Pregenerated sensors for PUS10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020280Ensembl transcript IDs: ENSMUST00000020520.11, ENSMUST00000058163.11, ENSMUST00000109525.8, ENSMUST00000143117.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTaGCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACA | + |
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Preference number: 1 (lower is better) Translates to: EDTVMVGKQSFSRIC*LYVHIMPGKPFVFT Trigger: TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR GCA 90 bp | TTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATaGTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: FEDTVMVGKQSFSRI*CLYVHIMPGKPFVF Trigger: GAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR TCA 90 bp | ACACAACACAAAATATGCGTACAAATAGATCCTGAGATGTTACAGTaGACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: TQHKICVQIDPEMLQ*TLGTDQHDPSGFED Trigger: GTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGTTCACTGTAACATCTCAGGATCTATTTGTACGCATATTTTGTGTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR-3UTR GCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTTTTTCCAGGATATGCTaGCTGTATGTCCACATCATG | + |
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Preference number: 2 (lower is better) Translates to: QINMIQVVLKTPLWWVNSFSRIC*LYVHIM Trigger: CATGATGTGGACATACAGGCAGCATATCCTGGAAAA...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGTCATTTTCCAGGATATaGTGCCTGTATGTCCACATC | + |
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Preference number: 2 (lower is better) Translates to: TLGTDQHDPSGFEDTVMVSFSRI*CLYVHI Trigger: GATGTGGACATACAGGCAGCATATCCTGGAAAATGA...CACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATAGTTCATTCCTTCTATTTTaGTTTTGTGGTCATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: CHLLCRRHILTIFDCQNSSFLLF*FCGHET Trigger: TGTCTCATGACCACAAAACCAAAATAGAAGGAATGA...ACTATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR GCA 72 bp | GTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTaGCTGTATGTCCACATCATGCCAGGAAAGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: VMVGKQSFSRIC*LYVHIMPGKPF Trigger: AAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR GCA 72 bp | TCACACATGATGAAACAAGGTTTCAAAGGAGCAGGCTaGCCTTTCATCGCAATCAAAAACATCTTCCTGATA | + |
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Preference number: 3 (lower is better) Translates to: SHMMKQGFKGAG*PFIAIKNIFLI Trigger: TATCAGGAAGATGTTTTTGATTGCGATGAAAGGGCAGCCTGCTCCTTTGAAACCTTGTTTCATCATGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| 3UTR TCA 72 bp | CACAACACAACACAAAATATGCGTACAAATAGATCCTaGGATGTTACAGTGAACTTTAGGAACAGATCAACA | + |
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Preference number: 3 (lower is better) Translates to: HNTTQNMRTNRS*DVTVNFRNRST Trigger: TGTTGATCTGTTCCTAAAGTTCACTGTAACATCTCAGGATCTATTTGTACGCATATTTTGTGTTGTGTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGGACTATTGCCTCCCTGGTaGCAAGCTGCAAGTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: AACMSTSCQESLLCSHVGLLPPW*QAASHG Trigger: TCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAG...TCCCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGGATCCCTGGTGACAAGCTaGAAGTCACGGACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AACMSTSCQESLLCSHVGSLVTS*KSRTWI Trigger: AATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGA...TCCCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGGACTTCATATGCCCTATTaGCTCCCTGGTGACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AACMSTSCQESLLCSHVGLHMPY*LPGDKL Trigger: CAGCTTGTCACCAGGGAGGCAATAGGGCATATGAAG...TCCCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGAGCAACCATGCAGCATaGTCTCTTACAGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: MLPVCPHHARKAFCVHTWSNHAA*SLTDSC Trigger: GCAGCTGTCTGTAAGAGAGCATGCTGCATGGTTGCT...CCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGTCACCTTCCTTCATATaGCCTATTGCCTCCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: MLPVCPHHARKAFCVHTWSPSFI*PIASLV Trigger: CACCAGGGAGGCAATAGGGCATATGAAGGAAGGTGA...CCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGAGCTCTTTCCATCAGTaGGAACGCCCAGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSRICCLYVHIMPGKPFVSSFHQ*ERPAPL Trigger: CAGAGGAGCTGGGCGTTCCCACTGATGGAAAGAGCT...CACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACAAGCTCTTTCCATCAGTaGGAACGCCCAGCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTSSFHQ*ERPAPL Trigger: CAGAGGAGCTGGGCGTTCCCACTGATGGAAAGAGCT...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | GGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACTCAGCTGTTTCTGGATaGGCAAAGACCACGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: GYAACMSTSCQESLLCSHSAVSG*AKTTLT Trigger: AGTGAGCGTGGTCTTTGCTCATCCAGAAACAGCTGA...GTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | AGTTCCAGAAGCCAACCTCCTGGCTTTGTAAGCCTAACTGTCCTTCTTAGGACATCAGCTGTTTCTGGATaGGCAAAGACCACGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: SSRSQPPGFVSLTVLLRTSAVSG*AKTTLT Trigger: AGTGAGCGTGGTCTTTGCTCATCCAGAAACAGCTGA...TGTCCTAAGAAGGACAGTTAGGCTTACAAAGCCAGGAGGTTGGCTTCTGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCTGCTATTGCCTCCCTGGTaGCAAGCTGCAAGTCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: FEDTVMVGKQSFSRICCLLLPPW*QAASHG Trigger: TCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAG...CAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | TATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGAACAGCTGTGCCACGTaGTTGTTCTCCTCAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: YAACMSTSCQESLLCSHVNSCAT*LFSSVS Trigger: ACTGACTGAGGAGAACAAGCACGTGGCACAGCTGTT...CACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | TCATTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTAACGCCCAGCTCCTCTaGAAACAGGGGGTGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: SFSRICCLYVHIMPGKPFNAQLL*KQGVSY Trigger: ATAACTCACCCCCTGTTTTCAGAGGAGCTGGGCGTT...AAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | GGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCAACGCCCAGCTCCTCTaGAAACAGGGGGTGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: GFEDTVMVGKQSFSRICCNAQLL*KQGVSY Trigger: ATAACTCACCCCCTGTTTTCAGAGGAGCTGGGCGTT...GCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | TTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCCCTGGTGACAAGCTaGAAGTCACGGACTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: FPGYAACMSTSCQESLLCSLVTS*KSRTWI Trigger: AATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGA...ACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACATCACCTTCCTTCATATaGCCTATTGCCTCCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTSPSFI*PIASLV Trigger: CACCAGGGAGGCAATAGGGCATATGAAGGAAGGTGA...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGAGCAGGCTGCCCTTTCATCGCAATCAAAAACATCTTCCTGATATACTATTGCCTCCCTGGTaGCAAGCTGCAAGTCACGGA | + |
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Preference number: 4 (lower is better) Translates to: FQRSRLPFHRNQKHLPDILLPPW*QAASHG Trigger: TCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAG...TATATCAGGAAGATGTTTTTGATTGCGATGAAAGGGCAGCCTGCTCCTTTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGTGGGTGTTTGTAAGGTaGGGGAAGATCCACACCACA | + |
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Preference number: 4 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRWVFVR*GKIHTT Trigger: TGTGGTGTGGATCTTCCCGCACCTTACAAACACCCA...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAGCAACCATGCAGCATaGTCTCTTACAGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRSNHAA*SLTDSC Trigger: GCAGCTGTCTGTAAGAGAGCATGCTGCATGGTTGCT...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCCTTCATATGCCCTATTaGCTCCCTGGTGACAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLKTPLWWVNSHFPGYAALHMPY*LPGDKL Trigger: CAGCTTGTCACCAGGGAGGCAATAGGGCATATGAAG...GGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGGAGCAACTCCTTGGATaGGTGTTTGTAAGGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQEQLLG*VFVRCG Trigger: CCCGCACCTTACAAACACCCATCCAAGGAGTTGCTC...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CCA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAGAGCAACTCCTTGGATaGGTGTTTGTAAGGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGEQLLG*VFVRCG Trigger: CCCGCACCTTACAAACACCCATCCAAGGAGTTGCTC...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCGAGCAACTCCTTGGATaGGTGTTTGTAAGGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSEQLLG*VFVRCG Trigger: CCCGCACCTTACAAACACCCATCCAAGGAGTTGCTC...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | TTTCAAAGGAGCAGGCTGCCCTTTCATCGCAATCAAAAACATCTTCCTGATATAAACGCCCAGCTCCTCTaGAAACAGGGGGTGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: FQRSRLPFHRNQKHLPDINAQLL*KQGVSY Trigger: ATAACTCACCCCCTGTTTTCAGAGGAGCTGGGCGTT...TATATCAGGAAGATGTTTTTGATTGCGATGAAAGGGCAGCCTGCTCCTTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCTCAGCTGTTTCTGGATaGGCAAAGACCACGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSSAVSG*AKTTLT Trigger: AGTGAGCGTGGTCTTTGCTCATCCAGAAACAGCTGA...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | GGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCGCATACAGTCTTCGGTaGGTTTGGAGGACAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GFEDTVMVGKQSFSRICCAYSLR*VWRTRK Trigger: TTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGC...GCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR TCA 90 bp | TTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTCTCCTTCATTTCTTGTaGGGTGAAATGCACTCGATG | + |
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Preference number: 4 (lower is better) Translates to: FPGYAACMSTSCQESLLCLLHFL*GEMHSM Trigger: CATCGAGTGCATTTCACCTCACAAGAAATGAAGGAG...ACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAAACAGCTGTGCCACGTaGTTGTTCTCCTCAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGNSCAT*LFSSVS Trigger: ACTGACTGAGGAGAACAAGCACGTGGCACAGCTGTT...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAACAGCTGTGCCACGTaGTTGTTCTCCTCAGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSNSCAT*LFSSVS Trigger: ACTGACTGAGGAGAACAAGCACGTGGCACAGCTGTT...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTTGGGTGTTTGTAAGGTaGGGGAAGATCCACACCACA | + |
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Preference number: 4 (lower is better) Translates to: QINMIQVVLKTPLWWVNSWVFVR*GKIHTT Trigger: TGTGGTGTGGATCTTCCCGCACCTTACAAACACCCA...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCTCTCTTACAGACAGCTaGGGTGGAAAGGAGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: GFEDTVMVGKQSFSRICCSLTDS*GGKETD Trigger: ATCTGTCTCCTTTCCACCGCAGCTGTCTGTAAGAGA...GCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGGACAAAGCTTTCAAAACTaGCATTCTGGTAAATACCGA | + |
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Preference number: 4 (lower is better) Translates to: AACMSTSCQESLLCSHVGQSFQN*HSGKYR Trigger: TCGGTATTTACCAGAATGGCAGTTTTGAAAGCTTTG...TCCCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | TCATTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGGAGGACAAGGAAATTaGCCGAGGAAGTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SFSRICCLYVHIMPGKPFGGQGN*PRKSSS Trigger: AGAAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCC...AAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCTGGGAGGACAAGGAAATTaGCCGAGGAAGTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FEDTVMVGKQSFSRICCLGGQGN*PRKSSS Trigger: AGAAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCC...CAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACAAAACAGCACCATGAGTaGACTCAACTTCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTKQHHE*TQLQGQ Trigger: CTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTT...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAATCCCTGGTGACAAGCTaGAAGTCACGGACTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GTDQHDPSGFEDTVMVGKSLVTS*KSRTWI Trigger: AATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGA...TTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCTTCATATGCCCTATTaGCTCCCTGGTGACAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QINMIQVVLKTPLWWVNSLHMPY*LPGDKL Trigger: CAGCTTGTCACCAGGGAGGCAATAGGGCATATGAAG...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTATCTTCAGCTGTTTCTaGATGAGCAAAGACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPGYAACMSTSCQESLLCIFSCF*MSKDHA Trigger: AGCGTGGTCTTTGCTCATCCAGAAACAGCTGAAGAT...ACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGACTTCACCTAGGAAATaGCAATCTTCAGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLPVCPHHARKAFCVHTWTSPRK*QSSAVS Trigger: AGAAACAGCTGAAGATTGCCATTTCCTAGGTGAAGT...CCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCTGATAAAACCACGCTGGTaGATTCAAACCCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FEDTVMVGKQSFSRICCLIKPRW*IQTQRL Trigger: AAGCCTCTGGGTTTGAATTCACCAGCGTGGTTTTAT...CAGGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAGCATACAGTCTTCGGTaGGTTTGGAGGACAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGAYSLR*VWRTRK Trigger: TTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGC...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCACAAAAACAGCACCATaGGTGCACTCAACTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLKTPLWWVNSHFPGYAATKTAP*VHSTSR Trigger: CCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGT...GGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCTTCTCGTCCCGAGGATaGGAAATTAAAACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFEDTVMVGKQSFSRICCFSSRG*EIKTLC Trigger: GCAGAGAGTTTTAATTTCTCATCCTCGGGACGAGAA...GCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACATCATTTCTTGTGAGGTaGAATGCACTCGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTSFLVR*NALDED Trigger: ATCCTCATCGAGTGCATTTCACCTCACAAGAAATGA...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCCTCCTTCATTTCTTGTaGGGTGAAATGCACTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLKTPLWWVNSHFPGYAALLHFL*GEMHSM Trigger: CATCGAGTGCATTTCACCTCACAAGAAATGAAGGAG...GGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTTGTGTCTTCATAGAGTaGATGGCCCGAGTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QINMIQVVLKTPLWWVNSCVFIE*MARVLT Trigger: TGTGAGAACTCGGGCCATTCACTCTATGAAGACACA...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCTCTCTTACAGACAGCTaGGGTGGAAAGGAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSSLTDS*GGKETD Trigger: ATCTGTCTCCTTTCCACCGCAGCTGTCTGTAAGAGA...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGAGCAACCATGCAGCATaGTCTCTTACAGACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGTDQHDPSGFEDTVMVSNHAA*SLTDSC Trigger: GCAGCTGTCTGTAAGAGAGCATGCTGCATGGTTGCT...CACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAAACAGCACCATGAGTaGACTCAACTTCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRKQHHE*TQLQGQ Trigger: CTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTT...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCACAAAAACAGCACCATaGGTGCACTCAACTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSTKTAP*VHSTSR Trigger: CCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGT...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTACAAAAACAGCACCATaGGTGCACTCAACTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLKTPLWWVNSHFPGYATKTAP*VHSTSR Trigger: CCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGT...AGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAATTCTCGTCCCGAGGATaGGAAATTAAAACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTDQHDPSGFEDTVMVGKFSSRG*EIKTLC Trigger: GCAGAGAGTTTTAATTTCTCATCCTCGGGACGAGAA...TTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGTCATTTCTTGTGAGGTaGAATGCACTCGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRSFLVR*NALDED Trigger: ATCCTCATCGAGTGCATTTCACCTCACAAGAAATGA...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACATTCCTAAGCAAACATTaGACACTCTCAGCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTFLSKH*TLSALK Trigger: CTTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAA...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAAAGGAGCAGGCTGCCCTTTCATCGCAATCAAAAACATCTTCCTGATATAGGAGGACAAGGAAATTaGCCGAGGAAGTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQRSRLPFHRNQKHLPDIGGQGN*PRKSSS Trigger: AGAAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCC...TATATCAGGAAGATGTTTTTGATTGCGATGAAAGGGCAGCCTGCTCCTTTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGAAACAGCACCATGAGTaGACTCAACTTCAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQKQHHE*TQLQGQ Trigger: CTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTT...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATTCAGAAGTTCAACTaGAAAGGGCCTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRIQKFN*KGPSIS Trigger: GGAAATGGAAGGCCCTTTGCAGTTGAACTTCTGAAT...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGATCTTCAGCTGTTTCTaGATGAGCAAAGACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQIFSCF*MSKDHA Trigger: AGCGTGGTCTTTGCTCATCCAGAAACAGCTGAAGAT...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACATTCTCACAGAATTCCTaGAGAATTCCTAAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTFSQNS*RIPKQT Trigger: TGTTTGCTTAGGAATTCTTCAGGAATTCTGTGAGAA...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCTCACAGAATTCCTaGAGAATTCCTAAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FSRICCLYVHIMPGKPFVFSQNS*RIPKQT Trigger: TGTTTGCTTAGGAATTCTTCAGGAATTCTGTGAGAA...CACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGATAAAACCACGCTGGTaGATTCAAACCCAGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGTDQHDPSGFEDTVMVIKPRW*IQTQRL Trigger: AAGCCTCTGGGTTTGAATTCACCAGCGTGGTTTTAT...CACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTGCATACAGTCTTCGGTaGGTTTGGAGGACAAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NMIQVVLKTPLWWVNSHFAYSLR*VWRTRK Trigger: TTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGC...AAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTCTTGTGAGGTaGAATGCACTCGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQSFLVR*NALDED Trigger: ATCCTCATCGAGTGCATTTCACCTCACAAGAAATGA...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTTTGCTATTATTCACACATGATGAAACAAGGTTTCAAAGGAGCAGGCTGTGTCTTCATAGAGTaGATGGCCCGAGTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTLCYYSHMMKQGFKGAGCVFIE*MARVLT Trigger: TGTGAGAACTCGGGCCATTCACTCTATGAAGACACA...GCCTGCTCCTTTGAAACCTTGTTTCATCATGTGTGAATAATAGCAAAGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATTGTGTCTTCATAGAGTaGATGGCCCGAGTTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCHLLCRRHILTIFDCQNCVFIE*MARVLT Trigger: TGTGAGAACTCGGGCCATTCACTCTATGAAGACACA...ATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCTTCCTAAGCAAACATTaGACACTCTCAGCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLKTPLWWVNSHFPGYAAFLSKH*TLSALK Trigger: CTTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAA...GGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATTCTCTTACAGACAGCTaGGGTGGAAAGGAGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCHLLCRRHILTIFDCQNSLTDS*GGKETD Trigger: ATCTGTCTCCTTTCCACCGCAGCTGTCTGTAAGAGA...ATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTTTTTACCAGCAACCATaGAGCATGCTCTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QINMIQVVLKTPLWWVNSFYQQP*SMLSYR Trigger: TCTGTAAGAGAGCATGCTGCATGGTTGCTGGTAAAA...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCTTTTACCAGCAACCATaGAGCATGCTCTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSFYQQP*SMLSYR Trigger: TCTGTAAGAGAGCATGCTGCATGGTTGCTGGTAAAA...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGGAAATTAAAACTCTCTaGTCTGAATACTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSRICCLYVHIMPGKPFVEIKTL*SEYCQK Trigger: CTTCTGGCAGTATTCAGAGCAGAGAGTTTTAATTTC...CACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGCTGTTTATTTTTAGCTaGTTTGAAACAATCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YAACMSTSCQESLLCSHVLFIFS*FETISA Trigger: TGCCGAGATTGTTTCAAACCAGCTAAAAATAAACAG...CACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AAAACCCTTTGCTATTATTCACACATGATGAAACAAGGTTTCAAAGGAGCAGGCTTCTCGTCCCGAGGATaGGAAATTAAAACTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTLCYYSHMMKQGFKGAGFSSRG*EIKTLC Trigger: GCAGAGAGTTTTAATTTCTCATCCTCGGGACGAGAA...GCCTGCTCCTTTGAAACCTTGTTTCATCATGTGTGAATAATAGCAAAGGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATCTCCTTCATTTCTTGTaGGGTGAAATGCACTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: RCHLLCRRHILTIFDCQNLLHFL*GEMHSM Trigger: CATCGAGTGCATTTCACCTCACAAGAAATGAAGGAG...ATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATTCCTAAGCAAACATTaGACACTCTCAGCTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGFLSKH*TLSALK Trigger: CTTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAA...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACAGATTTATTAATTGTCTaGTGGAGCTCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RICCLYVHIMPGKPFVFTDLLIV*WSSFIS Trigger: AGAAATGAAGGAGCTCCAGCAGACAATTAATAAATC...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATATCTTCAGCTGTTTCTaGATGAGCAAAGACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCHLLCRRHILTIFDCQNIFSCF*MSKDHA Trigger: AGCGTGGTCTTTGCTCATCCAGAAACAGCTGAAGAT...ATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | GGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAAACTTCACCTAGGAAATaGCAATCTTCAGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDQHDPSGFEDTVMVGKTSPRK*QSSAVS Trigger: AGAAACAGCTGAAGATTGCCATTTCCTAGGTGAAGT...TTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTTCTCACAGAATTCCTaGAGAATTCCTAAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SGFEDTVMVGKQSFSRICFSQNS*RIPKQT Trigger: TGTTTGCTTAGGAATTCTTCAGGAATTCTGTGAGAA...GCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGCAAAGCTTTCAAAACTaGCATTCTGGTAAATACCGA | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQQSFQN*HSGKYR Trigger: TCGGTATTTACCAGAATGGCAGTTTTGAAAGCTTTG...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCGAAATTAAAACTCTCTaGTCTGAATACTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFEDTVMVGKQSFSRICEIKTL*SEYCQK Trigger: CTTCTGGCAGTATTCAGAGCAGAGAGTTTTAATTTC...GCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGGAAATTAAAACTCTCTaGTCTGAATACTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQEIKTL*SEYCQK Trigger: CTTCTGGCAGTATTCAGAGCAGAGAGTTTTAATTTC...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | AACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTATTCAGAAGTTCAACTaGAAAGGGCCTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NMIQVVLKTPLWWVNSHFIQKFN*KGPSIS Trigger: GGAAATGGAAGGCCCTTTGCAGTTGAACTTCTGAAT...AAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | TGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATAGTATTCAGAAGTTCAACTaGAAAGGGCCTTCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHLLCRRHILTIFDCQNSIQKFN*KGPSIS Trigger: GGAAATGGAAGGCCCTTTGCAGTTGAACTTCTGAAT...ACTATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAAGATTTATTAATTGTCTaGTGGAGCTCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDQHDPSGFEDTVMVGKDLLIV*WSSFIS Trigger: AGAAATGAAGGAGCTCCAGCAGACAATTAATAAATC...TTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR GCA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTGATTTATTAATTGTCTaGTGGAGCTCCTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QINMIQVVLKTPLWWVNSDLLIV*WSSFIS Trigger: AGAAATGAAGGAGCTCCAGCAGACAATTAATAAATC...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | ACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGCTGTTTATTTTTAGCTaGTTTGAAACAATCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TDQHDPSGFEDTVMVGKQLFIFS*FETISA Trigger: TGCCGAGATTGTTTCAAACCAGCTAAAAATAAACAG...CTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGTGCAAGTCACGGACTTaGATTTTGTCAGATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGTDQHDPSGFEDTVMVCKSRT*ILSDDL Trigger: TAAATCATCTGACAAAATCCAAGTCCGTGACTTGCA...CACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | AAAACCCTTTGCTATTATTCACACATGATGAAACAAGGTTTCAAAGGAGCAGGCTGCAAGTCACGGACTTaGATTTTGTCAGATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KTLCYYSHMMKQGFKGAGCKSRT*ILSDDL Trigger: TAAATCATCTGACAAAATCCAAGTCCGTGACTTGCA...GCCTGCTCCTTTGAAACCTTGTTTCATCATGTGTGAATAATAGCAAAGGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATAGTTGCAAGTCACGGACTTaGATTTTGTCAGATGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: CHLLCRRHILTIFDCQNSCKSRT*ILSDDL Trigger: TAAATCATCTGACAAAATCCAAGTCCGTGACTTGCA...ACTATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGGGAAGCTGTGCCACGTGCTaGTTCTCCTCAGTCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AACMSTSCQESLLCSHVGSCATC*FSSVSG Trigger: TCCACTGACTGAGGAGAACAAGCACGTGGCACAGCT...TCCCACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 90 bp | CCACACCACAGAATCTTAAGATGCATCTTGGACAGGTGCCAGAACTaGACAACAGCTGTGCCACGTGCTTGTTCTCCTCAGTCAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PHHRILRCILDRCQN*TTAVPRACSPQSVE Trigger: TTCCACTGACTGAGGAGAACAAGCACGTGGCACAGCTGTTGTTCAGTTCTGGCACCTGTCCAAGATGCATCTTAAGATTCTGTGGTGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 ENSMUST00000143117.2 |
||
| CDS GCA 90 bp | CGGCCAGTCAACATCTACAGACTCCACATCCAGCTCAAGAATGTCTaGAGTCACGTTCATCAAAGAGCCAAGGTTTGGTTTGGTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPVNIYRLHIQLKNV*SHVHQRAKVWFGSP Trigger: GGGAGAACCAAACCAAACCTTGGCTCTTTGATGAACGTGACTGCAGACATTCTTGAGCTGGATGTGGAGTCTGTAGATGTTGACTGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 90 bp | CAGCGACAAAAACAGCACCATGAGTGCACTCAACTTCAAGGACAGTaGATACAGTCTTCGGTGAGTTTGGAGGACAAGGAAATTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQKQHHECTQLQGQ*IQSSVSLEDKEIAR Trigger: TCGGGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGTCGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS TCA 90 bp | CGGCAAACTTCACCTAGGAAATGGCAATCTTCAGCTGTTTCTGGATaGGCAAAGACCACGCTCACTTCGAACAAGCTCTTTCCATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQTSPRKWQSSAVSG*AKTTLTSNKLFPSV Trigger: CACTGATGGAAAGAGCTTGTTCGAAGTGAGCGTGGTCTTTGCTCATCCAGAAACAGCTGAAGATTGCCATTTCCTAGGTGAAGTTTGCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 90 bp | GCTTCTTTCAGCTGGACTACATCATTTCTTCCCAGGGACAGACTCTaGTTTCCCATTTCCTGTTTTACCAGCAACCATGCAGCATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASFSWTTSFLPRDRL*FPISCFTSNHAACS Trigger: AGAGCATGCTGCATGGTTGCTGGTAAAACAGGAAATGGGAAAGCAGAGTCTGTCCCTGGGAAGAAATGATGTAGTCCAGCTGAAAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CAA 90 bp | CATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGCTGTGCCACGTGCTaGTTCTCCTCAGTCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HDPSGFEDTVMVGKQSFSSCATC*FSSVSG Trigger: TCCACTGACTGAGGAGAACAAGCACGTGGCACAGCT...GGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CAA 90 bp | GTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTAGCTGTGCCACGTGCTaGTTCTCCTCAGTCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVLKTPLWWVNSHFPGYASCATC*FSSVSG Trigger: TCCACTGACTGAGGAGAACAAGCACGTGGCACAGCT...AGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CAA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACAGTCTTCGGTGAGTTaGGAGGACAAGGAAATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RICCLYVHIMPGKPFVFTQSSVS*EDKEIA Trigger: GGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTG...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CAA 90 bp | TTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGCAGTCTTCGGTGAGTTaGGAGGACAAGGAAATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSRICCLYVHIMPGKPFVQSSVS*EDKEIA Trigger: GGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTG...CACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 90 bp | ACCATGAGTGCACTCAACTTCAAGGACAGTGCATACAGTCTTCGGTaGGTTTGGAGGACAAGGAAATTGCCCGAGGAAGTCTTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TMSALNFKDSAYSLR*VWRTRKLPEEVFFF Trigger: AAAGAAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGCACTCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | GATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGCAGTCTTCGGTGAGTTaGGAGGACAAGGAAATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DPSGFEDTVMVGKQSFSRQSSVS*EDKEIA Trigger: GGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTG...CCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS-3UTR CAA 90 bp | TATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACACGTGTCAAAGAGCCAAGGTTaGGTTTGGTTCTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YAACMSTSCQESLLCSHVSKSQG*VWFSQS Trigger: ACTTTGGGAGAACCAAACCAAACCTTGGCTCTTTGA...CACGTGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 90 bp | GTCTGCTGGAGCTCCTTCATTTCTTGTGAGGTGAAATGCACTCGATaGGGATTCAGAAGTTCAACTGCAAAGGGCCTTCCATTTCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VCWSSFISCEVKCTR*GFRSSTAKGLPFPN Trigger: ATTAGGAAATGGAAGGCCCTTTGCAGTTGAACTTCTGAATCCTCATCGAGTGCATTTCACCTCACAAGAAATGAAGGAGCTCCAGCAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CCA 90 bp | ATATGCCCTATTGCCTCCCTGGTGACAAGCTGCAAGTCACGGACTTaGATTTTGTCAGATGATTTATTAATTGTCTGCTGGAGCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ICPIASLVTSCKSRT*ILSDDLLIVCWSSF Trigger: GAAGGAGCTCCAGCAGACAATTAATAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAGGGCATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | AGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTGTGTTCACATCAAAGAGCCAAGGTTaGGTTTGGTTCTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RICCLYVHIMPGKPFVFTSKSQG*VWFSQS Trigger: ACTTTGGGAGAACCAAACCAAACCTTGGCTCTTTGA...TGTGAACACAAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | GGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAAAATGTAGGTTCCAGCTaGGGTCTTCAAATGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GTDQHDPSGFEDTVMVGKNVGSS*GLQMQT Trigger: CGTCTGCATTTGAAGACCCAAGCTGGAACCTACATT...TTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAAATGTAGGTTCCAGCTaGGGTCTTCAAATGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGNVGSS*GLQMQT Trigger: CGTCTGCATTTGAAGACCCAAGCTGGAACCTACATT...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS TCA 90 bp | ACCTTTTGGCACACCTTCGTAATAAACCCCTTCTCACAGAATTCCTaGAGAATTCCTAAGCAAACATTGCACACTCTCAGCTTTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TFWHTFVINPFSQNS*RIPKQTLHTLSFEG Trigger: GCCTTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAATTCTTCAGGAATTCTGTGAGAAGGGGTTTATTACGAAGGTGTGCCAAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 ENSMUST00000143117.2 |
||
| CDS GCA 90 bp | TGGAGTATTTATTATATCTGCCAGCGACAAAAACAGCACCATGAGTaGACTCAACTTCAAGGACAGTGCATACAGTCTTCGGTGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSIYYICQRQKQHHE*TQLQGQCIQSSVSL Trigger: CAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGTCGCTGGCAGATATAATAAATACTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGGAACAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGAATGTAGGTTCCAGCTaGGGTCTTCAAATGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: TLGTDQHDPSGFEDTVMVNVGSS*GLQMQT Trigger: CGTCTGCATTTGAAGACCCAAGCTGGAACCTACATT...CACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTGTTCCTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | CAGATCAACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTAATTTTTGTAGCTCATaGAGCAACTCCTTGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QINMIQVVLKTPLWWVNSNFCSS*SNSLDG Trigger: CCCATCCAAGGAGTTGCTCAATGAGCTACAAAAATT...ACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTTGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGAAATTTTTGTAGCTCATaGAGCAACTCCTTGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQVVLKTPLWWVNSHFPGNFCSS*SNSLDG Trigger: CCCATCCAAGGAGTTGCTCAATGAGCTACAAAAATT...TCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCCAGGATATGCTGCCTGTATGTCCACATCATGCCAGGAAAGCCTTTTATTCCTAAGCAAACATaGCACACTCTCAGCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFSRICCLYVHIMPGKPFIPKQT*HTLSFE Trigger: TTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAAT...AAAAGGCTTTCCTGGCATGATGTGGACATACAGGCAGCATATCCTGGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTCCAGGATATGCTGCCATTCCTAAGCAAACATaGCACACTCTCAGCTTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VLKTPLWWVNSHFPGYAAIPKQT*HTLSFE Trigger: TTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAAT...GGCAGCATATCCTGGAAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | AACATGATCCAAGTGGTTTTGAAGACACCGTTATGGTGGGTAAACAGTCATTTTTCAAAGAGCCAAGGTTaGGTTTGGTTCTCCCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NMIQVVLKTPLWWVNSHFSKSQG*VWFSQS Trigger: ACTTTGGGAGAACCAAACCAAACCTTGGCTCTTTGA...AAAATGACTGTTTACCCACCATAACGGTGTCTTCAAAACCACTTGGATCATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
||
| CDS-3UTR CAA 90 bp | TGTCACTTGCTTTGCAGGAGACACATACTGACAATTTTCGATTGTCAAAATAGTATTCCTAAGCAAACATaGCACACTCTCAGCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: CHLLCRRHILTIFDCQNSIPKQT*HTLSFE Trigger: TTCAAAGCTGAGAGTGTGCAATGTTTGCTTAGGAAT...ACTATTTTGACAATCGAAAATTGTCAGTATGTGTCTCCTGCAAAGCAAGTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 72 bp | GCATCTTGGACAGGTGCCAGAACTGAACAACAGCTGTaGCACGTGCTTGTTCTCCTCAGTCAGTGGAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: ASWTGARTEQQL*HVLVLLSQWKH Trigger: ATGCTTCCACTGACTGAGGAGAACAAGCACGTGGCACAGCTGTTGTTCAGTTCTGGCACCTGTCCAAGATGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 ENSMUST00000143117.2 |
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| CDS TCA 72 bp | GCACTCAACTTCAAGGACAGTGCATACAGTCTTCGGTaGGTTTGGAGGACAAGGAAATTGCCCGAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ALNFKDSAYSLR*VWRTRKLPEEV Trigger: GACTTCCTCGGGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 72 bp | AGAATCTTAAGATGCATCTTGGACAGGTGCCAGAACTaGACAACAGCTGTGCCACGTGCTTGTTCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RILRCILDRCQN*TTAVPRACSPQ Trigger: CTGAGGAGAACAAGCACGTGGCACAGCTGTTGTTCAGTTCTGGCACCTGTCCAAGATGCATCTTAAGATTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 ENSMUST00000143117.2 |
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| CDS GCA 72 bp | AGCTGGACTACATCATTTCTTCCCAGGGACAGACTCTaGTTTCCCATTTCCTGTTTTACCAGCAACCATGCA | + |
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Preference number: 6 (lower is better) Translates to: SWTTSFLPRDRL*FPISCFTSNHA Trigger: TGCATGGTTGCTGGTAAAACAGGAAATGGGAAAGCAGAGTCTGTCCCTGGGAAGAAATGATGTAGTCCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 72 bp | AAACAGCACCATGAGTGCACTCAACTTCAAGGACAGTaGATACAGTCTTCGGTGAGTTTGGAGGACAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KQHHECTQLQGQ*IQSSVSLEDKE Trigger: TTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CAA 72 bp | CAACTTCAAGGACAGTGCATACAGTCTTCGGTGAGTTaGGAGGACAAGGAAATTGCCCGAGGAAGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: QLQGQCIQSSVS*EDKEIARGSLL Trigger: AAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CAA 90 bp | GAGTGCACTCAACTTCAAGGACAGTGCATACAGTCTTCGGTGAGTTaGGAGGACAAGGAAATTGCCCGAGGAAGTCTTCTTCTTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: ECTQLQGQCIQSSVS*EDKEIARGSLLLLS Trigger: AGATAAAAGAAGAAGACTTCCTCGGGCAATTTCCTTGTCCTCCAAACTCACCGAAGACTGTATGCACTGTCCTTGAAGTTGAGTGCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 72 bp | AGCTCCTTCATTTCTTGTGAGGTGAAATGCACTCGATaGGGATTCAGAAGTTCAACTGCAAAGGGCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSFISCEVKCTR*GFRSSTAKGLP Trigger: TGGAAGGCCCTTTGCAGTTGAACTTCTGAATCCTCATCGAGTGCATTTCACCTCACAAGAAATGAAGGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 72 bp | TCCTTCATATGCCCTATTGCCTCCCTGGTGACAAGCTaGAAGTCACGGACTTGGATTTTGTCAGATGATTTA | + |
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Preference number: 6 (lower is better) Translates to: SFICPIASLVTS*KSRTWILSDDL Trigger: TAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAGGGCATATGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CCA 72 bp | ACGCTGGTGAATTCAAACCCAGAGGCTTCAACCTTTTaGCACACCTTCGTAATAAACCCCTTCTCACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TLVNSNPEASTF*HTFVINPFSQN Trigger: ATTCTGTGAGAAGGGGTTTATTACGAAGGTGTGCCAAAAGGTTGAAGCCTCTGGGTTTGAATTCACCAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 ENSMUST00000143117.2 |
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| CDS CAA 72 bp | TCCCTGGTGACAAGCTGCAAGTCACGGACTTGGATTTaGTCAGATGATTTATTAATTGTCTGCTGGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLVTSCKSRTWI*SDDLLIVCWSS Trigger: GGAGCTCCAGCAGACAATTAATAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CAA 90 bp | CCTATTGCCTCCCTGGTGACAAGCTGCAAGTCACGGACTTGGATTTaGTCAGATGATTTATTAATTGTCTGCTGGAGCTCCTTCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: PIASLVTSCKSRTWI*SDDLLIVCWSSFIS Trigger: AGAAATGAAGGAGCTCCAGCAGACAATTAATAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGAGGCAATAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS GCA 72 bp | AACATCTACAGACTCCACATCCAGCTCAAGAATGTCTaGAGTCACGTTCATCAAAGAGCCAAGGTTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NIYRLHIQLKNV*SHVHQRAKVWF Trigger: AAACCAAACCTTGGCTCTTTGATGAACGTGACTGCAGACATTCTTGAGCTGGATGTGGAGTCTGTAGATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CCA 72 bp | ATTGCCTCCCTGGTGACAAGCTGCAAGTCACGGACTTaGATTTTGTCAGATGATTTATTAATTGTCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IASLVTSCKSRT*ILSDDLLIVCW Trigger: CCAGCAGACAATTAATAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTCACCAGGGAGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS CAA 90 bp | TCTCCCAAAGTCTCCATGTACAAATTCTTTAATGTAGGTTCCAGCTaGGGTCTTCAAATGCAGACGAAAATGATGCTCATCCAGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: SPKVSMYKFFNVGSS*GLQMQTKMMLIQVV Trigger: CACTACCTGGATGAGCATCATTTTCGTCTGCATTTGAAGACCCAAGCTGGAACCTACATTAAAGAATTTGTACATGGAGACTTTGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 72 bp | TATTTATTATATCTGCCAGCGACAAAAACAGCACCATaGGTGCACTCAACTTCAAGGACAGTGCATACAGTC | + |
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Preference number: 6 (lower is better) Translates to: YLLYLPATKTAP*VHSTSRTVHTV Trigger: GACTGTATGCACTGTCCTTGAAGTTGAGTGCACTCATGGTGCTGTTTTTGTCGCTGGCAGATATAATAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 72 bp | GACAAGCTGCAAGTCACGGACTTGGATTTTGTCAGATaGTTTATTAATTGTCTGCTGGAGCTCCTTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: DKLQVTDLDFVR*FINCLLELLHF Trigger: GAAATGAAGGAGCTCCAGCAGACAATTAATAAATCATCTGACAAAATCCAAGTCCGTGACTTGCAGCTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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| CDS TCA 72 bp | TTTATTAATTGTCTGCTGGAGCTCCTTCATTTCTTGTaGGGTGAAATGCACTCGATGAGGATTCAGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FINCLLELLHFL*GEMHSMRIQKF Trigger: GAACTTCTGAATCCTCATCGAGTGCATTTCACCTCACAAGAAATGAAGGAGCTCCAGCAGACAATTAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020520.11 ENSMUST00000058163.11 ENSMUST00000109525.8 |
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