Pregenerated sensors for PWWP4C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079534Ensembl transcript IDs: ENSMUST00000114119.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCCATTCCTGTCTCCTGTCTaGGGAGCCTCAGGGGTGACA | + |
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Preference number: 3 (lower is better) Translates to: GVKKHLVRSFDSSHCVPPFLSPV*GASGVT Trigger: TGTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAA...TGGGGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR GCA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGAGAGCGCGGGAGGCCTaGAGCAGTGTGGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLRAREA*SSVGLG Trigger: GCCCAGGCCCACACTGCTGCAGGCCTCCCGCGCTCT...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACAGCTGAAAGGAGGACGGGCGCTGGCCTAGGCTaGAGCTGCTGGAGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HFLSPVLGASGVTAERRTGAGLG*SCWSWP Trigger: AGGCCAGCTCCAGCAGCTCCAGCCTAGGCCAGCGCC...CGTCCTCCTTTCAGCTGTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACCGCAGGCGCAGGCGCTaGCCTAGGCTGGAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDRRRRR*PRLELL Trigger: CAGCAGCTCCAGCCTAGGCCAGCGCCTGCGCCTGCG...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACGCAGCAGTGTGGGCCTaGGCTTCCCCCACAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDAAVWA*ASPTGT Trigger: AGTGCCTGTGGGGGAAGCCCAGGCCCACACTGCTGC...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGAGGCCTGCAGCAGTGTaGGCCTGGGCTTCCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLRPAAV*AWASPT Trigger: TGTGGGGGAAGCCCAGGCCCACACTGCTGCAGGCCT...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACAGAGATGTGCCTCGGTaGCCCAGAGGCAGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDRDVPR*PRGSLL Trigger: CAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCT...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACCTGGGGTCCTGGGTCTaGACAACACCCTTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDLGSWV*TTPLQD Trigger: GTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAG...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGATGTAGGTGCAGGCGCTaGCACAGGCTCAGGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HGLPDVPVWRHFLSPVLGCRCRR*HRLRGR Trigger: TCTGCCCCTGAGCCTGTGCCAGCGCCTGCACCTACA...TCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGCGTTCCTTGCTCAATaGTGCTGGGCTCCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTVSQMFQFGGTSCLLSWAFLAQ*CWAPGQ Trigger: CTGCCCAGGAGCCCAGCACCATTGAGCAAGGAACGC...CCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGTGGCAGCCCGAATCCTaGCTGCTGACCTCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLWQPES*LLTSSW Trigger: CCAGGAAGAGGTCAGCAGCCAGGATTCGGGCTGCCA...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GTGCCCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTTGGAGCTGCTGGAGCTaGCCTGCTCTTTTGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: VPPRSPRCSSLEALPVSCWSCWS*PALLEP Trigger: AGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCA...ACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGGGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: PTVSQMFQFGGTSCLLSWLGWSC*SWPALL Trigger: CAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAG...CCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGATCGGGTACCCTTCCTaGAGGCTGGGGCACTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLIGYPS*RLGHSK Trigger: CTTTGAGTGCCCCAGCCTCCAGGAAGGGTACCCGAT...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACTTGGAGCCAAGGTGCTaGTTCTTCGGCTACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDLEPRC*FFGYLL Trigger: GAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAA...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GTGCCCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTGGGCGTACAGTCTGCTaGCTCTCCTCACAAGTGATA | + |
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Preference number: 4 (lower is better) Translates to: VPPRSPRCSSLEALPVSCGRTVC*LSSQVI Trigger: TATCACTTGTGAGGAGAGCCAGCAGACTGTACGCCC...ACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| 3UTR CAA 72 bp | GATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTaGGGAGCCTCAGGGGTGACAGCTGAAAGGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: DVPVWRHFLSPV*GASGVTAERRT Trigger: CGTCCTCCTTTCAGCTGTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGACCTCTTACTATGGGCTaGGGTCCTGGGTCTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: HGLPDVPVWRHFLSPVLGPLTMG*GPGSGQ Trigger: TTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGG...TCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACACCTTTGAGTGCACTTaGGGTTCCCATTCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGSLRGDTFECT*GSHSGS Trigger: GCTCCCAGAATGGGAACCCCAAGTGCACTCAAAGGT...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCTGGCCTGCTCTTTTaGAACCTTTGGAGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: HGLPDVPVWRHFLSPVLGAGLLF*NLWSQG Trigger: ACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGC...TCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCTTCCCAGGACTCCTCTaGGAGAGCCCTTGGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EGVKKHLVRSFDSSHCVPFPGLL*ESPWPF Trigger: GAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTGGGAA...GGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGCCACATTGGTGGCTTTaGCATCTTTCTGAACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLPHWWL*HLSELG Trigger: CCCGAGTTCAGAAAGATGCCAAAGCCACCAATGTGG...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCTTGCAGGACACAGCTaGCTCTTCCAGCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: EGVKKHLVRSFDSSHCVPLAGHS*LFQPQS Trigger: ACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAG...GGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCCAATGGTGCTGGGCTCCTaGGCAGAAACCACATTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GVKKHLVRSFDSSHCVPPMVLGS*AETTLV Trigger: CACCAATGTGGTTTCTGCCCAGGAGCCCAGCACCAT...TGGGGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | CACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGACCTCGTCTGCTTCCTTaGCCACTTCTTGCAAATGTC | + |
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Preference number: 4 (lower is better) Translates to: HGLPDVPVWRHFLSPVLGPRLLP*PLLANV Trigger: GACATTTGCAAGAAGTGGCCAAGGAAGCAGACGAGG...TCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCCACTGCTGACCTCTTCCTaGCCGCCTTTAAGATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVKKHLVRSFDSSHCVPPLLTSS*PPLRWS Trigger: AGACCATCTTAAAGGCGGCCAGGAAGAGGTCAGCAG...TGGGGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCAACTTGGCCACACTCTaGTGCCTCTTAACACATCCC | + |
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Preference number: 4 (lower is better) Translates to: EGVKKHLVRSFDSSHCVPNLATL*CLLTHP Trigger: GGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTT...GGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCAGAAACCACATTGGTaGCTTTGGCATCTTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGVKKHLVRSFDSSHCVPQKPHW*LWHLSE Trigger: TTCAGAAAGATGCCAAAGCCACCAATGTGGTTTCTG...GGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | TGCATGTGCAGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGGCGCTaGCACAGGCTCAGGGGCAGAAGCTGGCGCAGGCGCAGGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: CMCRCRRRRRCRCRR*HRLRGRSWRRRRRR Trigger: CCTGCGCCTGCGCCTGCGCCAGCTTCTGCCCCTGAGCCTGTGCCAGCGCCTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | AGACCATCCAGGGCCACCTTGAGGGCTCTCCTGGATGCCCTGGTCTaGCCTGGCGAGCCCCTGCCCCGTGACTCCTTTCCTGCCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPSRATLRALLDALV*PGEPLPRDSFPAKE Trigger: CTCCTTGGCAGGAAAGGAGTCACGGGGCAGGGGCTCGCCAGGGCAGACCAGGGCATCCAGGAGAGCCCTCAAGGTGGCCCTGGATGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | TGGGAGAGCCCTTGGCCTTTCTGGTTGCGCCCCTGGAGGCACAGGTaGATGTGCAGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: WESPWPFWLRPWRHR*MCRCRRRRRCRCRR Trigger: GCGCCTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | GCAGTGTGGGCCTGGGCTTCCCCCACAGGCACTGCAGGCACATTCTaGGAGCCCATCATCACAGGACCTGGATCCGGGCGGACCCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: AVWAWASPTGTAGTF*EPIITGPGSGRTRF Trigger: GAAGCGGGTCCGCCCGGATCCAGGTCCTGTGATGATGGGCTCGCAGAATGTGCCTGCAGTGCCTGTGGGGGAAGCCCAGGCCCACACTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | CCAGGACTCCTCTGGGAGAGCCCTTGGCCTTTCTGGTTGCGCCCCTaGAGGCACAGGTGCATGTGCAGGTGCAGACGCAGGCGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PGLLWESPWPFWLRP*RHRCMCRCRRRRRC Trigger: ACACCTGCGCCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 90 bp | CTTGAAAGAAGCTGCTTCCCTCACCCAGACCATCCAGGGCCACCTTaGGGGCTCTCCTGGATGCCCTGGTCTGCCCTGGCGAGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LERSCFPHPDHPGPP*GLSWMPWSALASPC Trigger: GCAGGGGCTCGCCAGGGCAGACCAGGGCATCCAGGAGAGCCCTCAAGGTGGCCCTGGATGGTCTGGGTGAGGGAAGCAGCTTCTTTCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | GCAGGCGCAGGCGCAGGCGCTGGCCTAGGCTGGAGCTGCTGGAGCTaGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGCTGGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AGAGAGAGLGWSCWS*PALLEPLEPRCWFF Trigger: GAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGCCAGCGCCTGCGCCTGCGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | AACACATCCCCTTCCACTTCAGAGCGCGGGAGGCCTGCAGCAGTGTaGGCCTGGGCTTCCCCCACAGGCACTGCAGGCACATTCTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: NTSPSTSERGRPAAV*AWASPTGTAGTFCE Trigger: CTCGCAGAATGTGCCTGCAGTGCCTGTGGGGGAAGCCCAGGCCCACACTGCTGCAGGCCTCCCGCGCTCTGAAGTGGAAGGGGATGTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | CCTCCAGGAAGGGCACCCCTCTCCTCTTACTATGGGCTGGGGTCCTaGGTCTGGACAACACCCTTGCAGGACACAGCTGGCTCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PPGRAPLSSYYGLGS*VWTTPLQDTAGSSS Trigger: GCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCTTCCTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | TTGGGTGAGATAGAGATGTGCCTCGGTGGCCCAGAGGCAGCCTGCTaGTCGGTTTTAGATCGGGTACCCTTCCTGGAGGCTGGGGCACTC | + |
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Preference number: 5 (lower is better) Translates to: LGEIEMCLGGPEAAC*SVLDRVPFLEAGAL Trigger: GAGTGCCCCAGCCTCCAGGAAGGGTACCCGATCTAAAACCGAGCAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCTATCTCACCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | GGAAGGGCACCCCTCTCCTCTTACTATGGGCTGGGGTCCTGGGTCTaGACAACACCCTTGCAGGACACAGCTGGCTCTTCCAGCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: GRAPLSSYYGLGSWV*TTPLQDTAGSSSHR Trigger: TCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | CACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACAGCTGAAAGGAGGACGGAGGGCGGTCTTTCTTaGGGCTCCAGCTGCCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: HFLSPVLGASGVTAERRTEGGLS*GSSCPD Trigger: ATCCGGGCAGCTGGAGCCCAAAGAAAGACCGCCCTC...CGTCCTCCTTTCAGCTGTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | GGCAGTATTTGGACCTCCAGGAAGGGCACCCCTCTCCTCTTACTATaGGCTGGGGTCCTGGGTCTGGACAACACCCTTGCAGGACACAGC | + |
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Preference number: 5 (lower is better) Translates to: GSIWTSRKGTPLLLL*AGVLGLDNTLAGHS Trigger: GCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCTTCCTGGAGGTCCAAATACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACCTGCAGATGCCCGCTTaGAGTCTGGCTTCGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGSLRGDLQMPA*SLASGS Trigger: GGACCCCGAAGCCAGACTCAAAGCGGGCATCTGCAG...GTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 90 bp | CTGAACTCGGGCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTaGGTGCACTTGGGGTTCCCATTCTGGGAGCCCACACAGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: LNSGPSPLEPGVGHL*VHLGFPFWEPTQGT Trigger: TGTGCCCTGTGTGGGCTCCCAGAATGGGAACCCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | TATTTGGACCTCCAGGAAGGGCACCCCTCTCCTCTTACTATGGGCTaGGGTCCTGGGTCTGGACAACACCCTTGCAGGACACAGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: YLDLQEGHPSPLTMG*GPGSGQHPCRTQLA Trigger: AGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCTTCCTGGAGGTCCAAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | GGCAGCCTGCTGCTCGGTTTTAGATCGGGTACCCTTCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTTCTCTTCCCTGTGCCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GSLLLGFRSGTLPGG*GTQRPELSLPCAWL Trigger: AAGCCAGGCACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGAAGGGTACCCGATCTAAAACCGAGCAGCAGGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | GCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTGAGTGCACTTaGGGTTCCCATTCTGGGAGCCCACACAGGGCACACAGCACATGG | + |
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Preference number: 5 (lower is better) Translates to: APLLLNLVLVTFECT*GSHSGSPHRAHSTW Trigger: CCATGTGCTGTGTGCCCTGTGTGGGCTCCCAGAATGGGAACCCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTACCCACAGGCAGTATTaGGACCTCCAGGAAGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: VPPRSPRCSSLEALPVSCTHRQY*DLQEGH Trigger: GTGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGT...ACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | GCACACCGAACTCGTTGTTTGAGGGCTTTGGGTGAGATAGAGATGTaGCTCGGTGGCCCAGAGGCAGCCTGCTGCTCGGTTTTAGATCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHRTRCLRALGEIEM*LGGPEAACCSVLDR Trigger: CCGATCTAAAACCGAGCAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCTATCTCACCCAAAGCCCTCAAACAACGAGTTCGGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | TGCCCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCACCTGCTCTTCCTCCTaGAAAGAAGCTGCTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CPHGLPDVPVWRHFLSPVTCSSS*KEAASL Trigger: GAGGGAAGCAGCTTCTTTCAAGGAGGAAGAGCAGGT...GACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 90 bp | CTGGGCTCCTGGGCAGAAACCACATTGGTGGCTTTGGCATCTTTCTaGACTCGGGCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGSWAETTLVALASF*TRAPLLLNLVLVTF Trigger: AAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAGAAAGATGCCAAAGCCACCAATGTGGTTTCTGCCCAGGAGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | AGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTaGTGGTTCTTCGGCTACCTGCTCTTCCTCCTTGAAAGAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCWSWPALLEPLEPR*WFFGYLLFLLERSC Trigger: GCAGCTTCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | CACTTCCTGTCTCCTGTCTTGGGAGCCTCAGGGGTGACAGCTGAAAGGAGGACGCGTTGTTTGAGGGCTTaGGGTGAGATAGAGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFLSPVLGASGVTAERRTRCLRA*GEIEMC Trigger: GCACATCTCTATCTCACCCAAAGCCCTCAAACAACG...CGTCCTCCTTTCAGCTGTCACCCCTGAGGCTCCCAAGACAGGAGACAGGAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | TGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGCTaGTTCTTCGGCTACCTGCTCTTCCTCCTTGAAAGAAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CWSWPALLEPLEPRC*FFGYLLFLLERSCF Trigger: GAAGCAGCTTCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 90 bp | TGCAGAAGACTTCCCTCTTTGATTTCCAAAGATCGTCCAGCCACCTaGAGGGTTTTCTGCCCTTCACGATGTCCAGCAGGTGCTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CRRLPSLISKDRPAT*RVFCPSRCPAGAGR Trigger: CCGACCAGCACCTGCTGGACATCGTGAAGGGCAGAAAACCCTCCAGGTGGCTGGACGATCTTTGGAAATCAAAGAGGGAAGTCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGCACCGAACTCGTTGTTaGAGGGCTTTGGGTGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLHRTRC*RALGEI Trigger: TATCTCACCCAAAGCCCTCAAACAACGAGTTCGGTG...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | CCCCACGGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGCTCTTGAACCTGGTGTaGGTCACCTTTGAGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PHGLPDVPVWRHFLSPVLLLNLV*VTFECT Trigger: AGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAG...CAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 90 bp | CATTGGTGGCTTTGGCATCTTTCTGAACTCGGGCCCCTCTCCTCTTaGACCTGGTGTTGGTCACCTTTGAGTGCACTTGGGGTTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: HWWLWHLSELGPLSS*TWCWSPLSALGVPI Trigger: AATGGGAACCCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAGAAAGATGCCAAAGCCACCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 90 bp | CTCTTTTGGAACCTTTGGAGCCAAGGTGCTGGTTCTTCGGCTACCTaGTCTTCCTCCTTGAAAGAAGCTGCTTCCCTCACCCAGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LFWNLWSQGAGSSAT*SSSLKEAASLTQTI Trigger: GATGGTCTGGGTGAGGGAAGCAGCTTCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS-3UTR CAA 90 bp | GAGGGGGTAAAGAAACACTTAGTGAGGAGCTTTGACAGCAGCCATTGTGTGCCCCTTATGATTTCAGACTaGGCTAGGGGCCTCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EGVKKHLVRSFDSSHCVPLMISD*ARGLTL Trigger: CAAGGTGAGGCCCCTAGCCAAGTCTGAAATCATAAG...GGGCACACAATGGCTGCTGTCAAAGCTCCTCACTAAGTGTTTCTTTACCCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | AGGTGCAGACGCAGGCGCAGGTGTAGGTGCAGGCGCTaGCACAGGCTCAGGGGCAGAAGCTGGCGCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RCRRRRRCRCRR*HRLRGRSWRRR Trigger: GCGCCTGCGCCAGCTTCTGCCCCTGAGCCTGTGCCAGCGCCTGCACCTACACCTGCGCCTGCGTCTGCACCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CCTGGATCCGGGCGGACCCGCTTCCCAGGACTCCTCTaGGAGAGCCCTTGGCCTTTCTGGTTGCGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSGRTRFPGLL*ESPWPFWLRPW Trigger: CCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTGGGAAGCGGGTCCGCCCGGATCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | AGGGCCACCTTGAGGGCTCTCCTGGATGCCCTGGTCTaGCCTGGCGAGCCCCTGCCCCGTGACTCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RATLRALLDALV*PGEPLPRDSFP Trigger: AGGAAAGGAGTCACGGGGCAGGGGCTCGCCAGGGCAGACCAGGGCATCCAGGAGAGCCCTCAAGGTGGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | AGCTGCTTCCCTCACCCAGACCATCCAGGGCCACCTTaGGGGCTCTCCTGGATGCCCTGGTCTGCCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SCFPHPDHPGPP*GLSWMPWSALA Trigger: CGCCAGGGCAGACCAGGGCATCCAGGAGAGCCCTCAAGGTGGCCCTGGATGGTCTGGGTGAGGGAAGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | TGCATGTGCAGGTGCAGACGCAGGCGCAGGTGTAGGTaGAGGCGCTGGCACAGGCTCAGGGGCAGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CMCRCRRRRRCR*RRWHRLRGRSW Trigger: CCAGCTTCTGCCCCTGAGCCTGTGCCAGCGCCTGCACCTACACCTGCGCCTGCGTCTGCACCTGCACATGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | GGCGCAGGCGCAGGCGCTGGCCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGAGAGLGWSC*SWPALLEPLEP Trigger: TGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGCCAGCGCCTGCGCCTGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | ACTTCAGAGCGCGGGAGGCCTGCAGCAGTGTGGGCCTaGGCTTCCCCCACAGGCACTGCAGGCACATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSERGRPAAVWA*ASPTGTAGTFC Trigger: GCAGAATGTGCCTGCAGTGCCTGTGGGGGAAGCCCAGGCCCACACTGCTGCAGGCCTCCCGCGCTCTGAAGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CTCTGGGAGAGCCCTTGGCCTTTCTGGTTGCGCCCCTaGAGGCACAGGTGCATGTGCAGGTGCAGACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LWESPWPFWLRP*RHRCMCRCRRR Trigger: CCTGCGTCTGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | CAGGACTCCTCTGGGAGAGCCCTTGGCCTTTCTGGTTaGGCCCCTGGAGGCACAGGTGCATGTGCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QDSSGRALGLSG*APGGTGACAGA Trigger: TGCACCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | TGCAGCAGTGTGGGCCTGGGCTTCCCCCACAGGCACTaGAGGCACATTCTGCGAGCCCATCATCACAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: CSSVGLGFPHRH*RHILRAHHHRT Trigger: GGTCCTGTGATGATGGGCTCGCAGAATGTGCCTGCAGTGCCTGTGGGGGAAGCCCAGGCCCACACTGCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | CTTCGGGGTCCCCAAGCCAGGATGGTCCTTGTTCTCTaGGAGGGCGGTCTTTCTTTGGGCTCCAGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRGPQARMVLVL*EGGLSLGSSCP Trigger: CGGGCAGCTGGAGCCCAAAGAAAGACCGCCCTCGCAGAGAACAAGGACCATCCTGGCTTGGGGACCCCGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | TTCCCAGGACTCCTCTGGGAGAGCCCTTGGCCTTTCTaGTTGCGCCCCTGGAGGCACAGGTGCATGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FPGLLWESPWPF*LRPWRHRCMCR Trigger: CCTGCACATGCACCTGTGCCTCCAGGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | AGGGCACCCCTCTCCTCTTACTATGGGCTGGGGTCCTaGGTCTGGACAACACCCTTGCAGGACACAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAPLSSYYGLGS*VWTTPLQDTAG Trigger: GCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CCCCTCTCCTCTTACTATGGGCTGGGGTCCTGGGTCTaGACAACACCCTTGCAGGACACAGCTGGCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLSSYYGLGSWV*TTPLQDTAGSS Trigger: GGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | TGGACCTCCAGGAAGGGCACCCCTCTCCTCTTACTATaGGCTGGGGTCCTGGGTCTGGACAACACCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WTSRKGTPLLLL*AGVLGLDNTLA Trigger: TGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAGGGGTGCCCTTCCTGGAGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | GCCAGCACACCGAACTCGTTGTTTGAGGGCTTTGGGTaGGATAGAGATGTGCCTCGGTGGCCCAGAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASTPNSLFEGFG*DRDVPRWPRGS Trigger: GCTGCCTCTGGGCCACCGAGGCACATCTCTATCTCACCCAAAGCCCTCAAACAACGAGTTCGGTGTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | ACTATGGGCTGGGGTCCTGGGTCTGGACAACACCCTTaGAGGACACAGCTGGCTCTTCCAGCCACAGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: TMGWGPGSGQHP*RTQLALPATEY Trigger: GTACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | GGGTACCCTTCCTGGAGGCTGGGGCACTCAAAGACCTaGGCTTTCTCTTCCCTGTGCCTGGCTTTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GYPSWRLGHSKT*AFSSLCLAFSS Trigger: GGAAGAGAAAGCCAGGCACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGAAGGGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | GGCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTaGGTGCACTTGGGGTTCCCATTCTGGGAGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPSPLEPGVGHL*VHLGFPFWEPT Trigger: TGTGGGCTCCCAGAATGGGAACCCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | ACTCGTTGTTTGAGGGCTTTGGGTGAGATAGAGATGTaGCTCGGTGGCCCAGAGGCAGCCTGCTGCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: TRCLRALGEIEM*LGGPEAACCSV Trigger: AACCGAGCAGCAGGCTGCCTCTGGGCCACCGAGGCACATCTCTATCTCACCCAAAGCCCTCAAACAACGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | GGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTaGAGCCAAGGTGCTGGTTCTTCGGCTACCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAAGAGLLFWNL*SQGAGSSATCS Trigger: AGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CAATGGTGCTGGGCTCCTGGGCAGAAACCACATTGGTaGCTTTGGCATCTTTCTGAACTCGGGCCCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QWCWAPGQKPHW*LWHLSELGPLS Trigger: GGAGAGGGGCCCGAGTTCAGAAAGATGCCAAAGCCACCAATGTGGTTTCTGCCCAGGAGCCCAGCACCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | GCTCAATGGTGCTGGGCTCCTGGGCAGAAACCACATTaGTGGCTTTGGCATCTTTCTGAACTCGGGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AQWCWAPGQKPH*WLWHLSELGPL Trigger: GAGGGGCCCGAGTTCAGAAAGATGCCAAAGCCACCAATGTGGTTTCTGCCCAGGAGCCCAGCACCATTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CTCTTGCCAGCGAGAGCAGGGCCTCGTCTGCTTCCTTaGCCACTTCTTGCAAATGTCTGGCCACGAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLPARAGPRLLP*PLLANVWPRDA Trigger: TGCATCTCGTGGCCAGACATTTGCAAGAAGTGGCCAAGGAAGCAGACGAGGCCCTGCTCTCGCTGGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CTCTTGAACCTGGTGTTGGTCACCTTTGAGTGCACTTaGGGTTCCCATTCTGGGAGCCCACACAGGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: LLNLVLVTFECT*GSHSGSPHRAH Trigger: GTGTGCCCTGTGTGGGCTCCCAGAATGGGAACCCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CAA 90 bp | CTCTCCTCTTACTATGGGCTGGGGTCCTGGGTCTGGACAACACCCTaGCAGGACACAGCTGGCTCTTCCAGCCACAGAGTACATATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSSYYGLGSWVWTTP*QDTAGSSSHRVHIL Trigger: CAGAATATGTACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCCATAGTAAGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | AAGGTGCTGGTTCTTCGGCTACCTGCTCTTCCTCCTTaGAAGAAGCTGCTTCCCTCACCCAGACCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KVLVLRLPALPP*KKLLPSPRPSR Trigger: CCTGGATGGTCTGGGTGAGGGAAGCAGCTTCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | GTCCTGGGTCTGGACAACACCCTTGCAGGACACAGCTaGCTCTTCCAGCCACAGAGTACATATTCTGACGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLGLDNTLAGHS*LFQPQSTYSDE Trigger: CTCGTCAGAATATGTACTCTGTGGCTGGAAGAGCCAGCTGTGTCCTGCAAGGGTGTTGTCCAGACCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CTGCTCGGTTTTAGATCGGGTACCCTTCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTTCTCTTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGFRSGTLPGG*GTQRPELSLPC Trigger: ACAGGGAAGAGAAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGAAGGGTACCCGATCTAAAACCGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS TCA 72 bp | CTTTGGCATCTTTCTGAACTCGGGCCCCTCTCCTCTTaGACCTGGTGTTGGTCACCTTTGAGTGCACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWHLSELGPLSS*TWCWSPLSALG Trigger: CCCAAGTGCACTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAGAAAGATGCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | AGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTaGTGGTTCTTCGGCTACCTGCTCTTCCTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWPALLEPLEPR*WFFGYLLFLLE Trigger: TTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CAAACCAGCGTTCCTTGCTCAATGGTGCTGGGCTCCTaGGCAGAAACCACATTGGTGGCTTTGGCATCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: QTSVPCSMVLGS*AETTLVALASF Trigger: GAAAGATGCCAAAGCCACCAATGTGGTTTCTGCCCAGGAGCCCAGCACCATTGAGCAAGGAACGCTGGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | AGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTGGTaGCTCTTAACACATCCCCTTCCACTTCAGAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RVSSLSNLATLW*LLTHPLPLQSA Trigger: CGCGCTCTGAAGTGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | TGGCCTGCTCTTTTGGAACCTTTGGAGCCAAGGTGCTaGTTCTTCGGCTACCTGCTCTTCCTCCTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WPALLEPLEPRC*FFGYLLFLLER Trigger: TCTTTCAAGGAGGAAGAGCAGGTAGCCGAAGAACCAGCACCTTGGCTCCAAAGGTTCCAAAAGAGCAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
||
| CDS CCA 72 bp | CTTCCCTCTTTGATTTCCAAAGATCGTCCAGCCACCTaGAGGGTTTTCTGCCCTTCACGATGTCCAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LPSLISKDRPAT*RVFCPSRCPAG Trigger: ACCTGCTGGACATCGTGAAGGGCAGAAAACCCTCCAGGTGGCTGGACGATCTTTGGAAATCAAAGAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS CCA 72 bp | CCAAGGGTGTCTTCTTTGAGTAACTTGGCCACACTCTaGTGCCTCTTAACACATCCCCTTCCACTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRVSSLSNLATL*CLLTHPLPLQS Trigger: GCTCTGAAGTGGAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCAAAGAAGACACCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
||
| CDS CAA 72 bp | CCTCCAGGTAGGTCTCAATGCAGAAGACTTCCCTCTTaGATTTCCAAAGATCGTCCAGCCACCTGGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PPGRSQCRRLPS*ISKDRPATWRV Trigger: AACCCTCCAGGTGGCTGGACGATCTTTGGAAATCAAAGAGGGAAGTCTTCTGCATTGAGACCTACCTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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| CDS GCA 72 bp | GATGCAGCTGGTCATCGTCCTCCAGGTAGGTCTCAATaGAGAAGACTTCCCTCTTTGATTTCCAAAGATCGT | + |
|
Preference number: 6 (lower is better) Translates to: DAAGHRPPGRSQ*RRLPSLISKDR Trigger: ACGATCTTTGGAAATCAAAGAGGGAAGTCTTCTGCATTGAGACCTACCTGGAGGACGATGACCAGCTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114119.2 |
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