Pregenerated sensors for PWWP2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044950Ensembl transcript IDs: ENSMUST00000061070.6, ENSMUST00000094294.5, ENSMUST00000109280.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAATTTCTCACCAGTTTGGCCAAGCTAGCTGGTGGAAATGATTCCTaGCTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACC | + |
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Preference number: 1 (lower is better) Translates to: QFLTSLAKLAGGNDS*LARDLQQLQWFSPT Trigger: GGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAGTCAGGAATCATTTCCACCAGCTAGCTTGGCCAAACTGGTGAGAAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR TCA 90 bp | CTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGTGGAAATaGTTCCTGACTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSAISHQFGQASWWK*FLTSQGPAAAPVVL Trigger: GAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAGTCAGGAATCATTTCCACCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR GCA 90 bp | TATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATaGAACCCATGTCACATGGTGACAGACAATAGTTTATACATGTGG | + |
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Preference number: 1 (lower is better) Translates to: YPLFPKFQPLLKSQI*NPCHMVTDNSLYMW Trigger: CCACATGTATAAACTATTGTCTGTCACCATGTGACATGGGTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR GCA 90 bp | TCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTTTTAGTCACTaGCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCTTA | + |
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Preference number: 1 (lower is better) Translates to: STLQLPLCRLTGFSH*LYIYFLVQFKAPIL Trigger: TAAGATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| 3UTR-3UTR TCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACGGTGGAAATGATTCCTaGCTAGCCAGGGACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: EYPLFPKFQPLLKSQICNGGNDS*LARDLQ Trigger: CTGCAGGTCCCTGGCTAGTCAGGAATCATTTCCACC...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR GCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACAAAAAGCCAACTGAGTaGAATTTCTCACCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: EYPLFPKFQPLLKSQICNKKPTE*NFSPVW Trigger: CCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACCTAAAATCTCAAATATaGAACCCATGTCACATGGTG | + |
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Preference number: 2 (lower is better) Translates to: HQISDSLFYNLTGQESTDLKSQI*NPCHMV Trigger: CACCATGTGACATGGGTTGCATATTTGAGATTTTAG...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACAACAATAGCTACAAATaGCAATTAACAGTCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: EYPLFPKFQPLLKSQICNNNSYK*QLTVPA Trigger: TGCAGGGACTGTTAATTGCCATTTGTAGCTATTGTT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGACCCATGTCACATGGTaGCAGACAATAGTTTATACA | + |
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Preference number: 2 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLTHVTW*QTIVYT Trigger: TGTATAAACTATTGTCTGTCACCATGTGACATGGGT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGAAAAAGCCAACTGAGTaGAATTTCTCACCAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLKKPTE*NFSPVW Trigger: CCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGAACAATAGCTACAAATaGCAATTAACAGTCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLNNSYK*QLTVPA Trigger: TGCAGGGACTGTTAATTGCCATTTGTAGCTATTGTT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR TCA 72 bp | ACCAGTTTGGCCAAGCTAGCTGGTGGAAATGATTCCTaGCTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: TSLAKLAGGNDS*LARDLQQLQWF Trigger: GAACCACTGGAGCTGCTGCAGGTCCCTGGCTAGTCAGGAATCATTTCCACCAGCTAGCTTGGCCAAACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR TCA 72 bp | ATTTCTCACCAGTTTGGCCAAGCTAGCTGGTGGAAATaGTTCCTGACTAGCCAGGGACCTGCAGCAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: ISHQFGQASWWK*FLTSQGPAAAP Trigger: TGGAGCTGCTGCAGGTCCCTGGCTAGTCAGGAATCATTTCCACCAGCTAGCTTGGCCAAACTGGTGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR TCA 72 bp | CCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTaGCTGGTTTTAGTCACTGCCTTTACATTTACTTCT | + |
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Preference number: 3 (lower is better) Translates to: PFSLPCNCPCVD*LVLVTAFTFTS Trigger: AGAAGTAAATGTAAAGGCAGTGACTAAAACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| 3UTR-3UTR CAA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACCAGTCCCTGCAAAAATaGTTTCATTTGAAGCTATGG | + |
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Preference number: 3 (lower is better) Translates to: HQISDSLFYNLTGQESTDQSLQK*FHLKLW Trigger: CCATAGCTTCAAATGAAACAATTTTTGCAGGGACTG...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGCAGTCCCTGCAAAAATaGTTTCATTTGAAGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLQSLQK*FHLKLW Trigger: CCATAGCTTCAAATGAAACAATTTTTGCAGGGACTG...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR CCA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGCACCTGCTGAGCGGGTaGAGGTGCATCGAGACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LARDLQQLQWFSPTLLSMHLLSG*RCIETA Trigger: CGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTG...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGTGGAGATGCAAACCATaGGATACGGGCCTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: LARDLQQLQWFSPTLLSMWRCKP*DTGLLP Trigger: CGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCA...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR GCA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGATCCGCAGTTCCTCCTaGTCACCAGGCACACGCACT | + |
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Preference number: 4 (lower is better) Translates to: LARDLQQLQWFSPTLLSMIRSSS*SPGTRT Trigger: AGTGCGTGTGCCTGGTGAGCAGGAGGAACTGCGGAT...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR GCA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGCAGGCACACGCACTCTaGTTGTGTCCTGAACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LARDLQQLQWFSPTLLSMQAHAL*LCPEPH Trigger: GTGAGGTTCAGGACACAAGCAGAGTGCGTGTGCCTG...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGAGGGGCCTCACCTGCTaGGCGGGTGGAGGTGCATCG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWRGLTC*AGGGAS Trigger: CGATGCACCTCCACCCGCTCAGCAGGTGAGGCCCCT...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR GCA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGTTATCACACAGGACTTaGCTGGGCCGTAGCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: LARDLQQLQWFSPTLLSMLSHRT*LGRSLI Trigger: GATTAAGCTACGGCCCAGGCAAGTCCTGTGTGATAA...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR CCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGCACCTGCTGAGCGGGTaGAGGTGCATCGAGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWHLLSG*RCIETA Trigger: CGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTG...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGGGGTGGGAGAGAACCTaGGCTGGGACTCTGATACCG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWGWERT*AGTLIP Trigger: CGGTATCAGAGTCCCAGCTCAGGTTCTCTCCCACCC...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACAGGGGCCTCACCTGCTaGGCGGGTGGAGGTGCATCG | + |
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Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNRGLTC*AGGGAS Trigger: CGATGCACCTCCACCCGCTCAGCAGGTGAGGCCCCT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGCCTGAGCTGGGACTCTaGTACCGACGTGTGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWPELGL*YRRVKW Trigger: CCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGG...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTGGGTGGGAGAGAACCTaGGCTGGGACTCTGATACCG | + |
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Preference number: 4 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGGWERT*AGTLIP Trigger: CGGTATCAGAGTCCCAGCTCAGGTTCTCTCCCACCC...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGTGGAGATGCAAACCATaGGATACGGGCCTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWWRCKP*DTGLLP Trigger: CGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCA...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACCTTCGCTGCCGGGAATaGGCTCTAGCTCCGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNLRCRE*ALAPAR Trigger: CCGAGCCGGAGCTAGAGCCCATTCCCGGCAGCGAAG...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
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| CDS-3UTR CCA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTATGGAAGAGAGGAGGTaGCTTGGAAGCCCACAGGCG | + |
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Preference number: 4 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGMEERR*LGSPQA Trigger: CGCCTGTGGGCTTCCAAGCCACCTCCTCTCTTCCAT...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS-3UTR CCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGGGAGAGAACCTGAGCTaGGACTCTGATACCGACGTG | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWGENLS*DSDTDV Trigger: CACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCC...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR CCA 90 bp | TATTCCCTAATAACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGACCTGCTGAGCGGGTaGAGGTGCATCGAGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: YSLITFLPFSLPCNCPCVDLLSG*RCIETA Trigger: CGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTC...TACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTTATTAGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS-3UTR TCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACGGGTGGGAGAGAACCTaGGCTGGGACTCTGATACCG | + |
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Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDGWERT*AGTLIP Trigger: CGGTATCAGAGTCCCAGCTCAGGTTCTCTCCCACCC...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR CCA 90 bp | AGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACATCCGCGTCCTCGATGATGTaGTCCAGCGTGACCCGCACC | + |
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Preference number: 4 (lower is better) Translates to: SLKLQSYSVLLFCCSVTSASSMM*SSVTRT Trigger: GGTGCGGGTCACGCTGGACCACATCATCGAGGACGC...GGATGTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS-3UTR CCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGGTCACAGGGATCCCATaGGGCCCAAACCTTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWVTGIP*GPNLLD Trigger: ATCCAAAAGGTTTGGGCCCCATGGGATCCCTGTGAC...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
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| CDS-3UTR CCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACAGAGAGGAGGTGGCTTaGAAGCCCACAGGCGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDREEVA*KPTGAQ Trigger: CTGAGCGCCTGTGGGCTTCCAAGCCACCTCCTCTCT...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
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| CDS-3UTR CCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGGGTAAGAATACGGGCTaGCCACCAAGGGAAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWGKNTG*PPREAI Trigger: TATGGCTTCCCTTGGTGGCCAGCCCGTATTCTTACC...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGTTCCGAGGCGGCGGCTaGGGTATTGATTGGTTATAT | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWFRGGG*GIDWLY Trigger: ATATAACCAATCAATACCTCAGCCGCCGCCTCGGAA...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
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| CDS-3UTR TCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACCCTGAGCTGGGACTCTaGTACCGACGTGTGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDPELGL*YRRVKW Trigger: CCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGG...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACACTCTGCTTGTGTCCTaGACCTCACCGGCGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDTLLVS*TSPADS Trigger: AGAGTCCGCCGGTGAGGTTCAGGACACAAGCAGAGT...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACACTCTGCTTGTGTCCTaGACCTCACCGGCGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNTLLVS*TSPADS Trigger: AGAGTCCGCCGGTGAGGTTCAGGACACAAGCAGAGT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGAAAGGGGGAGAGTTGTaGGAGAGCAAGGGAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWKGGEL*ESKGRC Trigger: ACATCTTCCCTTGCTCTCTCACAACTCTCCCCCTTT...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR GCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACGAGATACGGGCCTCCTaGCGGGCTAAAAGGCCGTTA | + |
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Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNEIRAS*RAKRPL Trigger: TAACGGCCTTTTAGCCCGGCAGGAGGCCCGTATCTC...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS-3UTR GCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACGAGATACGGGCCTCCTaGCGGGCTAAAAGGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDEIRAS*RAKRPL Trigger: TAACGGCCTTTTAGCCCGGCAGGAGGCCCGTATCTC...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCTTATTCCTTCGCTGCCGGGAATaGGCTCTAGCTCCGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCLYIYFLVQFKAPILFLRCRE*ALAPAR Trigger: CCGAGCCGGAGCTAGAGCCCATTCCCGGCAGCGAAG...GAATAAGATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACCAGGCACACGCACTCTaGTTGTGTCCTGAACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDQAHAL*LCPEPH Trigger: GTGAGGTTCAGGACACAAGCAGAGTGCGTGTGCCTG...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR GCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGCATCCATGCTATCAATaGTACACACTGAGGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWHPCYQ*YTLRHW Trigger: CCAGTGCCTCAGTGTGTAGCATTGATAGCATGGATG...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR GCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACACTTCAGGGGTCAGCTaGTTAGCAGCCTTAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNTSGVS*LAALAA Trigger: GGCTGCTAAGGCTGCTAAGCAGCTGACCCCTGAAGT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGCGTCCTCGATGATGTaGTCCAGCGTGACCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLASSMM*SSVTRT Trigger: GGTGCGGGTCACGCTGGACCACATCATCGAGGACGC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CCA 90 bp | ACTGGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAAGAGAGGAGGTGGCTTaGAAGCCCACAGGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGFSHCLYIYFLVQFKAPREEVA*KPTGAQ Trigger: CTGAGCGCCTGTGGGCTTCCAAGCCACCTCCTCTCT...TGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACGGAGAGAACCTGAGCTaGGACTCTGATACCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNGENLS*DSDTDV Trigger: CACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCC...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACTGCCCCTGTGTAGATTGACTGGTTTTAGTCACTGCCTTTACATTTACCGGCGGCTGAGGTATTaGTTGGTTATATGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLPLCRLTGFSHCLYIYRRLRY*LVICVP Trigger: AGGGACACATATAACCAATCAATACCTCAGCCGCCG...GTAAATGTAAAGGCAGTGACTAAAACCAGTCAATCTACACAGGGGCAGTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR TCA 90 bp | ACTGGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCACCTGAGCTGGGACTCTaGTACCGACGTGTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGFSHCLYIYFLVQFKAPPELGL*YRRVKW Trigger: CCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGG...TGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACTCAATGCTCCCAGCCTaGATCCACAGTGGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQFKAPILFSPVVLLFCHSMLPA*IHSGLS Trigger: TGACAGACCACTGTGGATTCAGGCTGGGAGCATTGA...GTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGGAAGAGGCAGAAGGTaGGTGCATACAGCCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLGRGRR*VHTAGR Trigger: CCTCCCGGCTGTATGCACGCACCTTCTGCCTCTTCC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTTACTTTGGAGCTGCATaGCGTCCGGTTTGTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGYFGAA*RPVCPY Trigger: ATAAGGACAAACCGGACGCCATGCAGCTCCAAAGTA...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCCTCAGGAGGAGGGACTaGAGAGAGGTCATCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFSHCLYIYFLVQFKAPILRRRD*REVIGN Trigger: GTTCCCGATGACCTCTCTCCAGTCCCTCCTCCTGAG...GATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACGGTAAGAATACGGGCTaGCCACCAAGGGAAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDGKNTG*PPREAI Trigger: TATGGCTTCCCTTGGTGGCCAGCCCGTATTCTTACC...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR TCA 90 bp | TATTCCCTAATAACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTATTCCGAGGCGGCGGCTaGGGTATTGATTGGTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: YSLITFLPFSLPCNCPCVFRGGG*GIDWLY Trigger: ATATAACCAATCAATACCTCAGCCGCCGCCTCGGAA...TACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTTATTAGGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR TCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACAAAGGGGGAGAGTTGTaGGAGAGCAAGGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNKGGEL*ESKGRC Trigger: ACATCTTCCCTTGCTCTCTCACAACTCTCCCCCTTT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR TCA 90 bp | AGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCTTATTCTTTGTTGAGACCTGCTaGGCGGGTGGAGGTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SHCLYIYFLVQFKAPILFFVETC*AGGGAS Trigger: CGATGCACCTCCACCCGCTCAGCAGGTCTCAACAAA...GAATAAGATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGATCCGCAGTTCCTCCTaGTCACCAGGCACACGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLIRSSS*SPGTRT Trigger: AGTGCGTGTGCCTGGTGAGCAGGAGGAACTGCGGAT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGCTCAGGAGGAGGGACTaGAGAGAGGTCATCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLLRRRD*REVIGN Trigger: GTTCCCGATGACCTCTCTCCAGTCCCTCCTCCTGAG...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGATGGAAGAGAGGAGGTaGCTTGGAAGCCCACAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLMEERR*LGSPQA Trigger: CGCCTGTGGGCTTCCAAGCCACCTCCTCTCTTCCAT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CCA 90 bp | GGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCGGAGAGAACCTGAGCTaGGACTCTGATACCGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSHCLYIYFLVQFKAPIGENLS*DSDTDV Trigger: CACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCC...GATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR TCA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGTTTGATGTATTTGCCTaGGCAGAAACCTTGACTACT | + |
|
Preference number: 4 (lower is better) Translates to: RIKSQLSAISHQFGQASWFDVFA*AETLTT Trigger: AGTAGTCAAGGTTTCTGCTCAGGCAAATACATCAAA...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR TCA 90 bp | TATTCCCTAATAACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGGACTCGTCACTGTCTaGTGTAATAGCTGCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLITFLPFSLPCNCPCVGLVTV*CNSCHL Trigger: CAAATGGCAGCTATTACATCAGACAGTGACGAGTCC...TACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTTATTAGGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACTTATCACACAGGACTTaGCTGGGCCGTAGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNLSHRT*LGRSLI Trigger: GATTAAGCTACGGCCCAGGCAAGTCCTGTGTGATAA...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR GCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGACTTCAGGGGTCAGCTaGTTAGCAGCCTTAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLTSGVS*LAALAA Trigger: GGCTGCTAAGGCTGCTAAGCAGCTGACCCCTGAAGT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACGAGCAAGGGAAGATGTaGTTGGAGATGCAAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNEQGKM*LEMQTM Trigger: CATGGTTTGCATCTCCAACCACATCTTCCCTTGCTC...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACAGCCTGAATCCACAGTaGTCTGTCAGACACTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VQFKAPILFSPVVLLFCHSLNPQ*SVRHCK Trigger: CTTACAGTGTCTGACAGACCACTGTGGATTCAGGCT...GTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| 3UTR CAA 72 bp | TCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATaGACTGGTTTTAGTCACTGCCTTTACATTTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIQSTLQLPLCR*TGFSHCLYIYF Trigger: GAAGTAAATGTAAAGGCAGTGACTAAAACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACAGATACTGCTTTTGCTaGCCTTTTTGCCCAACATCC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNRYCFC*PFCPTS Trigger: GGATGTTGGGCAAAAAGGGCAGCAAAAGCAGTATCT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACGGAAGCCATATATCTTaGCCCAAACAATGTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNGSHIS*PKQCPL Trigger: TAGGGGACATTGTTTGGGCCAAGATATATGGCTTCC...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR TCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGCGGCGGCTGAGGTATTaGTTGGTTATATGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLRRLRY*LVICVP Trigger: AGGGACACATATAACCAATCAATACCTCAGCCGCCG...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR GCA 90 bp | ACTGGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCATTATCACACAGGACTTaGCTGGGCCGTAGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: TGFSHCLYIYFLVQFKAPLSHRT*LGRSLI Trigger: GATTAAGCTACGGCCCAGGCAAGTCCTGTGTGATAA...TGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACACTTCTATCCCTTCTTaGAATGTGGTACTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNTSIPS*NVVLWS Trigger: GCTCCAAAGTACCACATTCCAAGAAGGGATAGAAGT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR GCA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTACTTTGCTTCTTCTGTaGCTTTTCTTTGGCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGTLLLL*LFFGNF Trigger: AAAATTGCCAAAGAAAAGGCACAGAAGAAGCAAAGT...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGTACTTTGGAGCTGCATaGCGTCCGGTTTGTCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLYFGAA*RPVCPY Trigger: ATAAGGACAAACCGGACGCCATGCAGCTCCAAAGTA...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACACAGTGTTCCTTCTCTaGCTTTCGTTTTGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNTVFLL*LSFWFF Trigger: GAAAAACCAAAACGAAAGCCAGAGAAGGAACACTGT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | TATTCCCTAATAACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAACAGTGTTCCTTCTCTaGCTTTCGTTTTGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLITFLPFSLPCNCPCVTVFLL*LSFWFF Trigger: GAAAAACCAAAACGAAAGCCAGAGAAGGAACACTGT...TACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTTATTAGGGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACACAGTGTTCCTTCTCTaGCTTTCGTTTTGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDTVFLL*LSFWFF Trigger: GAAAAACCAAAACGAAAGCCAGAGAAGGAACACTGT...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGAGCAAGGGAAGATGTaGTTGGAGATGCAAACCATG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLEQGKM*LEMQTM Trigger: CATGGTTTGCATCTCCAACCACATCTTCCCTTGCTC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCACTTCTATCCCTTCTTaGAATGTGGTACTTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSHCLYIYFLVQFKAPITSIPS*NVVLWS Trigger: GCTCCAAAGTACCACATTCCAAGAAGGGATAGAAGT...GATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACTCCATGTTCTTGCTTTaGAGCACTTTCTTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HQISDSLFYNLTGQESTDSMFLL*STFLVF Trigger: AAATACCAAGAAAGTGCTCCAAAGCAAGAACATGGA...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | GTGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACTCCATGTTCTTGCTTTaGAGCACTTTCTTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VQFKAPILFSPVVLLFCHSMFLL*STFLVF Trigger: AAATACCAAGAAAGTGCTCCAAAGCAAGAACATGGA...GTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACCATTCATTATTGAAGTaGGTTCTTCCCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNHSLLK*VLPCTF Trigger: AAATGTACAGGGAAGAACCCACTTCAATAATGAATG...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CCA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACTTATTAAACCGTAACTaGAAGTTTTCTAGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EYPLFPKFQPLLKSQICNLLNRN*KFSRKG Trigger: CCCCTTTCTAGAAAACTTCCAGTTACGGTTTAATAA...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACACATTCATTATTGAAGTaGGTTCTTCCCTGTACATTT | + |
|
Preference number: 4 (lower is better) Translates to: CSLKLQSYSVLLFCCSVTHSLLK*VLPCTF Trigger: AAATGTACAGGGAAGAACCCACTTCAATAATGAATG...TGTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR GCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGACTTTGCTTCTTCTGTaGCTTTTCTTTGGCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLTLLLL*LFFGNF Trigger: AAAATTGCCAAAGAAAAGGCACAGAAGAAGCAAAGT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CCA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGTTATTAAACCGTAACTaGAAGTTTTCTAGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLLLNRN*KFSRKG Trigger: CCCCTTTCTAGAAAACTTCCAGTTACGGTTTAATAA...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS GCA 90 bp | TCTGAAGGGGCCTCACCTGCTGAGCGGGTGGAGGTGCATCGAGACTaGGGCTTAGGCGCCAGCTTGCCACTCCGAATTTTCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEGASPAERVEVHRD*GLGASLPLRIFSSP Trigger: GGGACTGGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTGAGGCCCCTTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS GCA 90 bp | TGCCATTTGTTGAGACCTGCTGAGCGGGTGGAGGTGCATCGAGACTaGGGCTTAGGCGCCAGCTTGCCACTCCGAATTTTCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CHLLRPAERVEVHRD*GLGASLPLRIFSSP Trigger: GGGACTGGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTCTCAACAAATGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS TCA 90 bp | CTCGGGGTGGGAGAGAACCTGAGCTGGGACTCTGATACCGACGTGTaGAGTGGACTTTCGCATGGGCGGTTTTGGAAGTGGAGGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGVGENLSWDSDTDV*SGLSHGRFWKWRFH Trigger: GTGAAACCTCCACTTCCAAAACCGCCCATGCGAAAGTCCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCCCACCCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
||
| CDS TCA 90 bp | GCCTTTGTGCTGCCCGCTTCACTGTTAACTTCAATGCTCCCAGCCTaGATCCACAGTGGTCTGTCAGACACTGTAAGGGAGCAGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFVLPASLLTSMLPA*IHSGLSDTVREQQD Trigger: GTCCTGCTGCTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGGCTGGGAGCATTGAAGTTAACAGTGAAGCGGGCAGCACAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS CCA 90 bp | GCCCGCTTCACTGTTAACTTCAATGCTCCCAGCCTGAATCCACAGTaGTCTGTCAGACACTGTAAGGGAGCAGCAGGACTCGTCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARFTVNFNAPSLNPQ*SVRHCKGAAGLVTV Trigger: GACAGTGACGAGTCCTGCTGCTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGGCTGGGAGCATTGAAGTTAACAGTGAAGCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGGACTTCTATCCCTTCTaGGAATGTGGTACTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LARDLQQLQWFSPTLLSMDFYPF*ECGTLE Trigger: CTCCAAAGTACCACATTCCAAGAAGGGATAGAAGTC...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CAA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGAGTGGAGGTTTCACTTaGCTTCTTCTGTGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LARDLQQLQWFSPTLLSMSGGFT*LLLCLF Trigger: GAAAAGGCACAGAAGAAGCAAAGTGAAACCTCCACT...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS GCA 90 bp | AGGGAAGATGTGGTTGGAGATGCAAACCATGAGATACGGGCCTCCTaGCGGGCTAAAAGGCCGTTATCTTTCCGGCTTACAGTGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: REDVVGDANHEIRAS*RAKRPLSFRLTVMV Trigger: TACCATCACTGTAAGCCGGAAAGATAACGGCCTTTTAGCCCGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCAACCACATCTTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS GCA 90 bp | CACGTTTCAAATTGTGTCAACAAAGCCCGCACTTCAGGGGTCAGCTaGTTAGCAGCCTTAGCAGCCTCTGTGATAGCCCTGCGATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVSNCVNKARTSGVS*LAALAASVIALRYR Trigger: TCTGTATCGCAGGGCTATCACAGAGGCTGCTAAGGCTGCTAAGCAGCTGACCCCTGAAGTGCGGGCTTTGTTGACACAATTTGAAACGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS CCA 90 bp | AGTTTTCTAGAAAGGGGGAGAGTTGTGAGAGAGCAAGGGAAGATGTaGTTGGAGATGCAAACCATGAGATACGGGCCTCCTGCCGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SFLERGRVVREQGKM*LEMQTMRYGPPAGL Trigger: TAGCCCGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCAACCACATCTTCCCTTGCTCTCTCACAACTCTCCCCCTTTCTAGAAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS CCA 90 bp | TCGGGAACAGCACCGTTCACTTCCTGCTTGACTTCTATCCCTTCTTaGAATGTGGTACTTTGGAGCTGCATGGCGTCCGGTTTGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SGTAPFTSCLTSIPS*NVVLWSCMASGLSL Trigger: TAAGGACAAACCGGACGCCATGCAGCTCCAAAGTACCACATTCCAAGAAGGGATAGAAGTCAAGCAGGAAGTGAACGGTGCTGTTCCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | CTAGCCAGGGACCTGCAGCAGCTCCAGTGGTTCTCGCCTACCTTACTGTCCATGCTGTACATTTTTCGTTaGGGTCGCTTAATTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LARDLQQLQWFSPTLLSMLYIFR*GRLIFR Trigger: TCGGAAAATTAAGCGACCCAAACGAAAAATGTACAG...CATGGACAGTAAGGTAGGCGAGAACCACTGGAGCTGCTGCAGGTCCCTGGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS GCA 90 bp | ATGTCTCCTGATTTAGGGTCAGGTAAACAGAGATACTGCTTTTGCTaGCCTTTTTGCCCAACATCCGCAGTTCCTCCTGCTCACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSPDLGSGKQRYCFC*PFCPTSAVPPAHQA Trigger: TGCCTGGTGAGCAGGAGGAACTGCGGATGTTGGGCAAAAAGGGCAGCAAAAGCAGTATCTCTGTTTACCTGACCCTAAATCAGGAGACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | TTGCAACTGCCCCTGTGTAGATTGACTGGTTTTAGTCACTGCCTTTACATTTACGGCTTAGGCGCCAGCTaGCCACTCCGAATTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLPLCRLTGFSHCLYIYGLGAS*PLRIFS Trigger: GGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCC...GTAAATGTAAAGGCAGTGACTAAAACCAGTCAATCTACACAGGGGCAGTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | CGTATAAAAAGCCAACTGAGTGCAATTTCTCACCAGTTTGGCCAAGCTAGCTGGCTTTTGCTGCCCTTTTaGCCCAACATCCGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RIKSQLSAISHQFGQASWLLLPF*PNIRSS Trigger: GGAACTGCGGATGTTGGGCAAAAAGGGCAGCAAAAG...CCAGCTAGCTTGGCCAAACTGGTGAGAAATTGCACTCAGTTGGCTTTTTATACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACGGCTTAGGCGCCAGCTaGCCACTCCGAATTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQISDSLFYNLTGQESTDGLGAS*PLRIFS Trigger: GGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCC...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACTGGGGCCCAAACCTTTaGGATAGGTCCATGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: EYPLFPKFQPLLKSQICNWGPNL*DRSMRT Trigger: GGTCCTCATGGACCTATCCAAAAGGTTTGGGCCCCA...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CAA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACTTGGAATGTGGTACTTaGGAGCTGCATGGCGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EYPLFPKFQPLLKSQICNLECGT*ELHGVR Trigger: CCGGACGCCATGCAGCTCCAAAGTACCACATTCCAA...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CAA 90 bp | TGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACATGGGGCCCAAACCTTTaGGATAGGTCCATGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: CSLKLQSYSVLLFCCSVTWGPNL*DRSMRT Trigger: GGTCCTCATGGACCTATCCAAAAGGTTTGGGCCCCA...TGTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTTGCATGGCGTCCGGTTaGTCCTTATATTCCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGCMASG*SLYSLL Trigger: CAAAAGGGAATATAAGGACAAACCGGACGCCATGCA...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTGACTTCTATCCCTTCTaGGAATGTGGTACTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGDFYPF*ECGTLE Trigger: CTCCAAAGTACCACATTCCAAGAAGGGATAGAAGTC...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACATCCGCGGCGGCTGAGGTATaGATTGGTTATATGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKLQSYSVLLFCCSVTSAAAEV*IGYMCP Trigger: GGGACACATATAACCAATCAATACCTCAGCCGCCGC...GGATGTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGGCTTAGGCGCCAGCTaGCCACTCCGAATTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLGLGAS*PLRIFS Trigger: GGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | CACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGACAAGAGAGTACTGACCAAGGGAAGATGTGGTaGGAGATGCAAACCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HQISDSLFYNLTGQESTDQGKMW*EMQTMR Trigger: TCTCATGGTTTGCATCTCCAACCACATCTTCCCTTG...GTCAGTACTCTCTTGTCCAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCAATAGCTGCCATTTGTaGAGACCTGCTGAGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFSHCLYIYFLVQFKAPINSCHL*RPAERV Trigger: CACCCGCTCAGCAGGTCTCAACAAATGGCAGCTATT...GATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | TGCAGTTTAAAGCTCCAATCTTATTCAGTCCTGTTGTTCTGTTGTTCTGTCACATGTAATAGCTGCCATTaGTTGAGACCTGCTGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSLKLQSYSVLLFCCSVTCNSCH*LRPAER Trigger: CCGCTCAGCAGGTCTCAACAAATGGCAGCTATTACA...TGTGACAGAACAACAGAACAACAGGACTGAATAAGATTGGAGCTTTAAACTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGCGGCGGCTGAGGTATaGATTGGTTATATGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLAAAEV*IGYMCP Trigger: GGGACACATATAACCAATCAATACCTCAGCCGCCGC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CAA 90 bp | AACTTTTCTTCCATTCAGTCTACCTTGCAACTGCCCCTGTGTAGATTGACTGGTATCCATGTTCTTGCTTaGGAGCACTTTCTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: NFSSIQSTLQLPLCRLTGIHVLA*EHFLGI Trigger: AATACCAAGAAAGTGCTCCAAAGCAAGAACATGGAT...ACCAGTCAATCTACACAGGGGCAGTTGCAAGGTAGACTGAATGGAAGAAAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGCTTTTGCTGCCCTTTTaGCCCAACATCCGCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLLLLPF*PNIRSS Trigger: GGAACTGCGGATGTTGGGCAAAAAGGGCAGCAAAAG...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGGGGAAGCCATATATCTaGGCCCAAACAATGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLGKPYI*AQTMSP Trigger: AGGGGACATTGTTTGGGCCAAGATATATGGCTTCCC...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGTGCATGGCGTCCGGTTaGTCCTTATATTCCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLCMASG*SLYSLL Trigger: CAAAAGGGAATATAAGGACAAACCGGACGCCATGCA...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061070.6 |
||
| CDS-3UTR CAA 90 bp | GAATATCCACTGTTCCCCAAGTTCCAGCCCTTACTAAAATCTCAAATATGCAACATCCATGTTCTTGCTTaGGAGCACTTTCTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: EYPLFPKFQPLLKSQICNIHVLA*EHFLGI Trigger: AATACCAAGAAAGTGCTCCAAAGCAAGAACATGGAT...GTTGCATATTTGAGATTTTAGTAAGGGCTGGAACTTGGGGAACAGTGGATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGCAAGGGAAGATGTGGTaGGAGATGCAAACCATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLQGKMW*EMQTMR Trigger: TCTCATGGTTTGCATCTCCAACCACATCTTCCCTTG...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGAGTGGAGGTTTCACTTaGCTTCTTCTGTGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLSGGFT*LLLCLF Trigger: GAAAAGGCACAGAAGAAGCAAAGTGAAACCTCCACT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS-3UTR CAA 90 bp | AGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCAATCTTATTCAGTGGAGGTTTCACTTaGCTTCTTCTGTGCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHCLYIYFLVQFKAPILFSGGFT*LLLCLF Trigger: GAAAAGGCACAGAAGAAGCAAAGTGAAACCTCCACT...GAATAAGATTGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | ACTGGTTTTAGTCACTGCCTTTACATTTACTTCTTAGTGCAGTTTAAAGCTCCACTGTACATTTTTCGTTaGGGTCGCTTAATTTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TGFSHCLYIYFLVQFKAPLYIFR*GRLIFR Trigger: TCGGAAAATTAAGCGACCCAAACGAAAAATGTACAG...TGGAGCTTTAAACTGCACTAAGAAGTAAATGTAAAGGCAGTGACTAAAACCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS-3UTR CAA 90 bp | AATCTATCTAAACTTCCCACCAAATATCTGACAGTTTGTTTTACAACCTCACTGATCCATGTTCTTGCTTaGGAGCACTTTCTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: NLSKLPTKYLTVCFTTSLIHVLA*EHFLGI Trigger: AATACCAAGAAAGTGCTCCAAAGCAAGAACATGGAT...CAGTGAGGTTGTAAAACAAACTGTCAGATATTTGGTGGGAAGTTTAGATAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS GCA 72 bp | GCCTCACCTGCTGAGCGGGTGGAGGTGCATCGAGACTaGGGCTTAGGCGCCAGCTTGCCACTCCGAATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASPAERVEVHRD*GLGASLPLRIF Trigger: GAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
||
| CDS CCA 72 bp | GGGAGGGTAAGGTGCTCCTTCATGGAAGAGAGGAGGTaGCTTGGAAGCCCACAGGCGCTCAGGAGGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRVRCSFMEERR*LGSPQALRRRD Trigger: GTCCCTCCTCCTGAGCGCCTGTGGGCTTCCAAGCCACCTCCTCTCTTCCATGAAGGAGCACCTTACCCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 |
||
| CDS TCA 72 bp | CGCACTCGGGGTGGGAGAGAACCTGAGCTGGGACTCTaGTACCGACGTGTGAAGTGGACTTTCGCATGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRGGREPELGL*YRRVKWTFAWA Trigger: CGCCCATGCGAAAGTCCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCCCACCCCGAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
||
| CDS GCA 72 bp | TTGAGACCTGCTGAGCGGGTGGAGGTGCATCGAGACTaGGGCTTAGGCGCCAGCTTGCCACTCCGAATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRPAERVEVHRD*GLGASLPLRIF Trigger: GAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGCAGGTCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
||
| CDS CAA 90 bp | GCTGAGCGGGTGGAGGTGCATCGAGACTGCGGCTTAGGCGCCAGCTaGCCACTCCGAATTTTCTCCAGTCCCGTCTTCAGAGAAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AERVEVHRDCGLGAS*PLRIFSSPVFREES Trigger: TGACTCTTCTCTGAAGACGGGACTGGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCACCCGCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
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| CDS CAA 72 bp | GTGGAGGTGCATCGAGACTGCGGCTTAGGCGCCAGCTaGCCACTCCGAATTTTCTCCAGTCCCGTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VEVHRDCGLGAS*PLRIFSSPVFR Trigger: TCTGAAGACGGGACTGGAGAAAATTCGGAGTGGCAAGCTGGCGCCTAAGCCGCAGTCTCGATGCACCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
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| CDS TCA 72 bp | GGAGAGAACCTGAGCTGGGACTCTGATACCGACGTGTaGAGTGGACTTTCGCATGGGCGGTTTTGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GENLSWDSDTDV*SGLSHGRFWKW Trigger: CCACTTCCAAAACCGCCCATGCGAAAGTCCACTTCACACGTCGGTATCAGAGTCCCAGCTCAGGTTCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
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| CDS GCA 72 bp | GTGGTTGGAGATGCAAACCATGAGATACGGGCCTCCTaGCGGGCTAAAAGGCCGTTATCTTTCCGGCTTACA | + |
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Preference number: 6 (lower is better) Translates to: VVGDANHEIRAS*RAKRPLSFRLT Trigger: TGTAAGCCGGAAAGATAACGGCCTTTTAGCCCGGCAGGAGGCCCGTATCTCATGGTTTGCATCTCCAACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS GCA 72 bp | AATTGTGTCAACAAAGCCCGCACTTCAGGGGTCAGCTaGTTAGCAGCCTTAGCAGCCTCTGTGATAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: NCVNKARTSGVS*LAALAASVIAL Trigger: CAGGGCTATCACAGAGGCTGCTAAGGCTGCTAAGCAGCTGACCCCTGAAGTGCGGGCTTTGTTGACACAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS TCA 72 bp | CTGCCCGCTTCACTGTTAACTTCAATGCTCCCAGCCTaGATCCACAGTGGTCTGTCAGACACTGTAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LPASLLTSMLPA*IHSGLSDTVRE Trigger: CTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGGCTGGGAGCATTGAAGTTAACAGTGAAGCGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS CCA 72 bp | GAAAGGGGGAGAGTTGTGAGAGAGCAAGGGAAGATGTaGTTGGAGATGCAAACCATGAGATACGGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ERGRVVREQGKM*LEMQTMRYGPP Trigger: AGGAGGCCCGTATCTCATGGTTTGCATCTCCAACCACATCTTCCCTTGCTCTCTCACAACTCTCCCCCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS CAA 90 bp | ATCGGGAACAGCACCGTTCACTTCCTGCTTGACTTCTATCCCTTCTaGGAATGTGGTACTTTGGAGCTGCATGGCGTCCGGTTTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IGNSTVHFLLDFYPF*ECGTLELHGVRFVL Trigger: AAGGACAAACCGGACGCCATGCAGCTCCAAAGTACCACATTCCAAGAAGGGATAGAAGTCAAGCAGGAAGTGAACGGTGCTGTTCCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 |
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| CDS GCA 72 bp | GAGAAGGAAGTAGAAGTGGAAGAGGCAGAAGGTGCGTaGATACAGCCGGGAGGAAAAACGAAGCTCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EKEVEVEEAEGA*IQPGGKTKLSE Trigger: TTCTGAGAGCTTCGTTTTTCCTCCCGGCTGTATGCACGCACCTTCTGCCTCTTCCACTTCTACTTCCTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061070.6 ENSMUST00000109280.2 |
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| CDS CCA 72 bp | ACTGTTAACTTCAATGCTCCCAGCCTGAATCCACAGTaGTCTGTCAGACACTGTAAGGGAGCAGCAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: TVNFNAPSLNPQ*SVRHCKGAAGL Trigger: GAGTCCTGCTGCTCCCTTACAGTGTCTGACAGACCACTGTGGATTCAGGCTGGGAGCATTGAAGTTAACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094294.5 |
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| CDS CAA 72 bp | TACCGACGTGTGAAGTGGACTTTCGCATGGGCGGTTTaGGAAGTGGAGGTTTCACTTTGCTTCTTCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: YRRVKWTFAWAV*EVEVSLCFFCA Trigger: GGCACAGAAGAAGCAAAGTGAAACCTCCACTTCCAAAACCGCCCATGCGAAAGTCCACTTCACACGTCGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
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| CDS GCA 72 bp | GCAACAACACTGTTTTTACACTTATCACACAGGACTTaGCTGGGCCGTAGCTTAATCGCATTCATTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: ATTLFLHLSHRT*LGRSLIAFIIE Trigger: TTCAATAATGAATGCGATTAAGCTACGGCCCAGGCAAGTCCTGTGTGATAAGTGTAAAAACAGTGTTGTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061070.6 ENSMUST00000094294.5 ENSMUST00000109280.2 |
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