Pregenerated sensors for PUS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032103Ensembl transcript IDs: ENSMUST00000034615.10, ENSMUST00000121246.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTTTTATTTCTTCCTTATGGAGTAAATGTGGGTGCTCAATTCTaGCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: WLLFLPYGVNVGAQF*LYSQNAGSGIPVLG Trigger: GCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATTGAGCACCCACATTTACTCCATAAGGAAGAAATAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR GCA 90 bp | CAGTCCCTTCTGGCTTTTATTTCTTCCTTATGGAGTAAATGTGGGTaGTCAATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCC | + |
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Preference number: 1 (lower is better) Translates to: QSLLAFISSLWSKCG*SILPLLTKCRIRDS Trigger: GGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATTGAGCACCCACATTTACTCCATAAGGAAGAAATAAAAGCCAGAAGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGGGGCTTATATGTGCGCAATCAAGACATGGGCTaGTGGGAGCTCCCCATCATA | + |
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Preference number: 2 (lower is better) Translates to: RDSSPWHLGRSMRGLYVRNQDMG*WELPII Trigger: TATGATGGGGAGCTCCCATCAGCCCATGTCTTGATT...GCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGGGGCTTATATGTGCGCTATAATTTCAGAAGCTaGGAATTAGGAGCCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RDSSPWHLGRSMRGLYVRYNFRS*ELGAQS Trigger: GGACTGGGCTCCTAATTCCCAGCTTCTGAAATTATA...GCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR CAA 90 bp | AATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTaGGCACTTGGGACGATCCATGAGGGGCTTATATGTGCGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: NSASTHKMPDPGFQS*ALGTIHEGLICAHF Trigger: AAAATGCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGGGGCTTATATGTGCGCATCCAGATTTGTTCATaGCATTCTCACAACCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RDSSPWHLGRSMRGLYVRIQICS*HSHNLF Trigger: AAAGAGGTTGTGAGAATGTCATGAACAAATCTGGAT...GCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTACAAAGGCACTCGTGTGCTTTATGACAGGGGGTTGAATGTTTCTCCATTCATCCATCTTTGTTCCTaGTGCACATGTTACCATAAC | + |
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Preference number: 2 (lower is better) Translates to: FYKGTRVLYDRGLNVSPFIHLCS*CTCYHN Trigger: GTTATGGTAACATGTGCAGCAGGAACAAAGATGGAT...GAATGGAGAAACATTCAACCCCCTGTCATAAAGCACACGAGTGCCTTTGTAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR CCA 90 bp | AATATACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCACTGGTTATTGCTCCCTaGATCCTGTTAGAGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: NILVDQTLMDLNTRHGFPLVIAP*ILLEML Trigger: TAGCATCTCTAACAGGATCCAGGGAGCAATAACCAG...TGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR-3UTR GCA 90 bp | AATATACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCACTGACAAGTGCTTTTTaGGTCTTTCATTTCATCACT | + |
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Preference number: 2 (lower is better) Translates to: NILVDQTLMDLNTRHGFPLTSAF*VFHFIT Trigger: AGTGATGAAATGAAAGACGCAAAAAGCACTTGTCAG...TGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGTATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR CCA 72 bp | CTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTaGCACTTGGGACGATCCATGAGGGGCTTATATGTG | + |
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Preference number: 3 (lower is better) Translates to: LLTKCRIRDSSP*HLGRSMRGLYV Trigger: CACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR TCA 72 bp | TCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCATaGGGGGCTTATATGTGCGCATTTTCACTCCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SGIPVLGTWDDP*GAYMCAFSLLL Trigger: TAGAAGGAGTGAAAATGCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR GCA 72 bp | AAATGTGGGTGCTCAATTCTGCCTCTACTCACAAAATaGCGGATCCGGGATTCCAGTCCTTGGCACTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: KCGCSILPLLTK*RIRDSSPWHLG Trigger: TCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATTGAGCACCCACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR CAA 90 bp | CACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGTTGCTTCATCCATCTTaGTTCCTGCTGCACATGTTA | + |
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Preference number: 3 (lower is better) Translates to: HKMPDPGFQSLALGTIHELLHPS*FLLHML Trigger: TAACATGTGCAGCAGGAACAAAGATGGATGAAGCAA...CTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR CAA 90 bp | TACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCACTTTATGACAGGGGGTaGAATGTTTCTCCATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: YSQNAGSGIPVLGTWDDPLYDRG*NVSPFC Trigger: ACAGAATGGAGAAACATTCAACCCCCTGTCATAAAG...TGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCATTCTGTTGCTTCATCCATCTTTGTTCCTGCTGCACATGTTACCATAACAAGCTTACAGGGAAAGTaGGGGAGATGGTTAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: LHSVASSIFVPAAHVTITSLQGK*GRWLGG Trigger: ACCACCTAACCATCTCCCCAACTTTCCCTGTAAGCT...TGTTATGGTAACATGTGCAGCAGGAACAAAGATGGATGAAGCAACAGAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR GCA 72 bp | GGCCCTTTTGCCATCATTAGAATTTTAACTGGTTATTaGTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: GPFAIIRILTGY*SLDPVRDARLP Trigger: AGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAATTCTAATGATGGCAAAAGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR GCA 72 bp | CAAGGCACGGATTTCCAGGTGCATATAACTGACAAGTaGTTTTTGCGTCTTTCATTTCATCACTCTTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: QGTDFQVHITDK*FLRLSFHHSFG Trigger: TCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCACTTGTCAGTTATATGCACCTGGAAATCCGTGCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR TCA 72 bp | GTTGGGGAGATGGTTAGGTGGTTTTACAGTCATTGGTaGATAATTTCAATAATGGGAGGGACAAGGATATAC | + |
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Preference number: 3 (lower is better) Translates to: VGEMVRWFYSHW*IISIMGGTRIY Trigger: GTATATCCTTGTCCCTCCCATTATTGAAATTATTCACCAATGACTGTAAAACCACCTAACCATCTCCCCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR TCA 72 bp | CCAGAAAATTTAAAACAGTTGATCCAGATTTGTTCATaGCATTCTCACAACCTCTTTAGCCACAGCCTATTC | + |
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Preference number: 3 (lower is better) Translates to: PENLKQLIQICS*HSHNLFSHSLF Trigger: GAATAGGCTGTGGCTAAAGAGGTTGTGAGAATGTCATGAACAAATCTGGATCAACTGTTTTAAATTTTCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR CAA 72 bp | ACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTaGGGACGATCCATGAGGGGCTTATATGTGCGCATT | + |
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Preference number: 4 (lower is better) Translates to: TKCRIRDSSPWH*GRSMRGLYVRI Trigger: AATGCGCACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR GCA 90 bp | CACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGAGTTGGATGTCTGTCTaGTTTCTACTAGTCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HKMPDPGFQSLALGTIHESWMSV*FLLVGS Trigger: AGACCCGACTAGTAGAAAGCAGACAGACATCCAACT...CTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CCA 90 bp | TACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCAGGCTTCTCCATTCCTTaGCCAATCAGGAAGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: YSQNAGSGIPVLGTWDDPGFSIP*PIRKRI Trigger: TATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCC...TGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| 3UTR CAA 72 bp | TCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTaGGCACTTGGGACGATCCATGAGGGGCTTATATGT | + |
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Preference number: 4 (lower is better) Translates to: STHKMPDPGFQS*ALGTIHEGLIC Trigger: ACATATAAGCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CCA 90 bp | GCTCAATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCTTCATCAATAATCTCTaGCTTCTCCATTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: AQFCLYSQNAGSGIPVLGFINNL*LLHSLA Trigger: GGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAA...GCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR TCA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGACTTGGGACGATCCATaGGGGGCTTATATGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: ILTGYCSLDPVRDARLPRTWDDP*GAYMCA Trigger: TGCGCACATATAAGCCCCTCATGGATCGTCCCAAGT...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR GCA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGCCTCTACTCACAAAATaGCGGATCCGGGATTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: ILTGYCSLDPVRDARLPRPLLTK*RIRDSS Trigger: ACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGG...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | GCTCAATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCGAGCTGCATAATTCATaGTTGCAATATCTAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: AQFCLYSQNAGSGIPVLGELHNS*LQYLNP Trigger: CGGATTTAGATATTGCAACCATGAATTATGCAGCTC...GCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCATACAATACTCGGATGTCTaGAGGAAGCACCCGATTGAG | + |
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Preference number: 4 (lower is better) Translates to: CRPDFNGFEHKARISRCIQYSDV*RKHPIE Trigger: CTCAATCGGGTGCTTCCTGCAGACATCCGAGTATTG...TATGCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | AATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTCACACCTATGATAGTTaGATGTCTGTCTGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: NSASTHKMPDPGFQSLALHTYDS*MSVCFL Trigger: TAGAAAGCAGACAGACATCCAACTATCATAGGTGTG...AAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR TCA 90 bp | TGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCATATTGCTTGTGTTTTCCTaGCTGGCAAAGCCCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: CRPDFNGFEHKARISRCILLVFS*LAKPWY Trigger: ATACCAGGGCTTTGCCAGTCAGGAAAACACAAGCAA...TATGCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCTCCTCGCCTGGGCTCTaGGCCACTAGTTGTACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LFASFISSLFWTGIREYISSPGL*ATSCTC Trigger: ACAAGTACAACTAGTGGCCCAGAGCCCAGGCGAGGA...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCCGGGATTCCAGTCCTTaGCACTTGGGACGATCCATG | + |
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Preference number: 4 (lower is better) Translates to: LFASFISSLFWTGIREYIRDSSP*HLGRSM Trigger: CATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCG...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR TCA 90 bp | ATGCTAAGGAGAAACAAGGGTAAGAATACACAGCAGTTAGCCAATGGTTCTTTCTTGCTTGTGTTTTCCTaGCTGGCAAAGCCCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: MLRRNKGKNTQQLANGSFLLVFS*LAKPWY Trigger: ATACCAGGGCTTTGCCAGTCAGGAAAACACAAGCAA...GAAAGAACCATTGGCTAACTGCTGTGTATTCTTACCCTTGTTTCTCCTTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR GCA 90 bp | GTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACGTGGGTGCTCAATTCTaGCTCTACTCACAAAATGCC | + |
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Preference number: 4 (lower is better) Translates to: VLFASFISSLFWTGIREYVGAQF*LYSQNA Trigger: GGCATTTTGTGAGTAGAGGCAGAATTGAGCACCCAC...GTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR CAA 72 bp | ACGGATTTCCAGGTGCATATAACTGACAAGTGCTTTTaGCGTCTTTCATTTCATCACTCTTTTGGACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: TDFQVHITDKCF*RLSFHHSFGQG Trigger: TCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCACTTGTCAGTTATATGCACCTGGAAATCCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR TCA 90 bp | CTACAAATTATAAGCTTACAGGGAAAGTTGGGGAGATGGTTAGGTGGTTTTACAACATGTCTACGGCCATaGGCACTGAAATCAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LQIISLQGKLGRWLGGFTTCLRP*ALKSKA Trigger: TGCTTTTGATTTCAGTGCTCATGGCCGTAGACATGT...TGTAAAACCACCTAACCATCTCCCCAACTTTCCCTGTAAGCTTATAATTTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR TCA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGCACAGAATAGTCCTCTaGAAATTAATCACTCCATTG | + |
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Preference number: 4 (lower is better) Translates to: ILTGYCSLDPVRDARLPRHRIVL*KLITPL Trigger: CAATGGAGTGATTAATTTTCAGAGGACTATTCTGTG...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR TCA 90 bp | TTACTCCTACCCTTACTAAAAAGTTTCTCTGCCTCTGTACTTAGCTGCCTCGTTTTTATGACAGGGGGTTaGATGTTTCTCCATTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLLPLLKSFSASVLSCLVFMTGG*MFLHSV Trigger: AACAGAATGGAGAAACATTCAACCCCCTGTCATAAA...AACGAGGCAGCTAAGTACAGAGGCAGAGAAACTTTTTAGTAAGGGTAGGAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGGAGCTGCATAATTCATaGTTGCAATATCTAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: ILTGYCSLDPVRDARLPRELHNS*LQYLNP Trigger: CGGATTTAGATATTGCAACCATGAATTATGCAGCTC...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCGGCTTCTCCATTCCTTaGCCAATCAGGAAGAGGATA | + |
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Preference number: 4 (lower is better) Translates to: LFASFISSLFWTGIREYIGFSIP*PIRKRI Trigger: TATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCC...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR TCA 90 bp | AATATACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAACATGTCTACGGCCATaGGCACTGAAATCAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NILVDQTLMDLNTRHGFPTCLRP*ALKSKA Trigger: TGCTTTTGATTTCAGTGCTCATGGCCGTAGACATGT...TGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGTATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR GCA 90 bp | GGCACGGATTTCCAGGTGCATATAACTGACAAGTGCTTTTTGCGTCTTTCATTTTCTCTTCAATTGTATTaGTTGTGTTTTCCTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GTDFQVHITDKCFLRLSFSLQLY*LCFPDW Trigger: CCAGTCAGGAAAACACAAGCAATACAATTGAAGAGA...AAATGAAAGACGCAAAAAGCACTTGTCAGTTATATGCACCTGGAAATCCGTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR GCA 90 bp | CTCCATTCTGTTGCTTCATCCATCTTTGTTCCTGCTGCACATGTTACCATAACATCTCTTCAATTGTATTaGTTGTGTTTTCCTGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LHSVASSIFVPAAHVTITSLQLY*LCFPDW Trigger: CCAGTCAGGAAAACACAAGCAATACAATTGAAGAGA...TGTTATGGTAACATGTGCAGCAGGAACAAAGATGGATGAAGCAACAGAATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR GCA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCAGTTGGATGTCTGTCTaGTTTCTACTAGTCGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LFASFISSLFWTGIREYISWMSV*FLLVGS Trigger: AGACCCGACTAGTAGAAAGCAGACAGACATCCAACT...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | CAAGTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATTCATCAATAATCTCTaGCTTCTCCATTCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QVLFASFISSLFWTGIREFINNL*LLHSLA Trigger: GGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAA...TTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGACAAACCCTCTTACTTaGATTCTCTACAACAGTATT | + |
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Preference number: 4 (lower is better) Translates to: ILTGYCSLDPVRDARLPRTNPLT*ILYNSI Trigger: AATACTGTTGTAGAGAATCCAAGTAAGAGGGTTTGT...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR TCA 90 bp | AATATACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAACAGCCATGCTATATTaGGGTTTCTGGGGATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NILVDQTLMDLNTRHGFPTAMLY*GFWGFF Trigger: GAAAAATCCCCAGAAACCTCAATATAGCATGGCTGT...TGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGTATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR GCA 90 bp | CAAGTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAAACAGAGTCTAGACCTTaGAGCATACTATATAGCATG | + |
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Preference number: 4 (lower is better) Translates to: QVLFASFISSLFWTGIRETESRP*SILYSM Trigger: CATGCTATATAGTATGCTGCAAGGTCTAGACTCTGT...TTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR GCA 90 bp | GTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCCATCTTTGTTCCTaGTGCACATGTTACCATAAC | + |
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Preference number: 4 (lower is better) Translates to: VLFASFISSLFWTGIREYIHLCS*CTCYHN Trigger: GTTATGGTAACATGTGCAGCAGGAACAAAGATGGAT...GTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | GTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACCACACCTATGATAGTTaGATGTCTGTCTGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: VLFASFISSLFWTGIREYHTYDS*MSVCFL Trigger: TAGAAAGCAGACAGACATCCAACTATCATAGGTGTG...GTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CCA 90 bp | GTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACCAGCACAGTCCCTTCTaGCTTTTATTTCTTCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: VLFASFISSLFWTGIREYQHSPF*LLFLPY Trigger: ATAAGGAAGAAATAAAAGCCAGAAGGGACTGTGCTG...GTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| 3UTR CAA 72 bp | AGAACAAATATACTTGTAGACCAGACTTTAATGGATTaGAACACAAGGCACGGATTTCCAGGTGCATATAAC | + |
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Preference number: 4 (lower is better) Translates to: RTNILVDQTLMD*NTRHGFPGAYN Trigger: GTTATATGCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGTATATTTGTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | ACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCTCCAGTCCTTGGCACTaGGGACGATCCATGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TCRPDFNGFEHKARISRCSSPWH*GRSMRG Trigger: GCCCCTCATGGATCGTCCCAAGTGCCAAGGACTGGA...GCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS GCA 90 bp | ACTGAAGCTAGGTTCTACAGGGGCCCAGGCCAATACTCGGATGTCTaGAGGAAGCACCCGATTGAGAATGTGAGTATAACGGATCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TEARFYRGPGQYSDV*RKHPIENVSITDLF Trigger: AAAGAGATCCGTTATACTCACATTCTCAATCGGGTGCTTCCTGCAGACATCCGAGTATTGGCCTGGGCCCCTGTAGAACCTAGCTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS-3UTR CAA 90 bp | AATTCTGCCTCTACTCACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTTGGCTTCTCCATTCCTaGGCCAATCAGGAAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: NSASTHKMPDPGFQSLALWLLHS*ANQEED Trigger: ATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCCA...AAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTGAGTAGAGGCAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CAA 90 bp | CACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGCTTCAATTGTATTGCTaGTGTTTTCCTGACTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: HKMPDPGFQSLALGTIHELQLYC*CFPDWQ Trigger: TTGCCAGTCAGGAAAACACAAGCAATACAATTGAAG...CTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CAA 90 bp | CACAAAATGCCGGATCCGGGATTCCAGTCCTTGGCACTTGGGACGATCCATGAGCTGCATAATTCATGGTaGCAATATCTAAATCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: HKMPDPGFQSLALGTIHELHNSW*QYLNPH Trigger: GTGCGGATTTAGATATTGCAACCATGAATTATGCAG...CTCATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGGATCCGGCATTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CAA 90 bp | ACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCCTGAATCCCTGCTCGTaGGAAACTGAGAACGTAGGT | + |
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Preference number: 5 (lower is better) Translates to: TCRPDFNGFEHKARISRCLNPCS*ETENVG Trigger: ACCTACGTTCTCAGTTTCCAACGAGCAGGGATTCAG...GCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | ACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCAAGGCACTAACACCTTaGTCTGTTCGACCACACCTA | + |
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Preference number: 5 (lower is better) Translates to: TCRPDFNGFEHKARISRCKALTP*SVRPHL Trigger: TAGGTGTGGTCGAACAGACAAAGGTGTTAGTGCCTT...GCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | GGCACGGATTTCCAGGTGCATATAACTGACAAGTGCTTTTTGCGTCTTTCATTTTGGCTTCTCCATTCCTaGGCCAATCAGGAAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: GTDFQVHITDKCFLRLSFWLLHS*ANQEED Trigger: ATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCCA...AAATGAAAGACGCAAAAAGCACTTGTCAGTTATATGCACCTGGAAATCCGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCCCGGGATTCCAGTCCTaGGCACTTGGGACGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: LFASFISSLFWTGIREYIPGFQS*ALGTIH Trigger: ATGGATCGTCCCAAGTGCCAAGGACTGGAATCCCGG...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGTTGCTTCATCCATCTTaGTTCCTGCTGCACATGTTA | + |
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Preference number: 5 (lower is better) Translates to: ILTGYCSLDPVRDARLPRLLHPS*FLLHML Trigger: TAACATGTGCAGCAGGAACAAAGATGGATGAAGCAA...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | CTACAAATTATAAGCTTACAGGGAAAGTTGGGGAGATGGTTAGGTGGTTTTACAAAGGCACTAACACCTTaGTCTGTTCGACCACACCTA | + |
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Preference number: 5 (lower is better) Translates to: LQIISLQGKLGRWLGGFTKALTP*SVRPHL Trigger: TAGGTGTGGTCGAACAGACAAAGGTGTTAGTGCCTT...TGTAAAACCACCTAACCATCTCCCCAACTTTCCCTGTAAGCTTATAATTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121246.2 |
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| CDS-3UTR CAA 90 bp | ACTTGTAGACCAGACTTTAATGGATTTGAACACAAGGCACGGATTTCCAGGTGCCTGCATAATTCATGGTaGCAATATCTAAATCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: TCRPDFNGFEHKARISRCLHNSW*QYLNPH Trigger: GTGCGGATTTAGATATTGCAACCATGAATTATGCAG...GCACCTGGAAATCCGTGCCTTGTGTTCAAATCCATTAAAGTCTGGTCTACAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGTGTTTCTCCATTCTGTaGCTTCATCCATCTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: ILTGYCSLDPVRDARLPRCFSIL*LHPSLF Trigger: GAACAAAGATGGATGAAGCAACAGAATGGAGAAACA...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | ATTTTAACTGGTTATTGCTCCCTGGATCCTGTTAGAGATGCTAGGCTTCCTAGGTACAAACCCTCTTACTaGGATTCTCTACAACAGTAT | + |
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Preference number: 5 (lower is better) Translates to: ILTGYCSLDPVRDARLPRYKPSY*DSLQQY Trigger: ATACTGTTGTAGAGAATCCAAGTAAGAGGGTTTGTA...CCTAGGAAGCCTAGCATCTCTAACAGGATCCAGGGAGCAATAACCAGTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | CAAGTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAACTTTATGACAGGGGGTaGAATGTTTCTCCATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: QVLFASFISSLFWTGIRELYDRG*NVSPFC Trigger: ACAGAATGGAGAAACATTCAACCCCCTGTCATAAAG...TTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | GTGCTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACCTTCAATTGTATTGCTaGTGTTTTCCTGACTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: VLFASFISSLFWTGIREYLQLYC*CFPDWQ Trigger: TTGCCAGTCAGGAAAACACAAGCAATACAATTGAAG...GTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAGCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS-3UTR CAA 90 bp | CTTTTTGCGTCTTTCATTTCATCACTCTTTTGGACAGGGATTAGAGAATACATCACAGTATTTTCTTCTTaGTCAGCACAGTCCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LFASFISSLFWTGIREYITVFSS*SAQSLL Trigger: CAGAAGGGACTGTGCTGACAAAGAAGAAAATACTGT...GATGTATTCTCTAATCCCTGTCCAAAAGAGTGATGAAATGAAAGACGCAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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| CDS GCA 72 bp | AGGTTCTACAGGGGCCCAGGCCAATACTCGGATGTCTaGAGGAAGCACCCGATTGAGAATGTGAGTATAACG | + |
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Preference number: 6 (lower is better) Translates to: RFYRGPGQYSDV*RKHPIENVSIT Trigger: CGTTATACTCACATTCTCAATCGGGTGCTTCCTGCAGACATCCGAGTATTGGCCTGGGCCCCTGTAGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS CAA 72 bp | CAGCAATTCATCAATAATCTCTGGCTTCTCCATTCCTaGGCCAATCAGGAAGAGGATAGCCATCATACACCG | + |
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Preference number: 6 (lower is better) Translates to: QQFINNLWLLHS*ANQEEDSHHTP Trigger: CGGTGTATGATGGCTATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAATTGCTG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS CCA 72 bp | AGCAATTCATCAATAATCTCTGGCTTCTCCATTCCTTaGCCAATCAGGAAGAGGATAGCCATCATACACCGA | + |
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Preference number: 6 (lower is better) Translates to: SNSSIISGFSIP*PIRKRIAIIHR Trigger: TCGGTGTATGATGGCTATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAATTGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS CAA 72 bp | GCCAATCAGGAAGAGGATAGCCATCATACACCGAACTaGATGGTACAAGAATGCCTGGCCAATTACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: ANQEEDSHHTPN*MVQECLANYFK Trigger: TTTGAAGTAATTGGCCAGGCATTCTTGTACCATCAAGTTCGGTGTATGATGGCTATCCTCTTCCTGATTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS CAA 90 bp | CTGTATGTTCAGCAATTCATCAATAATCTCTGGCTTCTCCATTCCTaGGCCAATCAGGAAGAGGATAGCCATCATACACCGAACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LYVQQFINNLWLLHS*ANQEEDSHHTPNLM Trigger: CATCAAGTTCGGTGTATGATGGCTATCCTCTTCCTGATTGGCCAAGGAATGGAGAAGCCAGAGATTATTGATGAATTGCTGAACATACAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS TCA 72 bp | CCAATCAGGAAGAGGATAGCCATCATACACCGAACTTaGTGGTACAAGAATGCCTGGCCAATTACTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: PIRKRIAIIHRT*WYKNAWPITSN Trigger: ATTTGAAGTAATTGGCCAGGCATTCTTGTACCATCAAGTTCGGTGTATGATGGCTATCCTCTTCCTGATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS TCA 72 bp | GCCACTAGTTGTACTTGTGCACACAGAATAGTCCTCTaGAAATTAATCACTCCATTGGCTACATCCATTTTA | + |
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Preference number: 6 (lower is better) Translates to: ATSCTCAHRIVL*KLITPLATSIL Trigger: TAAAATGGATGTAGCCAATGGAGTGATTAATTTTCAGAGGACTATTCTGTGTGCACAAGTACAACTAGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034615.10 ENSMUST00000121246.2 |
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| CDS CAA 90 bp | ATACAAACCCTCTTACTTGGATTCTCTACAACAGTATTTTCTTCTTaGTCAGCACAGTCCCTTCTGGCTTTTATTTCTTCCTTATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: IQTLLLGFSTTVFSS*SAQSLLAFISSLWS Trigger: ACTCCATAAGGAAGAAATAAAAGCCAGAAGGGACTGTGCTGACAAAGAAGAAAATACTGTTGTAGAGAATCCAAGTAAGAGGGTTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034615.10 |
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