Pregenerated sensors for PURA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043991Ensembl transcript IDs: ENSMUST00000051301.6
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACTGTCCAATGGGAGAGGTGCTGACACCTTCCCAGTCCTACAGGTaGTTTCTTCTACATACAGCAGGTAGAGCTAGATGGCTGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: YCPMGEVLTPSQSYR*FLLHTAGRARWLAL Trigger: CAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACCACCTGTAGGACTGGGAAGGTGTCAGCACCTCTCCCATTGGACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 90 bp | GGTGGTTTCTTCTACATACAGCAGGTAGAGCTAGATGGCTGGCTTTaGCAAGAAACAATTGCATGTCCAGAACTCTCTCTGTCAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: GGFFYIQQVELDGWL*QETIACPELSLSDK Trigger: CTTGTCTGACAGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | CCTACAGGTGGTTTCTTCTACATACAGCAGGTAGAGCTAGATGGCTaGCTTTGCCAAGAAACAATTGCATGTCCAGAACTCTCTCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: PTGGFFYIQQVELDG*LCQETIACPELSLS Trigger: TGACAGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACCACCTGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | CAGTCCTACAGGTGGTTTCTTCTACATACAGCAGGTAGAGCTAGATaGCTGGCTTTGCCAAGAAACAATTGCATGTCCAGAACTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QSYRWFLLHTAGRAR*LALPRNNCMSRTLS Trigger: AGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACCACCTGTAGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 90 bp | CATACAGCAGGTAGAGCTAGATGGCTGGCTTTGCCAAGAAACAATTaGATGTCCAGAACTCTCTCTGTCAGACAAGATACAAGATCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTAGRARWLALPRNN*MSRTLSVRQDTRSS Trigger: AGAGGATCTTGTATCTTGTCTGACAGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | TACTGTTTTATATGGTGGATAAAGTGGACAACATCCAGCGATGGGTaGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGGAGGTTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: YCFIWWIKWTTSSDG*QVKKRNCQLVEVLW Trigger: CCACAGAACCTCCACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCACTTTATCCACCATATAAAACAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | TGCTTACTGTTTTATATGGTGGATAAAGTGGACAACATCCAGCGATaGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGGAGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: CLLFYMVDKVDNIQR*VASQEEKLSVGGGS Trigger: AGAACCTCCACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCACTTTATCCACCATATAAAACAGTAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | CACTCACTCACTCACTCACTCACTCACTCACTCACTCTCCAAATCTaGTGGCTGATCTTTGAATCAAATTACTTGACAGTGTCTCTCATT | + |
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Preference number: 1 (lower is better) Translates to: HSLTHSLTHSLTLQI*WLIFESNYLTVSLI Trigger: AATGAGAGACACTGTCAAGTAATTTGATTCAAAGATCAGCCACCAGATTTGGAGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 90 bp | ACTTTGCCTAAGTTTGCTGTGTTTTTGTTGACTTGCACTACTGACTaGTGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTC | + |
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Preference number: 1 (lower is better) Translates to: TLPKFAVFLLTCTTD*WLLQNTDLGVLQQL Trigger: GAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAACTTAGGCAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | TTGCCTAAGTTTGCTGTGTTTTTGTTGACTTGCACTACTGACTGCTaGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTA | + |
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Preference number: 1 (lower is better) Translates to: LPKFAVFLLTCTTDC*LLQNTDLGVLQQLV Trigger: TACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAACTTAGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 90 bp | CAAAGAAAGGACACTTTGCCTAAGTTTGCTGTGTTTTTGTTGACTTaGACTACTGACTGCTGGCTACTACAAAACACTGATCTAGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: QRKDTLPKFAVFLLT*TTDCWLLQNTDLGV Trigger: TACTCCTAGATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAACTTAGGCAAAGTGTCCTTTCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 90 bp | TCACTCACTCACTCACTCACTCACTCACTCACTCTCCAAATCTGGTaGCTGATCTTTGAATCAAATTACTTGACAGTGTCTCTCATTTTA | + |
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Preference number: 1 (lower is better) Translates to: SLTHSLTHSLTLQIW*LIFESNYLTVSLIL Trigger: TAAAATGAGAGACACTGTCAAGTAATTTGATTCAAAGATCAGCCACCAGATTTGGAGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR TCA 90 bp | TTCATACCCTACACTTTGAATATGAGTGATAATAGAACATACTTTTaGCAGAAGGCGTGTACACTTGGGAACACAAATACACTTAGCATA | + |
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Preference number: 1 (lower is better) Translates to: FIPYTLNMSDNRTYF*QKACTLGNTNTLSI Trigger: TATGCTAAGTGTATTTGTGTTCCCAAGTGTACACGCCTTCTGTCAAAAGTATGTTCTATTATCACTCATATTCAAAGTGTAGGGTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCAAAGTACCGAGCACCTaGGAGGGGAAATGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSKVPST*EGKCRG Trigger: CCCCCTACATTTCCCCTCCCAGGTGCTCGGTACTTT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCCCCTCTGTGGCTGGATaGCTGCTGCTTCTAACATCA | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSPSVAG*LLLLTS Trigger: TGATGTTAGAAGCAGCAGTCATCCAGCCACAGAGGG...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCGAAACTGTCAGTTGGTaGAGGTTCTGTGGGTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSETVSW*RFCGWC Trigger: GCACCACCCACAGAACCTCCACCAACTGACAGTTTC...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCCTAGATGGCTGGCTTTaGCAAGAAACAATTGCATGT | + |
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Preference number: 2 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGLDGWL*QETIAC Trigger: ACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAG...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCAGAGAAACTGTCAGTTaGTGGAGGTTCTGTGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSRETVS*WRFCGW Trigger: CCACCCACAGAACCTCCACCAACTGACAGTTTCTCT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCGCAGGTAGAGCTAGATaGCTGGCTTTGCCAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSAGRAR*LALPRN Trigger: GTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGC...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTAGCTCCCTCTGTGGCTaGATGACTGCTGCTTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSISSLCG*MTAASN Trigger: GTTAGAAGCAGCAGTCATCCAGCCACAGAGGGAGCT...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCAGGTTCACTGGAAATTaGTGCACGTTAGTTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGRFTGN*CTLVRF Trigger: AAACCTAACTAACGTGCAGCAATTTCCAGTGAACCT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTGGAGGTTCTGTGGGTaGTGCTCCCTTGGAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIWRFCG*CSLGVF Trigger: AAAAACTCCAAGGGAGCACCACCCACAGAACCTCCA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTGACAACATCCAGCGATaGGTGGCAAGTCAAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIDNIQR*VASQEE Trigger: CTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTC...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCCAAATACAGGTTCACTaGAAATTGCTGCACGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGQIQVH*KLLHVS Trigger: ACTAACGTGCAGCAATTTCCAGTGAACCTGTATTTG...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CAA 90 bp | GCATCTCAAAGAAAGGACACTTTGCCTAAGTTTGCTGTGTTTTTGTaGACTTGCACTACTGACTGCTGGCTACTACAAAACACTGATCTA | + |
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Preference number: 2 (lower is better) Translates to: ASQRKDTLPKFAVFL*TCTTDCWLLQNTDL Trigger: TAGATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAACTTAGGCAAAGTGTCCTTTCTTTGAGATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCCTCAGACACACAGCATaGCTAGCCCTCATATATATA | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSLRHTA*LALIYI Trigger: TATATATATGAGGGCTAGGCATGCTGTGTGTCTGAG...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTACCAGCTTGGTAAAGTaGTCTCCTAAGCTTGCGTTT | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSITSLVK*SPKLAF Trigger: AAACGCAAGCTTAGGAGAGCACTTTACCAAGCTGGT...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCACTTGCACTACTGACTaGTGGCTACTACAAAACACT | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSTCTTD*WLLQNT Trigger: AGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTATATGGTGGATAAAGTaGACAACATCCAGCGATGGG | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIIWWIK*TTSSDG Trigger: CCCATCGCTGGATGTTGTCCACTTTATCCACCATAT...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCGCTTACTGTTTTATATaGTGGATAAAGTGGACAACA | + |
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Preference number: 2 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGAYCFI*WIKWTT Trigger: TGTTGTCCACTTTATCCACCATATAAAACAGTAAGC...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCTTGCCAAGAAACAATTaGATGTCCAGAACTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSLPRNN*MSRTLS Trigger: AGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAA...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTGTGTTTTTGTTGACTTaGACTACTGACTGCTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIVFLLT*TTDCWL Trigger: TAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACAC...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTGCACTACTGACTGCTaGCTACTACAAAACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSICTTDC*LLQNTD Trigger: ATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCAATAGACTCACTACCTaGTATCCAAATACAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSNRLTT*YPNTGS Trigger: TGAACCTGTATTTGGATATCAGGTAGTGAGTCTATT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCTGGTGGCTGATCTTTaGATCAAATTACTTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSILVADL*IKLLDS Trigger: ACTGTCAAGTAATTTGATTCAAAGATCAGCCACCAG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCAACATGGCTTTCCTATaGACTTCCTTTGTTGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSNMAFL*TSFVVK Trigger: TTTGACAACAAAGGAAGTTCATAGGAAAGCCATGTT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCCTTACGAAAGAACTTaGATCTCAAAGAAAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIPYERT*ISKKGH Trigger: GTGTCCTTTCTTTGAGATGCAAGTTCTTTCGTAAGG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTAATAGAACATACTTTTaGCAGAAGGCGTGTACACTT | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSINRTYF*QKACTL Trigger: AAGTGTACACGCCTTCTGTCAAAAGTATGTTCTATT...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTGTCAAAGGCATGAATaGTTTCTACAGTTCTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSICQRHE*FLQFWL Trigger: TAACCAGAACTGTAGAAATCATTCATGCCTTTGACA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTTGTTGTCAAAGGCATaGATGATTTCTACAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSILLSKA*MISTVL Trigger: CAGAACTGTAGAAATCATTCATGCCTTTGACAACAA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTTCACTGGAAATTGCTaGACGTTAGTTAGGTTTTTA | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIFTGNC*TLVRFL Trigger: TAAAAACCTAACTAACGTGCAGCAATTTCCAGTGAA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTACTGTTTTATATGGTaGATAAAGTGGACAACATCC | + |
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Preference number: 2 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIYCFIW*IKWTTS Trigger: GGATGTTGTCCACTTTATCCACCATATAAAACAGTA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 72 bp | GCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTaGTGGAGGTTCTGTGGGTGGTGCTCCCTTGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: AMGGKSRRETVS*WRFCGWCSLGV Trigger: AACTCCAAGGGAGCACCACCCACAGAACCTCCACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR-3UTR CAA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCGCTAGATGGCTGGCTTaGCCAAGAAACAATTGCATG | + |
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Preference number: 3 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGARWLA*PRNNCM Trigger: CATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGC...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR CCA 72 bp | ATATGGTGGATAAAGTGGACAACATCCAGCGATGGGTaGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: IWWIKWTTSSDG*QVKKRNCQLVE Trigger: CTCCACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCACTTTATCCACCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 72 bp | GGTAGAGCTAGATGGCTGGCTTTGCCAAGAAACAATTaGATGTCCAGAACTCTCTCTGTCAGACAAGATACA | + |
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Preference number: 3 (lower is better) Translates to: GRARWLALPRNN*MSRTLSVRQDT Trigger: TGTATCTTGTCTGACAGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| 3UTR GCA 72 bp | TTCTACATACAGCAGGTAGAGCTAGATGGCTGGCTTTaGCAAGAAACAATTGCATGTCCAGAACTCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FYIQQVELDGWL*QETIACPELSL Trigger: CAGAGAGAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | GGTTTCTTCTACATACAGCAGGTAGAGCTAGATGGCTaGCTTTGCCAAGAAACAATTGCATGTCCAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GFFYIQQVELDG*LCQETIACPEL Trigger: GAGTTCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | AGGTGGTTTCTTCTACATACAGCAGGTAGAGCTAGATaGCTGGCTTTGCCAAGAAACAATTGCATGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RWFLLHTAGRAR*LALPRNNCMSR Trigger: TCTGGACATGCAATTGTTTCTTGGCAAAGCCAGCCATCTAGCTCTACCTGCTGTATGTAGAAGAAACCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTGTGGAGGACACCAGCTaGGTAAAGTGCTCTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIVEDTS*VKCSPK Trigger: CTTAGGAGAGCACTTTACCAAGCTGGTGTCCTCCAC...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTAAGAGAAACTGTCAGTaGGTGGAGGTTCTGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIKRNCQ*VEVLWV Trigger: CACCCACAGAACCTCCACCAACTGACAGTTTCTCTT...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | TTTTATATGGTGGATAAAGTGGACAACATCCAGCGATaGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FYMVDKVDNIQR*VASQEEKLSVG Trigger: ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCACTTTATCCACCATATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | CACTCACTCACTCACTCACTCACTCTCCAAATCTGGTaGCTGATCTTTGAATCAAATTACTTGACAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HSLTHSLTLQIW*LIFESNYLTVS Trigger: AGACACTGTCAAGTAATTTGATTCAAAGATCAGCCACCAGATTTGGAGAGTGAGTGAGTGAGTGAGTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | ACTCACTCACTCACTCACTCACTCACTCTCCAAATCTaGTGGCTGATCTTTGAATCAAATTACTTGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: THSLTHSLTLQI*WLIFESNYLTV Trigger: CACTGTCAAGTAATTTGATTCAAAGATCAGCCACCAGATTTGGAGAGTGAGTGAGTGAGTGAGTGAGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | ACCTCCAACATGTGTCTAGTAGAGGAAAAGCCAACATaGCTTTCCTATGAACTTCCTTTGTTGTCAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSNMCLVEEKPT*LSYELPLLSKA Trigger: TGCCTTTGACAACAAAGGAAGTTCATAGGAAAGCCATGTTGGCTTTTCCTCTACTAGACACATGTTGGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CCA 72 bp | TTTGCTGTGTTTTTGTTGACTTGCACTACTGACTGCTaGCTACTACAAAACACTGATCTAGGAGTACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FAVFLLTCTTDC*LLQNTDLGVLQ Trigger: TTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTTTGCTGTGTTTTTGTaGACTTGCACTACTGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIFAVFL*TCTTDC Trigger: GCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCTGAAATATAGAACCTaGGTAAAGTACCGAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: KLSVSFQQGLKSLAAFSILKYRT*VKYRAP Trigger: AGGTGCTCGGTACTTTACCAAGGTTCTATATTTCAG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR TCA 72 bp | GTGTCTAGTAGAGGAAAAGCCAACATGGCTTTCCTATaGACTTCCTTTGTTGTCAAAGGCATGAATGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSRGKANMAFL*TSFVVKGMNDF Trigger: GAAATCATTCATGCCTTTGACAACAAAGGAAGTTCATAGGAAAGCCATGTTGGCTTTTCCTCTACTAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR TCA 72 bp | TTTCCTATGAACTTCCTTTGTTGTCAAAGGCATGAATaGTTTCTACAGTTCTGGTTAGTTAACTTTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FPMNFLCCQRHE*FLQFWLVNFSS Trigger: GGAGCTAAAGTTAACTAACCAGAACTGTAGAAATCATTCATGCCTTTGACAACAAAGGAAGTTCATAGGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR TCA 72 bp | TACACTTTGAATATGAGTGATAATAGAACATACTTTTaGCAGAAGGCGTGTACACTTGGGAACACAAATACA | + |
|
Preference number: 3 (lower is better) Translates to: YTLNMSDNRTYF*QKACTLGNTNT Trigger: TGTATTTGTGTTCCCAAGTGTACACGCCTTCTGTCAAAAGTATGTTCTATTATCACTCATATTCAAAGTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTCTTGAGCGCCCGGCGTaGCTCGTCCTGTGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGLERPA*LVLCLG Trigger: GCCCAGGCACAGGACGAGCCACGCCGGGCGCTCAAG...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGTGCGGGCAGCGCAATaGTCTGGCCCTGCGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGVRAAQ*SGPAWS Trigger: GCTCCACGCAGGGCCAGACCATTGCGCTGCCCGCAC...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCGCAATGGTCTGGCCCTaGGTGGAGCCCAGGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGAMVWP*VEPRPG Trigger: GCCCGGCCTGGGCTCCACGCAGGGCCAGACCATTGC...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGCGCGTAGTGCTCGATaGAGTCGCCCAGGTAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGARSAR*SRPGSR Trigger: GCGACTACCTGGGCGACTTCATCGAGCACTACGCGC...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCGGCAGCGCAATGGTCTaGCCCTGCGTGGAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGGSAMV*PCVEPR Trigger: CCTGGGCTCCACGCAGGGCCAGACCATTGCGCTGCC...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTCCTTGTAGGGCACGGTaGTGGAGTTGCGGTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGPCRAR*WSCGRW Trigger: CCACCTACCGCAACTCCATCACCGTGCCCTACAAGG...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGCGGTGGTCTCCTCTTaGTGCTGCTGTTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGAVVSS*CCCCCW Trigger: CCAGCAGCAACAGCAGCAGCAAGAGGAGACCACCGC...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCCTGGGCCAGGTCGGGTaGCTGGCTGGGGCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSLGQVG*LAGAQL Trigger: CAGCTGGGCCCCAGCCAGCCACCCGACCTGGCCCAG...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTCCTGCAGTAGCAGGGTaGCAGCGGTGGTCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGPAVAG*QRWSPL Trigger: AAGAGGAGACCACCGCTGCCACCCTGCTACTGCAGG...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTGGCCGGGCCCCCGGTTaGCTGTCTGGCGGATGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIGRAPG*LSGGCA Trigger: TGCGCATCCGCCAGACAGTCAACCGGGGGCCCGGCC...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCGCGTGGCTCGTCCTGTaGCTGGGCCAGGTCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSAWLVL*LGQVGW Trigger: CCACCCGACCTGGCCCAGGCACAGGACGAGCCACGC...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGTGGTCTCCTCTTGCTaGTGCTGTTGCTGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGVVSSC*CCCCWW Trigger: CCACCAGCAGCAACAGCAGCAGCAAGAGGAGACCAC...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCGGCTCGTCCTGTGCCTaGGCCAGGTCGGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSGSSCA*ARSGGW Trigger: CCAGCCACCCGACCTGGCCCAGGCACAGGACGAGCC...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTTGCTGCTGTTGCTGCTaGTGGAGCTGCTCACAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGCCCCC*WSCSQA Trigger: CGCTTGTGAGCAGCTCCACCAGCAGCAACAGCAGCA...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCCAGGAACTCGCTCTTaGGCGCCCGGCGTGGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIPGTRS*APGVAR Trigger: ACGAGCCACGCCGGGCGCTCAAGAGCGAGTTCCTGG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCGTCTCCTCTTGCTGCTaGTGTTGCTGCTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGVSSCC*CCCWWS Trigger: GCTCCACCAGCAGCAACAGCAGCAGCAAGAGGAGAC...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | GTGGACAACATCCAGCGATGGGTGGCAAGTCAAGAAGAGAAACTGTCAGTTGGTGATCCATGTAGTACTTaGGGTTTTCGCGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VDNIQRWVASQEEKLSVGDPCST*GFRAPG Trigger: TCCTGGTGCGCGAAAACCGCAAGTACTACATGGATC...ACCAACTGACAGTTTCTCTTCTTGACTTGCCACCCATCGCTGGATGTTGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCCCTTCTTCCTCGCCCTaGAGTAGCAGGGTGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSPSSSP*SSRVAA Trigger: CGCTGCCACCCTGCTACTGCAGGGCGAGGAAGAAGG...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCAGGTGTGTCCGAACTTaGCCCACACCTTGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGRCVRT*PTPCRA Trigger: TGCCCTACAAGGTGTGGGCCAAGTTCGGACACACCT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCGCAGGGTGGCAGCGGTaGTCTCCTCTTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSAGWQR*SPLAAA Trigger: AGCAGCAGCAAGAGGAGACCACCGCTGCCACCCTGC...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCAGACATGGAGAGGGTaGGGCGGCTCTTGTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSIQTWRG*GGSCCR Trigger: GCGGCAACAAGAGCCGCCTCACCCTCTCCATGTCTG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCTCGATGAGACCCTGTaGGGGCAGCGCAATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSILDETL*GQRNGL Trigger: CAGACCATTGCGCTGCCCGCACAGGGTCTCATCGAG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTGCTGTTGCTGCTGGTaGAGCTGCTCACAAGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSICCCCW*SCSQAA Trigger: GGCCGCTTGTGAGCAGCTCCACCAGCAGCAACAGCA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR TCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTCTCCATAGTCGTCGATaGGCTTGGCCAGAGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSILHSRR*AWPERH Trigger: GTGACGCTCTGGCCAAGCTCATCGACGACTATGGAG...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR GCA 90 bp | AAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCATTTCTCCTCGGAGTACTTaGAGAAGGTGTGTCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLSVSFQQGLKSLAAFSISPRST*RRCVRT Trigger: AGTTCGGACACACCTTCTGCAAGTACTCCGAGGAGA...AATGGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CAA 72 bp | AGAAAGGACACTTTGCCTAAGTTTGCTGTGTTTTTGTaGACTTGCACTACTGACTGCTGGCTACTACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTLPKFAVFL*TCTTDCWLLQN Trigger: GTTTTGTAGTAGCCAGCAGTCAGTAGTGCAAGTCAACAAAAACACAGCAAACTTAGGCAAAGTGTCCTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CAA 72 bp | ATAATAGAACATACTTTTGACAGAAGGCGTGTACACTaGGGAACACAAATACACTTAGCATATAATGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIEHTFDRRRVH*GTQIHLAYNVA Trigger: GGCTACATTATATGCTAAGTGTATTTGTGTTCCCAAGTGTACACGCCTTCTGTCAAAAGTATGTTCTATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| 3UTR CAA 72 bp | TCTGTTTGCTTGTTTTTGGCACATTTGATCATACTGTaGTCAATGAGTAACACATATGGTCAAATATACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCLFLAHLIIL*SMSNTYGQIYP Trigger: GGGGTATATTTGACCATATGTGTTACTCATTGACAACAGTATGATCAAATGTGCCAAAAACAAGCAAACAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCAGGCCGGGCCCCCGGTaGACTGTCTGGCGGATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGRPGPR*TVWRMR Trigger: GCGCATCCGCCAGACAGTCAACCGGGGGCCCGGCCT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCACCAGGAACTCGCTCTaGAGCGCCCGGCGTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGTRNSL*SARRGS Trigger: CGAGCCACGCCGGGCGCTCAAGAGCGAGTTCCTGGT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CAA 90 bp | ATGAAATTATCTGTCTCCTTTCAGCAGGGGTTAAAATCACTAGCAGCTTTCTCCAGGGTGAGGCGGCTCTaGTTGCCGCCAGCGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MKLSVSFQQGLKSLAAFSRVRRL*LPPAPT Trigger: GGTGGGCGCTGGCGGCAACAAGAGCCGCCTCACCCT...GGAGAAAGCTGCTAGTGATTTTAACCCCTGCTGAAAGGAGACAGATAATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS GCA 90 bp | TCTCCCTCTGTTTCTCTTGAATCTTCTTCATCTCCTCGGAGTACTTaGAGAAGGTGTGTCCGAACTTGGCCCACACCTTGTAGGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSVSLESSSSPRST*RRCVRTWPTPCRAR Trigger: CCGTGCCCTACAAGGTGTGGGCCAAGTTCGGACACACCTTCTGCAAGTACTCCGAGGAGATGAAGAAGATTCAAGAGAAACAGAGGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
||
| CDS-3UTR CAA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCAGCGGTGGTCTCCTCTaGCTGCTGCTGTTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGSGGLL*LLLLLL Trigger: CAGCAGCAACAGCAGCAGCAAGAGGAGACCACCGCT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| CDS-3UTR CAA 90 bp | TGGCTACTACAAAACACTGATCTAGGAGTACTCCAACAACTCGTAGCACAAGGCATCTCCTCGGAGTACTaGCAGAAGGTGTGTCCGAAC | + |
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Preference number: 5 (lower is better) Translates to: WLLQNTDLGVLQQLVAQGISSEY*QKVCPN Trigger: GTTCGGACACACCTTCTGCAAGTACTCCGAGGAGAT...GCCTTGTGCTACGAGTTGTTGGAGTACTCCTAGATCAGTGTTTTGTAGTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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| CDS CAA 90 bp | CTGGTGGAGCTGCTCACAAGCGGCCCGCTTCTCCCTCTGTTTCTCTaGAATCTTCTTCATCTCCTCGGAGTACTTGCAGAAGGTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LVELLTSGPLLPLFL*NLLHLLGVLAEGVS Trigger: GGACACACCTTCTGCAAGTACTCCGAGGAGATGAAGAAGATTCAAGAGAAACAGAGGGAGAAGCGGGCCGCTTGTGAGCAGCTCCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051301.6 |
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