Pregenerated sensors for PWWP3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042515Ensembl transcript IDs: ENSMUST00000113041.9, ENSMUST00000113042.3, ENSMUST00000113043.8, ENSMUST00000113045.9, ENSMUST00000166444.8, ENSMUST00000169886.8, ENSMUST00000170671.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTaGCACGCTGATCTTAACTGTTTTCTACATACGCTCAAATTGCTA | + |
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Preference number: 1 (lower is better) Translates to: MDLKQQLWTVVWLYC*HADLNCFLHTLKLL Trigger: TAGCAATTTGAGCGTATGTAGAAAACAGTTAAGATCAGCGTGTCAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| 3UTR-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCATGCTAAAGCTTGCTTaGTTGGAGACAAATGACTTT | + |
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Preference number: 2 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGMLKLA*LETNDF Trigger: AAAGTCATTTGTCTCCAACCAAGCAAGCTTTAGCAT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| 3UTR-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTCATAGAAGTGTAGAATaGACAACCATTTTCTGCATG | + |
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Preference number: 2 (lower is better) Translates to: FISNLDGFEATTLDCSVAHRSVE*TTIFCM Trigger: CATGCAGAAAATGGTTGTTCATTCTACACTTCTATG...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| 3UTR-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCTAAAGCTTGCTTGGTaGGAGACAAATGACTTTATA | + |
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Preference number: 3 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGLKLAW*ETNDFI Trigger: TATAAAGTCATTTGTCTCCAACCAAGCAAGCTTTAG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| 3UTR TCA 72 bp | AATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATaGTTTACCAGTTGGCATTTATGTTATTGGAACCAA | + |
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Preference number: 3 (lower is better) Translates to: NFPVSGPSSRLE*FTSWHLCYWNQ Trigger: TTGGTTCCAATAACATAAATGCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGTAGGAAGGGAAACCTaGAAGTCCCCTGAGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGVGRET*KSPEHP Trigger: AGGGTGCTCAGGGGACTTTCAGGTTTCCCTTCCTAC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR GCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTCTCTTGGCTTGGGATaGCATAGGCAACTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGSLGLG*HRQLLP Trigger: GGGGAGCAGTTGCCTATGGCATCCCAAGCCAAGAGA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCTGAGCACAGCAGTATaGAAGCAGAGTCCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGLSTAV*KQSPPG Trigger: CCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCCTCTTTGGGGACAGTaGGATCTTCTGATGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGPLWGQ*DLLMRG Trigger: TCCCCTCATCAGAAGATCTCACTGTCCCCAAAGAGG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTGGGAGGATGTCTTGTaGCTCCTCTTTGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGWEDVL*LLFGDS Trigger: ACTGTCCCCAAAGAGGAGTCACAAGACATCCTCCCA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGTAGGAAGGGAAACCTaGAAGTCCCCTGAGCACCCT | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLVGRET*KSPEHP Trigger: AGGGTGCTCAGGGGACTTTCAGGTTTCCCTTCCTAC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCAGACAAAAGCTTGCCTaGAGCTCGGGCTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGRQKLA*SSGFFL Trigger: GAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTGAGCACAGCAGTATaGAAGCAGAGTCCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLSTAV*KQSPPG Trigger: CCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGGAATCATCACTCTCTaGGCACAGCAGTATGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGGIITL*AQQYGS Trigger: GCTTCCATACTGCTGTGCTCAGAGAGTGATGATTCC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCCTCTTTGGGGACAGTaGGATCTTCTGATGAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLPLWGQ*DLLMRG Trigger: TCCCCTCATCAGAAGATCTCACTGTCCCCAAAGAGG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTGGGAGGATGTCTTGTaGCTCCTCTTTGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLWEDVL*LLFGDS Trigger: ACTGTCCCCAAAGAGGAGTCACAAGACATCCTCCCA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGGAATCATCACTCTCTaGGCACAGCAGTATGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLGIITL*AQQYGS Trigger: GCTTCCATACTGCTGTGCTCAGAGAGTGATGATTCC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCGTAGGAAGGGAAACCTaGAAGTCCCCTGAGCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFVGRET*KSPEHP Trigger: AGGGTGCTCAGGGGACTTTCAGGTTTCCCTTCCTAC...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCTAACGCCTTTCTTTTaGGGACTCATGTCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGLTPFF*GLMSAS Trigger: TGAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCTCTTGGCTTGGGATaGCATAGGCAACTGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSLGLG*HRQLLP Trigger: GGGGAGCAGTTGCCTATGGCATCCCAAGCCAAGAGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR GCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTGGTGCCCTTTAAAATaGCCAAGAGGTGGTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLWCPLK*PRGGPL Trigger: CAGAGGACCACCTCTTGGGCATTTTAAAGGGCACCA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCATCAGGTGGCTGTTCTaGCACATTTTCAGACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGIRWLF*HIFRRC Trigger: ACAGCGTCTGAAAATGTGCCAGAACAGCCACCTGAT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGAAGCAGAGTCCTCCTaGGTGTTGCTTTCAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGEAESS*VLLSSL Trigger: CAAACTTGAAAGCAACACCCAGGAGGACTCTGCTTC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTGAGCACAGCAGTATaGAAGCAGAGTCCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLSTAV*KQSPPG Trigger: CCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGSRSSL*SSRSLL Trigger: CAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTGTAGGTTGTTCTTCTaGCATGCTTTCCTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLCRLFF*HAFLAE Trigger: CTCAGCCAGGAAAGCATGTCAGAAGAACAACCTACA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTTTTTATGAGGAGGTaGATCAGGTGGCTGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLFMRR*IRWLFW Trigger: CCAGAACAGCCACCTGATTCACCTCCTCATAAAAAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCCTCTTTGGGGACAGTaGGATCTTCTGATGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFPLWGQ*DLLMRG Trigger: TCCCCTCATCAGAAGATCTCACTGTCCCCAAAGAGG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTGGGAGGATGTCTTGTaGCTCCTCTTTGGGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFWEDVL*LLFGDS Trigger: ACTGTCCCCAAAGAGGAGTCACAAGACATCCTCCCA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTAGACAAAAGCTTGCCTaGAGCTCGGGCTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVARQKLA*SSGFFL Trigger: GAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCAGACAAAAGCTTGCCTaGAGCTCGGGCTTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFRQKLA*SSGFFL Trigger: GAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCT...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTAACGCCTTTCTTTTaGGGACTCATGTCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLTPFF*GLMSAS Trigger: TGAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCCATCTCACTTGGCATaGTCTCACCGGTTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFPSHLA*SHRLCA Trigger: TGCACACAACCGGTGAGAGCATGCCAAGTGAGATGG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTCTGACATGCTTTCCTaGCTGAGATTGGTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGSDMLS*LRLVPS Trigger: AGAAGGAACCAATCTCAGCCAGGAAAGCATGTCAGA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGATCAGGTGGCTGTTCTaGCACATTTTCAGACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLIRWLF*HIFRRC Trigger: ACAGCGTCTGAAAATGTGCCAGAACAGCCACCTGAT...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGAAGCAGAGTCCTCCTaGGTGTTGCTTTCAAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLEAESS*VLLSSL Trigger: CAAACTTGAAAGCAACACCCAGGAGGACTCTGCTTC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLSRSSL*SSRSLL Trigger: CAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCTAACGCAGCGGCACTaGCAGGATTTAAAGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGLTQRH*QDLKTK Trigger: TTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGTTAG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCAAAATGCCCAAGAGGTaGTCCTCTGTTCCTTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGKMPKR*SSVPFA Trigger: TGCAAAAGGAACAGAGGACCACCTCTTGGGCATTTT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR TCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTTTCCTCTTACTCTCTaGTGGACTTTCAGACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGFPLTL*WTFRPI Trigger: GATAGGTCTGAAAGTCCATCAGAGAGTAAGAGGAAA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTGGTGCCCTTTAAAATaGCCAAGAGGTGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAWCPLK*PRGGPL Trigger: CAGAGGACCACCTCTTGGGCATTTTAAAGGGCACCA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTGGTGCCCTTTAAAATaGCCAAGAGGTGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFWCPLK*PRGGPL Trigger: CAGAGGACCACCTCTTGGGCATTTTAAAGGGCACCA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCAAGGAAGGGTCTGTTTaGCAACAGCCTAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGKEGSV*QQPKFS Trigger: AGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCTT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTAACGCAGCGGCACTaGCAGGATTTAAAGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLTQRH*QDLKTK Trigger: TTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGTTAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGATGATTTTCCTGACTaGATAACTGATGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGDDFPD*ITDVSS Trigger: GCTGCTGACATCAGTTATCCAGTCAGGAAAATCATC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTTTCCTCTTACTCTCTaGTGGACTTTCAGACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLFPLTL*WTFRPI Trigger: GATAGGTCTGAAAGTCCATCAGAGAGTAAGAGGAAA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTGTAGGTTGTTCTTCTaGCATGCTTTCCTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVACRLFF*HAFLAE Trigger: CTCAGCCAGGAAAGCATGTCAGAAGAACAACCTACA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTTTTTATGAGGAGGTaGATCAGGTGGCTGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLFMRR*IRWLFW Trigger: CCAGAACAGCCACCTGATTCACCTCCTCATAAAAAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTAACGCCTTTCTTTTaGGGACTCATGTCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLTPFF*GLMSAS Trigger: TGAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATCAGGTGGCTGTTCTaGCACATTTTCAGACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAIRWLF*HIFRRC Trigger: ACAGCGTCTGAAAATGTGCCAGAACAGCCACCTGAT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCGAAGCAGAGTCCTCCTaGGTGTTGCTTTCAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFEAESS*VLLSSL Trigger: CAAACTTGAAAGCAACACCCAGGAGGACTCTGCTTC...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGACTTATCATCGGTCATaGAATCATCACTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLTYHRS*NHHSLS Trigger: GCTCAGAGAGTGATGATTCCATGACCGATGATAAGT...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGAAGGAAGGGTCTGTTTaGCAACAGCCTAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLKEGSV*QQPKFS Trigger: AGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCTT...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVASRSSL*SSRSLL Trigger: CAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSRSSL*SSRSLL Trigger: CAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGATGATTTTCCTGACTaGATAACTGATGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLDDFPD*ITDVSS Trigger: GCTGCTGACATCAGTTATCCAGTCAGGAAAATCATC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTACATGCTTTCCTGGCTaGGATTGGTTCCTTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVATCFPG*DWFLLS Trigger: TGAAAGAAGGAACCAATCTCAGCCAGGAAAGCATGT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTTCAACAGCAGATTTaGTTAGGACTTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLQQQI*LGLLCL Trigger: CAGACACAAAAGTCCTAAGCAAATCTGCTGTTGAAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTGTTGCTTTCAAGTTTaGGGAACTTTTTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGCCFQV*GTFYEE Trigger: CTCCTCATAAAAAGTTCCGCAAACTTGAAAGCAACA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCAATGCTTTTGATCACTaGTGGCCAAAATGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGNAFDH*WPKWVF Trigger: AAATACCCATTTTGGCCAGCAGTGATCAAAAGCATT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCTGACATGCTTTCCTaGCTGAGATTGGTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSDMLS*LRLVPS Trigger: AGAAGGAACCAATCTCAGCCAGGAAAGCATGTCAGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTCTGACATGCTTTCCTaGCTGAGATTGGTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVASDMLS*LRLVPS Trigger: AGAAGGAACCAATCTCAGCCAGGAAAGCATGTCAGA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTAACGCAGCGGCACTaGCAGGATTTAAAGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLTQRH*QDLKTK Trigger: TTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGTTAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTAAAATGCCCAAGAGGTaGTCCTCTGTTCCTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAKMPKR*SSVPFA Trigger: TGCAAAAGGAACAGAGGACCACCTCTTGGGCATTTT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTTTCCTCTTACTCTCTaGTGGACTTTCAGACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFFPLTL*WTFRPI Trigger: GATAGGTCTGAAAGTCCATCAGAGAGTAAGAGGAAA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTTTCCTCTTACTCTCTaGTGGACTTTCAGACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAFPLTL*WTFRPI Trigger: GATAGGTCTGAAAGTCCATCAGAGAGTAAGAGGAAA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTTTGCATTGAGAAATaGTTTCAGCCACTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLLCIEK*FQPLGF Trigger: AAATCCAAGTGGCTGAAATCATTTCTCAATGCAAAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTGTTGCTTTCAAGTTTaGGGAACTTTTTATGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLCCFQV*GTFYEE Trigger: CTCCTCATAAAAAGTTCCGCAAACTTGAAAGCAACA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGAATGCTTTTGATCACTaGTGGCCAAAATGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLNAFDH*WPKWVF Trigger: AAATACCCATTTTGGCCAGCAGTGATCAAAAGCATT...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGTCCTCTGTTCCTTTTaGATTGACAATAAAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGVLCSF*IDNKIY Trigger: GTAGATTTTATTGTCAATGCAAAAGGAACAGAGGAC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTACTTATCATCGGTCATaGAATCATCACTCTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVATYHRS*NHHSLS Trigger: GCTCAGAGAGTGATGATTCCATGACCGATGATAAGT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTAAGGAAGGGTCTGTTTaGCAACAGCCTAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAKEGSV*QQPKFS Trigger: AGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCTT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCAAGGAAGGGTCTGTTTaGCAACAGCCTAAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFKEGSV*QQPKFS Trigger: AGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCTT...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTGATGATTTTCCTGACTaGATAACTGATGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVADDFPD*ITDVSS Trigger: GCTGCTGACATCAGTTATCCAGTCAGGAAAATCATC...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTTCAACAGCAGATTTaGTTAGGACTTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLQQQI*LGLLCL Trigger: CAGACACAAAAGTCCTAAGCAAATCTGCTGTTGAAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCATTCCAGTTTCAAATaGACGTGTCTCATAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFHSSFK*TCLIME Trigger: CTCCATTATGAGACACGTGCATTTGAAACTGGAATG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTCATTCCAGTTTCAAATaGACGTGTCTCATAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAHSSFK*TCLIME Trigger: CTCCATTATGAGACACGTGCATTTGAAACTGGAATG...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGTCCTCTGTTCCTTTTaGATTGACAATAAAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NLDGFEATTLDCSVAILLVLCSF*IDNKIY Trigger: GTAGATTTTATTGTCAATGCAAAAGGAACAGAGGAC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTTTGCTGGCCATAATTaGTCTTTCCAATTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFFAGHN*SFQLHR Trigger: CCTGTGTAATTGGAAAGACCAATTATGGCCAGCAAA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTTTGCTGGCCATAATTaGTCTTTCCAATTACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAFAGHN*SFQLHR Trigger: CCTGTGTAATTGGAAAGACCAATTATGGCCAGCAAA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTTTGCATTGAGAAATaGTTTCAGCCACTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLCIEK*FQPLGF Trigger: AAATCCAAGTGGCTGAAATCATTTCTCAATGCAAAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR TCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTCTTTGCATTGAGAAATaGTTTCAGCCACTTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVALCIEK*FQPLGF Trigger: AAATCCAAGTGGCTGAAATCATTTCTCAATGCAAAG...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCAATGCTTTTGATCACTaGTGGCCAAAATGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFNAFDH*WPKWVF Trigger: AAATACCCATTTTGGCCAGCAGTGATCAAAAGCATT...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATTCACAGACATGATTaGCGAGATGTCAATCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAIHRHD*RDVNLF Trigger: AAAAAGATTGACATCTCGGCAATCATGTCTGTGAAT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCATTCACAGACATGATTaGCGAGATGTCAATCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFIHRHD*RDVNLF Trigger: AAAAAGATTGACATCTCGGCAATCATGTCTGTGAAT...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR GCA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTGTCCTCTGTTCCTTTTaGATTGACAATAAAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FISNLDGFEATTLDCSVAVLCSF*IDNKIY Trigger: GTAGATTTTATTGTCAATGCAAAAGGAACAGAGGAC...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| 3UTR CAA 72 bp | GCCAGAAGCTTATCTGTTTTAGGAAGTTATTTAGCTTaGACACTCTTCAAACTGGAATTTCATAGAAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLSVLGSYLA*TLFKLEFHRSV Trigger: TACACTTCTATGAAATTCCAGTTTGAAGAGTGTCAAAGCTAAATAACTTCCTAAAACAGATAAGCTTCTGGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS CCA 90 bp | CCTGAAGCTCGGGCTTCTTCCTCAAGATCTTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTGACTGTATCACGGGTAGGAAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PEARASSSRSSRSSL*SSRSLLTVSRVGRE Trigger: TTCCCTTCCTACCCGTGATACAGTCAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | TTTGTGTCCATCTCACTTGGCATGCTCTCACCGGTTGTGTGCACCTaGAACTTATCATCGGTCATGGAATCATCACTCTCTGAGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVSISLGMLSPVVCT*NLSSVMESSLSEHS Trigger: GCTGTGCTCAGAGAGTGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | GTTGCCTTTGTGTCCATCTCACTTGGCATGCTCTCACCGGTTGTGTaGACCTGCAACTTATCATCGGTCATGGAATCATCACTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAFVSISLGMLSPVV*TCNLSSVMESSLSE Trigger: CTCAGAGAGTGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAAGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | ACAGCAGTATGGAAGCAGAGTCCTCCTGGGTGTTGCTTTCAAGTTTaGGGAACTTTTTATGAGGAGGTGAATCAGGTGGCTGTTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAVWKQSPPGCCFQV*GTFYEEVNQVAVLA Trigger: TGCCAGAACAGCCACCTGATTCACCTCCTCATAAAAAGTTCCGCAAACTTGAAAGCAACACCCAGGAGGACTCTGCTTCCATACTGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | AACAGCCTAAGTTTTCTGTTGCCTTTGTGTCCATCTCACTTGGCATaGTCTCACCGGTTGTGTGCACCTGCAACTTATCATCGGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLSFLLPLCPSHLA*SHRLCAPATYHRSW Trigger: CCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAAGGCAACAGAAAACTTAGGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | CATTTTCTAACGCAGCGGCACTGGCAGGATTTAAAGACAAAAGCTTaGCTGAAGCTCGGGCTTCTTCCTCAAGATCTTCTAGATCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFLTQRHWQDLKTKA*LKLGLLPQDLLDPV Trigger: GACTGGATCTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGTTAGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS CCA 90 bp | ACTTATCATCGGTCATGGAATCATCACTCTCTGAGCACAGCAGTATaGAAGCAGAGTCCTCCTGGGTGTTGCTTTCAAGTTTGCGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TYHRSWNHHSLSTAV*KQSPPGCCFQVCGT Trigger: AGTTCCGCAAACTTGAAAGCAACACCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAGAGAGTGATGATTCCATGACCGATGATAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS GCA 90 bp | CCTCCTCAAAGATACTCTAACGCCTTTCTTTTGAGGACTCATGTCTaGCTCAACCAAAAGCACACTCGCTTTCCTCTCTTTCCGCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPQRYSNAFLLRTHV*LNQKHTRFPLFPPN Trigger: ATTAGGCGGAAAGAGAGGAAAGCGAGTGTGCTTTTGGTTGAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAGAGTATCTTTGAGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS TCA 90 bp | GCTGAGATTGGTTCCTTCTTTCACCATTTCCAGTGCCATTTTCAGTaGTCTTTCATAGGCTGTCTCCTCTCTAGGTGCAATGATGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEIGSFFHHFQCHFQ*SFIGCLLSRCNDDL Trigger: GAGGTCATCATTGCACCTAGAGAGGAGACAGCCTATGAAAGATCACTGAAAATGGCACTGGAAATGGTGAAAGAAGGAACCAATCTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 ENSMUST00000170671.8 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCAAATCTACCAGGTTCTaGTTAGCTCGGTCCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGKSTRF*LARSRA Trigger: TGCTCGGGACCGAGCTAACAAGAACCTGGTAGATTT...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS CCA 90 bp | TTTTCAGACGCTGTAGCTGTAGGTTGTTCTTCTGACATGCTTTCCTaGCTGAGATTGGTTCCTTCTTTCACCATTTCCAGTGCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSDAVAVGCSSDMLS*LRLVPSFTISSAIF Trigger: GAAAATGGCACTGGAAATGGTGAAAGAAGGAACCAATCTCAGCCAGGAAAGCATGTCAGAAGAACAACCTACAGCTACAGCGTCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGAAATCTACCAGGTTCTaGTTAGCTCGGTCCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLKSTRF*LARSRA Trigger: TGCTCGGGACCGAGCTAACAAGAACCTGGTAGATTT...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCTTTCCTGGCTGAGATaGGTTCCTTCTTTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGLSWLR*VPSFTI Trigger: AATGGTGAAAGAAGGAACCAATCTCAGCCAGGAAAG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGTCCCTTTAGATACTTaGCCTCAGCTGCCTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGVPLDT*PQLPHN Trigger: ATTATGAGGCAGCTGAGGCAAAGTATCTAAAGGGAC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGCTTTCCTGGCTGAGATaGGTTCCTTCTTTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLLSWLR*VPSFTI Trigger: AATGGTGAAAGAAGGAACCAATCTCAGCCAGGAAAG...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTTCCGCCTAATGCTTTaGATCACTGCTGGCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLFRLML*ITAGQN Trigger: ATTTTGGCCAGCAGTGATCAAAAGCATTAGGCGGAA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTGGAAAGATACTCTCTaGGCTTGGGATGCCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFWKDTL*AWDAIG Trigger: GCCTATGGCATCCCAAGCCAAGAGAGTATCTTTCCA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTGGAAAGATACTCTCTaGGCTTGGGATGCCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAWKDTL*AWDAIG Trigger: GCCTATGGCATCCCAAGCCAAGAGAGTATCTTTCCA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTAAATCTACCAGGTTCTaGTTAGCTCGGTCCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAKSTRF*LARSRA Trigger: TGCTCGGGACCGAGCTAACAAGAACCTGGTAGATTT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCTTGTGACTCCTCTTaGGGGACAGTGAGATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSCDSS*GTVRSS Trigger: AGAAGATCTCACTGTCCCCAAAGAGGAGTCACAAGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTCTAACGCCTTTCTTTaGAGGACTCATGTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVASNAFL*RTHVCL Trigger: GAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAGA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCTAACGCCTTTCTTTaGAGGACTCATGTCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSNAFL*RTHVCL Trigger: GAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCGTGAAACTCTTTGCATaGAGAAATGATTTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGVKLFA*RNDFSH Trigger: GTGGCTGAAATCATTTCTCAATGCAAAGAGTTTCAC...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCCACTACCTCATCCAGTaGATCTTCATCTTCAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGHYLIQ*IFIFKV Trigger: TACTTTGAAGATGAAGATCAACTGGATGAGGTAGTG...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATTTGCTTAGGACTTTaGTGTCTGTGCTTTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAICLGL*CLCFPR Trigger: CCGTGGAAAGCACAGACACAAAAGTCCTAAGCAAAT...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCTTTCCTGGCTGAGATaGGTTCCTTCTTTCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFLSWLR*VPSFTI Trigger: AATGGTGAAAGAAGGAACCAATCTCAGCCAGGAAAG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTTCCGCCTAATGCTTTaGATCACTGCTGGCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFFRLML*ITAGQN Trigger: ATTTTGGCCAGCAGTGATCAAAAGCATTAGGCGGAA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTTCCGCCTAATGCTTTaGATCACTGCTGGCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAFRLML*ITAGQN Trigger: ATTTTGGCCAGCAGTGATCAAAAGCATTAGGCGGAA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTCCCCCACGTTTTCATaGTATAGCTTTGGAAATATA | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGSPTFS*YSFGNI Trigger: TATATTTCCAAAGCTATACAATGAAAACGTGGGGGA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | CCAATTTTCCAGTTTCTGGTCCATCTAGTAGGTTGGAATGATTTACCAGTTGGCTCTGTTCCTTTTGCATaGACAATAAAATCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIFQFLVHLVGWNDLPVGSVPFA*TIKSTR Trigger: CCTGGTAGATTTTATTGTCAATGCAAAAGGAACAGA...GCCAACTGGTAAATCATTCCAACCTACTAGATGGACCAGAAACTGGAAAATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGGTGAAACTCTTTGCATaGAGAAATGATTTCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLVKLFA*RNDFSH Trigger: GTGGCTGAAATCATTTCTCAATGCAAAGAGTTTCAC...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
||
| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTGTCCCTTTAGATACTTaGCCTCAGCTGCCTCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAVPLDT*PQLPHN Trigger: ATTATGAGGCAGCTGAGGCAAAGTATCTAAAGGGAC...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCGTCCCTTTAGATACTTaGCCTCAGCTGCCTCATAAT | + |
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Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFVPLDT*PQLPHN Trigger: ATTATGAGGCAGCTGAGGCAAAGTATCTAAAGGGAC...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTCCCCCACGTTTTCATaGTATAGCTTTGGAAATATA | + |
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Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLSPTFS*YSFGNI Trigger: TATATTTCCAAAGCTATACAATGAAAACGTGGGGGA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | AACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTATACTGTTGTCTGTTCCTTTTGCATaGACAATAAAATCTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: NLDGFEATTLDCSVAILLSVPFA*TIKSTR Trigger: CCTGGTAGATTTTATTGTCAATGCAAAAGGAACAGA...CAACAGTATAGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCGTGAAACTCTTTGCATaGAGAAATGATTTCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFVKLFA*RNDFSH Trigger: GTGGCTGAAATCATTTCTCAATGCAAAGAGTTTCAC...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTCACTACCTCATCCAGTaGATCTTCATCTTCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVAHYLIQ*IFIFKV Trigger: TACTTTGAAGATGAAGATCAACTGGATGAGGTAGTG...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCCACTACCTCATCCAGTaGATCTTCATCTTCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFHYLIQ*IFIFKV Trigger: TACTTTGAAGATGAAGATCAACTGGATGAGGTAGTG...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTCGGCAAATACTTAGGCATTGGGACTTTTAGAAGATTACTTTTCCAAAGCTTCTCCCCCACGTTTTCATaGTATAGCTTTGGAAATATA | + |
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Preference number: 5 (lower is better) Translates to: FGKYLGIGTFRRLLFQSFSPTFS*YSFGNI Trigger: TATATTTCCAAAGCTATACAATGAAAACGTGGGGGA...GAAGCTTTGGAAAAGTAATCTTCTAAAAGTCCCAATGCCTAAGTATTTGCCGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS-3UTR CAA 90 bp | TTTATATCAAACTTAGATGGATTTGAAGCAACAACTCTGGACTGTAGTGTGGCTTCTGTTCCTTTTGCATaGACAATAAAATCTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FISNLDGFEATTLDCSVASVPFA*TIKSTR Trigger: CCTGGTAGATTTTATTGTCAATGCAAAAGGAACAGA...AGCCACACTACAGTCCAGAGTTGTTGCTTCAAATCCATCTAAGTTTGATATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | ATCCGATCAGGGAGAATTTTCTGGAAAGATACTCTCTaGGCTTGGGATGCCATAGGCAACTGCTCCCCCACG | + |
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Preference number: 6 (lower is better) Translates to: IRSGRIFWKDTL*AWDAIGNCSPT Trigger: CGTGGGGGAGCAGTTGCCTATGGCATCCCAAGCCAAGAGAGTATCTTTCCAGAAAATTCTCCCTGATCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS TCA 72 bp | CTGCAACTTATCATCGGTCATGGAATCATCACTCTCTaGGCACAGCAGTATGGAAGCAGAGTCCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LQLIIGHGIITL*AQQYGSRVLLG Trigger: ACCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAGAGAGTGATGATTCCATGACCGATGATAAGTTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS GCA 72 bp | GTGTCCATCTCACTTGGCATGCTCTCACCGGTTGTGTaGACCTGCAACTTATCATCGGTCATGGAATCATCA | + |
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Preference number: 6 (lower is better) Translates to: VSISLGMLSPVV*TCNLSSVMESS Trigger: TGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS GCA 72 bp | ACGCAGCGGCACTGGCAGGATTTAAAGACAAAAGCTTaGCTGAAGCTCGGGCTTCTTCCTCAAGATCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: TQRHWQDLKTKA*LKLGLLPQDLL Trigger: TAGAAGATCTTGAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CCA 72 bp | CGGTCATGGAATCATCACTCTCTGAGCACAGCAGTATaGAAGCAGAGTCCTCCTGGGTGTTGCTTTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: RSWNHHSLSTAV*KQSPPGCCFQV Trigger: AACTTGAAAGCAACACCCAGGAGGACTCTGCTTCCATACTGCTGTGCTCAGAGAGTGATGATTCCATGACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CCA 72 bp | CACCGGTTGTGTGCACCTGCAACTTATCATCGGTCATaGAATCATCACTCTCTGAGCACAGCAGTATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: HRLCAPATYHRS*NHHSLSTAVWK Trigger: CTTCCATACTGCTGTGCTCAGAGAGTGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CCA 72 bp | CGGGCTTCTTCCTCAAGATCTTCTAGATCCAGTCTCTaGAGCAGTAGATCACTGCTGACTGTATCACGGGTA | + |
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Preference number: 6 (lower is better) Translates to: RASSSRSSRSSL*SSRSLLTVSRV Trigger: TACCCGTGATACAGTCAGCAGTGATCTACTGCTCCAGAGACTGGATCTAGAAGATCTTGAGGAAGAAGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | CCTTTGTGTCCATCTCACTTGGCATGCTCTCACCGGTaGTGTGCACCTGCAACTTATCATCGGTCATGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PLCPSHLACSHR*CAPATYHRSWN Trigger: ATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | GGTCTGTTTGGCAACAGCCTAAGTTTTCTGTTGCCTTaGTGTCCATCTCACTTGGCATGCTCTCACCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GLFGNSLSFLLP*CPSHLACSHRL Trigger: CAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAAGGCAACAGAAAACTTAGGCTGTTGCCAAACAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | TCTCCCTACAGCCGAGGGATGGTCCCTTTAGATACTTaGCCTCAGCTGCCTCATAATCTAAGCCATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: SPYSRGMVPLDT*PQLPHNLSHQQ Trigger: CTGTTGATGGCTTAGATTATGAGGCAGCTGAGGCAAAGTATCTAAAGGGACCATCCCTCGGCTGTAGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS TCA 72 bp | CTGGGAGGATGTCTTGTGACTCCTCTTTGGGGACAGTaGGATCTTCTGATGAGGGGACGAATTTCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGGCLVTPLWGQ*DLLMRGRISLL Trigger: AAGAAGAGAAATTCGTCCCCTCATCAGAAGATCTCACTGTCCCCAAAGAGGAGTCACAAGACATCCTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS GCA 72 bp | ATCTCACTTGGCATGCTCTCACCGGTTGTGTGCACCTaGAACTTATCATCGGTCATGGAATCATCACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISLGMLSPVVCT*NLSSVMESSLS Trigger: AGAGAGTGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | AGGAAGGGTCTGTTTGGCAACAGCCTAAGTTTTCTGTaGCCTTTGTGTCCATCTCACTTGGCATGCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: RKGLFGNSLSFL*PLCPSHLACSH Trigger: GTGAGAGCATGCCAAGTGAGATGGACACAAAGGCAACAGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 90 bp | TTTCTGTTGCCTTTGTGTCCATCTCACTTGGCATGCTCTCACCGGTaGTGTGCACCTGCAACTTATCATCGGTCATGGAATCATCACTCT | + |
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Preference number: 6 (lower is better) Translates to: FLLPLCPSHLACSHR*CAPATYHRSWNHHS Trigger: AGAGTGATGATTCCATGACCGATGATAAGTTGCAGGTGCACACAACCGGTGAGAGCATGCCAAGTGAGATGGACACAAAGGCAACAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 90 bp | TCATTTTCTAACGCAGCGGCACTGGCAGGATTTAAAGACAAAAGCTaGCCTGAAGCTCGGGCTTCTTCCTCAAGATCTTCTAGATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SFSNAAALAGFKDKS*PEARASSSRSSRSS Trigger: ACTGGATCTAGAAGATCTTGAGGAAGAAGCCCGAGCTTCAGGCAAGCTTTTGTCTTTAAATCCTGCCAGTGCCGCTGCGTTAGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 90 bp | TGGTCCTCTGTTCCTTTTGCATTGACAATAAAATCTACCAGGTTCTaGTTAGCTCGGTCCCGAGCAGGCTTCATCCGATCAGGGAGAATT | + |
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Preference number: 6 (lower is better) Translates to: WSSVPFALTIKSTRF*LARSRAGFIRSGRI Trigger: AATTCTCCCTGATCGGATGAAGCCTGCTCGGGACCGAGCTAACAAGAACCTGGTAGATTTTATTGTCAATGCAAAAGGAACAGAGGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 90 bp | ATAATTCTCTCTCCCTACAGCCGAGGGATGGTCCCTTTAGATACTTaGCCTCAGCTGCCTCATAATCTAAGCCATCAACAGCAGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: IILSPYSRGMVPLDT*PQLPHNLSHQQQKL Trigger: CAATTTCTGCTGTTGATGGCTTAGATTATGAGGCAGCTGAGGCAAAGTATCTAAAGGGACCATCCCTCGGCTGTAGGGAGAGAGAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS TCA 72 bp | GTTGCTTTCAAGTTTGCGGAACTTTTTATGAGGAGGTaGATCAGGTGGCTGTTCTGGCACATTTTCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: VAFKFAELFMRR*IRWLFWHIFRR Trigger: GCGTCTGAAAATGTGCCAGAACAGCCACCTGATTCACCTCCTCATAAAAAGTTCCGCAAACTTGAAAGCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CCA 72 bp | CACCTACATCGGATTCCACAGAAGACTGATTTTGGTTaGCATAGGAGACTAGATTCTGATTTGATGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: HLHRIPQKTDFG*HRRLDSDLMGP Trigger: AGGGCCCATCAAATCAGAATCTAGTCTCCTATGCCAACCAAAATCAGTCTTCTGTGGAATCCGATGTAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS TCA 72 bp | CACATTTTCAGACGCTGTAGCTGTAGGTTGTTCTTCTaGCATGCTTTCCTGGCTGAGATTGGTTCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: HIFRRCSCRLFF*HAFLAEIGSFF Trigger: AAAGAAGGAACCAATCTCAGCCAGGAAAGCATGTCAGAAGAACAACCTACAGCTACAGCGTCTGAAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS GCA 72 bp | AGATACTCTAACGCCTTTCTTTTGAGGACTCATGTCTaGCTCAACCAAAAGCACACTCGCTTTCCTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RYSNAFLLRTHV*LNQKHTRFPLF Trigger: AAAGAGAGGAAAGCGAGTGTGCTTTTGGTTGAGGCAGACATGAGTCCTCAAAAGAAAGGCGTTAGAGTATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CCA 72 bp | TTTTTATCATCCTCATCTGCCAAGGAAGGGTCTGTTTaGCAACAGCCTAAGTTTTCTGTTGCCTTTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSSSSAKEGSV*QQPKFSVAFVS Trigger: GGACACAAAGGCAACAGAAAACTTAGGCTGTTGCCAAACAGACCCTTCCTTGGCAGATGAGGATGATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | TTTGCATTGAGAAATGATTTCAGCCACTTGGATTTTTaGGTGCCCTTTAAAATGCCCAAGAGGTGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: FALRNDFSHLDF*VPFKMPKRWSS Trigger: AGAGGACCACCTCTTGGGCATTTTAAAGGGCACCAAAAAATCCAAGTGGCTGAAATCATTTCTCAATGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 90 bp | GTGAAACTCTTTGCATTGAGAAATGATTTCAGCCACTTGGATTTTTaGGTGCCCTTTAAAATGCCCAAGAGGTGGTCCTCTGTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: VKLFALRNDFSHLDF*VPFKMPKRWSSVPF Trigger: AAAAGGAACAGAGGACCACCTCTTGGGCATTTTAAAGGGCACCAAAAAATCCAAGTGGCTGAAATCATTTCTCAATGCAAAGAGTTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 |
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| CDS CAA 72 bp | TACTCTCTGATGGACTTTCAGACCTATCTAAAACTTTaGCTGGCCATAATTGGTCTTTCCAATTACACAGGA | + |
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Preference number: 6 (lower is better) Translates to: YSLMDFQTYLKL*LAIIGLSNYTG Trigger: TCCTGTGTAATTGGAAAGACCAATTATGGCCAGCAAAAGTTTTAGATAGGTCTGAAAGTCCATCAGAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 ENSMUST00000166444.8 ENSMUST00000169886.8 ENSMUST00000170671.8 |
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| CDS CAA 90 bp | TTTTCCTCTTACTCTCTGATGGACTTTCAGACCTATCTAAAACTTTaGCTGGCCATAATTGGTCTTTCCAATTACACAGGACATATTTGC | + |
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Preference number: 6 (lower is better) Translates to: FSSYSLMDFQTYLKL*LAIIGLSNYTGHIC Trigger: GCAAATATGTCCTGTGTAATTGGAAAGACCAATTATGGCCAGCAAAAGTTTTAGATAGGTCTGAAAGTCCATCAGAGAGTAAGAGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000113041.9 ENSMUST00000113042.3 ENSMUST00000113043.8 ENSMUST00000113045.9 ENSMUST00000169886.8 ENSMUST00000170671.8 |
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