Pregenerated sensors for PWWP4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071745Ensembl transcript IDs: ENSMUST00000080324.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGGCGCTGACCTAGGCTaGAGCTGCTGGAGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDGADLG*SCWSWP Trigger: AGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACCTGGGGTCCTGGGTCTaGACAACACCCTTGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDLGSWV*TTPLQA Trigger: GGCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAG...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCCCCGGGTACCCTCCCTaGAGGCTGGGGCACTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLPGYPP*RLGHSK Trigger: CTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCCGGG...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACATGGTGCTGGGCCCCTaGGCAGAAGCCACGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDMVLGP*AEATLV Trigger: CACCAACGTGGCTTCTGCCCAGGGGCCCAGCACCAT...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACGAGGGCTCTCCTGTATaGCCTGGTCTGACCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDEGSPV*PGLTWR Trigger: TCGCCAGGTCAGACCAGGGCATACAGGAGAGCCCTC...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTTCCCCTGCTCGCACTaGAGGCACATTCTGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDFPCSH*RHILGA Trigger: GGCTCCCAGAATGTGCCTGCAGTGCGAGCAGGGGAA...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACAGCCTGGGCTTCCCCTaGTCGCACTGCAGGCACATT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDSLGFP*SHCRHI Trigger: AATGTGCCTGCAGTGCGAGCAGGGGAAGCCCAGGCT...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACGGTCCAGAGGCAGCCTaGTGCTCGTTTTTAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDGPEAA*CSFLAR Trigger: CCGGGCTAAAAACGAGCAGCAGGCTGCCTCTGGACC...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACTGGGAGCCCGCACAGTaGACACAGCACATGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDWEPAQ*TQHMGL Trigger: AAGCCCCATGTGCTGTGTGCACTGTGCGGGCTCCCA...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCCTGGGCGTACAGTCTaGTGGCTCTCCTCACGAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDPGRTV*WLSSRV Trigger: CACTCGTGAGGAGAGCCAGCAGACTGTACGCCCAGG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR TCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGGGCACTCAAAGACCTaGGCTTGGATGTGCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDGHSKT*AWMCLA Trigger: AGCCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACTCTGGACAACACCCTTaGAGGCCACAGCTGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDSGQHP*RPQLAL Trigger: AAGGGCCAGCTGTGGCCTGCAAGGGTGTTGTCCAGA...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCCTTGGCCTTTCTGGTTaGGCCCTTGGAGGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLLGLSG*ALGGTG Trigger: GCCTGTGCCTCCAAGGGCGCAACCAGAAAGGCCAAG...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCCTTGCAGGCCACAGCTaGCCCTTCCAGCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLLAGHS*PFQPQS Trigger: ACTCTGTGGCTGGAAGGGCCAGCTGTGGCCTGCAAG...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCACCCTCCCTGGAGGCTaGGGCACTCAAAGACCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLTLPGG*GTQRPE Trigger: CTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGT...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACAGAGATGTGCCTCAGTaGTCCAGAGGCAGCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDRDVPQ*SRGSLL Trigger: CAGCAGGCTGCCTCTGGACCACTGAGGCACATCTCT...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCCCTTTGGAGCCACGGTaGTGGTTCTTTGGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLPLEPR*WFFGHL Trigger: CAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGG...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCTCTCCTCTTACTATTaGCTGGGGTCCTGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDLSSYY*LGSWVW Trigger: CCAGACCCAGGACCCCAGCCAATAGTAAGAGGAGAG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACACGGTGCTGGTTCTTTaGCCACCTGCTCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDTVLVL*PPALPP Trigger: AGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGT...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCTTGGAGCCACGGTGCTaGTTCTTTGGCCACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLLEPRC*FFGHLL Trigger: GAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAA...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACGGTGAGATAGAGATGTaGCTCAGTGGTCCAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDGEIEM*LSGPEA Trigger: TGCCTCTGGACCACTGAGGCACATCTCTATCTCACC...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCGCTGGCCTGCTCTTTTaGAACCTTTGGAGCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLAGLLF*NLWSHG Trigger: ACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGC...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTGTCTCCGAGTAACTTaGCCACACTCTGGTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDCLRVT*PHSGAS Trigger: AGAGGCACCAGAGTGTGGCCAAGTTACTCGGAGACA...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCCTTAACACATCCCCTTaGATTTCAGAGCGCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPRCSSLEALPVSCLGRLLNTSP*ISERGR Trigger: CCTCCCGCGCTCTGAAATGCAAGGGGATGTGTTAAG...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCAGGTACTTCTCTTCTaGCTCCTTGTAGGTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDQVLLF*LLVGEL Trigger: GAGCTCACCTACAAGGAGGCAGAAGAGAAGTACCTG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGAGCTTGGATGTGCCTaGCTTTCTCTTCCCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDELGCA*LSLPWI Trigger: AATCCAGGGAAGAGAAAGCCAGGCACATCCAAGCTC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCCACGTTGGTGGCTTTaGCATCTTTTTGAACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDPRWWL*HLFELG Trigger: CCCGAGTTCAAAAAGATGCCAAAGCCACCAACGTGG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGGGCAGAAGCCACGTTaGTGGCTTTGGCATCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDGQKPR*WLWHLF Trigger: AAAAAGATGCCAAAGCCACCAACGTGGCTTCTGCCC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR GCA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGGTTCTTTGGCCACCTaGTCTTCCTCCTTGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDGSLAT*SSSLKQ Trigger: TTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CCA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACCAGAAGCCACGTTGGTaGCTTTGGCATCTTTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: CSSLEALPVSCLGRLRGDQKPRW*LWHLFE Trigger: TTCAAAAAGATGCCAAAGCCACCAACGTGGCTTCTG...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | GCTCGCACTGCAGGCACATTCTGGGAGCCCATCATCGCAGGACTCTaGCCCGGGCGGCCCCGCTTCCCAGGACTCCTCTGGGAGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ARTAGTFWEPIIAGL*PGRPRFPGLLWESP Trigger: AGGGCTCTCCCAGAGGAGTCCTGGGAAGCGGGGCCGCCCGGGTCAGAGTCCTGCGATGATGGGCTCCCAGAATGTGCCTGCAGTGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | GGTTGCGCCCTTGGAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GCALGGTGADLGWSC*SWPALLEPLEPRCW Trigger: CCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | GAGAGCCCTTGGCCTTTCTGGTTGCGCCCTTGGAGGCACAGGCGCTaGCCTAGGCTGGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: ESPWPFWLRPWRHRR*PRLELLELACSFGT Trigger: GGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACCAGAAAGGCCAAGGGCTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 90 bp | TCTGGTTGCGCCCTTGGAGGCACAGGCGCTGACCTAGGCTGGAGCTaGTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTGC | + |
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Preference number: 5 (lower is better) Translates to: SGCALGGTGADLGWS*WSWPALLEPLEPRC Trigger: GCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | CTTGAAACAAGCTGGTTCCCTCGCCCAGAACATCCAGGGCCACCTTaGGGGCTCTCCTGTATGCCCTGGTCTGACCTGGCGAGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: LETSWFPRPEHPGPP*GLSCMPWSDLASPC Trigger: GCAGGGGCTCGCCAGGTCAGACCAGGGCATACAGGAGAGCCCTCAAGGTGGCCCTGGATGTTCTGGGCGAGGGAACCAGCTTGTTTCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | GGCCTTTCTGGTTGCGCCCTTGGAGGCACAGGCGCTGACCTAGGCTaGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: GLSGCALGGTGADLG*SCWSWPALLEPLEP Trigger: TGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACCAGAAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 90 bp | GCTTTGGGTGAGATAGAGATGTGCCTCAGTGGTCCAGAGGCAGCCTaGTGCTCGTTTTTAGCCCGGGTACCCTCCCTGGAGGCTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ALGEIEMCLSGPEAA*CSFLARVPSLEAGA Trigger: TGCCCCAGCCTCCAGGGAGGGTACCCGGGCTAAAAACGAGCAGCAGGCTGCCTCTGGACCACTGAGGCACATCTCTATCTCACCCAAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | GCCCTTGGAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTGGAGCTaGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTGCTGGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: ALGGTGADLGWSCWS*PALLEPLEPRCWFF Trigger: AAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | GGCAGCCTGCTGCTCGTTTTTAGCCCGGGTACCCTCCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTGGATGTGCCTGGCTTTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: GSLLLVFSPGTLPGG*GTQRPELGCAWLSL Trigger: AAGAGAAAGCCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCCGGGCTAAAAACGAGCAGCAGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | GGCTCTCCTGTATGCCCTGGTCTGACCTGGCGAGCCCCTGCCCCGTaGCTCCTTTCCTGCCAAGGAGGCGATGCTTATGATTTCAGACTT | + |
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Preference number: 5 (lower is better) Translates to: GSPVCPGLTWRAPAP*LLSCQGGDAYDFRL Trigger: AAGTCTGAAATCATAAGCATCGCCTCCTTGGCAGGAAAGGAGTCACGGGGCAGGGGCTCGCCAGGTCAGACCAGGGCATACAGGAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGTCTGGACAACACCCTaGCAGGCCACAGCTGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDVWTTP*QATAGP Trigger: AGGGCCAGCTGTGGCCTGCAAGGGTGTTGTCCAGAC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCCTTTGAGTCTGGCTTaGGGGTCCCCGGGCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDPLSLA*GSPGQD Trigger: ATCCTGGCCCGGGGACCCCAAAGCCAGACTCAAAGG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACCTGCCGATGCCCCCTTaGAGTCTGGCTTTGGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGRLRGDLPMPP*SLALGS Trigger: GGACCCCAAAGCCAGACTCAAAGGGGGCATCGGCAG...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACCGGGCCCCTCTCCTCTaGAACCTGGTGTTGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDRAPLL*NLVLVT Trigger: GGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCG...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | TTTGGAGCCACGGTGCTGGTTCTTTGGCCACCTGCTCTTCCTCCTTaGAACAAGCTGGTTCCCTCGCCCAGAACATCCAGGGCCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: FGATVLVLWPPALPP*NKLVPSPRTSRATL Trigger: CAAGGTGGCCCTGGATGTTCTGGGCGAGGGAACCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS TCA 90 bp | TTGAACTCGGGCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTaGATGCACTTGGGGTTCCCGTTCTGGGAGCCCGCACAGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: LNSGPSPLEPGVGHL*MHLGFPFWEPAQCT Trigger: TGTGCACTGTGCGGGCTCCCAGAACGGGAACCCCAAGTGCATTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 90 bp | TCTCCTCTTACTATTGGCTGGGGTCCTGGGTCTGGACAACACCCTTaGAGGCCACAGCTGGCCCTTCCAGCCACAGAGTACATACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SPLTIGWGPGSGQHP*RPQLALPATEYILC Trigger: GCAGAGTATGTACTCTGTGGCTGGAAGGGCCAGCTGTGGCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCAATAGTAAGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | ACCTCGGAGCTCCTCACTCTCATCTTCTCACCCACAGGCAGTATTTaGACCTCCAGGAAGGGCGCCCCTCTCCTCTTACTATTGGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TSELLTLIFSPTGSI*TSRKGAPLLLLLAG Trigger: CCCAGCCAATAGTAAGAGGAGAGGGGCGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGTGAGAAGATGAGAGTGAGGAGCTCCGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | CTCCCTGGAGGCTGGGGCACTCAAAGACCTGAGCTTGGATGTGCCTaGCTTTCTCTTCCCTGGATTACCGCCAGCTTTTCCCAAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: LPGGWGTQRPELGCA*LSLPWITASFSQGC Trigger: ACACCCTTGGGAAAAGCTGGCGGTAATCCAGGGAAGAGAAAGCCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACACCCACAGGCAGTATTaGGACCTCCAGGAAGGGCGC | + |
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Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGRLRGDTHRQY*DLQEGR Trigger: GCGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGT...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACCACGGTGCTGGTTCTTaGGCCACCTGCTCTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGRLRGDHGAGS*ATCSSS Trigger: GGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTG...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 90 bp | AGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTaGTGGTTCTTTGGCCACCTGCTCTTCCTCCTTGAAACAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SCWSWPALLEPLEPR*WFFGHLLFLLETSW Trigger: CCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCACATCCAGGGCCACCTaGAGGGCTCTCCTGTATGCC | + |
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Preference number: 5 (lower is better) Translates to: SPRCSSLEALPVSCLGRLTSRAT*RALLYA Trigger: GGCATACAGGAGAGCCCTCAAGGTGGCCCTGGATGT...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGTGTCTCCGAGTAACTaGGCCACACTCTGGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDVSPSN*ATLWCL Trigger: GAGGCACCAGAGTGTGGCCAAGTTACTCGGAGACAC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 90 bp | AAACCTCACTTTGTCTCCTCTTGCCAGCGAGAGCAGGGCCTCGTCTaGTTCCTTGGCCACTTCTTGCAAATGTCTGGCCACGAGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: KPHFVSSCQREQGLV*FLGHFLQMSGHEMQ Trigger: CTGCATCTCGTGGCCAGACATTTGCAAGAAGTGGCCAAGGAAGCAGACGAGGCCCTGCTCTCGCTGGCAAGAGGAGACAAAGTGAGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 90 bp | TGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTGCTaGTTCTTTGGCCACCTGCTCTTCCTCCTTGAAACAAGCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: CWSWPALLEPLEPRC*FFGHLLFLLETSWF Trigger: GAACCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACGGCTTTGGCATCTTTTaGAACTCGGGCCCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDGFGIF*NSGPSP Trigger: AGGAGAGGGGCCCGAGTTCAAAAAGATGCCAAAGCC...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACACCTGCTCTTCCTCCTaGAAACAAGCTGGTTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGRLRGDTCSSS*KQAGSL Trigger: GAGGGAACCAGCTTGTTTCAAGGAGGAAGAGCAGGT...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGACTGGGCAGAAGCCACGTaGGTGGCTTTGGCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CSSLEALPVSCLGRLRGDWAEAT*VALASF Trigger: AAAAGATGCCAAAGCCACCAACGTGGCTTCTGCCCA...GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCACTGAGAAGCACCAGTaGATGCCCTGGGCGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPRCSSLEALPVSCLGRLTEKHQ*MPWAYS Trigger: ACTGTACGCCCAGGGCATCAACTGGTGCTTCTCAGT...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | TCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCTTCCTTGGCCACTTCTaGCAAATGTCTGGCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPRCSSLEALPVSCLGRLFLGHF*QMSGHE Trigger: CTCGTGGCCAGACATTTGCAAGAAGTGGCCAAGGAA...GAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS-3UTR CAA 90 bp | GGTCTCCCAGATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACATGGTAAACCTCACTTaGTCTCCTCTTGCCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPDVPVWRHFLSPVLGDMVNLT*SPLASE Trigger: CTCGCTGGCAAGAGGAGACAAAGTGAGGTTTACCAT...GTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | CAGGACTCCTCTGGGAGAGCCCTTGGCCTTTCTGGTTaGGCCCTTGGAGGCACAGGCGCTGACCTAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QDSSGRALGLSG*ALGGTGADLGW Trigger: CCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACCAGAAAGGCCAAGGGCTCTCCCAGAGGAGTCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | CTTTGGGGTCCCCGGGCCAGGATGGTCCTTGTTCTCTaGGAGGGCGGTCTTCCTTTGGGCTCCAGTTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LWGPRARMVLVL*EGGLPLGSSCP Trigger: CGGGCAACTGGAGCCCAAAGGAAGACCGCCCTCGCAGAGAACAAGGACCATCCTGGCCCGGGGACCCCAAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | GGTTGCGCCCTTGGAGGCACAGGCGCTGACCTAGGCTaGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: GCALGGTGADLG*SCWSWPALLEP Trigger: AGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAGGGCGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | CTCCAGGAAGGGCGCCCCTCTCCTCTTACTATTGGCTaGGGTCCTGGGTCTGGACAACACCCTTGCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQEGRPSPLTIG*GPGSGQHPCRP Trigger: TGGCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCAATAGTAAGAGGAGAGGGGCGCCCTTCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | GGACCTCCAGGAAGGGCGCCCCTCTCCTCTTACTATTaGCTGGGGTCCTGGGTCTGGACAACACCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GPPGRAPLSSYY*LGSWVWTTPLQ Trigger: CTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCAATAGTAAGAGGAGAGGGGCGCCCTTCCTGGAGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | ACTATTGGCTGGGGTCCTGGGTCTGGACAACACCCTTaGAGGCCACAGCTGGCCCTTCCAGCCACAGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: TIGWGPGSGQHP*RPQLALPATEY Trigger: GTACTCTGTGGCTGGAAGGGCCAGCTGTGGCCTGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCAATAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | CTTGGAGGCACAGGCGCTGACCTAGGCTGGAGCTGCTaGAGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGGTGADLGWSC*SWPALLEPLEP Trigger: TGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTCAGCGCCTGTGCCTCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | CTGCTCGTTTTTAGCCCGGGTACCCTCCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTGGATGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLVFSPGTLPGG*GTQRPELGCAW Trigger: CCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCCGGGCTAAAAACGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 72 bp | TGGACCTCCAGGAAGGGCGCCCCTCTCCTCTTACTATaGGCTGGGGTCCTGGGTCTGGACAACACCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WTSRKGAPLLLL*AGVLGLDNTLA Trigger: TGCAAGGGTGTTGTCCAGACCCAGGACCCCAGCCAATAGTAAGAGGAGAGGGGCGCCCTTCCTGGAGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | TACAGCAGTATGAGCCTGGGCTTCCCCTGCTCGCACTaGAGGCACATTCTGGGAGCCCATCATCGCAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: YSSMSLGFPCSH*RHILGAHHRRT Trigger: AGTCCTGCGATGATGGGCTCCCAGAATGTGCCTGCAGTGCGAGCAGGGGAAGCCCAGGCTCATACTGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | GGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTTaGAGCCACGGTGCTGGTTCTTTGGCCACCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GAAGAGLLFWNL*SHGAGSLATCS Trigger: AGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 72 bp | TGGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTaGGAGCCACGGTGCTGGTTCTTTGGCCACCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSCWSWPALLEP*EPRCWFFGHLL Trigger: GAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 72 bp | CCCTCCCTGGAGGCTGGGGCACTCAAAGACCTGAGCTaGGATGTGCCTGGCTTTCTCTTCCCTGGATTACCG | + |
|
Preference number: 6 (lower is better) Translates to: PSLEAGALKDLS*DVPGFLFPGLP Trigger: CGGTAATCCAGGGAAGAGAAAGCCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 90 bp | GACCTAGGCTGGAGCTGCTGGAGCTGGCCTGCTCTTTTGGAACCTTaGGAGCCACGGTGCTGGTTCTTTGGCCACCTGCTCTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLGWSCWSWPALLEP*EPRCWFFGHLLFLL Trigger: AAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCTCCAGCAGCTCCAGCCTAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 90 bp | CACCTCGGAGCTCCTCACTCTCATCTTCTCACCCACAGGCAGTATTaGGACCTCCAGGAAGGGCGCCCCTCTCCTCTTACTATTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLGAPHSHLLTHRQY*DLQEGRPSPLTIGW Trigger: CCAGCCAATAGTAAGAGGAGAGGGGCGCCCTTCCTGGAGGTCCAAATACTGCCTGTGGGTGAGAAGATGAGAGTGAGGAGCTCCGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 90 bp | CTTTGGAGCCACGGTGCTGGTTCTTTGGCCACCTGCTCTTCCTCCTaGAAACAAGCTGGTTCCCTCGCCCAGAACATCCAGGGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LWSHGAGSLATCSSS*KQAGSLAQNIQGHL Trigger: AAGGTGGCCCTGGATGTTCTGGGCGAGGGAACCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | CCTCGTCTGCTTCCTTGGCCACTTCTTGCAAATGTCTaGCCACGAGATGCAGCTGGTCCTCGTCCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PRLLPWPLLANV*PRDAAGPRPPG Trigger: ACCTGGAGGACGAGGACCAGCTGCATCTCGTGGCCAGACATTTGCAAGAAGTGGCCAAGGAAGCAGACGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | AACCTTTGGAGCCACGGTGCTGGTTCTTTGGCCACCTaGTCTTCCTCCTTGAAACAAGCTGGTTCCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLWSHGAGSLAT*SSSLKQAGSLA Trigger: GGCGAGGGAACCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | CCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTGAATaGACTTGGGGTTCCCGTTCTGGGAGCCCGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLLLNLVLVTFE*TWGSRSGSPHS Trigger: ACTGTGCGGGCTCCCAGAACGGGAACCCCAAGTGCATTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | GGCTGGGGCACTCAAAGACCTGAGCTTGGATGTGCCTaGCTTTCTCTTCCCTGGATTACCGCCAGCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GWGTQRPELGCA*LSLPWITASFS Trigger: GGAAAAGCTGGCGGTAATCCAGGGAAGAGAAAGCCAGGCACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 72 bp | CACGGTGCTGGTTCTTTGGCCACCTGCTCTTCCTCCTaGAAACAAGCTGGTTCCCTCGCCCAGAACATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGAGSLATCSSS*KQAGSLAQNIQ Trigger: CTGGATGTTCTGGGCGAGGGAACCAGCTTGTTTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | AGCTGGCCTGCTCTTTTGGAACCTTTGGAGCCACGGTaGTGGTTCTTTGGCCACCTGCTCTTCCTCCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SWPALLEPLEPR*WFFGHLLFLLE Trigger: TTCAAGGAGGAAGAGCAGGTGGCCAAAGAACCAGCACCGTGGCTCCAAAGGTTCCAAAAGAGCAGGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS GCA 72 bp | AAGAACTTCCATGGTAAACCTCACTTTGTCTCCTCTTaGCAGCGAGAGCAGGGCCTCGTCTGCTTCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KNFHGKPHFVSS*QREQGLVCFLG Trigger: GCCAAGGAAGCAGACGAGGCCCTGCTCTCGCTGGCAAGAGGAGACAAAGTGAGGTTTACCATGGAAGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 72 bp | TTTCCTGCCAAGGAGGCGATGCTTATGATTTCAGACTaGTCTAGGGGCCTCACCTCGGAGCTCCTCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPAKEAMLMISD*SRGLTSELLTL Trigger: GAGAGTGAGGAGCTCCGAGGTGAGGCCCCTAGACAAGTCTGAAATCATAAGCATCGCCTCCTTGGCAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 90 bp | CGTGACTCCTTTCCTGCCAAGGAGGCGATGCTTATGATTTCAGACTaGTCTAGGGGCCTCACCTCGGAGCTCCTCACTCTCATCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RDSFPAKEAMLMISD*SRGLTSELLTLIFS Trigger: TGAGAAGATGAGAGTGAGGAGCTCCGAGGTGAGGCCCCTAGACAAGTCTGAAATCATAAGCATCGCCTCCTTGGCAGGAAAGGAGTCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CCA 72 bp | TTCCCAAGGGTGTCTCCGAGTAACTTGGCCACACTCTaGTGCCTCTTAACACATCCCCTTGCATTTCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPRVSPSNLATL*CLLTHPLAFQS Trigger: GCTCTGAAATGCAAGGGGATGTGTTAAGAGGCACCAGAGTGTGGCCAAGTTACTCGGAGACACCCTTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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| CDS CAA 90 bp | CAGATGATGGCTTCTGGAAAAAGAACTTCCATGGTAAACCTCACTTaGTCTCCTCTTGCCAGCGAGAGCAGGGCCTCGTCTGCTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QMMASGKRTSMVNLT*SPLASESRASSASL Trigger: CAAGGAAGCAGACGAGGCCCTGCTCTCGCTGGCAAGAGGAGACAAAGTGAGGTTTACCATGGAAGTTCTTTTTCCAGAAGCCATCATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080324.4 |
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