Pregenerated sensors for PWP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001785Ensembl transcript IDs: ENSMUST00000001836.11, ENSMUST00000217667.2, ENSMUST00000219256.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCTCCTCCCCAGGACTGGGACAAGCACGAGCCACCACACCAGTaGTTTGCTAACACAGCAAGACCCGTATCAAAAACTCTCCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: LSPPQDWDKHEPPHQ*FANTARPVSKTLQL Trigger: TAACTGGAGAGTTTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTTGTCCCAGTCCTGGGGAGGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CCA 90 bp | AATGGTGGAGTCTGGGAGGAGGGAGTGGACAGCCTTTCTGTGAGGTaGTGTGAGATTGCTAATTTAGGACCTCTTAAGTCCAGAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: NGGVWEEGVDSLSVR*CEIANLGPLKSRRL Trigger: AAGCCTTCTGGACTTAAGAGGTCCTAAATTAGCAATCTCACACCACCTCACAGAAAGGCTGTCCACTCCCTCCTCCCAGACTCCACCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR TCA 90 bp | GCTGTGGACTGCCACCAAGGCTGCAGAAAGGATGGCAACAGGACCTaGATTTCCATCTATGGTTGTAGATATACGTGGACATTTTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: AVDCHQGCRKDGNRT*ISIYGCRYTWTFLG Trigger: GCCTAAAAATGTCCACGTATATCTACAACCATAGATGGAAATTCAGGTCCTGTTGCCATCCTTTCTGCAGCCTTGGTGGCAGTCCACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR GCA 90 bp | ATCTGGGCTAGGATCAAAATTCAGCCATTCCACACTCAGAGGGTATaGAGACAGGAGTATGTCATGGTGGACGTAGAAAGACTCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IWARIKIQPFHTQRV*RQEYVMVDVERLLF Trigger: GAAGAGGAGTCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCCTCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR GCA 90 bp | CCACAAACGATGAGGTTGTCAGTCGGCTTAATCAAGAAATCTTCATaGTCATATTGTTCCGTGTCTTTCAAGGTGACATATGGATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PQTMRLSVGLIKKSS*SYCSVSFKVTYGSW Trigger: CCAGGATCCATATGTCACCTTGAAAGACACGGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR CCA 90 bp | GGCTTTATGGGCTTGACAAGTTCAAGTTTATTTGAAGGAAATAGATaGGAGAATGTACTGGGACCAAAACTTACAAGGTTATGTATTACT | + |
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Preference number: 1 (lower is better) Translates to: GFMGLTSSSLFEGNR*ENVLGPKLTRLCIT Trigger: AGTAATACATAACCTTGTAAGTTTTGGTCCCAGTACATTCTCCCATCTATTTCCTTCAAATAAACTTGAACTTGTCAAGCCCATAAAGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR GCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGCCAAAGGCTGTGGACTaGCACCAAGGCTGCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: DSLGSLVLGICLSLSPPQPKAVD*HQGCRK Trigger: CTTTCTGCAGCCTTGGTGGCAGTCCACAGCCTTTGG...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CAA 90 bp | CTCCTCCCCAGGACTGGGACAAGCACGAGCCACCACACCAGTGCTTaGCTAACACAGCAAGACCCGTATCAAAAACTCTCCAGTTACCAT | + |
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Preference number: 2 (lower is better) Translates to: LLPRTGTSTSHHTSA*LTQQDPYQKLSSYH Trigger: ATGGTAACTGGAGAGTTTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTTGTCCCAGTCCTGGGGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR CCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGGGTTGTAGATATACGTaGACATTTTTAGGCCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: DSLGSLVLGICLSLSPPQGCRYT*TFLGQS Trigger: AGACTGGCCTAAAAATGTCCACGTATATCTACAACC...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR GCA 90 bp | CTAGGATCAAAATTCAGCCATTCCACACTCAGAGGGTATGCAGACAGGAGTATGCGTGCACCTCTAGATTaGACTGCTCTTGTTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LGSKFSHSTLRGYADRSMRAPLD*TALVQH Trigger: GTGCTGAACAAGAGCAGTGCAATCTAGAGGTGCACG...CATACTCCTGTCTGCATACCCTCTGAGTGTGGAATGGCTGAATTTTGATCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR-3UTR CCA 90 bp | AAGACTGGTTCTAGAGAGTCCACTATATCCAGGTCCCATACCTCGATGACAGGACCCAGTAGATGCATCTaGGCTAGGATCAAAATTCAG | + |
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Preference number: 2 (lower is better) Translates to: KTGSRESTISRSHTSMTGPSRCI*ARIKIQ Trigger: CTGAATTTTGATCCTAGCCCAGATGCATCTACTGGG...TCCTGTCATCGAGGTATGGGACCTGGATATAGTGGACTCTCTAGAACCAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR CAA 90 bp | TGTCCTTCTGCTGAGGAACTCTTCTTCCCTTTCTTCTTCTTCTTTTaGGAAAGCTTGCTTCCCAGTGTGAAGACTGGTTCTAGAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: CPSAEELFFPFFFFF*ESLLPSVKTGSRES Trigger: GGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCCAAAAAGAAGAAGAAGAAAGGGAAGAAGAGTTCCTCAGCAGAAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTAGCAGCCCAAAGGCTGTaGACTGCCACCAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLGPKLTRLCITLTVCCLAAQRL*TATKAA Trigger: TGCAGCCTTGGTGGCAGTCCACAGCCTTTGGGCTGC...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CAA 90 bp | TCTAGATTGCACTGCTCTTGTTCAGCACGGCCACAAACGATGAGGTaGTCAGTCGGCTTAATCAAGAAATCTTCATGCTCATATTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SRLHCSCSARPQTMR*SVGLIKKSSCSYCS Trigger: GGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGGCCGTGCTGAACAAGAGCAGTGCAATCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGGACTGCCACCAAGGCTaGAGAAAGGATGGCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: NIQKVKIPLGITFINGLGDCHQG*RKDGNR Trigger: CCTGTTGCCATCCTTTCTGCAGCCTTGGTGGCAGTC...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CAA 90 bp | CACATTTATCAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTaGATTTGCCAACACGAGGGCCTGAATTCAATTCTAGAACCTACC | + |
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Preference number: 2 (lower is better) Translates to: HIYQWVRDTAQLVKC*ICQHEGLNSILEPT Trigger: GGTAGGTTCTAGAATTGAATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CAA 90 bp | GATGAGGTTGTCAGTCGGCTTAATCAAGAAATCTTCATGCTCATATaGTTCCGTGTCTTTCAAGGTGACATATGGATCCTGGTCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: DEVVSRLNQEIFMLI*FRVFQGDIWILVIT Trigger: AGTAATGACCAGGATCCATATGTCACCTTGAAAGACACGGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGGAGCCACCACACCAGTaGTTTGCTAACACAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: NIQKVKIPLGITFINGLGEPPHQ*FANTAR Trigger: TCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTC...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR GCA 90 bp | AACTACAGTGCTGTCTGCCGATGCACTTGCAAGCACATTTCTGACTGTCTTATTATCAAGAAATCTTCATaGTCATATTGTTCCGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: NYSAVCRCTCKHISDCLIIKKSS*SYCSVS Trigger: AGACACGGAACAATATGAGCATGAAGATTTCTTGAT...AATAAGACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR-3UTR CCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGAGGCTGCAGAAAGGATaGCAACAGGACCTGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: NIQKVKIPLGITFINGLGRLQKG*QQDLNF Trigger: GAAATTCAGGTCCTGTTGCCATCCTTTCTGCAGCCT...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR GCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGGTGAAATGTTTGATTTaGCAACACGAGGGCCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: NIQKVKIPLGITFINGLGVKCLI*QHEGLN Trigger: ATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCAC...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR GCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTATTACCATGTATTTTATaGCTAGAGTTCCAAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: VLGPKLTRLCITLTVCCLLPCIL*LEFQRS Trigger: TGACCTTTGGAACTCTAGGCATAAAATACATGGTAA...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR CAA 90 bp | GTGAGATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCACCACACCAGTGCTTaGCTAACACAGCAAGACCCG | + |
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Preference number: 3 (lower is better) Translates to: VRFAGQPGPRNLPVSLSSHHTSA*LTQQDP Trigger: CGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTG...GGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR GCA 72 bp | CAGTACCCAGTAGAAGGCAGCCCAAAGGCTGTGGACTaGCACCAAGGCTGCAGAAAGGATGGCAACAGGACC | + |
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Preference number: 3 (lower is better) Translates to: QYPVEGSPKAVD*HQGCRKDGNRT Trigger: GGTCCTGTTGCCATCCTTTCTGCAGCCTTGGTGGCAGTCCACAGCCTTTGGGCTGCCTTCTACTGGGTACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR GCA 72 bp | CCCCAGGACTGGGACAAGCACGAGCCACCACACCAGTaGTTTGCTAACACAGCAAGACCCGTATCAAAAACT | + |
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Preference number: 3 (lower is better) Translates to: PQDWDKHEPPHQ*FANTARPVSKT Trigger: AGTTTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTTGTCCCAGTCCTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR-3UTR CAA 90 bp | AGCCTGGCTACTGACTTCCCCACAGACAGATCCCAGAGAACTACAGTGCTGTCTCCACAAACGATGAGGTaGTCAGTCGGCTTAATCAAG | + |
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Preference number: 3 (lower is better) Translates to: SLATDFPTDRSQRTTVLSPQTMR*SVGLIK Trigger: CTTGATTAAGCCGACTGACAACCTCATCGTTTGTGG...AGACAGCACTGTAGTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR GCA 72 bp | CCCCACAGACAGATCCCAGAGAACTACAGTGCTGTCTaGCGATGCACTTGCAAGCACATTTCTGACTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PHRQIPENYSAV*RCTCKHISDCL Trigger: AAGACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTAGTTCTCTGGGATCTGTCTGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR CCA 72 bp | GTCTGGGAGGAGGGAGTGGACAGCCTTTCTGTGAGGTaGTGTGAGATTGCTAATTTAGGACCTCTTAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: VWEEGVDSLSVR*CEIANLGPLKS Trigger: GGACTTAAGAGGTCCTAAATTAGCAATCTCACACCACCTCACAGAAAGGCTGTCCACTCCCTCCTCCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR TCA 72 bp | TGCCACCAAGGCTGCAGAAAGGATGGCAACAGGACCTaGATTTCCATCTATGGTTGTAGATATACGTGGACA | + |
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Preference number: 3 (lower is better) Translates to: CHQGCRKDGNRT*ISIYGCRYTWT Trigger: TGTCCACGTATATCTACAACCATAGATGGAAATTCAGGTCCTGTTGCCATCCTTTCTGCAGCCTTGGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR TCA 72 bp | CTAGAGAGTCCACTATATCCAGGTCCCATACCTCGATaGCAGGAGTCATGTTTCCCACAGCAATGTAATTCC | + |
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Preference number: 3 (lower is better) Translates to: LESPLYPGPIPR*QESCFPQQCNS Trigger: GGAATTACATTGCTGTGGGAAACATGACTCCTGTCATCGAGGTATGGGACCTGGATATAGTGGACTCTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR GCA 72 bp | AGACAGATCCCAGAGAACTACAGTGCTGTCTGCCGATaGACTTGCAAGCACATTTCTGACTGTCTTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: RQIPENYSAVCR*TCKHISDCLIP Trigger: TGGAATAAGACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTAGTTCTCTGGGATCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR GCA 72 bp | AGGATCAAAATTCAGCCATTCCACACTCAGAGGGTATaGAGACAGGAGTATGTCATGGTGGACGTAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RIKIQPFHTQRV*RQEYVMVDVER Trigger: TCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCCTCTGAGTGTGGAATGGCTGAATTTTGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR TCA 72 bp | AATCTTCATGCTCATATTGTTCCGTGTCTTTCAAGGTaGCATATGGATCCTGGTCATTACTGCCATAGACCG | + |
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Preference number: 3 (lower is better) Translates to: NLHAHIVPCLSR*HMDPGHYCHRP Trigger: CGGTCTATGGCAGTAATGACCAGGATCCATATGTCACCTTGAAAGACACGGAACAATATGAGCATGAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR GCA 72 bp | GTTAGGGACACTGCTCAGTTAGTGAAATGTTTGATTTaGCAACACGAGGGCCTGAATTCAATTCTAGAACCT | + |
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Preference number: 3 (lower is better) Translates to: VRDTAQLVKCLI*QHEGLNSILEP Trigger: AGGTTCTAGAATTGAATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR GCA 72 bp | ATGAGGTTGTCAGTCGGCTTAATCAAGAAATCTTCATaGTCATATTGTTCCGTGTCTTTCAAGGTGACATAT | + |
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Preference number: 3 (lower is better) Translates to: MRLSVGLIKKSS*SYCSVSFKVTY Trigger: ATATGTCACCTTGAAAGACACGGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
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| 3UTR CCA 72 bp | AAAGGTGAAAATACCTTTAGGGATCACATTTATCAATaGGTTAGGGACACTGCTCAGTTAGTGAAATGTTTG | + |
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Preference number: 3 (lower is better) Translates to: KGENTFRDHIYQ*VRDTAQLVKCL Trigger: CAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CCA 72 bp | GGCTTGACAAGTTCAAGTTTATTTGAAGGAAATAGATaGGAGAATGTACTGGGACCAAAACTTACAAGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GLTSSSLFEGNR*ENVLGPKLTRL Trigger: TAACCTTGTAAGTTTTGGTCCCAGTACATTCTCCCATCTATTTCCTTCAAATAAACTTGAACTTGTCAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR GCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGTGGGTCGGGCCACTCTaGATGCCATCTTCTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQWVGPL*MPSSEG Trigger: CCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCA...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR GCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGCATCTTCTGAAGGGTTaGCTGCCTCCTCTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQHLLKG*LPPLLH Trigger: GTGAAGAAGAGGAGGCAGGCAACCCTTCAGAAGATG...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR GCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGCGTGCACCTCTAGATTaGACTGCTCTTGTTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQRAPLD*TALVQH Trigger: GTGCTGAACAAGAGCAGTGCAATCTAGAGGTGCACG...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR TCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGAGGCAGCCTTTGATCTaGCTGCTAAGATCAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQRQPLI*LLRSRP Trigger: TGGTCTTGATCTTAGCAGTCAGATCAAAGGCTGCCT...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR CCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGACAGAGACTCGCCAATaGTCTCAGCATCTGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQTETRQ*SQHLGY Trigger: ATAACCCAGATGCTGAGACCATTGGCGAGTCTCTGT...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR CCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGCCCAGTAGATGCATCTaGGCTAGGATCAAAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQPSRCI*ARIKIQ Trigger: CTGAATTTTGATCCTAGCCCAGATGCATCTACTGGG...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR CCA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGAGTCTGTGCTTCAAATaGATGAAACTGCAGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: DSLGSLVLGICLSLSPPQSLCFK*MKLQSL Trigger: CAGACTCTGCAGTTTCATCCATTTGAAGCACAGACT...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| 3UTR CAA 72 bp | AGGACTGGGACAAGCACGAGCCACCACACCAGTGCTTaGCTAACACAGCAAGACCCGTATCAAAAACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTGTSTSHHTSA*LTQQDPYQKLS Trigger: GGAGAGTTTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTTGTCCCAGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR CCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAATGTGCGGTCATCTTGTaGATCCCCATCCTCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKCAVIL*IPILQG Trigger: TCCCTGGAGGATGGGGATCCACAAGATGACCGCACA...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR TCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAAGGTCCCATACCTCGATaGCAGGAGTCATGTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKGPIPR*QESCFP Trigger: TGGGAAACATGACTCCTGTCATCGAGGTATGGGACC...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS-3UTR GCA 90 bp | GTGCTGTCTGCCGATGCACTTGCAAGCACATTTCTGACTGTCTTATTCCAGGATTCGGGCCACTCTGCATaGCATCTTCTGAAGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSADALASTFLTVLFQDSGHSA*HLLKGC Trigger: GCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGA...ATCCTGGAATAAGACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR TCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAACAAGAAATGACACGGTaGGAAGTGGTTCCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKQEMTR*EVVPGH Trigger: GTGACCTGGAACCACTTCTCACCGTGTCATTTCTTG...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR TCA 90 bp | GTGAGATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCAAATGCTTCATTTACTaGAGACACAGTGCTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRFAGQPGPRNLPVSLSSKCFIY*RHSAYV Trigger: GACATAAGCACTGTGTCTTCAGTAAATGAAGCATTT...GGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | GGTGACATATGGATCCTGGTCATTACTGCCATAGACCGTAAGACCCAACAGAGACATCTTCTGAAGGGTTaGCTGCCTCCTCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDIWILVITAIDRKTQQRHLLKG*LPPLLH Trigger: GTGAAGAAGAGGAGGCAGGCAACCCTTCAGAAGATG...TCTCTGTTGGGTCTTACGGTCTATGGCAGTAATGACCAGGATCCATATGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCATCAAGAAATCTTCATaGTCATATTGTTCCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRFAGQPGPRNLPVSLSSIKKSS*SYCSVS Trigger: AGACACGGAACAATATGAGCATGAAGATTTCTTGAT...GGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CCA 90 bp | AGCACATTTCTGACTGTCTTATTCCAGGATAGGTCAAGGACAGCATCAGTATGTTGTGCGGTCATCTTGTaGATCCCCATCCTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STFLTVLFQDRSRTASVCCAVIL*IPILQG Trigger: TCCCTGGAGGATGGGGATCCACAAGATGACCGCACA...ACATACTGATGCTGTCCTTGACCTATCCTGGAATAAGACAGTCAGAAATGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR TCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTATCTCGATCTGCCCACTaGACCGCCACTGGCGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGPKLTRLCITLTVCCLSRSAH*TATGGG Trigger: ACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGA...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR TCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAAAAAGATTGGCTTGTCTaGACGTGCATCCAGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKKDWLV*TCIQVI Trigger: TATAACCTGGATGCACGTTCAGACAAGCCAATCTTT...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR TCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAATTCATGTCTCTAGAGTaGATGAGACTTGGCCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKFMSLE*MRLGLS Trigger: AGATAGGCCAAGTCTCATTCACTCTAGAGACATGAA...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | TATCAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACTCGGGCCACTCTGCATaGCATCTTCTGAAGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YQWVRDTAQLVKCLICQHSGHSA*HLLKGC Trigger: GCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGA...GTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | TATCAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACTCTGGCTGGGATCTCTaGAGTCATACAGAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: YQWVRDTAQLVKCLICQHSGWDL*SHTEPP Trigger: CGGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGA...GTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| 3UTR CAA 72 bp | CACTGCTCTTGTTCAGCACGGCCACAAACGATGAGGTaGTCAGTCGGCTTAATCAAGAAATCTTCATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSCSARPQTMR*SVGLIKKSSCS Trigger: TGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGGCCGTGCTGAACAAGAGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR TCA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAATTGCAAGCACATTTCTaGCTGTCTTATTCCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KHEPPHQCFANTARPVSKLQAHF*LSYSRI Trigger: TATCCTGGAATAAGACAGTCAGAAATGTGCTTGCAA...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR TCA 90 bp | TATCAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACGCTTGCTTCCCAGTGTaGAGACTGGTTCTAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YQWVRDTAQLVKCLICQHACFPV*RLVLES Trigger: ACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGC...GTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTAGTCACTCTCTCGATCTaGCCACTGAACCGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGPKLTRLCITLTVCCLVTLSI*PLNRHW Trigger: CCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGAC...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CCA 90 bp | AGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACGAGGGCCTGAATAATGGTCTCAGCATCTaGGTTATCCTCTTCGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RDTAQLVKCLICQHEGLNNGLSI*VILFVI Trigger: TATGACGAAGAGGATAACCCAGATGCTGAGACCATT...ATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGCATTGGTGTCTGCTGTaGACTCCTGCTCCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIQKVKIPLGITFINGLGHWCLL*TPAPTG Trigger: CCCTGTGGGAGCAGGAGTCCACAGCAGACACCAATG...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| 3UTR CAA 72 bp | GCTGAGGAACTCTTCTTCCCTTTCTTCTTCTTCTTTTaGGAAAGCTTGCTTCCCAGTGTGAAGACTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEELFFPFFFFF*ESLLPSVKTGS Trigger: AGAACCAGTCTTCACACTGGGAAGCAAGCTTTCCAAAAAGAAGAAGAAGAAAGGGAAGAAGAGTTCCTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR GCA 90 bp | TATCAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACGTCTGCCGATGCACTTaGAAGCACATTTCTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YQWVRDTAQLVKCLICQHVCRCT*KHISDC Trigger: ACAGTCAGAAATGTGCTTGCAAGTGCATCGGCAGAC...GTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| 3UTR CAA 72 bp | CAATGGGTTAGGGACACTGCTCAGTTAGTGAAATGTTaGATTTGCCAACACGAGGGCCTGAATTCAATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QWVRDTAQLVKC*ICQHEGLNSIL Trigger: TAGAATTGAATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCTAACCCATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | AGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACGAGGGCCTGAATGATTTCATCGTTGTGTaGATTAAGTGTAAAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTAQLVKCLICQHEGLNDFIVV*IKCKDW Trigger: CCAATCTTTACACTTAATGCACACAACGATGAAATC...ATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | AACATTCAAAAGGTGAAAATACCTTTAGGGATCACATTTATCAATGGGTTAGGGCACACTCAGAGGGTATaGAGACAGGAGTATGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: NIQKVKIPLGITFINGLGHTQRV*RQEYVM Trigger: CATGACATACTCCTGTCTGCATACCCTCTGAGTGTG...CCCTAACCCATTGATAAATGTGATCCCTAAAGGTATTTTCACCTTTTGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTAGTAATTCCCAGTAGATaGATCTGGGCTAGGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPKLTRLCITLTVCCLVIPSR*IWARIK Trigger: TTTGATCCTAGCCCAGATGCATCTACTGGGAATTAC...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR GCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTATTACTGAAGACACAGTaGTTATGTCCCAAACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPKLTRLCITLTVCCLLLKTQ*LCPKPE Trigger: TTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAA...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CCA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTAAAAGGCATAAACAAATaGCAAGTCAGGACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLGPKLTRLCITLTVCCLKGINK*QVRTAG Trigger: TCCTGCTGTCCTGACTTGCCATTTGTTTATGCCTTT...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS CCA 90 bp | GTCGTACCCCGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTTGTaGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGCCTGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVPRQLVIVQCAVIL*IPILQGLPRRCLGR Trigger: CCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGGTACGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS CCA 90 bp | TCAGCATCCCGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTTGTaGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGCCTGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SASRQLVIVQCAVIL*IPILQGLPRRCLGR Trigger: CCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGATGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217667.2 ENSMUST00000219256.2 |
||
| CDS CCA 90 bp | TCATCTTGTGGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGCCTaGGTCGGGCCACTCTGCATGCCATCTTCTGAAGGGTTGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSCGSPSSRDSLGGA*VGPLCMPSSEGLPA Trigger: GGCAGGCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
||
| CDS CCA 90 bp | GGTTCACTTCCTCTTTACTTAGCTCTACCTTGTCTGGAGTCTCTTTaGCCACGCCGCGGCGGACCCAGGCCACGCAGGTCACTTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSLPLYLALPCLESL*PRRGGPRPRRSLGG Trigger: GCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAAGGTAGAGCTAAGTAAAGAGGAAGTGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
||
| CDS TCA 90 bp | GACACGGTGAGAAGTGGTTCCAGGTCACTCTCTCGATCTGCCCACTaGACCGCCACTGGCGGTGGTTCTGGCTGGGATCTCTGCAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DTVRSGSRSLSRSAH*TATGGGSGWDLCSH Trigger: ATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTGGAACCACTTCTCACCGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS CCA 90 bp | AAGTGGTTCCAGGTCACTCTCTCGATCTGCCCACTGAACCGCCACTaGCGGTGGTTCTGGCTGGGATCTCTGCAGTCATACAGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KWFQVTLSICPLNRH*RWFWLGSLQSYRAT Trigger: GGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTGGAACCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS CCA 90 bp | TTCCAGGTCACTCTCTCGATCTGCCCACTGAACCGCCACTGGCGGTaGTTCTGGCTGGGATCTCTGCAGTCATACAGAGCCACCGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQVTLSICPLNRHWR*FWLGSLQSYRATDL Trigger: CAAATCGGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | GATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGCCATCTTCTGAAGGGTaGCCTGCCTCCTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSLGSLVLGICLSLSPPQPSSEG*PASSSS Trigger: TGAAGAAGAGGAGGCAGGCAACCCTTCAGAAGATGG...CTGGGGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | CAGAGGGTATGCAGACAGGAGTATGTCATGGTGGACGTAGAAAGACTCCTCTTCTTGTCTGGAGTCTCTTaGGCCACGCCGCGGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QRVCRQEYVMVDVERLLFLSGVS*ATPRRT Trigger: GGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAA...GAAGAGGAGTCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCTTACTTAGCTCTACCTaGTCTGGAGTCTCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRFAGQPGPRNLPVSLSSLLSST*SGVSLA Trigger: GGCCAAAGAGACTCCAGACAAGGTAGAGCTAAGTAA...GGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS TCA 90 bp | CTGCAGAGTCTGAACCTTGTCTGTATGTGCAGTAAGCCTGGCTACTaGCTTCCCCACAGACAGATCCCAGAGAACTACAGTGCTGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSLNLVCMCSKPGY*LPHRQIPENYSAVC Trigger: GCAGACAGCACTGTAGTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGCTTACTGCACATACAGACAAGGTTCAGACTCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCCATTCCACACTCAGAGGGTATGCAGACAGGAGTATGTCATGGTGGACCCATCTTCTGAAGGGTaGCCTGCCTCCTCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IQPFHTQRVCRQEYVMVDPSSEG*PASSSS Trigger: TGAAGAAGAGGAGGCAGGCAACCCTTCAGAAGATGG...GTCCACCATGACATACTCCTGTCTGCATACCCTCTGAGTGTGGAATGGCTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGATTCGCTGGGCAGCCTGGTCCTAGGAATCTGCCTGTCTCTCTCTCCTCCCCAGAGATTTCATCGTaGTGTGCATTAAGTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRFAGQPGPRNLPVSLSSPEISS*CALSVK Trigger: CTTTACACTTAATGCACACAACGATGAAATCTCTGG...GGAGGAGAGAGAGACAGGCAGATTCCTAGGACCAGGCTGCCCAGCGAATCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | AAGCACGAGCCACCACACCAGTGCTTTGCTAACACAGCAAGACCCGTATCAAAACCACAAACGATGAGGTaGTCAGTCGGCTTAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KHEPPHQCFANTARPVSKPQTMR*SVGLIK Trigger: CTTGATTAAGCCGACTGACAACCTCATCGTTTGTGG...TTTTGATACGGGTCTTGCTGTGTTAGCAAAGCACTGGTGTGGTGGCTCGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTATTGTCTGGAGTCTCTTaGGCCACGCCGCGGCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLGPKLTRLCITLTVCCLLSGVS*ATPRRT Trigger: GGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAA...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS TCA 90 bp | CTTCACTCCCACCTTCTTCTTGCAACTTTCCTTTTGCTTCAGCGATaGGACGGTTCACTTCCTCTTTACTTAGCTCTACCTTGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHSHLLLATFLLLQR*DGSLPLYLALPCLE Trigger: CTCCAGACAAGGTAGAGCTAAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGGTGGGAGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACACTGCTCAGTTAGTGAAATGTTTGATTTGCCAACACGAGGGCCTGAATAGTGTAAAGATTGGCTaGTCTGAACGTGCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RDTAQLVKCLICQHEGLNSVKIG*SERASR Trigger: CCTGGATGCACGTTCAGACAAGCCAATCTTTACACT...ATTCAGGCCCTCGTGTTGGCAAATCAAACATTTCACTAACTGAGCAGTGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | TTCTTTTTGGAAAGCTTGCTTCCCAGTGTGAAGACTGGTTCTAGAGAGTCCACTTTACTTAGCTCTACCTaGTCTGGAGTCTCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFLESLLPSVKTGSRESTLLSST*SGVSLA Trigger: GGCCAAAGAGACTCCAGACAAGGTAGAGCTAAGTAA...AGTGGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCCAAAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219256.2 |
||
| CDS CCA 90 bp | CACCGATTTGTCATAGGACCCAGAAATCAGAGTCTGTGCTTCAAATaGATGAAACTGCAGAGTCTGAACCTTGTCTGTATGTGCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRFVIGPRNQSLCFK*MKLQSLNLVCMCSK Trigger: CTTACTGCACATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGACAAATCGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS TCA 90 bp | AGAGATTTCATCGTTGTGTGCATTAAGTGTAAAGATTGGCTTGTCTaGACGTGCATCCAGGTTATAGACAAAGCCATCATCTGTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDFIVVCIKCKDWLV*TCIQVIDKAIICTG Trigger: GCCAGTACAGATGATGGCTTTGTCTATAACCTGGATGCACGTTCAGACAAGCCAATCTTTACACTTAATGCACACAACGATGAAATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
||
| CDS-3UTR CAA 90 bp | GTACTGGGACCAAAACTTACAAGGTTATGTATTACTTTGACAGTTTGTTGTCTAACTCCCACCTTCTTCTaGCAACTTTCCTTTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLGPKLTRLCITLTVCCLTPTFF*QLSFCF Trigger: GAAGCAAAAGGAAAGTTGCAAGAAGAAGGTGGGAGT...TAGACAACAAACTGTCAAAGTAATACATAACCTTGTAAGTTTTGGTCCCAGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS CCA 72 bp | GGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGCCTaGGTCGGGCCACTCTGCATGCCATCTTCTGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GSPSSRDSLGGA*VGPLCMPSSEG Trigger: CCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS CAA 72 bp | CCCCGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTaGTGGATCCCCATCCTCCAGGGACTCCCTAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: PRQLVIVQCAVI*WIPILQGLPRR Trigger: CCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS GCA 72 bp | AGGGACTCCCTAGGCGGTGCCTGGGTCGGGCCACTCTaGATGCCATCTTCTGAAGGGTTGCCTGCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RDSLGGAWVGPL*MPSSEGLPASS Trigger: AGAGGAGGCAGGCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCGCCTAGGGAGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS CCA 72 bp | CGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTTGTaGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RQLVIVQCAVIL*IPILQGLPRRC Trigger: GCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001836.11 ENSMUST00000217667.2 ENSMUST00000219256.2 |
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| CDS CAA 72 bp | TCCCGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTaGTGGATCCCCATCCTCCAGGGACTCCCTAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRQLVIVQCAVI*WIPILQGLPRR Trigger: CCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217667.2 ENSMUST00000219256.2 |
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| CDS CAA 90 bp | GTCTCAGCATCCCGCCAGCTCGTCATCGTCCAGTGTGCGGTCATCTaGTGGATCCCCATCCTCCAGGGACTCCCTAGGCGGTGCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: VSASRQLVIVQCAVI*WIPILQGLPRRCLG Trigger: ACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGATGCTGAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217667.2 |
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| CDS CAA 90 bp | CGGTTCACTTCCTCTTTACTTAGCTCTACCTTGTCTGGAGTCTCTTaGGCCACGCCGCGGCGGACCCAGGCCACGCAGGTCACTTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RFTSSLLSSTLSGVS*ATPRRTQATQVTWR Trigger: CCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAAGGTAGAGCTAAGTAAAGAGGAAGTGAACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS GCA 72 bp | CACGGTGAGAAGTGGTTCCAGGTCACTCTCTCGATCTaGCCACTGAACCGCCACTGGCGGTGGTTCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: HGEKWFQVTLSI*PLNRHWRWFWL Trigger: CAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTGGAACCACTTCTCACCGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS GCA 72 bp | GGTCTCAGCATCCCGCCAGCTCGTCATCGTCCAGTGTaGGGTCATCTTGTGGATCCCCATCCTCCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: GLSIPPARHRPV*GHLVDPHPPGT Trigger: AGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGATGCTGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217667.2 |
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| CDS GCA 72 bp | CTAAGTCGTACCCCGCCAGCTCGTCATCGTCCAGTGTaGGGTCATCTTGTGGATCCCCATCCTCCAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: LSRTPPARHRPV*GHLVDPHPPGT Trigger: AGTCCCTGGAGGATGGGGATCCACAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGGTACGACTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS CCA 72 bp | TCGATCTGCCCACTGAACCGCCACTGGCGGTGGTTCTaGCTGGGATCTCTGCAGTCATACAGAGCCACCGAT | + |
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Preference number: 6 (lower is better) Translates to: SICPLNRHWRWF*LGSLQSYRATD Trigger: ATCGGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS CCA 72 bp | CAGGTCACTCTCTCGATCTGCCCACTGAACCGCCACTaGCGGTGGTTCTGGCTGGGATCTCTGCAGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: QVTLSICPLNRH*RWFWLGSLQSY Trigger: GTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGTGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS CAA 90 bp | GCTTCAGCGATGAGACGGTTCACTTCCTCTTTACTTAGCTCTACCTaGTCTGGAGTCTCTTTGGCCACGCCGCGGCGGACCCAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: ASAMRRFTSSLLSST*SGVSLATPRRTQAT Trigger: CGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAAGGTAGAGCTAAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS TCA 72 bp | CTGAACCTTGTCTGTATGTGCAGTAAGCCTGGCTACTaGCTTCCCCACAGACAGATCCCAGAGAACTACAGT | + |
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Preference number: 6 (lower is better) Translates to: LNLVCMCSKPGY*LPHRQIPENYS Trigger: ACTGTAGTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGCTTACTGCACATACAGACAAGGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS TCA 72 bp | TTGTCAGCGGAAGCAGTCACAAGGCAGCCTTTGATCTaGCTGCTAAGATCAAGACCAGAGATTTCATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSAEAVTRQPLI*LLRSRPEISSL Trigger: CAACGATGAAATCTCTGGTCTTGATCTTAGCAGTCAGATCAAAGGCTGCCTTGTGACTGCTTCCGCTGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS TCA 72 bp | CACCTTCTTCTTGCAACTTTCCTTTTGCTTCAGCGATaGGACGGTTCACTTCCTCTTTACTTAGCTCTACCT | + |
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Preference number: 6 (lower is better) Translates to: HLLLATFLLLQR*DGSLPLYLALP Trigger: AGGTAGAGCTAAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS GCA 72 bp | TTCTTCACTCCCACCTTCTTCTTGCAACTTTCCTTTTaGTTCAGCGATGAGACGGTTCACTTCCTCTTTACT | + |
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Preference number: 6 (lower is better) Translates to: FFTPTFFLQLSF*FSDETVHFLFT Trigger: AGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGGTGGGAGTGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001836.11 ENSMUST00000219256.2 |
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| CDS CCA 72 bp | GTCATAGGACCCAGAAATCAGAGTCTGTGCTTCAAATaGATGAAACTGCAGAGTCTGAACCTTGTCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: VIGPRNQSLCFK*MKLQSLNLVCM Trigger: CATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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| CDS TCA 72 bp | ATCGTTGTGTGCATTAAGTGTAAAGATTGGCTTGTCTaGACGTGCATCCAGGTTATAGACAAAGCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: IVVCIKCKDWLV*TCIQVIDKAII Trigger: GATGATGGCTTTGTCTATAACCTGGATGCACGTTCAGACAAGCCAATCTTTACACTTAATGCACACAACGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001836.11 |
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