGGCGCAGGCGCAGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CMCRCRRRRRCRCSR*HRLRGRSWRRRRHR Trigger: CCTGTGCCTGCGCCTGCGCCAGCTTCTGCCCCTGAGCCTGTGCCAGCGACTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | TGGCCTTTCTGGTTGCGCCCCTGGAGGCACAGGTGCATGTGCAGGTaGAGACGCAGGCGCAGGTGTAGGTGCAGTCGCTGGCACAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPFWLRPWRHRCMCR*RRRRRCRCSRWHRL Trigger: GAGCCTGTGCCAGCGACTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | AGCCCTTGGCCTTTCTGGTTGCGCCCCTGGAGGCACAGGTGCATGTaGAGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGTCGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPWPFWLRPWRHRCM*RCRRRRRCRCSRWH Trigger: GTGCCAGCGACTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | TGGGAGAGCCCTTGGCCTTTCTGGTTGCGCCCCTGGAGGCACAGGTaGATGTGCAGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: WESPWPFWLRPWRHR*MCRCRRRRRCRCSR Trigger: GCGACTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | GCAGTGTGGGCCTGGGCTTTCCCCACAGGCACTGCAGGCACATTCTaGGAGCCCATCATCACAGGACCTGGATCCGGGCGGACCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVWAWAFPTGTAGTF*EPIITGPGSGRTRF Trigger: GAAGCGGGTCCGCCCGGATCCAGGTCCTGTGATGATGGGCTCGCAGAATGTGCCTGCAGTGCCTGTGGGGAAAGCCCAGGCCCACACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | GCTGGCGCAGGCGCAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGAGAGTGADLGWSC*SWPALLEPLEPRCW Trigger: CCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCCTGCGCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | GGGGCAGAAGCTGGCGCAGGCGCAGGCACAGGCGCTGACCTAGGCTaGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAEAGAGAGTGADLG*SCWSWPALLEPLEP Trigger: TGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCCTGCGCCAGCTTCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | GAAGCTGGCGCAGGCGCAGGCACAGGCGCTGACCTAGGCTGGAGCTaGTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGAGAGTGADLGWS*WSWPALLEPLEPRC Trigger: GCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCCTGCGCCAGCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | GCAGGCGCAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTGGAGCTaGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGCTGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGAGTGADLGWSCWS*PALLEPLEPRCWFF Trigger: GAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | AACACATCCCCTTCCATTTCAGAGCGCGGGAGGCCTACAGCAGTGTaGGCCTGGGCTTTCCCCACAGGCACTGCAGGCACATTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTSPSISERGRPTAV*AWAFPTGTAGTFCE Trigger: CTCGCAGAATGTGCCTGCAGTGCCTGTGGGGAAAGCCCAGGCCCACACTGCTGTAGGCCTCCCGCGCTCTGAAATGGAAGGGGATGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | GCACACCGAACTCGTTGTTTGAGGGCTTTGGGTGAGATAGAGATGTaGCTCGGTGGCCCAGAGGCAGCCTGCTGCTCGGTTTTAAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHRTRCLRALGEIEM*LGGPEAACCSVLNR Trigger: CCGATTTAAAACCGAGCAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCTATCTCACCCAAAGCCCTCAAACAACGAGTTCGGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | ACCTTGGAGCTCCTCACTCTCCTCTTCTCACCCACAGGCAGTATTTaGACCTCCAGGAAGGGCACCCCTCTCCTTTTACTATGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLELLTLLFSPTGSI*TSRKGTPLLLLWAG Trigger: CCCAGCCCATAGTAAAAGGAGAGGGGTGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGTGAGAAGAGGAGAGTGAGGAGCTCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | GGCAGCCTGCTGCTCGGTTTTAAATCGGGTACCCTTTCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTTCTCTTCCCTGTGCCTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLLGFKSGTLSGG*GTQRPELSLPCAWL Trigger: AAGCCAGGCACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGAAAGGGTACCCGATTTAAAACCGAGCAGCAGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 90 bp | CAGCTTTTCCCAAGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTaGTGCCTCTTAACACATCCCCTTCCATTTCAGAGCGCGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLFPRVSSLSNLATL*CLLTHPLPFQSAGG Trigger: GCCTCCCGCGCTCTGAAATGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGGGAAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 90 bp | CTTTTCCCAAGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTGGTaGCTCTTAACACATCCCCTTCCATTTCAGAGCGCGGGAGGCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFPRVSSLSNLATLW*LLTHPLPFQSAGGL Trigger: TAGGCCTCCCGCGCTCTGAAATGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | AGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGTCGCTaGCACAGGCTCAGGGGCAGAAGCTGGCGCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RCRRRRRCRCSR*HRLRGRSWRRR Trigger: GCGCCTGCGCCAGCTTCTGCCCCTGAGCCTGTGCCAGCGACTGCACCTACACCTGCGCCTGCGTCTGCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | GCTGGCGCAGGCGCAGGCACAGGCGCTGACCTAGGCTaGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGAGAGTGADLG*SCWSWPALLEP Trigger: AGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCCTGCGCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 72 bp | GCCTGGGCTTTCCCCACAGGCACTGCAGGCACATTCTaGGAGCCCATCATCACAGGACCTGGATCCGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AWAFPTGTAGTF*EPIITGPGSGR Trigger: CCGCCCGGATCCAGGTCCTGTGATGATGGGCTCGCAGAATGTGCCTGCAGTGCCTGTGGGGAAAGCCCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | CCAGGACTCCTCTGGGAGAGCCCTTGGCCTTTCTGGTaGCGCCCCTGGAGGCACAGGTGCATGTGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGLLWESPWPFW*RPWRHRCMCRC Trigger: GCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | GGCGCAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGTGADLGWSC*SWPALLEPLEP Trigger: TGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | ATTTCAGAGCGCGGGAGGCCTACAGCAGTGTGGGCCTaGGCTTTCCCCACAGGCACTGCAGGCACATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISERGRPTAVWA*AFPTGTAGTFC Trigger: GCAGAATGTGCCTGCAGTGCCTGTGGGGAAAGCCCAGGCCCACACTGCTGTAGGCCTCCCGCGCTCTGAAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | CTCCAGGAAGGGCACCCCTCTCCTTTTACTATGGGCTaGGGTCCTGGGTCTGGACAACACCCTTGCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LQEGHPSPFTMG*GPGSGQHPCRT Trigger: TGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAAAGGAGAGGGGTGCCCTTCCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | CCTCTTGCCAGCGAGAGCAGGGCCTCGTCTGCTTCCTaGGCCACTTCTTGCAAATGTCTGGCCACGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PLASESRASSAS*ATSCKCLATRC Trigger: GCATCTCGTGGCCAGACATTTGCAAGAAGTGGCCAAGGAAGCAGACGAGGCCCTGCTCTCGCTGGCAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | GACCTAGGCTGGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTaGGAGCCAAGGTGCTGGTTCTTCGGCTACCTGCTCTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLGWSCWSWPALLEP*EPRCWFFGYLLFLL Trigger: AAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | TACTATGGGCTGGGGTCCTGGGTCTGGACAACACCCTaGCAGGACACAGCTGGCTCTTCCAGCCACAGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: YYGLGSWVWTTP*QDTAGSSSHRV Trigger: TACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | TGGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTaGGAGCCAAGGTGCTGGTTCTTCGGCTACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSCWSWPALLEP*EPRCWFFGYLL Trigger: GAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | CACCTTGGAGCTCCTCACTCTCCTCTTCTCACCCACAGGCAGTATTaGGACCTCCAGGAAGGGCACCCCTCTCCTTTTACTATGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLGAPHSPLLTHRQY*DLQEGHPSPFTMGW Trigger: CCAGCCCATAGTAAAAGGAGAGGGGTGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGTGAGAAGAGGAGAGTGAGGAGCTCCAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | CTTTGGAGCCAAGGTGCTGGTTCTTCGGCTACCTGCTCTTCCTCCTaGAAAGAAGCTGCTTCCCTCACCCAGACCATCCAGGGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWSQGAGSSATCSSS*KEAASLTQTIQGHL Trigger: AAGGTGGCCCTGGATGGTCTGGGTGAGGGAAGCAGCTTCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS TCA 72 bp | GGGTACCCTTTCTGGAGGCTGGGGCACTCAAAGACCTaGGCTTTCTCTTCCCTGTGCCTGGCTTTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GYPFWRLGHSKT*AFSSLCLAFSS Trigger: GGAAGAGAAAGCCAGGCACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGAAAGGGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 72 bp | GAGATAGAGATGTGCCTCGGTGGCCCAGAGGCAGCCTaGTGCTCGGTTTTAAATCGGGTACCCTTTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EIEMCLGGPEAA*CSVLNRVPFLE Trigger: CTCCAGAAAGGGTACCCGATTTAAAACCGAGCAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCTATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 72 bp | GAGGGACACGGATACCCCTGCGCTCAAACTGCATGTTaGCCTCGATCAACAGCACCCTCGCCATCTTATCGA | + |
|
Preference number: 6 (lower is better) Translates to: EGHGYPCAQTAC*PRSTAPSPSYR Trigger: TCGATAAGATGGCGAGGGTGCTGTTGATCGAGGGCAACATGCAGTTTGAGCGCAGGGGTATCCGTGTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | AGAGGGACACGGATACCCCTGCGCTCAAACTGCATGTaGCCCTCGATCAACAGCACCCTCGCCATCTTATCG | + |
|
Preference number: 6 (lower is better) Translates to: RGTRIPLRSNCM*PSINSTLAILS Trigger: CGATAAGATGGCGAGGGTGCTGTTGATCGAGGGCAACATGCAGTTTGAGCGCAGGGGTATCCGTGTCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | TCTAAGCCAGCACACCGAACTCGTTGTTTGAGGGCTTaGGGTGAGATAGAGATGTGCCTCGGTGGCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SKPAHRTRCLRA*GEIEMCLGGPE Trigger: CTCTGGGCCACCGAGGCACATCTCTATCTCACCCAAAGCCCTCAAACAACGAGTTCGGTGTGCTGGCTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | CTCTCCTTTTACTATGGGCTGGGGTCCTGGGTCTGGACAACACCCTaGCAGGACACAGCTGGCTCTTCCAGCCACAGAGTACATATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSFYYGLGSWVWTTP*QDTAGSSSHRVHIL Trigger: CAGAATATGTACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAAAGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | CTGCTCGGTTTTAAATCGGGTACCCTTTCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTTCTCTTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGFKSGTLSGG*GTQRPELSLPC Trigger: ACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGAAAGGGTACCCGATTTAAAACCGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | AAGGAGTTGATGCTTATGATTTCAGACTTGGCTAGGGGCCTCACCTaGGAGCTCCTCACTCTCCTCTTCTCACCCACAGGCAGTATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KELMLMISDLARGLT*ELLTLLFSPTGSIW Trigger: CCAAATACTGCCTGTGGGTGAGAAGAGGAGAGTGAGGAGCTCCAAGGTGAGGCCCCTAGCCAAGTCTGAAATCATAAGCATCAACTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS GCA 72 bp | AGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTGGTaGCTCTTAACACATCCCCTTCCATTTCAGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVSSLSNLATLW*LLTHPLPFQSA Trigger: CGCGCTCTGAAATGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | TTTCCTGCCAAGGAGTTGATGCTTATGATTTCAGACTaGGCTAGGGGCCTCACCTTGGAGCTCCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPAKELMLMISD*ARGLTLELLTL Trigger: GAGAGTGAGGAGCTCCAAGGTGAGGCCCCTAGCCAAGTCTGAAATCATAAGCATCAACTCCTTGGCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 90 bp | CTGGATTACCGCCAGCTTTTCCCAAGGGTGTCTTCTTTGAGTAACTaGGCCACACTCTGGTGCCTCTTAACACATCCCCTTCCATTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LDYRQLFPRVSSLSN*ATLWCLLTHPLPFQ Trigger: CTGAAATGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGGGAAAAGCTGGCGGTAATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CCA 72 bp | CCAAGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTaGTGCCTCTTAACACATCCCCTTCCATTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRVSSLSNLATL*CLLTHPLPFQS Trigger: GCTCTGAAATGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||
| CDS CAA 72 bp | CTGGATTACCGCCAGCTTTTCCCAAGGGTGTCTTCTTaGAGTAACTTGGCCACACTCTGGTGCCTCTTAACA | + |
|
Preference number: 6 (lower is better) Translates to: LDYRQLFPRVSS*SNLATLWCLLT Trigger: TGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGGGAAAAGCTGGCGGTAATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114116.2 |
||