Pregenerated sensors for PWWP4A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000067771

Ensembl transcript IDs: ENSMUST00000088459.9, ENSMUST00000179117.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 90 bp	GACAGCAGCCATTGTGTGCCCCCACGGTCTCCCAGATGTTCCAGTTaGGAGGCACTTCCTGTCTCCTGTCTTGGGAGACTCAGGGGTGAC	+
Preference number: 2 (lower is better) Translates to: DSSHCVPPRSPRCSS*EALPVSCLGRLRGD Trigger: GTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATCTGGGAGACCGTGGGGGCACACAATGGCTGCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
3UTR CAA 72 bp	GATGTTCCAGTTTGGAGGCACTTCCTGTCTCCTGTCTaGGGAGACTCAGGGGTGACAGCTGAAAGGAGGACG	+
Preference number: 4 (lower is better) Translates to: DVPVWRHFLSPV*GDSGVTAERRT Trigger: CGTCCTCCTTTCAGCTGTCACCCCTGAGTCTCCCAAGACAGGAGACAGGAAGTGCCTCCAAACTGGAACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS CCA 90 bp	GGCAGCCTGCTGCTCGTTTTTAGCCCGGGTACCCTCCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTGGATGTACCTGGCTTTCTCTT	+
Preference number: 5 (lower is better) Translates to: GSLLLVFSPGTLPGG*GTQRPELGCTWLSL Trigger: AAGAGAAAGCCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCCGGGCTAAAAACGAGCAGCAGGCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS CCA 90 bp	CTCCCTGGAGGCTGGGGCACTCAAAGACCTGAGCTTGGATGTACCTaGCTTTCTCTTCCCTGGATTACCGCCAGCTTTTCCCAAGGGTGT	+
Preference number: 5 (lower is better) Translates to: LPGGWGTQRPELGCT*LSLPWITASFSQGC Trigger: ACACCCTTGGGAAAAGCTGGCGGTAATCCAGGGAAGAGAAAGCCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	GCAGGCACATTCTGGGAGCCCATCATCGCAGGACTCTaGCCCGGGCGGCCCCGCTTCCCAGGACTCCTCTGG	+
Preference number: 6 (lower is better) Translates to: AGTFWEPIIAGL*PGRPRFPGLLW Trigger: CCAGAGGAGTCCTGGGAAGCGGGGCCGCCCGGGTCAGAGTCCTGCGATGATGGGCTCCCAGAATGTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS GCA 72 bp	CTTCGGGGTCCCCGGGCCAGGATGGTCCTTGTTCTCTaGGAGGGCGGTCTTCCTTTGGGCTCCAGTTGCCCG	+
Preference number: 6 (lower is better) Translates to: LRGPRARMVLVL*EGGLPLGSSCP Trigger: CGGGCAACTGGAGCCCAAAGGAAGACCGCCCTCGCAGAGAACAAGGACCATCCTGGCCCGGGGACCCCGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	AGGGCCACCTTGAGGGCTCTCCTGTATGCCCTGGTCTaGCCTGGCGAGCCCCTGCCCCGTGACTCCTTTCCT	+
Preference number: 6 (lower is better) Translates to: RATLRALLYALV*PGEPLPRDSFP Trigger: AGGAAAGGAGTCACGGGGCAGGGGCTCGCCAGGTCAGACCAGGGCATACAGGAGAGCCCTCAAGGTGGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	GGCCCCTCTCCTCTTGAACCTGGTGTTGGTCACCTTTaGATGCACTTGGGGTTCCCGTTCTGGGAGCCCGCA	+
Preference number: 6 (lower is better) Translates to: GPSPLEPGVGHL*MHLGFPFWEPA Trigger: TGCGGGCTCCCAGAACGGGAACCCCAAGTGCATTCAAAGGTGACCAACACCAGGTTCAAGAGGAGAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS CCA 72 bp	CTGCTCGTTTTTAGCCCGGGTACCCTCCCTGGAGGCTaGGGCACTCAAAGACCTGAGCTTGGATGTACCTGG	+
Preference number: 6 (lower is better) Translates to: LLVFSPGTLPGG*GTQRPELGCTW Trigger: CCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCCGGGCTAAAAACGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	GGGTACCCTCCCTGGAGGCTGGGGCACTCAAAGACCTaGGCTTGGATGTACCTGGCTTTCTCTTCCCTGGAT	+
Preference number: 6 (lower is better) Translates to: GYPPWRLGHSKT*AWMYLAFSSLD Trigger: ATCCAGGGAAGAGAAAGCCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS CAA 72 bp	CCCTCCCTGGAGGCTGGGGCACTCAAAGACCTGAGCTaGGATGTACCTGGCTTTCTCTTCCCTGGATTACCG	+
Preference number: 6 (lower is better) Translates to: PSLEAGALKDLS*DVPGFLFPGLP Trigger: CGGTAATCCAGGGAAGAGAAAGCCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCCTCCAGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	CCCGTGACTCCTTTCCTGCCAAGGAGGCGATGCTTATaGTTTCAGACTTGTCTAGGGGCCTCACCTCGGAGC	+
Preference number: 6 (lower is better) Translates to: PVTPFLPRRRCL*FQTCLGASPRS Trigger: GCTCCGAGGTGAGGCCCCTAGACAAGTCTGAAATCATAAGCATCGCCTCCTTGGCAGGAAAGGAGTCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS TCA 72 bp	TGGGCAGAAGCCACGTTGGTGGCTTTGGCATCTTTTTaGACTCGGGCCCCTCTCCTCTTGAACCTGGTGTTG	+
Preference number: 6 (lower is better) Translates to: WAEATLVALASF*TRAPLLLNLVL Trigger: CAACACCAGGTTCAAGAGGAGAGGGGCCCGAGTTCAAAAAGATGCCAAAGCCACCAACGTGGCTTCTGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2
CDS CCA 72 bp	GGCTGGGGCACTCAAAGACCTGAGCTTGGATGTACCTaGCTTTCTCTTCCCTGGATTACCGCCAGCTTTTCC	+
Preference number: 6 (lower is better) Translates to: GWGTQRPELGCT*LSLPWITASFS Trigger: GGAAAAGCTGGCGGTAATCCAGGGAAGAGAAAGCCAGGTACATCCAAGCTCAGGTCTTTGAGTGCCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088459.9 ENSMUST00000179117.2