Pregenerated sensors for PUSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051557Ensembl transcript IDs: ENSMUST00000097737.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAGGAAGTGGTAGCTGCTaGAAGGTAGGCAGGACTGCC | + |
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Preference number: 2 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVGSGSC*KVGRTA Trigger: GGCAGTCCTGCCTACCTTCCAGCAGCTACCACTTCC...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGTAGCTGCTGGAAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTGTCCCGAGGAGGTGCTaGGCAGCCTCCTGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: GSGSCWKVGRTARALHSCVPRRC*AASCMA Trigger: GGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGAC...ACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTTCCAGCAGCTACCACTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTATGCCCTGGGCGGCGCTaGATGTCCAGGTGCGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVCPGRR*MSRCAA Trigger: CGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCA...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGGCGTTGCTCAGGGCATaGACCCCGGCATCGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: KVGRTARALHSCRLISAEALLRA*TPASVR Trigger: CCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGC...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTACGCTGGATGTCCAGGTaGGCCGCGTTGCTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVRWMSR*AALLRA Trigger: TGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCG...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGTAGCTGCTGGAAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTGAGCGTGGAAGTCGTTaGGCACTCGGAAGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSGSCWKVGRTARALHSCERGSR*ALGRPS Trigger: TGAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTC...ACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTTCCAGCAGCTACCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR TCA 90 bp | CTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAGAGAGCGCTTCAGGTGGGTGTTaGGGGCCTTGGCCACGACCT | + |
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Preference number: 4 (lower is better) Translates to: LVPHVVPFSDKGMSRVESASGGC*GPWPRP Trigger: AGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGC...GCTCTCTACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGGGTCCTGGAGGTGGCTaGGTGTCGAGCGTGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KVGRTARALHSCRLISAEGPGGG*VSSVEV Trigger: GACTTCCACGCTCGACACGCAGCCACCTCCAGGACC...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGTGCTGGGCAGCCTCCTaGATGGCCGCCATATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KVGRTARALHSCRLISAECWAAS*MAAISR Trigger: CCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCA...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAGCTGCGTGTCGAGCGTaGAAGTCGTTGGGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVAACRA*KSLGTR Trigger: CCGAGTGCCCAACGACTTCCACGCTCGACACGCAGC...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAAGAACTGCAGCCTCCTaGTCCCCTCGGGGAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVRTAAS*SPRGGQ Trigger: TTGTCCTCCCCGAGGGGAGCAGGAGGCTGCAGTTCT...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTACAGAGTTCAGCCGCTTaGCAGCCTCCTCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVQSSAA*QPPPGS Trigger: ACTTCCTGGAGGAGGCTGCCAAGCGGCTGAACTCTG...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGCCTTCAGTACACGAATaGCCGGGTGCTTCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KVGRTARALHSCRLISAEPSVHE*PGASGG Trigger: CCCACCTGAAGCACCCGGCCATTCGTGTACTGAAGG...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | CTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAGAGAGCGATATTGGTAGGTCCTaGAGGTGGCTGCGTGTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LVPHVVPFSDKGMSRVESDIGRS*RWLRVE Trigger: CTCGACACGCAGCCACCTCCAGGACCTACCAATATC...GCTCTCTACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTATCACTTTCACTTGTGTaGGTGCCAGGATCCCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVSLSLV*VPGSLA Trigger: GGCTAGGGATCCTGGCACCCACACAAGTGAAAGTGA...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR GCA 90 bp | CATAGCTGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTGGGGAGAAAGGCGACTaGCCTGGGCGGCGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: HSCRLISAEHNKCCTISTGEKGD*PGRRWM Trigger: CATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCC...AGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACAGCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR TCA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTATTGCCCAAGGGATCTTaGCTCTCCAGAATCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVLPKGS*LSRITF Trigger: GAAAGTGATTCTGGAGAGTCAAGATCCCTTGGGCAA...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | TGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTCATCTGCCGGGTGCTTCAGGTaGGTGTTGAGGGCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: CRLISAEHNKCCTISTSSAGCFR*VLRALA Trigger: GGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGC...AGATGAAGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | AGCTGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTCAGGGCAGCCTCCTGCATaGCCGCCATATCCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: SCRLISAEHNKCCTISTSGQPPA*PPYPGT Trigger: AGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCC...TGAAGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR TCA 90 bp | CATAGCTGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTGCGTACAGTATTTGTaGCTGGGCTGCCAGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: HSCRLISAEHNKCCTISTCVQYL*LGCQQT Trigger: AGTCTGCTGGCAGCCCAGTCACAAATACTGTACGCA...AGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACAGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CCA 90 bp | TGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTCATCTGGGCTGCCAGCAGACTaGAAGGCACTAAAATCATGT | + |
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Preference number: 4 (lower is better) Translates to: CRLISAEHNKCCTISTSSGLPAD*KALKSC Trigger: ACATGATTTTAGTGCCTTCCAGTCTGCTGGCAGCCC...AGATGAAGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | TCCGGGGAGAAAGGCGACTGCCCTGGGCGGCGCTGGATGTCCAGGTaGGCCGCGTTGCTCAGGGCATGCACCCCGGCATCGGTGCGGCTA | + |
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Preference number: 5 (lower is better) Translates to: SGEKGDCPGRRWMSR*AALLRACTPASVRL Trigger: TAGCCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | TTGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCTGGGCGGCGCTaGATGTCCAGGTGCGCCGCGTTGCTCAGGGCATGCACCCCGGCA | + |
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Preference number: 5 (lower is better) Translates to: LATTSGEKGDCPGRR*MSRCAALLRACTPA Trigger: TGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | CCTGGGCGGCGCTGGATGTCCAGGTGCGCCGCGTTGCTCAGGGCATaGACCCCGGCATCGGTGCGGCTAGAGATGGTGAACCTGACCGGG | + |
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Preference number: 5 (lower is better) Translates to: PGRRWMSRCAALLRA*TPASVRLEMVNLTG Trigger: CCCGGTCAGGTTCACCATCTCTAGCCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | TGGGTGTTGAGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGACTaGCCTGGGCGGCGCTGGATGTCCAGGTGCGCCGCGTTGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WVLRALATTSGEKGD*PGRRWMSRCAALLR Trigger: CCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | GTTGAGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCTaGGCGGCGCTGGATGTCCAGGTGCGCCGCGTTGCTCAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: VEGLGHDLRGERRLP*AALDVQVRRVAQGM Trigger: CATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS TCA 90 bp | GGAAGGCCTTCAGTACACGAATGGCCGGGTGCTTCAGGTGGGTGTTaGGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GRPSVHEWPGASGGC*GPWPRPPGRKATAL Trigger: CAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAAGGCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | GGCACTCGGAAGGCCTTCAGTACACGAATGGCCGGGTGCTTCAGGTaGGTGTTGAGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: GTRKAFSTRMAGCFR*VLRALATTSGEKGD Trigger: GTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAAGGCCTTCCGAGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | GCCAGGAGCAGCCTGTGGCCAGACGATATTGGTAGGTCCTGGAGGTaGCTGCGTGTCGAGCGTGGAAGTCGTTGGGCACTCGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ARSSLWPDDIGRSWR*LRVERGSRWALGRP Trigger: AGGCCTTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCTGCTCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | GGAGCAGCCTGTGGCCAGACGATATTGGTAGGTCCTGGAGGTGGCTaGGTGTCGAGCGTGGAAGTCGTTGGGCACTCGGAAGGCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: GAACGQTILVGPGGG*VSSVEVVGHSEGLQ Trigger: CTGAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | GGAAAGACTGGCTCTCAAACTCCAAGGTCCAGAACTGCAGCCTCCTaGTCCCCTCGGGGAGGACAAATGGGCTGGCTGGACCAGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: GKTGSQTPRSRTAAS*SPRGGQMGWLDQVT Trigger: TGTCACCTGGTCCAGCCAGCCCATTTGTCCTCCCCGAGGGGAGCAGGAGGCTGCAGTTCTGGACCTTGGAGTTTGAGAGCCAGTCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | ATTGGTAGGTCCTGGAGGTGGCTGCGTGTCGAGCGTGGAAGTCGTTaGGCACTCGGAAGGCCTTCAGTACACGAATGGCCGGGTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: IGRSWRWLRVERGSR*ALGRPSVHEWPGAS Trigger: TGAAGCACCCGGCCATTCGTGTACTGAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | TCCAGAACTGCAGCCTCCTGCTCCCCTCGGGGAGGACAAATGGGCTaGCTGGACCAGGTGACACTGAGACTCTTCGAAGTGTGCGTACAG | + |
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Preference number: 5 (lower is better) Translates to: SRTAASCSPRGGQMG*LDQVTLRLFEVCVQ Trigger: CTGTACGCACACTTCGAAGAGTCTCAGTGTCACCTGGTCCAGCCAGCCCATTTGTCCTCCCCGAGGGGAGCAGGAGGCTGCAGTTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | CTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTAGAGAGCTCCAGGTGCGCCGCGTaGCTCAGGGCATGCACCCCG | + |
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Preference number: 5 (lower is better) Translates to: LVPHVVPFSDKGMSRVESSRCAA*LRACTP Trigger: CGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGA...GCTCTCTACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | CTGCCAGCAGACTGGAAGGCACTAAAATCATGTGTCCCGAGGAGGTaGTGGGCAGCCTCCTGCATGGCCGCCATATCCAGGTACTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LPADWKALKSCVPRR*WAASCMAAISRYSV Trigger: GACAGAGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTTCCAGTCTGCTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | CCAGCAGACTGGAAGGCACTAAAATCATGTGTCCCGAGGAGGTGCTaGGCAGCCTCCTGCATGGCCGCCATATCCAGGTACTCTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PADWKALKSCVPRRC*AASCMAAISRYSVC Trigger: GCAGACAGAGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTTCCAGTCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTATGGGTGTTGAGGGCCTaGGCCACGACCTCCGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVWVLRA*ATTSGE Trigger: CTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCA...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | AAGGCACTAAAATCATGTGTCCCGAGGAGGTGCTGGGCAGCCTCCTaGATGGCCGCCATATCCAGGTACTCTGTCTGCAGAGCCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: KALKSCVPRRCWAAS*MAAISRYSVCRAQH Trigger: ATGCTGGGCTCTGCAGACAGAGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | GACTGCCTGGTACCCCATGTTGTTCCCTTTAGTGACAAAGGGATGTCCAGGGTATGCTTCAGGTGGGTGTaGAGGGCCTTGGCCACGACC | + |
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Preference number: 5 (lower is better) Translates to: DCLVPHVVPFSDKGMSRVCFRWV*RALATT Trigger: GGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCA...TACCCTGGACATCCCTTTGTCACTAAAGGGAACAACATGGGGTACCAGGCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGCGAGCGTGGAAGTCGTaGGGCACTCGGAAGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: KVGRTARALHSCRLISAERAWKS*GTRKAF Trigger: GAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTCG...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 90 bp | CTTCGAAGTGTGCGTACAGTATTTGTGACTGGGCTGCCAGCAGACTaGAAGGCACTAAAATCATGTGTCCCGAGGAGGTGCTGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LRSVRTVFVTGLPAD*KALKSCVPRRCWAA Trigger: GGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTTCCAGTCTGCTGGCAGCCCAGTCACAAATACTGTACGCACACTTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGACAGAGTTCAGCCGCTaGGCAGCCTCCTCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KVGRTARALHSCRLISAETEFSR*AASSRK Trigger: CTTCCTGGAGGAGGCTGCCAAGCGGCTGAACTCTGT...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGTAGCTGCTGGAAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTCAGAATCACTTTCACTaGTGTGGGTGCCAGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: GSGSCWKVGRTARALHSCQNHFH*CGCQDP Trigger: GGGATCCTGGCACCCACACAAGTGAAAGTGATTCTG...ACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTTCCAGCAGCTACCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 90 bp | ACTTCAAGAACAGGCCACGGGCTGGAGCAACTCGAGCCTGATACTTaGCCAAGGGATCTTGACTCTCCAGAATCACTTTCACTTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TSRTGHGLEQLEPDT*PRDLDSPESLSLVW Trigger: CCACACAAGTGAAAGTGATTCTGGAGAGTCAAGATCCCTTGGGCAAGTATCAGGCTCGAGTTGCTCCAGCCCGTGGCCTGTTCTTGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGTAGCTGCTGGAAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTGATGTAGGACCAAAGTaGTCATACAGCACTGACTTC | + |
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Preference number: 5 (lower is better) Translates to: GSGSCWKVGRTARALHSCDVGPK*SYSTDF Trigger: GAAGTCAGTGCTGTATGACAACTTTGGTCCTACATC...ACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTTCCAGCAGCTACCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | AAGGTAGGCAGGACTGCCAGAGCCCTACATAGCTGTAGATTAATCTCTGCCGAGAGCCCAGCATACATTTaGTTCAAACACAGGCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KVGRTARALHSCRLISAESPAYI*FKHRQL Trigger: CAACTGCCTGTGTTTGAACAAAATGTATGCTGGGCT...CTCGGCAGAGATTAATCTACAGCTATGTAGGGCTCTGGCAGTCCTGCCTACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | AGCTGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTCAACGGCCGCAACCCCATaGAAGTCAGTGCCCAAGTAC | + |
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Preference number: 5 (lower is better) Translates to: SCRLISAEHNKCCTISTSTAATP*KSVPKY Trigger: GTACTTGGGCACTGACTTCAATGGGGTTGCGGCCGT...TGAAGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS-3UTR CAA 90 bp | AGCTGTAGATTAATCTCTGCCGAGCACAATAAATGTTGTACAATCTCCACTTCATGTGGCCAGACGATATaGGTAGGTCCTGGAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SCRLISAEHNKCCTISTSCGQTI*VGPGGG Trigger: GCCACCTCCAGGACCTACCAATATCGTCTGGCCACA...TGAAGTGGAGATTGTACAACATTTATTGTGCTCGGCAGAGATTAATCTACAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | AGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGACTaGCCTGGGCGGCGCTGGATGTCCAGGTGCGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: RALATTSGEKGD*PGRRWMSRCAA Trigger: CGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | TGCCCTGGGCGGCGCTGGATGTCCAGGTGCGCCGCGTaGCTCAGGGCATGCACCCCGGCATCGGTGCGGCTA | + |
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Preference number: 6 (lower is better) Translates to: CPGRRWMSRCAA*LRACTPASVRL Trigger: TAGCCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | AAAGGCGACTGCCCTGGGCGGCGCTGGATGTCCAGGTaGGCCGCGTTGCTCAGGGCATGCACCCCGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: KGDCPGRRWMSR*AALLRACTPAS Trigger: CGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | ACCTCCGGGGAGAAAGGCGACTGCCCTGGGCGGCGCTaGATGTCCAGGTGCGCCGCGTTGCTCAGGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: TSGEKGDCPGRR*MSRCAALLRAC Trigger: GCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | CTTGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCTaGGCGGCGCTGGATGTCCAGGTGCGCCGCGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGHDLRGERRLP*AALDVQVRRVA Trigger: AGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | AAAGGCGACTGCCCTGGGCGGCGCTGGATGTCCAGGTGCGCCGCGTaGCTCAGGGCATGCACCCCGGCATCGGTGCGGCTAGAGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: KGDCPGRRWMSRCAA*LRACTPASVRLEMV Trigger: CACCATCTCTAGCCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCGCCGCCCAGGGCAGTCGCCTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | TTCAGTACACGAATGGCCGGGTGCTTCAGGTGGGTGTTGAGGGCCTaGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCTGGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: FSTRMAGCFRWVLRA*ATTSGEKGDCPGRR Trigger: GCGCCGCCCAGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | CGCTGGATGTCCAGGTGCGCCGCGTTGCTCAGGGCATaGACCCCGGCATCGGTGCGGCTAGAGATGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: RWMSRCAALLRA*TPASVRLEMVN Trigger: GTTCACCATCTCTAGCCGCACCGATGCCGGGGTGCATGCCCTGAGCAACGCGGCGCACCTGGACATCCAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | CGAATGGCCGGGTGCTTCAGGTGGGTGTTGAGGGCCTaGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RMAGCFRWVLRA*ATTSGEKGDCP Trigger: AGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | CGGAAGGCCTTCAGTACACGAATGGCCGGGTGCTTCAGGTGGGTGTaGAGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCGACTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RKAFSTRMAGCFRWV*RALATTSGEKGDCP Trigger: AGGGCAGTCGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAAGGCCTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS TCA 72 bp | TCAGTACACGAATGGCCGGGTGCTTCAGGTGGGTGTTaGGGGCCTTGGCCACGACCTCCGGGGAGAAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SVHEWPGASGGC*GPWPRPPGRKA Trigger: CGCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | AAGGCCTTCAGTACACGAATGGCCGGGTGCTTCAGGTaGGTGTTGAGGGCCTTGGCCACGACCTCCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KAFSTRMAGCFR*VLRALATTSGE Trigger: CTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAAGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | CATGTGTCCCGAGGAGGTGCTGGGCAGCCTCCTGCATaGCCGCCATATCCAGGTACTCTGTCTGCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HVSRGGAGQPPA*PPYPGTLSAEP Trigger: GGGCTCTGCAGACAGAGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | CGGCTAGAGATGGTGAACCTGACCGGGTCGACAGAGTTCAGCCGCTaGGCAGCCTCCTCCAGGAAGTTCAGCACCCCAACAGCGCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: RLEMVNLTGSTEFSR*AASSRKFSTPTARG Trigger: TCCGCGCGCTGTTGGGGTGCTGAACTTCCTGGAGGAGGCTGCCAAGCGGCTGAACTCTGTCGACCCGGTCAGGTTCACCATCTCTAGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | TCCTGGAGGTGGCTGCGTGTCGAGCGTGGAAGTCGTTaGGCACTCGGAAGGCCTTCAGTACACGAATGGCCG | + |
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Preference number: 6 (lower is better) Translates to: SWRWLRVERGSR*ALGRPSVHEWP Trigger: CGGCCATTCGTGTACTGAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | GCAGCCTCCTGCTCCCCTCGGGGAGGACAAATGGGCTaGCTGGACCAGGTGACACTGAGACTCTTCGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: AASCSPRGGQMG*LDQVTLRLFEV Trigger: CACTTCGAAGAGTCTCAGTGTCACCTGGTCCAGCCAGCCCATTTGTCCTCCCCGAGGGGAGCAGGAGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | TTCAGTACACGAATGGCCGGGTGCTTCAGGTGGGTGTaGAGGGCCTTGGCCACGACCTCCGGGGAGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FSTRMAGCFRWV*RALATTSGEKG Trigger: GCCTTTCTCCCCGGAGGTCGTGGCCAAGGCCCTCAACACCCACCTGAAGCACCCGGCCATTCGTGTACTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | GTCCTGGAGGTGGCTGCGTGTCGAGCGTGGAAGTCGTaGGGCACTCGGAAGGCCTTCAGTACACGAATGGCC | + |
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Preference number: 6 (lower is better) Translates to: VLEVAACRAWKS*GTRKAFSTRMA Trigger: GGCCATTCGTGTACTGAAGGCCTTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | AGCCTGTGGCCAGACGATATTGGTAGGTCCTGGAGGTaGCTGCGTGTCGAGCGTGGAAGTCGTTGGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: SLWPDDIGRSWR*LRVERGSRWAL Trigger: GAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | AGGAGCAGCCTGTGGCCAGACGATATTGGTAGGTCCTaGAGGTGGCTGCGTGTCGAGCGTGGAAGTCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RSSLWPDDIGRS*RWLRVERGSRW Trigger: CCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCTGCTCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | TGTGGCCAGACGATATTGGTAGGTCCTGGAGGTGGCTaGGTGTCGAGCGTGGAAGTCGTTGGGCACTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: CGQTILVGPGGG*VSSVEVVGHSE Trigger: TTCCGAGTGCCCAACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | GACTGGAAGGCACTAAAATCATGTGTCCCGAGGAGGTaGTGGGCAGCCTCCTGCATGGCCGCCATATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: DWKALKSCVPRR*WAASCMAAISR Trigger: CCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | ATGGTGAACCTGACCGGGTCGACAGAGTTCAGCCGCTaGGCAGCCTCCTCCAGGAAGTTCAGCACCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: MVNLTGSTEFSR*AASSRKFSTPT Trigger: TGTTGGGGTGCTGAACTTCCTGGAGGAGGCTGCCAAGCGGCTGAACTCTGTCGACCCGGTCAGGTTCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | TTGATTAGGCCAGGAGCAGCCTGTGGCCAGACGATATaGGTAGGTCCTGGAGGTGGCTGCGTGTCGAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: LIRPGAACGQTI*VGPGGGCVSSV Trigger: CACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCTGCTCCTGGCCTAATCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | CACAGGCAGTTGATTAGGCCAGGAGCAGCCTGTGGCCAGACGATATaGGTAGGTCCTGGAGGTGGCTGCGTGTCGAGCGTGGAAGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: HRQLIRPGAACGQTI*VGPGGGCVSSVEVV Trigger: AACGACTTCCACGCTCGACACGCAGCCACCTCCAGGACCTACCAATATCGTCTGGCCACAGGCTGCTCCTGGCCTAATCAACTGCCTGTG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | AAATCATGTGTCCCGAGGAGGTGCTGGGCAGCCTCCTaGATGGCCGCCATATCCAGGTACTCTGTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KSCVPRRCWAAS*MAAISRYSVCR Trigger: TCTGCAGACAGAGTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | TGGAAGGCACTAAAATCATGTGTCCCGAGGAGGTGCTaGGCAGCCTCCTGCATGGCCGCCATATCCAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: WKALKSCVPRRC*AASCMAAISRY Trigger: GTACCTGGATATGGCGGCCATGCAGGAGGCTGCCCAGCACCTCCTCGGGACACATGATTTTAGTGCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 90 bp | GGCCGCCATATCCAGGTACTCTGTCTGCAGAGCCCAGCATACATTTaGTTCAAACACAGGCAGTTGATTAGGCCAGGAGCAGCCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRHIQVLCLQSPAYI*FKHRQLIRPGAACG Trigger: GCCACAGGCTGCTCCTGGCCTAATCAACTGCCTGTGTTTGAACAAAATGTATGCTGGGCTCTGCAGACAGAGTACCTGGATATGGCGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | GCCTCCTGCATGGCCGCCATATCCAGGTACTCTGTCTaGAGAGCCCAGCATACATTTTGTTCAAACACAGGC | + |
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Preference number: 6 (lower is better) Translates to: ASCMAAISRYSV*RAQHTFCSNTG Trigger: GCCTGTGTTTGAACAAAATGTATGCTGGGCTCTGCAGACAGAGTACCTGGATATGGCGGCCATGCAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS GCA 72 bp | ACAGGCCACGGGCTGGAGCAACTCGAGCCTGATACTTaGCCAAGGGATCTTGACTCTCCAGAATCACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TGHGLEQLEPDT*PRDLDSPESLS Trigger: TGAAAGTGATTCTGGAGAGTCAAGATCCCTTGGGCAAGTATCAGGCTCGAGTTGCTCCAGCCCGTGGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CCA 72 bp | GTGCGTACAGTATTTGTGACTGGGCTGCCAGCAGACTaGAAGGCACTAAAATCATGTGTCCCGAGGAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VRTVFVTGLPAD*KALKSCVPRRC Trigger: GCACCTCCTCGGGACACATGATTTTAGTGCCTTCCAGTCTGCTGGCAGCCCAGTCACAAATACTGTACGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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| CDS CAA 72 bp | ATCCAGGTACTCTGTCTGCAGAGCCCAGCATACATTTaGTTCAAACACAGGCAGTTGATTAGGCCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: IQVLCLQSPAYI*FKHRQLIRPGA Trigger: TGCTCCTGGCCTAATCAACTGCCTGTGTTTGAACAAAATGTATGCTGGGCTCTGCAGACAGAGTACCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097737.5 |
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