Pregenerated sensors for PWWP3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020156Ensembl transcript IDs: ENSMUST00000020365.15, ENSMUST00000130260.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTaGCAGGTCACACCCAGTGCTGGCCGGCCAGGTGCAGACTGCGGC | + |
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Preference number: 1 (lower is better) Translates to: RTGQSSHTPRPGGGL*QVTPSAGRPGADCG Trigger: GCCGCAGTCTGCACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| 3UTR TCA 90 bp | GATGGCAGCAGGCATCTGATGGCATCTGATCTCCCAGACTTAGGCTaGAGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTA | + |
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Preference number: 1 (lower is better) Translates to: DGSRHLMASDLPDLG*RRRTHAQVKVLTLL Trigger: TAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCTTCAGCCTAAGTCTGGGAGATCAGATGCCATCAGATGCCTGCTGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| 3UTR CCA 72 bp | CAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTaGCAGGTCACACCCAGTGCTGGCCGGCCAGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: QSSHTPRPGGGL*QVTPSAGRPGA Trigger: TGCACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| 3UTR TCA 72 bp | AGGCATCTGATGGCATCTGATCTCCCAGACTTAGGCTaGAGACGTAGAACCCACGCACAGGTCAAAGTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RHLMASDLPDLG*RRRTHAQVKVL Trigger: GAGAACTTTGACCTGTGCGTGGGTTCTACGTCTTCAGCCTAAGTCTGGGAGATCAGATGCCATCAGATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | GCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTGCAGATCCAGCTCCACTCTCTaGGAGGCCTGTCTTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AWWRPLAGHTQCWPARCRSSSTL*EACLGA Trigger: GGCCCCAAGACAGGCCTCTCAGAGAGTGGAGCTGGA...TCTGCACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCCCAGGGCCACACAGCTaGATGCCTGTCCCTGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTLLGLVEASGRSHPVLAPGPHS*MPVPGS Trigger: AGAGCCAGGGACAGGCATCCAGCTGTGTGGCCCTGG...GGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTCTGAAGTCTCGGTTCTaGCCAAAACCTTCGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRPGGGLWQVTPSAGRPGLKSRF*PKPSQA Trigger: GGCCTGCGAAGGTTTTGGCCAGAACCGAGACTTCAG...ACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | CTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGCTGGGACTTCATTCTaGGAGGCCAGGAAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTLLGLVEASGRSHPVLAAGTSF*EARKAA Trigger: TGCTGCCTTCCTGGCCTCTCAGAATGAAGTCCCAGC...GGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTGCAGAGCAATGTTCTCAATGTaGGACTTCTGCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AWWRPLAGHTQCWPARCRAMFSM*DFCRAS Trigger: GGAGGCCCTGCAGAAGTCGCACATTGAGAACATTGC...TCTGCACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | ACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACAGGAGGGCGGCCTAGGTaGAGCCAGGGCCACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TGQSSHTPRPGGGLWQVTGGRPR*SQGHTA Trigger: AGCTGTGTGGCCCTGGCTTCACCTAGGCCGCCCTCC...TGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTGCAGACTGTCCAGCAGTGCGTaGTTTTCCTTGCAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: AWWRPLAGHTQCWPARCRLSSSA*FSLQSK Trigger: CTTTGACTGCAAGGAAAAGCACGCACTGCTGGACAG...TCTGCACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCCTCAGGGTCCCCCTTaGCCAGCTGAGGAAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWPQGPP*PAEETW Trigger: CCAGGTTTCCTCAGCTGGGCAAGGGGGACCCTGAGG...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | CTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCAATGGCACAGATGATTaGCTCGGGCAGCAGCACATC | + |
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Preference number: 4 (lower is better) Translates to: LTLLGLVEASGRSHPVLANGTDD*LGQQHI Trigger: GATGTGCTGCTGCCCGAGGCAATCATCTGTGCCATT...GGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCAGCGTGGTCTCTTTGTaGGGCATCCTCTGCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTLLGLVEASGRSHPVLASVVSL*GILCFS Trigger: AGAGAAGCAGAGGATGCCCCACAAAGAGACCACGCT...GGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGTGGGCTACCACGGCTTaGCCATCTTCACCGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQWATTA*PSSPRR Trigger: TCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCA...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGTCCCCCTTGCCCAGCTaGGGAAACCTGGTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RRRTHAQVKVLTLLGLVESPLPS*GNLVPR Trigger: CCTGGGGACCAGGTTTCCTCAGCTGGGCAAGGGGGA...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGGAGCACTGGAGACCTaGGAGGCCACATCTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQGALET*EATSAS Trigger: AGATGCAGATGTGGCCTCGCAGGTCTCCAGTGCTCC...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCCGCAGGTGGCTCTCTaGACCCTTGGCCTTCACGAT | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWPQVAL*TLGLHD Trigger: ATCGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGG...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGCAGCTGCCTGGTAGGTaGGTTCTGGCCTCCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQQLPGR*VLASIQ Trigger: TTGGATGGAGGCCAGAACCCACCTACCAGGCAGCTG...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | CGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCGTTCTAGTCCCCAGCTaGCTGGTAGGTGGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RRTHAQVKVLTLLGLVEAVLVPS*LVGGFW Trigger: CCAGAACCCACCTACCAGGCAGCTGGGGACTAGAAC...GGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGCTCCAGGGGAGTAGCTaGGACTTCATTCTGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQLQGSS*DFILRG Trigger: GCCTCTCAGAATGAAGTCCCAGCTACTCCCCTGGAG...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGCAGCACCTTCCTGCATaGCCGCCACTGTCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RRRTHAQVKVLTLLGLVEQHLPA*PPLSQL Trigger: CAGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTG...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | ACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACATTCGCCGGACACTCTTaGCCACAGCTGGCCAGAATG | + |
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Preference number: 4 (lower is better) Translates to: TGQSSHTPRPGGGLWQVTFAGHS*PQLARM Trigger: CATTCTGGCCAGCTGTGGTCAAGAGTGTCCGGCGAA...TGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGGTGCTCTCCTGCCCATaGTCCAGCTGTAACCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWVLSCP*SSCNPE Trigger: TTCTGGGTTACAGCTGGACCATGGGCAGGAGAGCAC...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | CGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCCCCTGTGGATTCTTCTaGGGACACAGGATCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRTHAQVKVLTLLGLVEAPCGFF*GHRIFL Trigger: GAGGAAGATCCTGTGTCCTCAGAAGAATCCACAGGG...GGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGTTGGTTGTGCTCTCCTaGCCATGGTCCAGCTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWLVVLS*PWSSCN Trigger: GTTACAGCTGGACCATGGGCAGGAGAGCACAACCAA...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | ACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACAGGGAGTGTGTGGACTTaGACCCTGTGGATTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TGQSSHTPRPGGGLWQVTGSVWT*TLWILL Trigger: CAGAAGAATCCACAGGGTTCAAGTCCACACACTCCC...TGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGATGCAAGTCACGCACTaGCTGGAGCTCAGGAACGTC | + |
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Preference number: 4 (lower is better) Translates to: RRRTHAQVKVLTLLGLVEMQVTH*LELRNV Trigger: GACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCAT...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCTATCCCGTGCAGCCCTaGAGCGGTCAGGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGYPVQP*SGQAAP Trigger: AGGTGCTGCCTGACCGCTCCAGGGCTGCACGGGATA...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCCCACCAGCTTCTGGTTaGCTCTATCCCGTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGPPASG*LYPVQP Trigger: GGGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGG...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGCTGCGAGGCCACATCTaGATCTGTTTTCTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RRRTHAQVKVLTLLGLVELRGHI*ICFLLL Trigger: CAGAAGGAGAAAACAGATGCAGATGTGGCCTCGCAG...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGTCTCCCAAATTCCTCTaGCTCTTTTTGGTTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWSPKFL*LFLVVL Trigger: GAGCACAACCAAAAAGAGGCAGAGGAATTTGGGAGA...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCCACCAGCCAATGGCCTaGGCAAAGTCCTCCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGHQPMA*AKSSLA Trigger: AGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTG...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCATGGAGAAGGAGCACTaGAGACCTGCGAGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGMEKEH*RPARPH Trigger: ATGTGGCCTCGCAGGTCTCCAGTGCTCCTTCTCCAT...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCCAGAAGGATCCGAGGTaGTTCCTCCTCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGQKDPR*FLLFLL Trigger: GAGGAGGAAGAGGAGGAACCACCTCGGATCCTTCTG...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR GCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCGCCTCTTTTTGGTTGTaGTCTCCTGCCCATGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGASFWL*SPAHGP Trigger: TGGACCATGGGCAGGAGAGCACAACCAAAAAGAGGC...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCCAGAATGGGTATTTTTaGTATTTAAGCCAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RRTHAQVKVLTLLGLVEAQNGYF*YLSQTS Trigger: GCTGGTCTGGCTTAAATACCAAAAATACCCATTCTG...GGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCACAGCTGGCCAGAATaGGTATTTTTGGTATTTAAG | + |
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Preference number: 4 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWHSWPE*VFLVFK Trigger: CTTAAATACCAAAAATACCCATTCTGGCCAGCTGTG...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCAAGTCACGCACTGACTaGAGCTCAGGAACGTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: HRNFQKAAVHRWQQASDGKSRTD*SSGTSS Trigger: TGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTT...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CAAAAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCACAGGATCTTCCTCTaGTTTGTCACCCGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: QKHTETSRKQLFIDGSRHHRIFL*FVTRSS Trigger: GCTGGAGCGGGTGACAAACCAGAGGAAGATCCTGTG...ATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | AAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGTACTCCACCAGCTTCTaGTTGGCTCTATCCCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KHTETSRKQLFIDGSRHLYSTSF*LALSRA Trigger: TGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTA...CAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | AAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGGTAGTCAGTGATGAGTaGAACACACCAGCCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: KHTETSRKQLFIDGSRHLVVSDE*NTPANG Trigger: GCCATTGGCTGGTGTGTTTCACTCATCACTGACTAC...CAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR TCA 90 bp | AAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGCATTCCTACTTCAAATaGCCGTGGTTCGTGATACAG | + |
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Preference number: 4 (lower is better) Translates to: KHTETSRKQLFIDGSRHLHSYFK*PWFVIQ Trigger: CTGTATCACGAACCACGGTCATTTGAAGTAGGAATG...CAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CAAAAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATGCTGAGCTCTTAACCTaGATCTTTTCCTTCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QKHTETSRKQLFIDGSRHAELLT*IFSFSE Trigger: CTCGCTGAAGGAAAAGATCCAGGTTAAGAGCTCAGC...ATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CAAAAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATAGACACTTTCTCCCTTaGAAAGGCCAGACTCTGATC | + |
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Preference number: 4 (lower is better) Translates to: QKHTETSRKQLFIDGSRHRHFLP*KGQTLI Trigger: GATCAGAGTCTGGCCTTTCCAAGGGAGAAAGTGTCT...ATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CCA 90 bp | CAAAAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATAATCCCATCTTCTATTaGATGACTTTCAGGACTCAA | + |
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Preference number: 4 (lower is better) Translates to: QKHTETSRKQLFIDGSRHNPIFY*MTFRTQ Trigger: TTGAGTCCTGAAAGTCATCCAATAGAAGATGGGATT...ATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTAGCCAGCGTGAGGGCTaGCGGCTGTGCAAGATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPGGGLWQVTPSAGRPGSQREG*RLCKIA Trigger: GGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCT...ACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCACCCAGTCACAGCCTTaGACCCCGGCACAGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTLLGLVEASGRSHPVLATQSQP*TPAQGS Trigger: GGAGCCCTGTGCCGGGGTCAAAGGCTGTGACTGGGT...GGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CCTAGGCCTGGTGGAGGCCTCTGGCAGGTCACACCCAGTGCTGGCCGGCCAGGTTGTCTTGGGGCCCACTaGGCACCTGAGATGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRPGGGLWQVTPSAGRPGCLGAH*APEMIF Trigger: GAAGATCATCTCAGGTGCCAAGTGGGCCCCAAGACA...ACCTGGCCGGCCAGCACTGGGTGTGACCTGCCAGAGGCCTCCACCAGGCCTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 90 bp | CTGGAGCTCAGGAACGTCTTCAGCCAGCGTGAGGGCTTGCGGCTGTaGAAGATAGCCCGCAGGTGGCTCTCTGCACCCTTGGCCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LELRNVFSQREGLRL*KIARRWLSAPLAFT Trigger: CGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | TCCAAGATGAAGCGAATGCGGTCTCCACTGCCGCGCTCAGGCACCTaGCCGTCCATGTCTCTGCAGACGCCCTGCAGGTACTCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SKMKRMRSPLPRSGT*PSMSLQTPCRYSTT Trigger: GGTGGTGGAGTACCTGCAGGGCGTCTGCAGAGACATGGACGGCCAGGTGCCTGAGCGCGGCAGTGGAGACCGCATTCGCTTCATCTTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | GCAAGTCACGCACTGACTGGAGCTCAGGAACGTCTTCAGCCAGCGTaGGGGCTTGCGGCTGTGCAAGATAGCCCGCAGGTGGCTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASHALTGAQERLQPA*GLAAVQDSPQVALC Trigger: GCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | TGGCTCTCTGCACCCTTGGCCTTCACGATGTACTCCACCAGCTTCTaGTTGGCTCTATCCCGTGCAGCCCTGGAGCGGTCAGGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WLSAPLAFTMYSTSF*LALSRAALERSGST Trigger: GGTGCTGCCTGACCGCTCCAGGGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | TTCAGCCAGCGTGAGGGCTTGCGGCTGTGCAAGATAGCCCGCAGGTaGCTCTCTGCACCCTTGGCCTTCACGATGTACTCCACCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSQREGLRLCKIARR*LSAPLAFTMYSTSF Trigger: GAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGTCCACCAGCTTCTGGTaGGCTCTATCCCGTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQSTSFW*ALSRAA Trigger: GGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGA...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | AGCTGCGCCTCATCCTCCAGGTATGTCTCCATGCAAGTCACGCACTaGCTGGAGCTCAGGAACGTCTTCAGCCAGCGTGAGGGCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCASSSRYVSMQVTH*LELRNVFSQREGLR Trigger: CCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCATGGAGACATACCTGGAGGATGAGGCGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | GCGCCTCATCCTCCAGGTATGTCTCCATGCAAGTCACGCACTGACTaGAGCTCAGGAACGTCTTCAGCCAGCGTGAGGGCTTGCGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: APHPPGMSPCKSRTD*SSGTSSASVRACGC Trigger: ACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCATGGAGACATACCTGGAGGATGAGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | CTGTACTCCGACCTCCTCTTGGATGCGCACTGGGCTACCACGGCTTaGCCATCTTCACCGAGGAGAGATGGAGAAGGAGCACTGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LYSDLLLDAHWATTA*PSSPRRDGEGALET Trigger: GGTCTCCAGTGCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCATCCAAGAGGAGGTCGGAGTACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS GCA 90 bp | CCACCACCTCATCCAGCTGCGCCTCATCCTCCAGGTATGTCTCCATaGAAGTCACGCACTGACTGGAGCTCAGGAACGTCTTCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPPHPAAPHPPGMSP*KSRTDWSSGTSSAS Trigger: GCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCATGGAGACATACCTGGAGGATGAGGCGCAGCTGGATGAGGTGGTGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | TGCGCACTGGGCTACCACGGCTTGACCATCTTCACCGAGGAGAGATaGAGAAGGAGCACTGGAGACCTGCGAGGCCACATCTGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CALGYHGLTIFTEER*RRSTGDLRGHICIC Trigger: ACAGATGCAGATGTGGCCTCGCAGGTCTCCAGTGCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS-3UTR CAA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGGGATCTTCCTCTGGTTaGTCACCCGCTCCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWGSSSG*SPAPAL Trigger: CAGTGCTGGAGCGGGTGACAAACCAGAGGAAGATCC...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | AGCAAAGGAGCCGCATCCCAGCCGCACACGGTAGTCAGTGATGAGTaGAACACACCAGCCAATGGCCTGGGCAAAGTCCTCCTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKGAASQPHTVVSDE*NTPANGLGKVLLGS Trigger: AGAGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTTCACTCATCACTGACTACCGTGTGCGGCTGGGATGCGGCTCCTTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 90 bp | CCAATGGCCTGGGCAAAGTCCTCCTTGGCTCTGTCCAGCAGTGCGTaGTTTTCCTTGCAGTCAAAGTGCTTGAGCCGTCGCAGCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: PMAWAKSSLALSSSA*FSLQSKCLSRRSDT Trigger: TGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCACGCACTGCTGGACAGAGCCAAGGAGGACTTTGCCCAGGCCATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 90 bp | TGTCTTGTAATCCACCGCCTCCACCGCGGAAATGGCACAGATGATTaGCTCGGGCAGCAGCACATCCAAGATGAAGCGAATGCGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CLVIHRLHRGNGTDD*LGQQHIQDEANAVS Trigger: GGAGACCGCATTCGCTTCATCTTGGATGTGCTGCTGCCCGAGGCAATCATCTGTGCCATTTCCGCGGTGGAGGCGGTGGATTACAAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGATGTTGCCTGATGACTaGACCCAGTCACAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQMLPDD*TQSQPL Trigger: CAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACAT...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCCCTTGGGGTTCATGTaGCCCTCAATGAAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: NPRTGQSSHTPRPGGGLWPLGFM*PSMKST Trigger: TGTGCTCTTCATTGAGGGCAACATGAACCCCAAGGG...CCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | CCTCCTCTTCCTCCTCCTCCTCCTCCAGCAGGGAGTGTGTGGACTTaGACCCTGTGGATTCTTCTGAGGACACAGGATCTTCCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLPPPPPPAGSVWT*TLWILLRTQDLPLV Trigger: AACCAGAGGAAGATCCTGTGTCCTCAGAAGAATCCACAGGGTTCAAGTCCACACACTCCCTGCTGGAGGAGGAGGAGGAGGAAGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | CAGCTCCACTCTCTGAGAGGCCTGTCTTGGGGCCCACTTGGCACCTaGGATGATCTTCTAATGCAGACGACGGCAACAGGCTTTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QLHSLRGLSWGPLGT*DDLLMQTTATGFLN Trigger: GTTCAAAAAGCCTGTTGCCGTCGTCTGCATTAGAAGATCATCTCAGGTGCCAAGTGGGCCCCAAGACAGGCCTCTCAGAGAGTGGAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS GCA 90 bp | GACTCTGATCTTCGGCGCCGGGTAGGTTTCTCTCCCAAATTCCTCTaGCTCTTTTTGGTTGTGCTCTCCTGCCCATGGTCCAGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSDLRRRVGFSPKFL*LFLVVLSCPWSSCN Trigger: GTTACAGCTGGACCATGGGCAGGAGAGCACAACCAAAAAGAGGCAGAGGAATTTGGGAGAGAAACCTACCCGGCGCCGAAGATCAGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGTCTGCCTCTTTTTGGTaGTGCTCTCCTGCCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRRTHAQVKVLTLLGLVESASFW*CSPAHG Trigger: ACCATGGGCAGGAGAGCACAACCAAAAAGAGGCAGA...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGGCCTCTGGCAGTCCTCCAGGAGTTCATaGTCAAAGATTTCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTGQSSHTPRPGGGLWQSSRSS*SKISFS Trigger: GGAAAAGGAAATCTTTGACAATGAACTCCTGGAGGA...CTGCCAGAGGCCTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGAAGACACTTTCTCCCTaGGAAAGGCCAGACTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRRTHAQVKVLTLLGLVEKTLSP*ERPDSD Trigger: ATCAGAGTCTGGCCTTTCCAAGGGAGAAAGTGTCTT...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGCCAAGCGTGGTCTCTTaGTGGGGCATCCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KHTETSRKQLFIDGSRHLPSVVS*WGILCF Trigger: GAAGCAGAGGATGCCCCACAAAGAGACCACGCTTGG...CAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AAACACACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGGAGAGTGGCCTGATGTaGCCTGATGACTTGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KHTETSRKQLFIDGSRHLESGLM*PDDLTQ Trigger: CTGGGTCAAGTCATCAGGCAACATCAGGCCACTCTC...CAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | AGACGTAGAACCCACGCACAGGTCAAAGTTCTCACACTCCTAGGCCTGGTGGAGTCTTTTTCTTGTTTTTaGCTGAAGTCTCGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRTHAQVKVLTLLGLVESFSCF*LKSRFW Trigger: CCAGAACCGAGACTTCAGCAAAAAACAAGAAAAAGA...CTCCACCAGGCCTAGGAGTGTGAGAACTTTGACCTGTGCGTGGGTTCTACGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 90 bp | TGGGTATTTTTGGTATTTAAGCCAGACCAGCATTCCTACTTCAAATaGCCGTGGTTCGTGATACAGAAGGATCCGAGGTGGTTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVFLVFKPDQHSYFK*PWFVIQKDPRWFLL Trigger: GAGGAGGAACCACCTCGGATCCTTCTGTATCACGAACCACGGTCATTTGAAGTAGGAATGCTGGTCTGGCTTAAATACCAAAAATACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS-3UTR CAA 90 bp | CACAGAAACTTCCAGAAAGCAGCTGTTCATAGATGGCAGCAGGCATCTGATGGCCCAGAATGGGTATTTTaGGTATTTAAGCCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRNFQKAAVHRWQQASDGPEWVF*VFKPDQ Trigger: CTGGTCTGGCTTAAATACCAAAAATACCCATTCTGG...GCCATCAGATGCCTGCTGCCATCTATGAACAGCTGCTTTCTGGAAGTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 90 bp | TGCATCTGTTTTCTCCTTCTGAGACAGTGTAATCCCATCTTCTATTaGATGACTTTCAGGACTCAAACTGGTCCTCTCATTCAAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: CICFLLLRQCNPIFY*MTFRTQTGPLIQDI Trigger: GATGTCTTGAATGAGAGGACCAGTTTGAGTCCTGAAAGTCATCCAATAGAAGATGGGATTACACTGTCTCAGAAGGAGAAAACAGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CCA 72 bp | GGCAGCACCTTCCTGCATGGCCGCCACTGTCCCAGCTaGCTGTCCCCTACAGGCTCCTCAGGGTCCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSTFLHGRHCPS*LSPTGSSGSPL Trigger: CAAGGGGGACCCTGAGGAGCCTGTAGGGGACAGCCAGCTGGGACAGTGGCGGCCATGCAGGAAGGTGCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 72 bp | CACTGCCGCGCTCAGGCACCTGGCCGTCCATGTCTCTaGAGACGCCCTGCAGGTACTCCACCACCTCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HCRAQAPGRPCL*RRPAGTPPPHP Trigger: TGGATGAGGTGGTGGAGTACCTGCAGGGCGTCTGCAGAGACATGGACGGCCAGGTGCCTGAGCGCGGCAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 72 bp | TCAGGCACCTGGCCGTCCATGTCTCTGCAGACGCCCTaGAGGTACTCCACCACCTCATCCAGCTGCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGTWPSMSLQTP*RYSTTSSSCAS Trigger: TGAGGCGCAGCTGGATGAGGTGGTGGAGTACCTGCAGGGCGTCTGCAGAGACATGGACGGCCAGGTGCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | GCACTGACTGGAGCTCAGGAACGTCTTCAGCCAGCGTaGGGGCTTGCGGCTGTGCAAGATAGCCCGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALTGAQERLQPA*GLAAVQDSPQV Trigger: CACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 72 bp | AGGAACGTCTTCAGCCAGCGTGAGGGCTTGCGGCTGTaGAAGATAGCCCGCAGGTGGCTCTCTGCACCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RNVFSQREGLRL*KIARRWLSAPL Trigger: CAAGGGTGCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | CGTGAGGGCTTGCGGCTGTGCAAGATAGCCCGCAGGTaGCTCTCTGCACCCTTGGCCTTCACGATGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: REGLRLCKIARR*LSAPLAFTMYS Trigger: GGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | CCCTTGGCCTTCACGATGTACTCCACCAGCTTCTGGTaGGCTCTATCCCGTGCAGCCCTGGAGCGGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLAFTMYSTSFW*ALSRAALERSG Trigger: GCCTGACCGCTCCAGGGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | CTGGAGCTCAGGAACGTCTTCAGCCAGCGTGAGGGCTaGCGGCTGTGCAAGATAGCCCGCAGGTGGCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LELRNVFSQREG*RLCKIARRWLS Trigger: AGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | CTCTCTGCACCCTTGGCCTTCACGATGTACTCCACCAGCTTCTGGTaGGCTCTATCCCGTGCAGCCCTGGAGCGGTCAGGCAGCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSAPLAFTMYSTSFW*ALSRAALERSGSTF Trigger: GAAGGTGCTGCCTGACCGCTCCAGGGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | GCACCCTTGGCCTTCACGATGTACTCCACCAGCTTCTaGTTGGCTCTATCCCGTGCAGCCCTGGAGCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: APLAFTMYSTSF*LALSRAALERS Trigger: TGACCGCTCCAGGGCTGCACGGGATAGAGCCAACCAGAAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | TCAGAGGCCGAGAGTGGCCTGATGTTGCCTGATGACTaGACCCAGTCACAGCCTTTGACCCCGGCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SEAESGLMLPDD*TQSQPLTPAQG Trigger: GCCCTGTGCCGGGGTCAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACATCAGGCCACTCTCGGCCTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | GTGGGGCATCCTCTGCTTCTCTCAGAGGCCGAGAGTGGCCTGATGTaGCCTGATGACTTGACCCAGTCACAGCCTTTGACCCCGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VGHPLLLSEAESGLM*PDDLTQSQPLTPAQ Trigger: CTGTGCCGGGGTCAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACATCAGGCCACTCTCGGCCTCTGAGAGAAGCAGAGGATGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | GCCGCATCCCAGCCGCACACGGTAGTCAGTGATGAGTaGAACACACCAGCCAATGGCCTGGGCAAAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AASQPHTVVSDE*NTPANGLGKVL Trigger: GAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTTCACTCATCACTGACTACCGTGTGCGGCTGGGATGCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS GCA 72 bp | CTTGCGGCTGTGCAAGATAGCCCGCAGGTGGCTCTCTaGACCCTTGGCCTTCACGATGTACTCCACCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAAVQDSPQVAL*TLGLHDVLHQL Trigger: AAGCTGGTGGAGTACATCGTGAAGGCCAAGGGTGCAGAGAGCCACCTGCGGGCTATCTTGCACAGCCGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | GTGGGTTCTGGCCTCCATCCAAGCGTGGTCTCTTTGTaGGGCATCCTCTGCTTCTCTCAGAGGCCGAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSGLHPSVVSL*GILCFSQRPRV Trigger: CACTCTCGGCCTCTGAGAGAAGCAGAGGATGCCCCACAAAGAGACCACGCTTGGATGGAGGCCAGAACCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | TGCCCCCACAGTTCTAGTCCCCAGCTGCCTGGTAGGTaGGTTCTGGCCTCCATCCAAGCGTGGTCTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CPHSSSPQLPGR*VLASIQAWSLC Trigger: ACAAAGAGACCACGCTTGGATGGAGGCCAGAACCCACCTACCAGGCAGCTGGGGACTAGAACTGTGGGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | CGACCTCCTCTTGGATGCGCACTGGGCTACCACGGCTaGACCATCTTCACCGAGGAGAGATGGAGAAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPPLGCALGYHG*TIFTEERWRRS Trigger: GCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCATCCAAGAGGAGGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CAA 72 bp | CTGATGTTGCCTGATGACTTGACCCAGTCACAGCCTTaGACCCCGGCACAGGGCTCCTCGTCCCTGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LMLPDDLTQSQP*TPAQGSSSLVW Trigger: CCAAACCAGGGACGAGGAGCCCTGTGCCGGGGTCAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | AGCCGTCGCAGCGACACAGTGATTCCTCGGCCCTTGGGGTTCATGTaGCCCTCAATGAAGAGCACACTGGCCTTCTTGTCTCTTCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SRRSDTVIPRPLGFM*PSMKSTLAFLSLRR Trigger: CCGGCGAAGAGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATGAACCCCAAGGGCCGAGGAATCACTGTGTCGCTGCGACGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | ACTGTACTCCGACCTCCTCTTGGATGCGCACTGGGCTACCACGGCTaGACCATCTTCACCGAGGAGAGATGGAGAAGGAGCACTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TVLRPPLGCALGYHG*TIFTEERWRRSTGD Trigger: GTCTCCAGTGCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCATCCAAGAGGAGGTCGGAGTACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CAA 90 bp | TTGGCTCTGTCCAGCAGTGCGTGCTTTTCCTTGCAGTCAAAGTGCTaGAGCCGTCGCAGCGACACAGTGATTCCTCGGCCCTTGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LALSSSACFSLQSKC*SRRSDTVIPRPLGF Trigger: GAACCCCAAGGGCCGAGGAATCACTGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCACGCACTGCTGGACAGAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | GACCTCCTCTTGGATGCGCACTGGGCTACCACGGCTTaGCCATCTTCACCGAGGAGAGATGGAGAAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: DLLLDAHWATTA*PSSPRRDGEGA Trigger: TGCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTCAAGCCGTGGTAGCCCAGTGCGCATCCAAGAGGAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CCA 72 bp | GGAGCGTCGGTAAGTCAGCTCCTCCAGGGGAGTAGCTaGGACTTCATTCTGAGAGGCCAGGAAGGCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GASVSQLLQGSS*DFILRGQEGSN Trigger: ATTGCTGCCTTCCTGGCCTCTCAGAATGAAGTCCCAGCTACTCCCCTGGAGGAGCTGACTTACCGACGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CCA 72 bp | CCTCCAGGTATGTCTCCATGCAAGTCACGCACTGACTaGAGCTCAGGAACGTCTTCAGCCAGCGTGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PPGMSPCKSRTD*SSGTSSASVRA Trigger: AGCCCTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCATGGAGACATACCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | TCCAGCAGTGCGTGCTTTTCCTTGCAGTCAAAGTGCTaGAGCCGTCGCAGCGACACAGTGATTCCTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SSSACFSLQSKC*SRRSDTVIPRP Trigger: GGGCCGAGGAATCACTGTGTCGCTGCGACGGCTCAAGCACTTTGACTGCAAGGAAAAGCACGCACTGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | GCCCAGCTGAGGAAACCTGGTCCCCAGGACGTCCTGTaGGATAGACTTGCGCACAGGGTAGCTGATATCAGC | + |
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Preference number: 6 (lower is better) Translates to: AQLRKPGPQDVL*DRLAHRVADIS Trigger: GCTGATATCAGCTACCCTGTGCGCAAGTCTATCCAACAGGACGTCCTGGGGACCAGGTTTCCTCAGCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | TCTCTGAGAGGCCTGTCTTGGGGCCCACTTGGCACCTaGGATGATCTTCTAATGCAGACGACGGCAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLRGLSWGPLGT*DDLLMQTTATG Trigger: GCCTGTTGCCGTCGTCTGCATTAGAAGATCATCTCAGGTGCCAAGTGGGCCCCAAGACAGGCCTCTCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS GCA 72 bp | ATCCACCGCCTCCACCGCGGAAATGGCACAGATGATTaGCTCGGGCAGCAGCACATCCAAGATGAAGCGAAT | + |
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Preference number: 6 (lower is better) Translates to: IHRLHRGNGTDD*LGQQHIQDEAN Trigger: ATTCGCTTCATCTTGGATGTGCTGCTGCCCGAGGCAATCATCTGTGCCATTTCCGCGGTGGAGGCGGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | GGTGAAGCCAGGGCCACACAGCTGGATGCCTGTCCCTaGCTCTTTAAGACACTTTCTCCCTTGGAAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GEARATQLDACP*LFKTLSPLERP Trigger: TGGCCTTTCCAAGGGAGAAAGTGTCTTAAAGAGCCAGGGACAGGCATCCAGCTGTGTGGCCCTGGCTTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | CCTCTGCTTCTCTCAGAGGCCGAGAGTGGCCTGATGTaGCCTGATGACTTGACCCAGTCACAGCCTTTGACC | + |
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Preference number: 6 (lower is better) Translates to: PLLLSEAESGLM*PDDLTQSQPLT Trigger: GGTCAAAGGCTGTGACTGGGTCAAGTCATCAGGCAACATCAGGCCACTCTCGGCCTCTGAGAGAAGCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | GAAACACACCAGCCAATGGCCTGGGCAAAGTCCTCCTaGGCTCTGTCCAGCAGTGCGTGCTTTTCCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ETHQPMAWAKSS*ALSSSACFSLQ Trigger: CTGCAAGGAAAAGCACGCACTGCTGGACAGAGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | TCCTCCTCTTCCTCCTCCTCCTCCTCCAGCAGGGAGTGTGTGGACTaGAACCCTGTGGATTCTTCTGAGGACACAGGATCTTCCTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSSSSSSSRECVD*NPVDSSEDTGSSSG Trigger: ACCAGAGGAAGATCCTGTGTCCTCAGAAGAATCCACAGGGTTCAAGTCCACACACTCCCTGCTGGAGGAGGAGGAGGAGGAAGAGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | TCCTGCCCATGGTCCAGCTGTAACCCAGAATCATCCTaGGACTTGTCTCCAGCTCCACTCTCTGAGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SCPWSSCNPESS*DLSPAPLSERP Trigger: AGGCCTCTCAGAGAGTGGAGCTGGAGACAAGTCTCAGGATGATTCTGGGTTACAGCTGGACCATGGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS TCA 72 bp | CCTCCTCCTCCTCCTCCAGCAGGGAGTGTGTGGACTTaGACCCTGTGGATTCTTCTGAGGACACAGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: PPPPPPAGSVWT*TLWILLRTQDL Trigger: AAGATCCTGTGTCCTCAGAAGAATCCACAGGGTTCAAGTCCACACACTCCCTGCTGGAGGAGGAGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | TCATCCTCCAGGTATGTCTCCATGCAAGTCACGCACTaGCTGGAGCTCAGGAACGTCTTCAGCCAGCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSSRYVSMQVTH*LELRNVFSQRE Trigger: CTCACGCTGGCTGAAGACGTTCCTGAGCTCCAGTCAGTGCGTGACTTGCATGGAGACATACCTGGAGGATGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | AAACACACCAGCCAATGGCCTGGGCAAAGTCCTCCTTaGCTCTGTCCAGCAGTGCGTGCTTTTCCTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: KHTSQWPGQSPP*LCPAVRAFPCS Trigger: ACTGCAAGGAAAAGCACGCACTGCTGGACAGAGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | GATGCCTGTCCCTGGCTCTTTAAGACACTTTCTCCCTaGGAAAGGCCAGACTCTGATCTTCGGCGCCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: DACPWLFKTLSP*ERPDSDLRRRV Trigger: TACCCGGCGCCGAAGATCAGAGTCTGGCCTTTCCAAGGGAGAAAGTGTCTTAAAGAGCCAGGGACAGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | GTGGATTCTTCTGAGGACACAGGATCTTCCTCTGGTTaGTCACCCGCTCCAGCACTGCACAGCATCGTGACC | + |
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Preference number: 6 (lower is better) Translates to: VDSSEDTGSSSG*SPAPALHSIVT Trigger: GGTCACGATGCTGTGCAGTGCTGGAGCGGGTGACAAACCAGAGGAAGATCCTGTGTCCTCAGAAGAATCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | ACACAGCTGGATGCCTGTCCCTGGCTCTTTAAGACACTTTCTCCCTaGGAAAGGCCAGACTCTGATCTTCGGCGCCGGGTAGGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TQLDACPWLFKTLSP*ERPDSDLRRRVGFS Trigger: AGAGAAACCTACCCGGCGCCGAAGATCAGAGTCTGGCCTTTCCAAGGGAGAAAGTGTCTTAAAGAGCCAGGGACAGGCATCCAGCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | TTGAACCCTGTGGATTCTTCTGAGGACACAGGATCTTCCTCTGGTTaGTCACCCGCTCCAGCACTGCACAGCATCGTGACCTCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LNPVDSSEDTGSSSG*SPAPALHSIVTSPE Trigger: TTCTGGGGAGGTCACGATGCTGTGCAGTGCTGGAGCGGGTGACAAACCAGAGGAAGATCCTGTGTCCTCAGAAGAATCCACAGGGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 90 bp | GTGATGAGTGAAACACACCAGCCAATGGCCTGGGCAAAGTCCTCCTaGGCTCTGTCCAGCAGTGCGTGCTTTTCCTTGCAGTCAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: VMSETHQPMAWAKSS*ALSSSACFSLQSKC Trigger: GCACTTTGACTGCAAGGAAAAGCACGCACTGCTGGACAGAGCCAAGGAGGACTTTGCCCAGGCCATTGGCTGGTGTGTTTCACTCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | GTTCTCAATGTGCGACTTCTGCAGGGCCTCCACGGCTaGGCTCTTAACCTGGATCTTTTCCTTCAGCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VLNVRLLQGLHG*ALNLDLFLQRE Trigger: CTCTCGCTGAAGGAAAAGATCCAGGTTAAGAGCTCAGCCGTGGAGGCCCTGCAGAAGTCGCACATTGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS TCA 72 bp | GAGAGGCCTGTCTTGGGGCCCACTTGGCACCTGAGATaGTCTTCTAATGCAGACGACGGCAACAGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: ERPVLGPTWHLR*SSNADDGNRLF Trigger: AAAAAGCCTGTTGCCGTCGTCTGCATTAGAAGATCATCTCAGGTGCCAAGTGGGCCCCAAGACAGGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CCA 72 bp | GACCATCTTCACCGAGGAGAGATGGAGAAGGAGCACTaGAGACCTGCGAGGCCACATCTGCATCTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DHLHRGEMEKEH*RPARPHLHLFS Trigger: AGAAAACAGATGCAGATGTGGCCTCGCAGGTCTCCAGTGCTCCTTCTCCATCTCTCCTCGGTGAAGATGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CAA 72 bp | AGCGACACAGTGATTCCTCGGCCCTTGGGGTTCATGTaGCCCTCAATGAAGAGCACACTGGCCTTCTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SDTVIPRPLGFM*PSMKSTLAFLS Trigger: AGACAAGAAGGCCAGTGTGCTCTTCATTGAGGGCAACATGAACCCCAAGGGCCGAGGAATCACTGTGTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | CAGACCAGCATTCCTACTTCAAATGACCGTGGTTCGTaGTACAGAAGGATCCGAGGTGGTTCCTCCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QTSIPTSNDRGS*YRRIRGGSSSS Trigger: GGAAGAGGAGGAACCACCTCGGATCCTTCTGTATCACGAACCACGGTCATTTGAAGTAGGAATGCTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS TCA 72 bp | GCACACTGGCCTTCTTGTCTCTTCGCCGGACACTCTTaGCCACAGCTGGCCAGAATGGGTATTTTTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: AHWPSCLFAGHS*PQLARMGIFGI Trigger: AATACCAAAAATACCCATTCTGGCCAGCTGTGGTCAAGAGTGTCCGGCGAAGAGACAAGAAGGCCAGTGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | AGCACACTGGCCTTCTTGTCTCTTCGCCGGACACTCTaGACCACAGCTGGCCAGAATGGGTATTTTTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: STLAFLSLRRTL*TTAGQNGYFWY Trigger: ATACCAAAAATACCCATTCTGGCCAGCTGTGGTCAAGAGTGTCCGGCGAAGAGACAAGAAGGCCAGTGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CAA 72 bp | GATGATCTTCTAATGCAGACGACGGCAACAGGCTTTTaGAACTGTACTCCGACCTCCTCTTGGATGCGCACT | + |
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Preference number: 6 (lower is better) Translates to: DDLLMQTTATGF*NCTPTSSWMRT Trigger: AGTGCGCATCCAAGAGGAGGTCGGAGTACAGTTCAAAAAGCCTGTTGCCGTCGTCTGCATTAGAAGATCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS CAA 90 bp | TCAATGAAGAGCACACTGGCCTTCTTGTCTCTTCGCCGGACACTCTaGACCACAGCTGGCCAGAATGGGTATTTTTGGTATTTAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SMKSTLAFLSLRRTL*TTAGQNGYFWYLSQ Trigger: CTGGCTTAAATACCAAAAATACCCATTCTGGCCAGCTGTGGTCAAGAGTGTCCGGCGAAGAGACAAGAAGGCCAGTGTGCTCTTCATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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| CDS CCA 72 bp | TCCCATCTTCTATTGGATGACTTTCAGGACTCAAACTaGTCCTCTCATTCAAGACATCCAGGGCCACTCGCA | + |
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Preference number: 6 (lower is better) Translates to: SHLLLDDFQDSN*SSHSRHPGPLA Trigger: TGCGAGTGGCCCTGGATGTCTTGAATGAGAGGACCAGTTTGAGTCCTGAAAGTCATCCAATAGAAGATGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020365.15 ENSMUST00000130260.2 |
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| CDS TCA 72 bp | TTGGTATTTAAGCCAGACCAGCATTCCTACTTCAAATaGCCGTGGTTCGTGATACAGAAGGATCCGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LVFKPDQHSYFK*PWFVIQKDPRW Trigger: CCACCTCGGATCCTTCTGTATCACGAACCACGGTCATTTGAAGTAGGAATGCTGGTCTGGCTTAAATACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020365.15 |
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