Pregenerated sensors for PURB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094483Ensembl transcript IDs: ENSMUST00000179343.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCCAGCCAGTGGCTGTAACAGCCGAATTAGCCATAATTCTCTaGTTCATACGGTGGAGCCACTGGGATTCAGCTCCCACTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: CSQPVAVTAELAIIL*FIRWSHWDSAPTHA Trigger: AGCATGAGTGGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCACTGGCTGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 90 bp | AGTGAAGAGTTCCTGAAGGTGGGGAAAGGTCACACCTGTGCCTTCTaGACTTCATGGTGGACACTGAGCAAGGCCTACTACTGTTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SEEFLKVGKGHTCAF*TSWWTLSKAYYCFL Trigger: GAGAAAACAGTAGTAGGCCTTGCTCAGTGTCCACCATGAAGTGCAGAAGGCACAGGTGTGACCTTTCCCCACCTTCAGGAACTCTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CCA 90 bp | GTGGCTGTAACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGTaGAGCCACTGGGATTCAGCTCCCACTCATGCTAAGCCATTTCTT | + |
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Preference number: 1 (lower is better) Translates to: VAVTAELAIILWFIR*SHWDSAPTHAKPFL Trigger: AAGAAATGGCTTAGCATGAGTGGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CCA 90 bp | ACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGTGGAGCCACTaGGATTCAGCTCCCACTCATGCTAAGCCATTTCTTGGTAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: TAELAIILWFIRWSH*DSAPTHAKPFLGKD Trigger: GTCTTTACCAAGAAATGGCTTAGCATGAGTGGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CCA 90 bp | GATTTCGATGGAGGTGAAGGGATAGATGCTGATAGTAGTGAGGCCTaGAGGGATCCTAAGACCAGATTACCCAGGAAGAACACAAATTCA | + |
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Preference number: 1 (lower is better) Translates to: DFDGGEGIDADSSEA*RDPKTRLPRKNTNS Trigger: TGAATTTGTGTTCTTCCTGGGTAATCTGGTCTTAGGATCCCTCCAGGCCTCACTACTATCAGCATCTATCCCTTCACCTCCATCGAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 90 bp | AGCAGCAACCAATCCACTCAAACAGTCCACTTTGTGCTTTATGCCTaGCTTCTTGTGCCCACCTCAGCAATCCCCATTGTAAAAATGCTT | + |
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Preference number: 1 (lower is better) Translates to: SSNQSTQTVHFVLYA*LLVPTSAIPIVKML Trigger: AAGCATTTTTACAATGGGGATTGCTGAGGTGGGCACAAGAAGTCAGGCATAAAGCACAAAGTGGACTGTTTGAGTGGATTGGTTGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 90 bp | AGAAGCCATGTGTGCTCATGGCTACAGTCATTTGTACCACCTACATaGCTCCAACAGATACATAGGGTGTCTGGGTTTTTGGTTTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: RSHVCSWLQSFVPPT*LQQIHRVSGFLVCF Trigger: AAAGCAAACCAAAAACCCAGACACCCTATGTATCTGTTGGAGGCATGTAGGTGGTACAAATGACTGTAGCCATGAGCACACATGGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 90 bp | AAAGTTCCCTTAAGGCTGAGGGAAAGCAACTCATTAAACTGTGAGTaGAGCATCGTGTACTCTCCCATCCATTGGAAACTAGCAAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: KVPLRLRESNSLNCE*SIVYSPIHWKLASA Trigger: TGCACTTGCTAGTTTCCAATGGATGGGAGAGTACACGATGCTGCACTCACAGTTTAATGAGTTGCTTTCCCTCAGCCTTAAGGGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CCA 90 bp | ATGACTGACTCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTaGATGAGGGTCAGTGAAATGCTACAATTAACCCCCATCCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: MTDSPCLQISIVPSP*MRVSEMLQLTPILL Trigger: CAGAAGGATGGGGGTTAATTGTAGCATTTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGAGTCAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 90 bp | TCAGTCCATTCACAAATGGATTCAGCTTCTACCGGGTGCAACGCTTaGATCATTCATCCATCATTTGCCAACTTTGATTGTGAGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: SVHSQMDSASTGCNA*IIHPSFANFDCEVL Trigger: CAGTACCTCACAATCAAAGTTGGCAAATGATGGATGAATGATTCAAGCGTTGCACCCGGTAGAAGCTGAATCCATTTGTGAATGGACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 90 bp | GGTCACATTAACAAAGCATCCTCAGCAACTCTAGTGCCTGAAGTGTaGAGCCATTTACAGACCACTCAATATGAGGGCATTATTATAACC | + |
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Preference number: 1 (lower is better) Translates to: GHINKASSATLVPEV*SHLQTTQYEGIIIT Trigger: GGTTATAATAATGCCCTCATATTGAGTGGTCTGTAAATGGCTGCACACTTCAGGCACTAGAGTTGCTGAGGATGCTTTGTTAATGTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CCA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATaGAGGCTCTGCTCTTTGAACAGGCCTTATTATGCATGTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: DTSSSEVQHGKGAKR*RLCSLNRPYYACDF Trigger: AAAGTCACATGCATAATAAGGCCTGTTCAAAGAGCAGAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 90 bp | TCACTTCTTCCCCTTCTCACTGAGCAAGGCCACACTATTTTCAAATaGATATCTACTGAGAGATCAGTTGTGCATTGGACAAAGTACCAT | + |
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Preference number: 1 (lower is better) Translates to: SLLPLLTEQGHTIFK*ISTERSVVHWTKYH Trigger: ATGGTACTTTGTCCAATGCACAACTGATCTCTCAGTAGATATTCATTTGAAAATAGTGTGGCCTTGCTCAGTGAGAAGGGGAAGAAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 90 bp | TCTCCTTACATAGAACAATACTCAGAAGTGGATTATCTAGGGGCCTaGGAAACCATGATCCACATCACACATTATCCATGTATTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: SPYIEQYSEVDYLGA*ETMIHITHYPCISC Trigger: ACATGAAATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCCACTTCTGAGTATTGTTCTATGTAAGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 90 bp | AAAGCTGATGCCATATATGGTAGTGTTCTTGGCATATACTCTATATaGCTCAGACCACTTCCACATTCTTTCTATTCAGCTAATTATAGC | + |
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Preference number: 1 (lower is better) Translates to: KADAIYGSVLGIYSI*LRPLPHSFYSANYS Trigger: GCTATAATTAGCTGAATAGAAAGAATGTGGAAGTGGTCTGAGGCATATAGAGTATATGCCAAGAACACTACCATATATGGCATCAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATGGATGGTGGTGGGGTTaGGGGAGGCCGGTACGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYGWWWG*GRPVRE Trigger: TTCCCGTACCGGCCTCCCCCAACCCCACCACCATCC...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCGAATTAGCCATAATTCTCTGGTTCATACGGTGGAGCCACTGGGATTCAGCTCTCCACTAGCTCACTaGGGACGAGAAGGAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SRISHNSLVHTVEPLGFSSPLAH*GREGKG Trigger: GCCCTTTCCTTCTCGTCCCCAGTGAGCTAGTGGAGA...GCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCGATGCTGCTCCTCTTTaGAGGTTGCTGGCAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGDAAPL*RLLAVP Trigger: AGGAACTGCCAGCAACCTGCAAAGAGGAGCAGCATC...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCAGGTGAGGAGATGCTaGTCCTCTTTGCAGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGQVRRC*SSLQVA Trigger: AGCAACCTGCAAAGAGGAGCAGCATCTCCTCACCTG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTGCGCAGGTGAGGAGATaGTGCTCCTCTTTGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: DSALNGFQEVWFLDGYCTAQVRR*CSSLQV Trigger: AACCTGCAAAGAGGAGCAGCATCTCCTCACCTGCGC...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCATGCCTGACTTCTTGTaGCCACCTCAGCAATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGMPDFL*PPQQSP Trigger: TGGGGATTGCTGAGGTGGGCACAAGAAGTCAGGCAT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 90 bp | ACAGAAGCTGAGACTCTTGCGCAGGTGAGGAGATGCTGCTCCTCTTaGCAGGTTGCTGGCAGTTCCTTGGAACTTAACTGCTTTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: TEAETLAQVRRCCSS*QVAGSSLELNCFSL Trigger: TAGAGAAAAGCAGTTAAGTTCCAAGGAACTGCCAGCAACCTGCAAAGAGGAGCAGCATCTCCTCACCTGCGCAAGAGTCTCAGCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCTCCTCTTTGCAGGTTaGTGGCAGTTCCTTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGLLFAG*WQFLGT Trigger: AGTTCCAAGGAACTGCCAGCAACCTGCAAAGAGGAG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCACTGGCAGACAGGATaGGCAGTGAGATTCCTACAA | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGHWQTG*AVRFLQ Trigger: TTGTAGGAATCTCACTGCCCATCCTGTCTGCCAGTG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCCAGGAGGCTAATGGCTaGCTGCACCAAAAGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLQEANG*LHQKPL Trigger: GAGAGGCTTTTGGTGCAGGCAGCCATTAGCCTCCTG...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCCAGTGGCTGTAACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGAAAAGACAGGGGCCTTaGTCCAGGTTCCATGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SQPVAVTAELAIILWFIRKRQGP*SRFHAK Trigger: TTTTGCATGGAACCTGGACCAAGGCCCCTGTCTTTT...CCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCACTGGCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCGCTATTCCCAATGCATaGGTCTGGGTAACCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLAIPNA*VWVTQV Trigger: CACCTGGGTTACCCAGACTCATGCATTGGGAATAGC...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCTGGAATTCTGGACCTaGGGATCGTCAGTATTTCAA | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGLEFWT*GSSVFQ Trigger: TTGAAATACTGACGATCCTCAGGTCCAGAATTCCAG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTGGGCCTGAGAAACCATaGTCCACATCACACATTATC | + |
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Preference number: 2 (lower is better) Translates to: DSALNGFQEVWFLDGYCTGPEKP*STSHII Trigger: GATAATGTGTGATGTGGATCATGGTTTCTCAGGCCC...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCAGTGTGGTTTCTGGATaGGTACTGCACTTCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGSVVSG*VLHFMD Trigger: ATCCATGAAGTGCAGTACCCATCCAGAAACCACACT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTTCTCCAATGGCTTCTTaGATTCTTCTCTTGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSALNGFQEVWFLDGYCTSPMAS*ILLLPC Trigger: ACAGGGCAAGAGAAGAATTCAAGAAGCCATTGGAGA...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCTCTAGGAATACCTTTTaGTGGGGTGGGATTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGSRNTF*WGGINL Trigger: CAAGTTAATCCCACCCCATCAAAAGGTATTCCTAGA...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCTCCCTAGTCCCTGGATaGGGGTCAGTGAAATGCTAC | + |
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Preference number: 2 (lower is better) Translates to: QYEGIIITSLFCPQPCIFSLVPG*GSVKCY Trigger: GTAGCATTTCACTGACCCTCATCCAGGGACTAGGGA...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCACCATTCAGTCTATTaGAGGGAGTTACGACTCTTT | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGHHSVY*RELRLF Trigger: AAAGAGTCGTAACTCCCTTCAATAGACTGAATGGTG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCCAGTGGCTGTAACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGTCAGAACTGGGTAACTaGAAAAGGCCTCTTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQPVAVTAELAIILWFIRSELGN*KRPLSS Trigger: AGAAGAAAGAGGCCTTTTGCAGTTACCCAGTTCTGA...CCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCACTGGCTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCTTTGCAAAATTGAACTaGCTCACTGCAGCTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGFAKLN*LTAAEQ Trigger: TTGCTCAGCTGCAGTGAGCCAGTTCAATTTTGCAAA...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 90 bp | CAGGTGAGGAGATGCTGCTCCTCTTTGCAGGTTGCTGGCAGTTCCTaGGAACTTAACTGCTTTTCTCTAATTGTCTGTGACTGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: QVRRCCSSLQVAGSS*ELNCFSLIVCDCFL Trigger: AAGAAAACAGTCACAGACAATTAGAGAAAAGCAGTTAAGTTCCAAGGAACTGCCAGCAACCTGCAAAGAGGAGCAGCATCTCCTCACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAAACCGGGTGCAACGCTTaGATCATTCATCCATCATTT | + |
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Preference number: 2 (lower is better) Translates to: SPCLQISIVPSPWMRVSETGCNA*IIHPSF Trigger: AAATGATGGATGAATGATTCAAGCGTTGCACCCGGT...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCACAGACCACTCAATATaGGGGCATTATTATAACCAG | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGTDHSI*GHYYNQ Trigger: CTGGTTATAATAATGCCCTCATATTGAGTGGTCTGT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTTAATGAGCAGCAACCAATCCACTCAAACAGTCCACTTTGTGCTTTATGCCCTGTACCCTCAGAACTaGGTAACTGCAAAAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: TLMSSNQSTQTVHFVLYALYPQN*VTAKGL Trigger: GAGGCCTTTTGCAGTTACCCAGTTCTGAGGGTACAG...GGCATAAAGCACAAAGTGGACTGTTTGAGTGGATTGGTTGCTGCTCATTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAATTAGCCATAATTCTCTaGTTCATACGGTGGAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: SPCLQISIVPSPWMRVSELAIIL*FIRWSH Trigger: GTGGCTCCACCGTATGAACCAGAGAATTATGGCTAA...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAAAGGAGAGGTACTGCACCTTTGCAAAATTGAACTGGCTCACTGCAGCTTTCTTGAAAGACAGCTaGATAAACCGGCAAGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LEKERYCTFAKLNWLTAAFLKDS*INRQVP Trigger: TGGCACTTGCCGGTTTATCCAGCTGTCTTTCAAGAA...AGCTGCAGTGAGCCAGTTCAATTTTGCAAAGGTGCAGTACCTCTCCTTTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCTTTGTGCTTTATGCCTaGCTTCTTGTGCCCACCTCA | + |
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Preference number: 2 (lower is better) Translates to: QYEGIIITSLFCPQPCIFFVLYA*LLVPTS Trigger: TGAGGTGGGCACAAGAAGTCAGGCATAAAGCACAAA...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCAACTTCTCAGGAATGTaGCTATTTTTCATTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGNFSGM*LFFISW Trigger: CCAGCTAATGAAAAATAGTCACATTCCTGAGAAGTT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCAAATGAATATCTACTaGGAGATCAGTTGTGCATTG | + |
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Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGQMNIY*EISCAL Trigger: CAATGCACAACTGATCTCTCAGTAGATATTCATTTG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCGCCTTATTATGCATGTaGCTTTTAGGGGATACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGALLCM*LLGDTK Trigger: TTTAGTATCCCCTAAAAGTCACATGCATAATAAGGC...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCCCACTTTGTGCTTTATaGCTGACTTCTTGTGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QYEGIIITSLFCPQPCIFPLCAL*LTSCAH Trigger: GTGGGCACAAGAAGTCAGGCATAAAGCACAAAGTGG...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAAGGCATATACTCTATATaGCTCAGACCACTTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: SPCLQISIVPSPWMRVSEGIYSI*LRPLPH Trigger: ATGTGGAAGTGGTCTGAGGCATATAGAGTATATGCC...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCATAACCAGCCTCTTTTaGCCACAACCCTGCATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLITSLF*PQPCIF Trigger: GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTAT...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCATAGTGACATGGGCTTaGAGAAAAGGGTTTTACAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGIVTWA*RKGFYK Trigger: TTTGTAAAACCCTTTTCTCCAAGCCCATGTCACTAT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGTAGAGAAATAGTCTGTAAGGGCACCAATGTTTGTGGCTCTTCCATTTTTTTAAACAACAGAAGCTaGGACTCTTGCGCAGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ESREIVCKGTNVCGSSIFLNNRS*DSCAGE Trigger: CTCACCTGCGCAAGAGTCTCAGCTTCTGTTGTTTAA...AAAAATGGAAGAGCCACAAACATTGGTGCCCTTACAGACTATTTCTCTACTCTC 43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR TCA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTTTGATTGTGAGGTACTaGATAAGATGGATCAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DSALNGFQEVWFLDGYCTLIVRY*IRWIKF Trigger: GAACTTGATCCATCTTATTCAGTACCTCACAATCAA...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAAAAACAGTCCACTTTGTaGTTTATGCCTGACTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SPCLQISIVPSPWMRVSEKQSTL*FMPDFL Trigger: CAAGAAGTCAGGCATAAAGCACAAAGTGGACTGTTT...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCTTGGAAACTAGCAAGTaGATTCTAACCAAGAATACA | + |
|
Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGLETSK*ILTKNT Trigger: TGTATTCTTGGTTAGAATGCACTTGCTAGTTTCCAA...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCTTTCTTGGACTTTCCTaGACTTATATTTCTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: VSGKYGTRHFTDLSEASGFLGLS*TYISET Trigger: TGTCTCAGAAATATAAGTCCAGGAAAGTCCAAGAAA...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR TCA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATACAGCAGGACATTATTaGAAACAGCTGCCTTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYTAGHY*KQLPCS Trigger: ACTACAAGGCAGCTGTTTTCAATAATGTCCTGCTGT...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR TCA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATTTATGGAAAGTGACATaGCAAGAAGCCATGTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYLWKVT*QEAMCA Trigger: AGCACACATGGCTTCTTGTCATGTCACTTTCCATAA...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCTCCTTGGAACTTAACTaGTTTTCTCTAATTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: QYEGIIITSLFCPQPCIFSLELN*FSLIVC Trigger: ACAGACAATTAGAGAAAAGCAGTTAAGTTCCAAGGA...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGTAGAGAAATAGTCTGTAAGGGCACCAATGTTTGTGGCTCTTCCATTTTTATCTCTGAATTCATTTaGATCCCGGAAAACAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESREIVCKGTNVCGSSIFISEFI*IPENNS Trigger: AGAATTGTTTTCCGGGATGCAAATGAATTCAGAGAT...AAAAATGGAAGAGCCACAAACATTGGTGCCCTTACAGACTATTTCTCTACTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGTAGAGAAATAGTCTGTAAGGGCACCAATGTTTGTGGCTCTTCCATTTTTTTTCGAATTCTCCAATaGCTTCTTGAATTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESREIVCKGTNVCGSSIFFRILQ*LLEFFS Trigger: AGAGAAGAATTCAAGAAGCCATTGGAGAATTCGAAA...AAAAATGGAAGAGCCACAAACATTGGTGCCCTTACAGACTATTTCTCTACTCTC 38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCGGGATGGTGGTGGGGTaGGGGGAGGCCGGTACGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLGMVVG*GEAGTG Trigger: TCCCGTACCGGCCTCCCCCAACCCCACCACCATCCC...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR GCA 72 bp | TTCCTGAAGGTGGGGAAAGGTCACACCTGTGCCTTCTaGACTTCATGGTGGACACTGAGCAAGGCCTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: FLKVGKGHTCAF*TSWWTLSKAYY Trigger: GTAGTAGGCCTTGCTCAGTGTCCACCATGAAGTGCAGAAGGCACAGGTGTGACCTTTCCCCACCTTCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | CCAGTGGCTGTAACAGCCGAATTAGCCATAATTCTCTaGTTCATACGGTGGAGCCACTGGGATTCAGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PVAVTAELAIIL*FIRWSHWDSAP Trigger: GGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCGAATTAGCCATAATTCTCTGGTTCATACGGTGGAGCCACTGGGATTCAGCGCTCCTCTTTGCAGGTaGCTGGCAGTTCCTTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SRISHNSLVHTVEPLGFSAPLCR*LAVPWN Trigger: GTTCCAAGGAACTGCCAGCAACCTGCAAAGAGGAGC...GCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | GGTTTTAAACAACAGAAGCTGAGACTCTTGCGCAGGTaGGGAGATGCTGCTCCTCTTTGCAGGTTGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFKQQKLRLLRR*GDAAPLCRLLA Trigger: TGCCAGCAACCTGCAAAGAGGAGCAGCATCTCCTCACCTGCGCAAGAGTCTCAGCTTCTGTTGTTTAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | GGAGGTGAAGGGATAGATGCTGATAGTAGTGAGGCCTaGAGGGATCCTAAGACCAGATTACCCAGGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GGEGIDADSSEA*RDPKTRLPRKN Trigger: GTTCTTCCTGGGTAATCTGGTCTTAGGATCCCTCCAGGCCTCACTACTATCAGCATCTATCCCTTCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | CCCAGGAAGAACACAAATTCAGCTATTCCCAATGCATaGGTCTGGGTAACCCAGGTGTGGTTTTGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRKNTNSAIPNA*VWVTQVWFWSQ Trigger: CTGGGACCAAAACCACACCTGGGTTACCCAGACTCATGCATTGGGAATAGCTGAATTTGTGTTCTTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | CCTTCTGCTATCTTCCTACAGTGGGAAGAGAGGCCATaGACCATCCCCTGCAGGAGAAATAAACCTCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSAIFLQWEERP*TIPCRRNKPQR Trigger: TCTCTGAGGTTTATTTCTCCTGCAGGGGATGGTTCATGGCCTCTCTTCCCACTGTAGGAAGATAGCAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | ACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGTaGAGCCACTGGGATTCAGCTCCCACTCATGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TAELAIILWFIR*SHWDSAPTHAK Trigger: CTTAGCATGAGTGGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAATTCGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCCAAGTTTCTAGACTTTaGGCCCAACCTCCCGACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSGKYGTRHFTDLSEASGQVSRL*AQPPDF Trigger: AAAGTCGGGAGGTTGGGCCAAAAGTCTAGAAACTTG...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | CCCTTGAAAAGGAGAGGTACTGCACCTTTGCAAAATTaGACTGGCTCACTGCAGCTGAGCAACAGAACCACT | + |
|
Preference number: 3 (lower is better) Translates to: PLKRRGTAPLQN*TGSLQLSNRTT Trigger: AGTGGTTCTGTTGCTCAGCTGCAGTGAGCCAGTTCAATTTTGCAAAGGTGCAGTACCTCTCCTTTTCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCAGATGCTGCTCCTCTTaGCAGGTTGCTGGCAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QYEGIIITSLFCPQPCIFRCCSS*QVAGSS Trigger: GGAACTGCCAGCAACCTGCAAAGAGGAGCAGCATCT...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGCCAGTGGCTGTAACAGCCGAATTAGCCATAATTCTCTGGTTCATACGGTTCTCCAATGGCTTCTaGAATTCTTCTCTTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQPVAVTAELAIILWFIRFSNGF*NSSLAL Trigger: CAGGGCAAGAGAAGAATTCAAGAAGCCATTGGAGAA...CCGTATGAACCAGAGAATTATGGCTAATTCGGCTGTTACAGCCACTGGCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATGAAAAGACAGGGGCCTaGGTCCAGGTTCCATGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYEKTGA*VQVPCK Trigger: TTTGCATGGAACCTGGACCAAGGCCCCTGTCTTTTC...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCCTTGCCTCCTGGTTCTaGAGAAGGTGTCACACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLLASWF*RRCHTD Trigger: ATCTGTGTGACACCTTCTCAAGAACCAGGAGGCAAG...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTTTGGTTTGCTTTTGTTaGGTTTTTGGTGCCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DSALNGFQEVWFLDGYCTLVCFC*VFGAVQ Trigger: CTGCACGGCACCAAAAACCAAACAAAAGCAAACCAA...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCCATGGCTACAGTCATTaGTACCACCTACATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLHGYSH*YHLHAS Trigger: GGAGGCATGTAGGTGGTACAAATGACTGTAGCCATG...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | CAATCCACTCAAACAGTCCACTTTGTGCTTTATGCCTaGCTTCTTGTGCCCACCTCAGCAATCCCCATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QSTQTVHFVLYA*LLVPTSAIPIV Trigger: TACAATGGGGATTGCTGAGGTGGGCACAAGAAGTCAGGCATAAAGCACAAAGTGGACTGTTTGAGTGGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR TCA 72 bp | TCCCTTAAGGCTGAGGGAAAGCAACTCATTAAACTGTaGGTGCAGCATCGTGTACTCTCCCATCCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLKAEGKQLIKL*VQHRVLSHPLE Trigger: TTCCAATGGATGGGAGAGTACACGATGCTGCACTCACAGTTTAATGAGTTGCTTTCCCTCAGCCTTAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR GCA 72 bp | GTGTGCTCATGGCTACAGTCATTTGTACCACCTACATaGCTCCAACAGATACATAGGGTGTCTGGGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VCSWLQSFVPPT*LQQIHRVSGFL Trigger: CAAAAACCCAGACACCCTATGTATCTGTTGGAGGCATGTAGGTGGTACAAATGACTGTAGCCATGAGCACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | TTAGCCATAATTCTCTGGTTCATACGGTGGAGCCACTaGGATTCAGCTCCCACTCATGCTAAGCCATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAIILWFIRWSH*DSAPTHAKPFL Trigger: AAGAAATGGCTTAGCATGAGTGGGAGCTGAATCCCAGTGGCTCCACCGTATGAACCAGAGAATTATGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | AGTCAGCATTCGCGTTCACTTCAGTCCATTCACAAATaGATTCAGCTTCTACCGGGTGCAACGCTTGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SQHSRSLQSIHK*IQLLPGATLES Trigger: TGATTCAAGCGTTGCACCCGGTAGAAGCTGAATCCATTTGTGAATGGACTGAAGTGAACGCGAATGCTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | TCCCGACTTTCCAGACTCCTGAGGACTTTGGTTCAATaGATAGTGACATGGGCTTGGAGAAAAGGGTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLSRLLRTLVQ*IVTWAWRKGFY Trigger: GTAAAACCCTTTTCTCCAAGCCCATGTCACTATCCATTGAACCAAAGTCCTCAGGAGTCTGGAAAGTCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | CGTCTGGACTCTGCTTTGAACGGTTTTCAGGAAGTGTaGTTTCTGGATGGGTACTGCACTTCATGGATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLDSALNGFQEV*FLDGYCTSWIC Trigger: ACAAATCCATGAAGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTCCAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATTTTATGCCTGACTTCTaGTGCCCACCTCAGCAATCC | + |
|
Preference number: 3 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYFMPDF*CPPQQS Trigger: GGATTGCTGAGGTGGGCACAAGAAGTCAGGCATAAA...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCATGCTAAGCCATTTCTaGGTAAAGACCTCCATACTT | + |
|
Preference number: 3 (lower is better) Translates to: VSGKYGTRHFTDLSEASGMLSHF*VKTSIL Trigger: AAGTATGGAGGTCTTTACCAAGAAATGGCTTAGCAT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAATACCGGGTGCAACGCTaGAATCATTCATCCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: SPCLQISIVPSPWMRVSEYRVQR*NHSSII Trigger: AATGATGGATGAATGATTCAAGCGTTGCACCCGGTA...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGCTTTGAACGGTTTTCAGGAAGTGTGGTTTCTGGATGGGTACTGCACTACTGACTCTCCATGTTaGCAGATTTCTATTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: DSALNGFQEVWFLDGYCTTDSPC*QISIVP Trigger: AGGGACAATAGAAATCTGCAAACATGGAGAGTCAGT...AGTGCAGTACCCATCCAGAAACCACACTTCCTGAAAACCGTTCAAAGCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR GCA 72 bp | ATTACCCAGGAAGAACACAAATTCAGCTATTCCCAATaGATGAGTCTGGGTAACCCAGGTGTGGTTTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ITQEEHKFSYSQ*MSLGNPGVVLV Trigger: GACCAAAACCACACCTGGGTTACCCAGACTCATGCATTGGGAATAGCTGAATTTGTGTTCTTCCTGGGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR GCA 72 bp | AACAAAGCATCCTCAGCAACTCTAGTGCCTGAAGTGTaGAGCCATTTACAGACCACTCAATATGAGGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: NKASSATLVPEV*SHLQTTQYEGI Trigger: AATGCCCTCATATTGAGTGGTCTGTAAATGGCTGCACACTTCAGGCACTAGAGTTGCTGAGGATGCTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR GCA 72 bp | AACCTCCAAATTCCCACATACACCATGCTCAGAGTATaGCCCTGCTCATTTTCTTGGACTTTCCTGGACTTA | + |
|
Preference number: 3 (lower is better) Translates to: NLQIPTYTMLRV*PCSFSWTFLDL Trigger: TAAGTCCAGGAAAGTCCAAGAAAATGAGCAGGGGCATACTCTGAGCATGGTGTATGTGGGAATTTGGAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR CCA 72 bp | CAGGAAGTGTGGTTTCTGGATGGGTACTGCACTTCATaGATTTGTTTGAATTGCCCATGCAGCTGTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: QEVWFLDGYCTS*ICLNCPCSCVC Trigger: ACAAACACAGCTGCATGGGCAATTCAAACAAATCCATGAAGTGCAGTACCCATCCAGAAACCACACTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCGTTGCTGGCAGTTCCTaGGAACTTAACTGCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLVAGSS*ELNCFS Trigger: AGAAAAGCAGTTAAGTTCCAAGGAACTGCCAGCAAC...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCTGCATAATAAGCACGTaGGTATTTACACAGAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: VSGKYGTRHFTDLSEASGCIIST*VFTQRL Trigger: TAGTCTCTGTGTAAATACCAACGTGCTTATTATGCA...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CAA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATCTCCCTAATCAAAACTaGCCATTAAGAGTGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYLPNQN*PLRVLQ Trigger: CTGCAGCACTCTTAATGGCAAGTTTTGATTAGGGAG...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 72 bp | CAAATTCCCACATACACCATGCTCAGAGTATGCCCCTaGTCATTTTCTTGGACTTTCCTGGACTTATATTTC | + |
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Preference number: 3 (lower is better) Translates to: QIPTYTMLRVCP*SFSWTFLDLYF Trigger: GAAATATAAGTCCAGGAAAGTCCAAGAAAATGAGCAGGGGCATACTCTGAGCATGGTGTATGTGGGAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CAA 90 bp | GAGAGTAGAGAAATAGTCTGTAAGGGCACCAATGTTTGTGGCTCTTCCATTTTTCCGGCAAGTGCCAGTTaGTTGAAATTTCAAGATGGT | + |
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Preference number: 3 (lower is better) Translates to: ESREIVCKGTNVCGSSIFPASAS*LKFQDG Trigger: ACCATCTTGAAATTTCAACAAACTGGCACTTGCCGG...AAAAATGGAAGAGCCACAAACATTGGTGCCCTTACAGACTATTTCTCTACTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 72 bp | TCACAAATGGATTCAGCTTCTACCGGGTGCAACGCTTaGATCATTCATCCATCATTTGCCAACTTTGATTGT | + |
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Preference number: 3 (lower is better) Translates to: SQMDSASTGCNA*IIHPSFANFDC Trigger: ACAATCAAAGTTGGCAAATGATGGATGAATGATTCAAGCGTTGCACCCGGTAGAAGCTGAATCCATTTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR-3UTR CAA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCCCATTCAATTCAAAGTaGCCTAGGTCTATGACATTT | + |
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Preference number: 3 (lower is better) Translates to: QYEGIIITSLFCPQPCIFPFNSK*PRSMTF Trigger: AAATGTCATAGACCTAGGCAACTTTGAATTGAATGG...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 72 bp | ATAGAACAATACTCAGAAGTGGATTATCTAGGGGCCTaGGAAACCATGATCCACATCACACATTATCCATGT | + |
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Preference number: 3 (lower is better) Translates to: IEQYSEVDYLGA*ETMIHITHYPC Trigger: ACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCCACTTCTGAGTATTGTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 72 bp | TTTCGAATTCTCCAATGGCTTCTTGAATTCTTCTCTTaGCCTGTCCATGATTGTGTAAAGTTGCATTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: FRILQWLLEFFS*PVHDCVKLHSF Trigger: AAAGGAATGCAACTTTACACAATCATGGACAGGGCAAGAGAAGAATTCAAGAAGCCATTGGAGAATTCGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR TCA 72 bp | CTCAGAGATTGGTTAAGACATAAAAACCCACCACTATaGCATTTACCACTTAATCTTACAAAGGCAGGTCAA | + |
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Preference number: 3 (lower is better) Translates to: LRDWLRHKNPPL*HLPLNLTKAGQ Trigger: TTGACCTGCCTTTGTAAGATTAAGTGGTAAATGTCATAGTGGTGGGTTTTTATGTCTTAACCAATCTCTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR GCA 72 bp | CATCGTGTACTCTCCCATCCATTGGAAACTAGCAAGTaGATTCTAACCAAGAATACAAACTTTCTAACATTA | + |
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Preference number: 3 (lower is better) Translates to: HRVLSHPLETSK*ILTKNTNFLTL Trigger: TAATGTTAGAAAGTTTGTATTCTTGGTTAGAATGCACTTGCTAGTTTCCAATGGATGGGAGAGTACACGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR TCA 90 bp | CTTGAAAAGGAGAGGTACTGCACCTTTGCAAAATTGAACTGGCTCACTGCAGCTCCGCCATCGACAGCGTaGGGCGGCTCTTGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LEKERYCTFAKLNWLTAAPPSTA*GGSWSR Trigger: GCGGCTCCAAGAGCCGCCTCACGCTGTCGATGGCGG...AGCTGCAGTGAGCCAGTTCAATTTTGCAAAGGTGCAGTACCTCTCCTTTTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR TCA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCGCTTCGAGTCCACGGTaGTGGAGGTGCCCTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSGKYGTRHFTDLSEASGASSPR*WRCPPG Trigger: TCCCGGAGGGCACCTCCATCACCGTGGACTCGAAGC...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR TCA 90 bp | GAGAGTAGAGAAATAGTCTGTAAGGGCACCAATGTTTGTGGCTCTTCCATTTTTCCAGGAACTCGCTCTTaGGCGCGCGGCGCGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: ESREIVCKGTNVCGSSIFPGTRS*ARGAAR Trigger: GCGGGCCGCGCCGCGCGCTCAAGAGCGAGTTCCTGG...AAAAATGGAAGAGCCACAAACATTGGTGCCCTTACAGACTATTTCTCTACTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCGGCAGCGCGATGGTCTaGCCGCTCTGCAGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QYEGIIITSLFCPQPCIFGSAMV*PLCRPP Trigger: CGGCGGCCTGCAGAGCGGCCAGACCATCGCGCTGCC...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCGCGCGGGCAGCGCGATaGTCTGGCCGCTCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QYEGIIITSLFCPQPCIFARAAR*SGRSAG Trigger: GCCTGCAGAGCGGCCAGACCATCGCGCTGCCCGCGC...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 72 bp | GGCCCAACCTCCCGACTTTCCAGACTCCTGAGGACTTaGGTTCAATGGATAGTGACATGGGCTTGGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GPTSRLSRLLRT*VQWIVTWAWRK Trigger: TTTTCTCCAAGCCCATGTCACTATCCATTGAACCAAAGTCCTCAGGAGTCTGGAAAGTCGGGAGGTTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR GCA 90 bp | TCTCCATGTTTGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGGGTCAGTGAAACACCCCGTACTTGTTaGAGCCGACGTCGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SPCLQISIVPSPWMRVSETPRTC*SRRRRR Trigger: TCTTCTTCGACGTCGGCTGCAACAAGTACGGGGTGT...TTCACTGACCCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 72 bp | AGATGCTGCTCCTCTTTGCAGGTTGCTGGCAGTTCCTaGGAACTTAACTGCTTTTCTCTAATTGTCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: RCCSSLQVAGSS*ELNCFSLIVCD Trigger: GTCACAGACAATTAGAGAAAAGCAGTTAAGTTCCAAGGAACTGCCAGCAACCTGCAAAGAGGAGCAGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CCA 90 bp | CAATATGAGGGCATTATTATAACCAGCCTCTTTTGCCCACAACCCTGCATTTTCTCCCTCTGTCGCTCCTaGATCTCTTTCATTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: QYEGIIITSLFCPQPCIFSLCRS*ISFISS Trigger: AGATGAAATGAAAGAGATCCAGGAGCGACAGAGGGA...GAAAATGCAGGGTTGTGGGCAAAAGAGGCTGGTTATAATAATGCCCTCATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 72 bp | GAAAGACAGCTGGATAAACCGGCAAGTGCCAGTTTGTaGAAATTTCAAGATGGTATAAAAATGCTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ERQLDKPASASL*KFQDGIKMLPG Trigger: TCCTGGAAGCATTTTTATACCATCTTGAAATTTCAACAAACTGGCACTTGCCGGTTTATCCAGCTGTCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 72 bp | TTCAAAAAGCTAGTATTTATGACTGACTCTCCATGTTaGCAGATTTCTATTGTCCCTAGTCCCTGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: FKKLVFMTDSPC*QISIVPSPWMR Trigger: CCTCATCCAGGGACTAGGGACAATAGAAATCTGCAAACATGGAGAGTCAGTCATAAATACTAGCTTTTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| 3UTR CAA 72 bp | TATGTTTTGTTTTGTGCAGCATATGCACTGAAGGACTaGCTGACAAGAACTGCCATTATAGACATGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: YVLFCAAYALKD*LTRTAIIDMLK Trigger: TTTCAGCATGTCTATAATGGCAGTTCTTGTCAGCAAGTCCTTCAGTGCATATGCTGCACAAAACAAAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS GCA 90 bp | AATCCTCATCCACTTCCTCACCCTCCGACTCGTCGCCGCCACCGCTaGCCCCGCCGCGTCGCTCGTAAAGCTTATCCCTCTGTCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: NPHPLPHPPTRRRHR*PRRVARKAYPSVAP Trigger: AGGAGCGACAGAGGGATAAGCTTTACGAGCGACGCGGCGGGGGCAGCGGTGGCGGCGACGAGTCGGAGGGTGAGGAAGTGGATGAGGATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CAA 90 bp | GTTAGTGGTAAATACGGGACCCGCCATTTTACAGACCTGTCTGAAGCTTCTGGCACCAGGAACTCGCTCTaGAGCGCGCGGCGCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: VSGKYGTRHFTDLSEASGTRNSL*SARRGP Trigger: CGGGCCGCGCCGCGCGCTCAAGAGCGAGTTCCTGGT...GCCAGAAGCTTCAGACAGGTCTGTAAAATGGCGGGTCCCGTATTTACCACTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CAA 90 bp | CTTGAAAAGGAGAGGTACTGCACCTTTGCAAAATTGAACTGGCTCACTGCAGCTAAGGCGCCTCCAAACTaGCCCCAGGCCTTGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: LEKERYCTFAKLNWLTAAKAPPN*PQALKG Trigger: GCCCTTCAAGGCCTGGGGCAAGTTTGGAGGCGCCTT...AGCTGCAGTGAGCCAGTTCAATTTTGCAAAGGTGCAGTACCTCTCCTTTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CAA 90 bp | GACACCTCTTCAAGTGAAGTACAACATGGAAAAGGAGCAAAAAGATGGAGGCTCAGGAACACCCCGTACTaGTTGCAGCCGACGTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: DTSSSEVQHGKGAKRWRLRNTPY*LQPTSK Trigger: CTTCGACGTCGGCTGCAACAAGTACGGGGTGTTCCT...GAGCCTCCATCTTTTTGCTCCTTTTCCATGTTGTACTTCACTTGAAGAGGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS-3UTR CAA 90 bp | GGATTATCTAGGGGCCTGAGAAACCATGATCCACATCACACATTATCCATGTATAACACCCCGTACTTGTaGCAGCCGACGTCGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GLSRGLRNHDPHHTLSMYNTPYL*QPTSKK Trigger: CTTCTTCGACGTCGGCTGCAACAAGTACGGGGTGTT...ATACATGGATAATGTGTGATGTGGATCATGGTTTCTCAGGCCCCTAGATAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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| CDS GCA 72 bp | CCACTTCCTCACCCTCCGACTCGTCGCCGCCACCGCTaGCCCCGCCGCGTCGCTCGTAAAGCTTATCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PLPHPPTRRRHR*PRRVARKAYPS Trigger: AGAGGGATAAGCTTTACGAGCGACGCGGCGGGGGCAGCGGTGGCGGCGACGAGTCGGAGGGTGAGGAAGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179343.3 |
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