Pregenerated sensors for PUS7L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033356Ensembl transcript IDs: ENSMUST00000049151.4
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGCACGGTGTCACACCAGCCACTTCGCGGTGGAAAGGAGGCAGTaGGGGAGAAAAGCACCGAGGTTTCGCCATCACCTCTCCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LARCHTSHFAVERRQ*GRKAPRFRHHLSKQ Trigger: CTGCTTGGAGAGGTGATGGCGAAACCTCGGTGCTTTTCTCCCGCACTGCCTCCTTTCCACCGCGAAGTGGCTGGTGTGACACCGTGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| 3UTR CCA 90 bp | TCTCTCCACCTCTCAAGAGTGGCGTGGAGCAGCCCGTGCTCAGAGTaGTGCTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: SLHLSRVAWSSPCSE*CSKDLELSRPEKNP Trigger: GGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAGCACCACTCTGAGCACGGGCTGCTCCACGCCACTCTTGAGAGGTGGAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| 3UTR CCA 72 bp | CAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTaGCGTGGAGCAGCCCGTGCTCAGAGTGGTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: QRGRCSLSTSQE*RGAARAQSGAP Trigger: TGGAGCACCACTCTGAGCACGGGCTGCTCCACGCCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| 3UTR GCA 72 bp | TGTCACACCAGCCACTTCGCGGTGGAAAGGAGGCAGTaGGGGAGAAAAGCACCGAGGTTTCGCCATCACCTC | + |
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Preference number: 3 (lower is better) Translates to: CHTSHFAVERRQ*GRKAPRFRHHL Trigger: GAGGTGATGGCGAAACCTCGGTGCTTTTCTCCCGCACTGCCTCCTTTCCACCGCGAAGTGGCTGGTGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| 3UTR CCA 72 bp | CTCTCAAGAGTGGCGTGGAGCAGCCCGTGCTCAGAGTaGTGCTCCAAAGACCTAGAACTTTCACGACCGGAG | + |
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Preference number: 3 (lower is better) Translates to: LSRVAWSSPCSE*CSKDLELSRPE Trigger: CTCCGGTCGTGAAAGTTCTAGGTCTTTGGAGCACCACTCTGAGCACGGGCTGCTCCACGCCACTCTTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGGCAGTCCGTCCCTGCTaGGGGCTTCTTGGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRAVRPC*GLLGTT Trigger: GGTGGTACCAAGAAGCCCTCAGCAGGGACGGACTGC...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGTGGCGGGGTCAGGATaGACTAGTCGGTGTGACACG | + |
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Preference number: 4 (lower is better) Translates to: PSPLQAARTLFSLHLSRVVAGSG*TSRCDT Trigger: CGTGTCACACCGACTAGTCCATCCTGACCCCGCCAC...CACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | GTTTCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCACCAGCACTGTGGTGCTaGCCGGGAAAAGATTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VSPSPLQAARTLFSLHLSPALWC*PGKDLV Trigger: AACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGG...TGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGCTTGGGTCCATAGGCTaGCAGTCTGTAAGATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWLGSIG*QSVRCC Trigger: GCAGCATCTTACAGACTGGCAGCCTATGGACCCAAG...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAACGGGCAGAACTACCTaGTGCAGTGCATATGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRTGRTT*CSAYVC Trigger: GCACACATATGCACTGCACCAGGTAGTTCTGCCCGT...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGATGGGTGAGGTTTTTATaGTGCCCTGAAAGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRWVRFL*CPESPR Trigger: ACGTGGGCTTTCAGGGCAGCATAAAAACCTCACCCA...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGTGCCTCACAGCACTGTaGAGAACAGCTCTGCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRCLTAL*RTALRF Trigger: AAACCGCAGAGCTGTTCTGCACAGTGCTGTGAGGCA...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGTTCCCAGCACTGTGGTaGTGCCCGGGAAAAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRFPALW*CPGKDL Trigger: CAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAA...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGCCCGGGAAAAGATTTaGTTTCCACCAGGTTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: PSPLQAARTLFSLHLSRVAREKI*FPPGFR Trigger: TCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGC...CACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAAATGAAGTCACTGGGTaGGGTTTTTATGCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRNEVTG*GFYAAL Trigger: CAGGGCAGCATAAAAACCTCACCCAGTGACTTCATT...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGCAGAATCATTGAGCTaGTTTCTCAGGTGCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRAESLS*FLRCLM Trigger: CATCAGGCACCTGAGAAATCAGCTCAATGATTCTGC...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTCAGGGCGGGCACCCTaGACCTACAGGCCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: TTGEKSLKHDLREHSHIASGRAP*TYRPAV Trigger: GACTGCAGGCCTGTAGGTTCAGGGTGCCCGCCCTGA...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGGTGAAAGAGTGCCTTTaGCATCCTCAGTTCGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWVKECL*HPQFGE Trigger: TTCTCCGAACTGAGGATGCCAAAGGCACTCTTTCAC...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGTTCCGAACTTCTTGTTaGGAAAATGGTGCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWFRTSC*ENGAQP Trigger: AGGCTGTGCACCATTTTCTCAACAAGAAGTTCGGAA...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGTGCCAGTCTGTAAGATaGTGCCTCGTTCCAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRCQSVR*CLVPNP Trigger: AGGATTTGGAACGAGGCAGCATCTTACAGACTGGCA...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAAATTCCACATCCTTTTaGTGTCACAGGCAAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRNSTSF*CHRQTD Trigger: GTCAGTTTGCCTGTGACATCAAAAGGATGTGGAATT...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGTCTTTGGTCACCAGATaGACTTTACTGCTTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PSPLQAARTLFSLHLSRVSLVTR*TLLLGK Trigger: TTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGA...CACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | GTTTCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCACGATTGATAGGTGATTaGTCTCTTGTCTTTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSPSPLQAARTLFSLHLSRLIGD*SLVFKA Trigger: GGCCTTAAAGACAAGAGAGCAATCACCTATCAATCG...TGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGCTGACTCCTCTTCTTTaGTCACCAGATGAACTTTAC | + |
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Preference number: 4 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWLTPLL*SPDELY Trigger: GTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAG...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAATTGCTTTGCTTTATTaGCAGGATCATCCACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPSPLQAARTLFSLHLSRIALLY*QDHPRL Trigger: AAGACGTGGATGATCCTGTCAATAAAGCAAAGCAAT...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGTCTCTCTGTCAGGTTTaGAGAATCATTGAGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWSLCQV*RIIELI Trigger: AATCAGCTCAATGATTCTGCAAACCTGACAGAGAGA...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGATGAACTTTACTGCTTaGGAAATGCTTGTCCGCATC | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRMNFTA*EMLVRI Trigger: GATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCAT...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGCAGAGCCCTTCTCAATTTCTTCTTTaGTACTTTTCAACCTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: QDTVKSEEREPRSSRQSPSQFLL*YFSTSP Trigger: CGGAGAGGTTGAAAAGTATCAAAGAAGAAATTGAGA...AGGGCTCTGCCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGCAGAGCCCTCTACAGACCGAATATTaGACACATTCATTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QDTVKSEEREPRSSRQSPLQTEY*THSFSS Trigger: AGAAGAGAATGAATGTGTTCAATATTCGGTCTGTAG...AGGGCTCTGCCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTGAACTCGGGCATCAGTaGAAGAGTGCCTTTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLELGHQ*KSAFGI Trigger: GATGCCAAAGGCACTCTTTCACTGATGCCCGAGTTC...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGTTTACACTCACGGTTTaGTTTTACAACAACTTCACC | + |
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Preference number: 4 (lower is better) Translates to: PTSQDTVKSEEREPRSSRFTLTV*FYNNFT Trigger: GGTGAAGTTGTTGTAAAACCAAACCGTGAGTGTAAA...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGCAGAGCCCTGAGAAAGTATTGCTTTaGTTTATTGACAGGATCATC | + |
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Preference number: 4 (lower is better) Translates to: QDTVKSEEREPRSSRQSPEKVLL*FIDRII Trigger: GATGATCCTGTCAATAAAGCAAAGCAATACTTTCTC...AGGGCTCTGCCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTAATATACGCATGGAATaGGGGAAGGAGAACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLNIRME*GKENQA Trigger: GGCCTGGTTCTCCTTCCCCCATTCCATGCGTATATT...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTGGTTTGCAGAATCATTaGGCTGATTTCTCAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: TTGEKSLKHDLREHSHIAGLQNH*ADFSGA Trigger: GGCACCTGAGAAATCAGCTCAATGATTCTGCAAACC...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTCAGTCTGTAAGATGCTaGCTCGTTCCAAATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLQSVRC*LVPNPA Trigger: AGCAGGATTTGGAACGAGGCAGCATCTTACAGACTG...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTTTACTGCTTGGGAAATaGTTGTCCGCATCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLLLLGK*LSASSS Trigger: GGATGAAGATGCGGACAAGCATTTCCCAAGCAGTAA...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTTAACTTTGGCTTCTTaGCAGAATTGCTCGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TTGEKSLKHDLREHSHIALTLAS*QNCSVQ Trigger: CTGAACCGAGCAATTCTGTCAAGAAGCCAAAGTTAA...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR TCA 90 bp | GGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTTAAACTCTTACAGTTATGGCTaGGTCTGGGTTCCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: GEKSLKHDLREHSHIALNSYSYG*VWVPST Trigger: AGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGA...GTTTAAAGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTTTTTGTCAAGGATCTTaGCTAGGGACAATTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLFCQGS*LGTIQE Trigger: CTCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAA...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CCA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTCCAATTTGGTCCGTTTaGATTTTCTGTCCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: TTGEKSLKHDLREHSHIAPIWSV*IFCPFP Trigger: TGGGAAAGGACAGAAAATCCAAACGGACCAAATTGG...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR GCA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTGTTCGGAGAAAGTATTaGTTTGCTTTATTGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: TTGEKSLKHDLREHSHIAVRRKY*FALLTG Trigger: TCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAAC...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 90 bp | CCGGGTACGTTCAGCTTCAGGGCGGGCACCCTGAACCTACAGGCCTaGAGTCCGTCCCTGCTGAGGGCTTCTTGGTACCACCGCCCTACT | + |
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Preference number: 5 (lower is better) Translates to: PGTFSFRAGTLNLQA*SPSLLRASWYHRPT Trigger: AGTAGGGCGGTGGTACCAAGAAGCCCTCAGCAGGGACGGACTGCAGGCCTGTAGGTTCAGGGTGCCCGCCCTGAAGCTGAACGTACCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 90 bp | CCAGGCCCGGACACAGCCTTCCTCCGTCACTCCAAAGCGATGCAATaGCTCCAGCAGCGCACGCTCTCGAACCCGGAACTCGGGCATCAG | + |
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Preference number: 5 (lower is better) Translates to: PGPDTAFLRHSKAMQ*LQQRTLSNPELGHQ Trigger: CTGATGCCCGAGTTCCGGGTTCGAGAGCGTGCGCTGCTGGAGTCATTGCATCGCTTTGGAGTGACGGAGGAAGGCTGTGTCCGGGCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 90 bp | GAGAACCAGGCCCGGACACAGCCTTCCTCCGTCACTCCAAAGCGATaGAATGACTCCAGCAGCGCACGCTCTCGAACCCGGAACTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: ENQARTQPSSVTPKR*NDSSSARSRTRNSG Trigger: GCCCGAGTTCCGGGTTCGAGAGCGTGCGCTGCTGGAGTCATTGCATCGCTTTGGAGTGACGGAGGAAGGCTGTGTCCGGGCCTGGTTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 90 bp | TCAAGGTCGAAGGACAAGGACAGCGATGAGGCTGTATCATCGGAGTaGGGACCTTCCACTCGGGCCTCCTCGGTGGCGGGGTCAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: SRSKDKDSDEAVSSE*GPSTRASSVAGSGW Trigger: CCATCCTGACCCCGCCACCGAGGAGGCCCGAGTGGAAGGTCCCCACTCCGATGATACAGCCTCATCGCTGTCCTTGTCCTTCGACCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CAA 90 bp | TCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGACCTGCTGAGGGCTTCTaGGTACCACCGCCCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSPLQAARTLFSLHLSRPAEGF*VPPPYL Trigger: CAAGTAGGGCGGTGGTACCAAGAAGCCCTCAGCAGG...TCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | TGTCCGCATCTTCATCCGAGCAGATCAGGTCCCCCTCCACCACCTTaGGTCCATAGGCTGCCAGTCTGTAAGATGCTGCCTCGTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CPHLHPSRSGPPPPP*VHRLPVCKMLPRSK Trigger: TTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTGGTGGAGGGGGACCTGATCTGCTCGGATGAAGATGCGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | ATCCGAGCAGATCAGGTCCCCCTCCACCACCTTGGGTCCATAGGCTaGCAGTCTGTAAGATGCTGCCTCGTTCCAAATCCTGCTACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IRADQVPLHHLGSIG*QSVRCCLVPNPATV Trigger: TACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTGGTGGAGGGGGACCTGATCTGCTCGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | GGTGAGATCTCTTCCCGCGTGCTTTTTCCCGGAATCTTACAGTTATaGCTGAGTCTGGGTTCCCAGCACTGTGGTGCTGCCCGGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GEISSRVLFPGILQL*LSLGSQHCGAAREK Trigger: CTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATTCCGGGAAAAAGCACGCGGGAAGAGATCTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | CGTTCCAAATCCTGCTACTGTATGCGTGGATGTAGAATATACGCATaGAATGGGGGAAGGAGAACCAGGCCCGGACACAGCCTTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSKSCYCMRGCRIYA*NGGRRTRPGHSLPP Trigger: CGGAGGAAGGCTGTGTCCGGGCCTGGTTCTCCTTCCCCCATTCCATGCGTATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | TCCCGGAATCTTACAGTTATGGCTGAGTCTGGGTTCCCAGCACTGTaGTGCTGCCCGGGAAAAGATTTGGTTTCCACCAGGTTTCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRNLTVMAESGFPAL*CCPGKDLVSTRFPN Trigger: GTTCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATTCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | CCGACCTCTCAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGCCCAATTTGGTCCGTTaGGATTTTCTGTCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSQDTVKSEEREPRSSRPNLVR*DFLSFP Trigger: GGGAAAGGACAGAAAATCCAAACGGACCAAATTGGG...CCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTGAGAGGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS TCA 90 bp | AGATCTCTTCCCGCGTGCTTTTTCCCGGAATCTTACAGTTATGGCTaGGTCTGGGTTCCCAGCACTGTGGTGCTGCCCGGGAAAAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RSLPACFFPESYSYG*VWVPSTVVLPGKRF Trigger: AAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATTCCGGGAAAAAGCACGCGGGAAGAGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | CGGAATCTTACAGTTATGGCTGAGTCTGGGTTCCCAGCACTGTGGTaGTGCCCGGGAAAAGATTTGGTTTCCACCAGGTTTCCGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNLTVMAESGFPALW*CPGKDLVSTRFPNF Trigger: GAAGTTCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | CCCCTCCACCACCTTGGGTCCATAGGCTGCCAGTCTGTAAGATGCTaGCTCGTTCCAAATCCTGCTACTGTATGCGTGGATGTAGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: PLHHLGSIGCQSVRC*LVPNPATVCVDVEY Trigger: ATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTGGTGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | CCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGTTTGCGTCCAAATATTaGAAAAAGCCAAGAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPLQAARTLFSLHLSRVFASKY*KKPRAS Trigger: GGAGGCTCTTGGCTTTTTCAAATATTTGGACGCAAA...CACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS TCA 90 bp | TCCAAGCACGGGCAGAACTACCTGGTGCAGTGCATATGTGTGCGCTaGCTCCTCTTCTTTGGTCACCAGATGAACTTTACTGCTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKHGQNYLVQCICVR*LLFFGHQMNFTAWE Trigger: TTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAGCGCACACATATGCACTGCACCAGGTAGTTCTGCCCGTGCTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGTTAGAAGTCACACTGTaGACACTGTTTTCTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWLEVTL*TLFSFS Trigger: CGAGAAAGAAAACAGTGTCAACAGTGTGACTTCTAA...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | GTTTCGCCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCACTTTACACTCACGGTTaGGTTTTACAACAACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSPSPLQAARTLFSLHLSLYTHG*VLQQLH Trigger: GTGAAGTTGTTGTAAAACCAAACCGTGAGTGTAAAG...TGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGGCGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | CATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGGCCTACAGACCGAATATaGAACACATTCATTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HHLSKQRGRCSLSTSQEWPTDRI*NTFILF Trigger: GAAGAGAATGAATGTGTTCAATATTCGGTCTGTAGG...CCACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | CCATCACCTCTCCAAGCAGCGCGGACGCTGTTCTCTCTCCACCTCTCAAGAGTGAGTTCGGAGAAAGTATaGCTTTGCTTTATTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLQAARTLFSLHLSRVSSEKV*LCFIDR Trigger: CCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACT...CACTCTTGAGAGGTGGAGAGAGAACAGCGTCCGCGCTGCTTGGAGAGGTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | ACGACCGGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTGTACCACCGCCCTACTaGGTTCTCCGGGTACTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TTGEKSLKHDLREHSHIAVPPPY*VLRVLN Trigger: GTTCAGTACCCGGAGAACCAAGTAGGGCGGTGGTAC...AGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCCGGTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 90 bp | GCCCGGGAAAAGATTTGGTTTCCACCAGGTTTCCGAACTTCTTGTTaGGAAAATGGTGCACAGCCTTCCTGTGATCCTTGTTCGGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: AREKIWFPPGFRTSC*ENGAQPSCDPCSDP Trigger: CGGATCCGAACAAGGATCACAGGAAGGCTGTGCACCATTTTCTCAACAAGAAGTTCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 90 bp | AATCTTACAGTTATGGCTGAGTCTGGGTTCCCAGCACTGTGGTGCTaGCCGGGAAAAGATTTGGTTTCCACCAGGTTTCCGAACTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NLTVMAESGFPALWC*PGKDLVSTRFPNFL Trigger: CAAGAAGTTCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | GTCCATAGGCTGCCAGTCTGTAAGATGCTGCCTCGTTCCAAATCCTaGTACTGTATGCGTGGATGTAGAATATACGCATGGAATGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VHRLPVCKMLPRSKS*YCMRGCRIYAWNGG Trigger: TCCCCCATTCCATGCGTATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CAA 90 bp | CAGGACACTGTGAAAAGTGAGGAGCGAGAACCGCGAAGCTCAAGGCAGAGCCCTTATTGCTTTGCTTTATaGACAGGATCATCCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QDTVKSEEREPRSSRQSPYCFAL*TGSSTS Trigger: AGACGTGGATGATCCTGTCAATAAAGCAAAGCAATA...AGGGCTCTGCCTTGAGCTTCGCGGTTCTCGCTCCTCACTTTTCACAGTGTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | TGCCAGTCTGTAAGATGCTGCCTCGTTCCAAATCCTGCTACTGTATaGGTGGATGTAGAATATACGCATGGAATGGGGGAAGGAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: CQSVRCCLVPNPATV*VDVEYTHGMGEGEP Trigger: TGGTTCTCCTTCCCCCATTCCATGCGTATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | TCACAGCACTGTGCAGAACAGCTCTGCGGTTTTTGTCAAGGATCTTaGCTAGGGACAATTCAGGAGATGGCTCAGTTAATTCAGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQHCAEQLCGFCQGS*LGTIQEMAQLIQFV Trigger: CACAAACTGAATTAACTGAGCCATCTCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAAACCGCAGAGCTGTTCTGCACAGTGCTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | CTCCTCTTCCGACACCAGACGGCAGAGTTCTTTACACTCACGGTTTaGTTTTACAACAACTTCACCCTGGTTTCCTACGGTGATCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLFRHQTAEFFTLTV*FYNNFTLVSYGDQK Trigger: TTTTTGATCACCGTAGGAAACCAGGGTGAAGTTGTTGTAAAACCAAACCGTGAGTGTAAAGAACTCTGCCGTCTGGTGTCGGAAGAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CAA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTCGGCTAATAAGCCAATaGCTTCGAACGTCTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLRLISQ*LRTSPD Trigger: ATCTGGAGACGTTCGAAGCAATTGGCTTATTAGCCG...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CAA 90 bp | CTCCAAAGACCTAGAACTTTCACGACCGGAGAAAAATCCCTGAAGCATGACCTTGATGAACTTTACTGCTaGGGAAATGCTTGTCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRTFTTGEKSLKHDLDELYC*GNACPH Trigger: ATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCATC...AAGGTCATGCTTCAGGGATTTTTCTCCGGTCGTGAAAGTTCTAGGTCTTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 90 bp | TTTATGGCCTTCACCATCTCATTCTTCAGTAGAGCCAACCCAATTTaGTCCGTTTGGATTTTCTGTCCTTTCCCAAATCTCTGTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FMAFTISFFSRANPI*SVWIFCPFPNLCGP Trigger: TGGACCACAGAGATTTGGGAAAGGACAGAAAATCCAAACGGACCAAATTGGGTTGGCTCTACTGAAGAATGAGATGGTGAAGGCCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 90 bp | AGGTTTCCGAACTTCTTGTTGAGAAAATGGTGCACAGCCTTCCTGTaGTCCTTGTTCGGATCCGGCTTAAAGGTAAACTTGGAATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFPNFLLRKWCTAFL*SLFGSGLKVNLEFS Trigger: AGAAAATTCCAAGTTTACCTTTAAGCCGGATCCGAACAAGGATCACAGGAAGGCTGTGCACCATTTTCTCAACAAGAAGTTCGGAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 90 bp | ATCAGTGAAAGAGTGCCTTTGGCATCCTCAGTTCGGAGAAAGTATTaGTTTGCTTTATTGACAGGATCATCCACGTCTTCTGGTGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISERVPLASSVRRKY*FALLTGSSTSSGVR Trigger: TCTTACACCAGAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGCACTCTTTCACTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS-3UTR CAA 90 bp | GGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTTAAACTTTTTGTCAAGGATCTaGCCTAGGGACAATTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GEKSLKHDLREHSHIALNFLSRI*PRDNSG Trigger: TCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAAA...GTTTAAAGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTTAAACAGGTTTCCGAACTTCTaGTTGAGAAAATGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GEKSLKHDLREHSHIALNRFPNF*LRKWCT Trigger: TGTGCACCATTTTCTCAACAAGAAGTTCGGAAACCT...GTTTAAAGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS-3UTR CAA 90 bp | GGAGAAAAATCCCTGAAGCATGACCTTAGAGAGCACAGTCATATAGCTTTAAACGGAATAACACCAAGTTaGACGGCTAATAAGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GEKSLKHDLREHSHIALNGITPS*TANKPI Trigger: AATTGGCTTATTAGCCGTCAAACTTGGTGTTATTCC...GTTTAAAGCTATATGACTGTGCTCTCTAAGGTCATGCTTCAGGGATTTTTCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 90 bp | ATTCTTAACATTTTCTATTGCCTCCAAAATTCTCTCTGTCAGGTTTaGAGAATCATTGAGCTGATTTCTCAGGTGCCTGATGATAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILNIFYCLQNSLCQV*RIIELISQVPDDNF Trigger: GAAATTATCATCAGGCACCTGAGAAATCAGCTCAATGATTCTGCAAACCTGACAGAGAGAATTTTGGAGGCAATAGAAAATGTTAAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 72 bp | CCTTCCACTCGGGCCTCCTCGGTGGCGGGGTCAGGATaGACTAGTCGGTGTGACACGTTGCGGGGGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSTRASSVAGSG*TSRCDTLRGCF Trigger: GAAACACCCCCGCAACGTGTCACACCGACTAGTCCATCCTGACCCCGCCACCGAGGAGGCCCGAGTGGAAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 72 bp | AAGGACAAGGACAGCGATGAGGCTGTATCATCGGAGTaGGGACCTTCCACTCGGGCCTCCTCGGTGGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KDKDSDEAVSSE*GPSTRASSVAG Trigger: CCCCGCCACCGAGGAGGCCCGAGTGGAAGGTCCCCACTCCGATGATACAGCCTCATCGCTGTCCTTGTCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | TTCAGCTTCAGGGCGGGCACCCTGAACCTACAGGCCTaGAGTCCGTCCCTGCTGAGGGCTTCTTGGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: FSFRAGTLNLQA*SPSLLRASWYH Trigger: GTGGTACCAAGAAGCCCTCAGCAGGGACGGACTGCAGGCCTGTAGGTTCAGGGTGCCCGCCCTGAAGCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS TCA 72 bp | GACACAGCCTTCCTCCGTCACTCCAAAGCGATGCAATaGCTCCAGCAGCGCACGCTCTCGAACCCGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: DTAFLRHSKAMQ*LQQRTLSNPEL Trigger: GAGTTCCGGGTTCGAGAGCGTGCGCTGCTGGAGTCATTGCATCGCTTTGGAGTGACGGAGGAAGGCTGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CAA 90 bp | CTGCAGTCCGTCCCTGCTGAGGGCTTCTTGGTACCACCGCCCTACTaGGTTCTCCGGGTACTGAACGTTGTATCCAAGCACGGGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LQSVPAEGFLVPPPY*VLRVLNVVSKHGQN Trigger: GTTCTGCCCGTGCTTGGATACAACGTTCAGTACCCGGAGAACCAAGTAGGGCGGTGGTACCAAGAAGCCCTCAGCAGGGACGGACTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CAA 90 bp | CACCCTGAACCTACAGGCCTGCAGTCCGTCCCTGCTGAGGGCTTCTaGGTACCACCGCCCTACTTGGTTCTCCGGGTACTGAACGTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HPEPTGLQSVPAEGF*VPPPYLVLRVLNVV Trigger: TACAACGTTCAGTACCCGGAGAACCAAGTAGGGCGGTGGTACCAAGAAGCCCTCAGCAGGGACGGACTGCAGGCCTGTAGGTTCAGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS TCA 72 bp | CAGCGCACGCTCTCGAACCCGGAACTCGGGCATCAGTaGAAGAGTGCCTTTGGCATCCTCAGTTCGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QRTLSNPELGHQ*KSAFGILSSEK Trigger: TTTCTCCGAACTGAGGATGCCAAAGGCACTCTTTCACTGATGCCCGAGTTCCGGGTTCGAGAGCGTGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | GATCAGGTCCCCCTCCACCACCTTGGGTCCATAGGCTaGCAGTCTGTAAGATGCTGCCTCGTTCCAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: DQVPLHHLGSIG*QSVRCCLVPNP Trigger: AGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTGGTGGAGGGGGACCTGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS TCA 72 bp | TCTTGGTACCACCGCCCTACTTGGTTCTCCGGGTACTaGACGTTGTATCCAAGCACGGGCAGAACTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SWYHRPTWFSGY*TLYPSTGRTTW Trigger: CCAGGTAGTTCTGCCCGTGCTTGGATACAACGTTCAGTACCCGGAGAACCAAGTAGGGCGGTGGTACCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | GTTATGGCTGAGTCTGGGTTCCCAGCACTGTGGTGCTaGCCGGGAAAAGATTTGGTTTCCACCAGGTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VMAESGFPALWC*PGKDLVSTRFP Trigger: CGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 72 bp | TCTTCCCGCGTGCTTTTTCCCGGAATCTTACAGTTATaGCTGAGTCTGGGTTCCCAGCACTGTGGTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRVLFPGILQL*LSLGSQHCGAA Trigger: GGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGTAAGATTCCGGGAAAAAGCACGCGGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | CACCACCTTGGGTCCATAGGCTGCCAGTCTGTAAGATaGTGCCTCGTTCCAAATCCTGCTACTGTATGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HHLGSIGCQSVR*CLVPNPATVCV Trigger: CACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS CCA 72 bp | TCCTGCTACTGTATGCGTGGATGTAGAATATACGCATaGAATGGGGGAAGGAGAACCAGGCCCGGACACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCYCMRGCRIYA*NGGRRTRPGHS Trigger: GCTGTGTCCGGGCCTGGTTCTCCTTCCCCCATTCCATGCGTATATTCTACATCCACGCATACAGTAGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | ACAGTTATGGCTGAGTCTGGGTTCCCAGCACTGTGGTaGTGCCCGGGAAAAGATTTGGTTTCCACCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVMAESGFPALW*CPGKDLVSTRF Trigger: AAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGCCATAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
||
| CDS GCA 72 bp | CACCTTGGGTCCATAGGCTGCCAGTCTGTAAGATGCTaGCTCGTTCCAAATCCTGCTACTGTATGCGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLGSIGCQSVRC*LVPNPATVCVD Trigger: ATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAGCCTATGGACCCAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 90 bp | GCTGAGTCTGGGTTCCCAGCACTGTGGTGCTGCCCGGGAAAAGATTaGGTTTCCACCAGGTTTCCGAACTTCTTGTTGAGAAAATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: AESGFPALWCCPGKD*VSTRFPNFLLRKWC Trigger: GCACCATTTTCTCAACAAGAAGTTCGGAAACCTGGTGGAAACCAAATCTTTTCCCGGGCAGCACCACAGTGCTGGGAACCCAGACTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 72 bp | GGGCAGAACTACCTGGTGCAGTGCATATGTGTGCGCTaGCTCCTCTTCTTTGGTCACCAGATGAACTTTACT | + |
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Preference number: 6 (lower is better) Translates to: GQNYLVQCICVR*LLFFGHQMNFT Trigger: AGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAGCGCACACATATGCACTGCACCAGGTAGTTCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 72 bp | GAACCCGGAACTCGGGCATCAGTGAAAGAGTGCCTTTaGCATCCTCAGTTCGGAGAAAGTATTGCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: EPGTRASVKECL*HPQFGESIALL Trigger: AAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGCACTCTTTCACTGATGCCCGAGTTCCGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 72 bp | CCGACACCAGACGGCAGAGTTCTTTACACTCACGGTTaGGTTTTACAACAACTTCACCCTGGTTTCCTACGG | + |
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Preference number: 6 (lower is better) Translates to: PTPDGRVLYTHG*VLQQLHPGFLR Trigger: CCGTAGGAAACCAGGGTGAAGTTGTTGTAAAACCAAACCGTGAGTGTAAAGAACTCTGCCGTCTGGTGTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | CTGCCAGTCTGTAAGATGCTGCCTCGTTCCAAATCCTaGTACTGTATGCGTGGATGTAGAATATACGCATGG | + |
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Preference number: 6 (lower is better) Translates to: LPVCKMLPRSKS*YCMRGCRIYAW Trigger: CCATGCGTATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTACAGACTGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | CTGACTCCTCTTCTTTGGTCACCAGATGAACTTTACTaGTTGGGAAATGCTTGTCCGCATCTTCATCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: LTPLLWSPDELY*LGNACPHLHPS Trigger: GCTCGGATGAAGATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 72 bp | CGACACCAGACGGCAGAGTTCTTTACACTCACGGTTTaGTTTTACAACAACTTCACCCTGGTTTCCTACGGT | + |
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Preference number: 6 (lower is better) Translates to: RHQTAEFFTLTV*FYNNFTLVSYG Trigger: ACCGTAGGAAACCAGGGTGAAGTTGTTGTAAAACCAAACCGTGAGTGTAAAGAACTCTGCCGTCTGGTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 72 bp | GGTGCAGTGCATATGTGTGCGCTGACTCCTCTTCTTTaGTCACCAGATGAACTTTACTGCTTGGGAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: GAVHMCALTPLL*SPDELYCLGNA Trigger: AGCATTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAGCGCACACATATGCACTGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 90 bp | CTCACAGCACTGTGCAGAACAGCTCTGCGGTTTTTGTCAAGGATCTaGCCTAGGGACAATTCAGGAGATGGCTCAGTTAATTCAGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LTALCRTALRFLSRI*PRDNSGDGSVNSVC Trigger: ACAAACTGAATTAACTGAGCCATCTCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAAACCGCAGAGCTGTTCTGCACAGTGCTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 72 bp | TATGTGTGCGCTGACTCCTCTTCTTTGGTCACCAGATaGACTTTACTGCTTGGGAAATGCTTGTCCGCATCT | + |
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Preference number: 6 (lower is better) Translates to: YVCADSSSLVTR*TLLLGKCLSAS Trigger: AGATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGTCAGCGCACACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | GTAAGATGCTGCCTCGTTCCAAATCCTGCTACTGTATaGGTGGATGTAGAATATACGCATGGAATGGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VRCCLVPNPATV*VDVEYTHGMGE Trigger: TTCCCCCATTCCATGCGTATATTCTACATCCACGCATACAGTAGCAGGATTTGGAACGAGGCAGCATCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 72 bp | CTCCTCTTCTTTGGTCACCAGATGAACTTTACTGCTTaGGAAATGCTTGTCCGCATCTTCATCCGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LLFFGHQMNFTA*EMLVRIFIRAD Trigger: ATCTGCTCGGATGAAGATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 72 bp | CTGTGCAGAACAGCTCTGCGGTTTTTGTCAAGGATCTaGCCTAGGGACAATTCAGGAGATGGCTCAGTTAAT | + |
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Preference number: 6 (lower is better) Translates to: LCRTALRFLSRI*PRDNSGDGSVN Trigger: ATTAACTGAGCCATCTCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAAACCGCAGAGCTGTTCTGCACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 72 bp | ACTCCTCTTCTTTGGTCACCAGATGAACTTTACTGCTaGGGAAATGCTTGTCCGCATCTTCATCCGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TPLLWSPDELYC*GNACPHLHPSR Trigger: TCTGCTCGGATGAAGATGCGGACAAGCATTTCCCAAGCAGTAAAGTTCATCTGGTGACCAAAGAAGAGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | TGTGCAGAACAGCTCTGCGGTTTTTGTCAAGGATCTTaGCTAGGGACAATTCAGGAGATGGCTCAGTTAATT | + |
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Preference number: 6 (lower is better) Translates to: CAEQLCGFCQGS*LGTIQEMAQLI Trigger: AATTAACTGAGCCATCTCCTGAATTGTCCCTAGGCAAGATCCTTGACAAAAACCGCAGAGCTGTTCTGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | GCCTTTGGCATCCTCAGTTCGGAGAAAGTATTGCTTTaGTTTATTGACAGGATCATCCACGTCTTCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AFGILSSEKVLL*FIDRIIHVFWC Trigger: ACACCAGAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS TCA 72 bp | AAGATTTGGTTTCCACCAGGTTTCCGAACTTCTTGTTaGGAAAATGGTGCACAGCCTTCCTGTGATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: KIWFPPGFRTSC*ENGAQPSCDPC Trigger: ACAAGGATCACAGGAAGGCTGTGCACCATTTTCTCAACAAGAAGTTCGGAAACCTGGTGGAAACCAAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS GCA 72 bp | AGAGTGCCTTTGGCATCCTCAGTTCGGAGAAAGTATTaGTTTGCTTTATTGACAGGATCATCCACGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RVPLASSVRRKY*FALLTGSSTSS Trigger: AGAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGCACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 72 bp | AAGAGTGCCTTTGGCATCCTCAGTTCGGAGAAAGTATaGCTTTGCTTTATTGACAGGATCATCCACGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: KSAFGILSSEKV*LCFIDRIIHVF Trigger: GAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGCACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CCA 72 bp | TTCACCATCTCATTCTTCAGTAGAGCCAACCCAATTTaGTCCGTTTGGATTTTCTGTCCTTTCCCAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: FTISFFSRANPI*SVWIFCPFPNL Trigger: GAGATTTGGGAAAGGACAGAAAATCCAAACGGACCAAATTGGGTTGGCTCTACTGAAGAATGAGATGGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 72 bp | GCATCCTCAGTTCGGAGAAAGTATTGCTTTGCTTTATaGACAGGATCATCCACGTCTTCTGGTGTAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: ASSVRRKYCFAL*TGSSTSSGVRN Trigger: ATTTCTTACACCAGAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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| CDS CAA 90 bp | GTGCCTTTGGCATCCTCAGTTCGGAGAAAGTATTGCTTTGCTTTATaGACAGGATCATCCACGTCTTCTGGTGTAAGAAATAATTTTATG | + |
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Preference number: 6 (lower is better) Translates to: VPLASSVRRKYCFAL*TGSSTSSGVRNNFM Trigger: CATAAAATTATTTCTTACACCAGAAGACGTGGATGATCCTGTCAATAAAGCAAAGCAATACTTTCTCCGAACTGAGGATGCCAAAGGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049151.4 |
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