Pregenerated sensors for PUM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041360Ensembl transcript IDs: ENSMUST00000076219.6, ENSMUST00000235297.2, ENSMUST00000235859.2, ENSMUST00000236702.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTCCTTCTGTGCGCGTTGCCATCACCCTTCTGCAGAAGCTCGATaGGCTCGGGCACCGTGTGGGCGGGGTCTCTGGGGCTCATCAAGT | + |
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Preference number: 1 (lower is better) Translates to: VSFCARCHHPSAEAR*ARAPCGRGLWGSSS Trigger: ACTTGATGAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCTCATCGAGCTTCTGCAGAAGGGTGATGGCAACGCGCACAGAAGGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR CCA 90 bp | CCCCACTCTCCTCCTCACTCCATGCCTAGAGGATCCAGCCAACAGTaGCAGGTGTCATGCCTGGGAAAGGGCTTACTACACCCCAGCACG | + |
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Preference number: 1 (lower is better) Translates to: PHSPPHSMPRGSSQQ*QVSCLGKGLLHPST Trigger: CGTGCTGGGGTGTAGTAAGCCCTTTCCCAGGCATGACACCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CCA 90 bp | CCGTGCCACAGGCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTaGGCCAGGTACACCACTGCTTCCCGGATGGCTTCAATTAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PCHRQCMATLAPSCV*ARYTTASRMASISS Trigger: AGAACTAATTGAAGCCATCCGGGAAGCAGTGGTGTACCTGGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR GCA 90 bp | CAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTaGAGTGTCCTTCTGTGCGCGTTGCCATCACCCTTCTGCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: QQSWRDGLQELTPAD*SVLLCALPSPFCRS Trigger: GCTTCTGCAGAAGGGTGATGGCAACGCGCACAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR CCA 90 bp | ACTCCATGCCTAGAGGATCCAGCCAACAGTGGCAGGTGTCATGCCTaGGAAAGGGCTTACTACACCCCAGCACGAGAGGGCAGGAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: TPCLEDPANSGRCHA*ERAYYTPAREGRRV Trigger: GACTCTCCTGCCCTCTCGTGCTGGGGTGTAGTAAGCCCTTTCCCAGGCATGACACCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CCA 90 bp | TTGCCATCACCCTTCTGCAGAAGCTCGATGAGCTCGGGCACCGTGTaGGCGGGGTCTCTGGGGCTCATCAAGTACAAGAGGACTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LPSPFCRSSMSSGTV*AGSLGLIKYKRTFL Trigger: AAGGAAAGTCCTCTTGTACTTGATGAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCTCATCGAGCTTCTGCAGAAGGGTGATGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR GCA 90 bp | CAGAAGCAAATCAAACTGTCTTTCCCCACTCTCCTCCTCACTCCATaGCTAGAGGATCCAGCCAACAGTGGCAGGTGTCATGCCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QKQIKLSFPTLLLTP*LEDPANSGRCHAWE Trigger: TTCCCAGGCATGACACCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGGAAAGACAGTTTGATTTGCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR GCA 90 bp | CAGGCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTaGTCCACTATACACACTCTGTTTGAACTTCATGTCCTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: QAALATGFPEFRPLS*STIHTLFELHVLNS Trigger: AGAATTAAGGACATGAAGTTCAAACAGAGTGTGTATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CCA 90 bp | GACCCATCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCTaGACTGACCAGAGCAGCTTCCAAACAAACCTGATGGAACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: DPSSPDSSSTLPSMC*TDQSSFQTNLMELS Trigger: ACTGAGTTCCATCAGGTTTGTTTGGAAGCTGCTCTGGTCAGTCCAGCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGATGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR GCA 90 bp | CAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTaGTACACAAGTTCTCATGGTCTACAGATCTCCAGTTTTGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: QTCRAARTGLCTKNA*YTSSHGLQISSFAA Trigger: AGCGGCAAAACTGGAGATCTGTAGACCATGAGAACTTGTGTAGCAGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR GCA 90 bp | CAATTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATaGAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTGCTAC | + |
|
Preference number: 1 (lower is better) Translates to: QFLRGSDGRLSIYQT*RAARTGLCTKNACY Trigger: GTAGCAGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR TCA 90 bp | TATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGCCCTTTaGTCTCTAACAAAACACATACACATATACAAGCCATACAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: YSAEAGHSPRTHEAL*SLTKHIHIYKPYKE Trigger: CTCTTTGTATGGCTTGTATATGTGTATGTGTTTTGTTAGAGATCAAAGGGCTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| 3UTR TCA 90 bp | TCTGGAGACACTCGTAAAACAGTCTTTCTAGATAAATACCACTCTTaGCACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SGDTRKTVFLDKYHS*HITTKQDLGYSAEA Trigger: TGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAGAGTGGTATTTATCTAGAAAGACTGTTTTACGAGTGTCTCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTGCAGTGTCAGCTCGGGCACCGTGTaGGCGGGGTCTCTGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: QQSWRDGLQELTPADCSVSSGTV*AGSLGL Trigger: GAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCT...GACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGACAGGTAAGGCACAGACAATTCCTCAGAGGGTCAGATGGCCGCCTTAGTGTCCCCAGTGCAGGCTaGCCTGGCCACAGGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LGQVRHRQFLRGSDGRLSVPSAG*PGHRLP Trigger: GGGAAGCCTGTGGCCAGGGCAGCCTGCACTGGGGAC...ACTAAGGCGGCCATCTGACCCTCTGAGGAATTGTCTGTGCCTTACCTGTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTAGCAGCTGTCCCCAGTaGAGGCTGCCCTGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: PVVSMRDSTFSSGKRVPASSCPQ*RLPWPQ Trigger: CTGTGGCCAGGGCAGCCTGCACTGGGGACAGCTGCT...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR CCA 90 bp | TCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCTGGACTGACCAGAGCCAGTGCAGGCTGCCCTaGCCACAGGCTTCCCGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SSPDSSSTLPSMCWTDQSQCRLP*PQASRS Trigger: ACTCCGGGAAGCCTGTGGCCAGGGCAGCCTGCACTG...GCTCTGGTCAGTCCAGCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CAA 90 bp | TCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATaGCAGTGTCCTTCTGTGCGCGTTGCCATCACCCTTCTGCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SAKLERWTPRAHAGG*QCPSVRVAITLLQK Trigger: CTTCTGCAGAAGGGTGATGGCAACGCGCACAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCACTCTCCTCCTCACTCCATGCCTAGAGGATCCAGCCAACAGTGGCAGGACACTTCCCTCCATGTaGTGGACTGACCAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FPTLLLTPCLEDPANSGRTLPSM*WTDQSS Trigger: GCTGCTCTGGTCAGTCCAGCACATGGAGGGAAGTGT...CCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTGCAGTGGGCCAGGTACACCACTaGTTCCCGGATGGCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: LSKAGEMDSKSSRRRIAVGQVHH*FPDGFN Trigger: ATTGAAGCCATCCGGGAAGCAGTGGTGTACCTGGCC...CACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTCCTGTCCTTGGGTGTaGCGTGCCACAGGCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: PVVSMRDSTFSSGKRVPASCPWV*RATGSA Trigger: TGCACTGCCTGTGGCACGGCACACCCAAGGACAGGA...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAACCAAGTGAGAGTACTGGCCATTGGCAACCTTCTCCACATACGTCTTCAGCCACAGGCAGTGCATaGCCACTCTGGCGCCATCGT | + |
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Preference number: 2 (lower is better) Translates to: GEPSESTGHWQPSPHTSSATGSA*PLWRHR Trigger: ACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGC...TGAAGACGTATGTGGAGAAGGTTGCCAATGGCCAGTACTCTCACTTGGTTCTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTGCAGTGGAGAGTACTGGCCATTaGCAACCTTCTCCACATACG | + |
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Preference number: 2 (lower is better) Translates to: LSKAGEMDSKSSRRRIAVESTGH*QPSPHT Trigger: CGTATGTGGAGAAGGTTGCCAATGGCCAGTACTCTC...CACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTTCTCAAGCAGGGTCTaGATGCCTCTGCTGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PVVSMRDSTFSSGKRVPAFSSRV*MPLLLL Trigger: AAGCAGCAGCAGAGGCATCCAGACCCTGCTTGAGAA...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTGCAGTGTCAGGTCCTTTAACAAATaGATGCACAGAGCGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QQSWRDGLQELTPADCSVRSFNK*MHRASS Trigger: ACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT...GACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGCTCTAGTAACCATTTGAGAACCAGATGTCCTGCAGGATGCTCAGCAACATCCTTGGGTGTGCCGTaGCACAGGCAGTGCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: SCSSNHLRTRCPAGCSATSLGVP*HRQCMA Trigger: GGCCATGCACTGCCTGTGGCACGGCACACCCAAGGA...TGTTGCTGAGCATCCTGCAGGACATCTGGTTCTCAAATGGTTACTAGAGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCATTCCACCTTCTCCTCTaGGAAGCGGGTTCCCGCTTG | + |
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Preference number: 2 (lower is better) Translates to: FLRGSDGRLSIYQTCRAAFHLLL*EAGSRL Trigger: CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAA...TGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR GCA 90 bp | CTCATCAAGTACAAGAGGACTTTCCTTCCGTATTTGTCATTAACTATGCTGGGCCCGTGCCACAGGCAGTaGATGGCCACTCTGGCGCCA | + |
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Preference number: 2 (lower is better) Translates to: LIKYKRTFLPYLSLTMLGPCHRQ*MATLAP Trigger: TGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGG...GCCCAGCATAGTTAATGACAAATACGGAAGGAAAGTCCTCTTGTACTTGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCACAACTCTGAAGAAGGCTGGAAAGAATAATGGCACCTCGGTTGATGCTAGTGCATGGCCACTCTaGCGCCATCGTGTGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LVTTLKKAGKNNGTSVDASAWPL*RHRVCG Trigger: CCCACACACACGATGGCGCCAGAGTGGCCATGCACT...AGCATCAACCGAGGTGCCATTATTCTTTCCAGCCTTCTTCAGAGTTGTGACCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAATGCAGTTCTGCTGCTaGCAAACTGGCGATGGCATC | + |
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Preference number: 2 (lower is better) Translates to: MHRASSCEYERFHLLLWEMQFCC*QTGDGI Trigger: GATGCCATCGCCAGTTTGGCAGCAGCAGAACTGCAT...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR TCA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTCTCCATGTGCTGGACTaGCCAGAGCAGCTTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: VYIRHAEQQGQASVLKTPLHVLD*PEQLPN Trigger: GTTTGGAAGCTGCTCTGGTCAGTCCAGCACATGGAG...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCAGGTAGCTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGGAACTGATGATTTCTaGTATGATTATCTGCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: LQVAQQSWRDGLQELTPAGTDDF*YDYLLH Trigger: GTGAAGCAGATAATCATATCAGAAATCATCAGTTCC...CGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAGCTACCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATCTCTGTGAGTTTGAGGCCAGTTTGGTCTACACAATAAATTTCAAAACAAGTCTGCACGGCAGCTaGGGAAGCAGCTGTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: ADLCEFEASLVYTINFKTSLHGS*GSSCPQ Trigger: CTGGGGACAGCTGCTTCCTCAGCTGCCGTGCAGACT...TGTTTTGAAATTTATTGTGTAGACCAAACTGGCCTCAAACTCACAGAGATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTCCTTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCAGGATGCAGTTCTGCTaGTGCCAAACTGGCGATGGC | + |
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Preference number: 2 (lower is better) Translates to: RSFNKCMHRASSCEYERFRMQFC*CQTGDG Trigger: GCCATCGCCAGTTTGGCAGCAGCAGAACTGCATCCT...GAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | CTCATCAAGTACAAGAGGACTTTCCTTCCGTATTTGTCATTAACTATGCTGGGCTCACTTTCCTGTCCTTaGGTGTGCCGTGCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: LIKYKRTFLPYLSLTMLGSLSCP*VCRATG Trigger: GCCTGTGGCACGGCACACCCAAGGACAGGAAAGTGA...GCCCAGCATAGTTAATGACAAATACGGAAGGAAAGTCCTCTTGTACTTGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCAAGCAGGGTCTGGATaGCTCTGCTGCTGCTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FNKCMHRASSCEYERFHLQAGSG*LCCCFC Trigger: ACAAAAGCAGCAGCAGAGGCATCCAGACCCTGCTTG...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTTTTAGGGATTGTTCATaGGACAATGTCCTCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: DGRLSIYQTCRAARTGLCFRDCS*DNVLIL Trigger: GAGAATGAGGACATTGTCCCATGAACAATCCCTAAA...ACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR CCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTTGTCCTCATTCTCCTTaGAAGGTATTTACCCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: FNKCMHRASSCEYERFHLCPHSP*KVFTLK Trigger: CTTCAGGGTAAATACCTTCCAAGGAGAATGAGGACA...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTCACACTATGGGCTCTGACTATTTTAGGGATTGTTCATGGGACAATGTCGGAAGGTATTTACCCTaGAGGCCCAAATACAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSHTMGSDYFRDCSWDNVGRYLP*RPKYKD Trigger: ATCTTTGTATTTGGGCCTTCAGGGTAAATACCTTCC...GACATTGTCCCATGAACAATCCCTAAAATAGTCAGAGCCCATAGTGTGACTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR GCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTTGTACTAAAAACGCCTaGTACACAAGTTCTCATGGT | + |
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Preference number: 2 (lower is better) Translates to: FNKCMHRASSCEYERFHLCTKNA*YTSSHG Trigger: ACCATGAGAACTTGTGTAGCAGGCGTTTTTAGTACA...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR-3UTR TCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTGTTTCAGTCCACCTTTaGCTTTGTTTACAACTTCTT | + |
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Preference number: 2 (lower is better) Translates to: FNKCMHRASSCEYERFHLVSVHL*LCLQLL Trigger: AAGAAGTTGTAAACAAAGTCAAAGGTGGACTGAAAC...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTCTACACAATAAATTTCAAAACAGTCAGAGCTACATAGCAAGATCCTGCAGGTCCTTTAACAAATaGATGCACAGAGCGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FGLHNKFQNSQSYIARSCRSFNK*MHRASS Trigger: ACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT...GCAGGATCTTGCTATGTAGCTCTGACTGTTTTGAAATTTATTGTGTAGACCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CCA 72 bp | TGGGTGTGCCGTGCCACAGGCAGTGCATGGCCACTCTaGCGCCATCGTGTGTGTGGGCCAGGTACACCACTG | + |
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Preference number: 3 (lower is better) Translates to: WVCRATGSAWPL*RHRVCGPGTPL Trigger: CAGTGGTGTACCTGGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGGCACACCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR CCA 72 bp | AGGCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTaGGCCAGGTACACCACTGCTTCCCGGATGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RQCMATLAPSCV*ARYTTASRMAS Trigger: TGAAGCCATCCGGGAAGCAGTGGTGTACCTGGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR CCA 72 bp | CCCTTCTGCAGAAGCTCGATGAGCTCGGGCACCGTGTaGGCGGGGTCTCTGGGGCTCATCAAGTACAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PFCRSSMSSGTV*AGSLGLIKYKR Trigger: CCTCTTGTACTTGATGAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCTCATCGAGCTTCTGCAGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| 3UTR TCA 72 bp | CAAACAAACCTGATGGAACTCAGTCTGCACGGCAGCTaGGGAAGCAGCTGTCCCCAGTGCAGGCTGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QTNLMELSLHGS*GSSCPQCRLPW Trigger: CCAGGGCAGCCTGCACTGGGGACAGCTGCTTCCTCAGCTGCCGTGCAGACTGAGTTCCATCAGGTTTGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| 3UTR CCA 72 bp | CTAGAGGATCCAGCCAACAGTGGCAGGTGTCATGCCTaGGAAAGGGCTTACTACACCCCAGCACGAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LEDPANSGRCHA*ERAYYTPAREG Trigger: GCCCTCTCGTGCTGGGGTGTAGTAAGCCCTTTCCCAGGCATGACACCTGCCACTGTTGGCTGGATCCTCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR GCA 72 bp | GATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTaGTCATCCTGCTGCCTACGCAGTCAGCTTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DSTFSSGKRVPA*SSCCLRSQLLK Trigger: CTTGAGAAGCTGACTGCGTAGGCAGCAGGATGAGCAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| 3UTR GCA 72 bp | CTGCAGGATGCTCAGCAACATGAAGCTCTCCGTCCTTaGCACCAGGATGCAGTTCTGCTGCTGCCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQDAQQHEALRP*HQDAVLLLPNW Trigger: CCAGTTTGGCAGCAGCAGAACTGCATCCTGGTGGCAAGGACGGAGAGCTTCATGTTGCTGAGCATCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| 3UTR CCA 72 bp | TCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTaGGAAGCGGGTTCCCGCTTGCTCATCCTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSCEYERFHLLL*EAGSRLLILLP Trigger: AGGCAGCAGGATGAGCAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| 3UTR TCA 72 bp | TGTGCTGGACTGACCAGAGCAGCTTCCAAACAAACCTaGTGGAACTCAGTCTGCACGGCAGCTGAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CAGLTRAASKQT*WNSVCTAAEEA Trigger: TGCTTCCTCAGCTGCCGTGCAGACTGAGTTCCATCAGGTTTGTTTGGAAGCTGCTCTGGTCAGTCCAGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAATCACTTTCCTGTCCTaGGGTGTGCCGTGCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: MHRASSCEYERFHLLLWEITFLS*GVPCHR Trigger: CCTGTGGCACGGCACACCCAAGGACAGGAAAGTGAT...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| 3UTR GCA 72 bp | ATCAAACTGTCTTTCCCCACTCTCCTCCTCACTCCATaGCTAGAGGATCCAGCCAACAGTGGCAGGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IKLSFPTLLLTP*LEDPANSGRCH Trigger: ATGACACCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGGAAAGACAGTTTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR GCA 72 bp | CTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTaGTCCACTATACACACTCTGTTTGAACTTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LATGFPEFRPLS*STIHTLFELHV Trigger: GACATGAAGTTCAAACAGAGTGTGTATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR CCA 72 bp | AATACCACTCTTGACACATCACAACCAAACAGGATCTaGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: NTTLDTSQPNRI*GIVQRQDTPPE Trigger: TTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAGAGTGGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAATGTCCTCATTCTCCTaGGAAGGTATTTACCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: MHRASSCEYERFHLLLWEMSSFS*EGIYPE Trigger: TTCAGGGTAAATACCTTCCAAGGAGAATGAGGACAT...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTATCACAGATCAGACAGTaGACATTAAACCAAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MAALVYIRHAEQQGQASVSQIRQ*TLNQRS Trigger: AGACCTTTGGTTTAATGTCAACTGTCTGATCTGTGA...TACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTTACAGATCTCCAGTTTaGCCGCTGAAAGCCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FNKCMHRASSCEYERFHLYRSPV*PLKASC Trigger: ACAGCTGGCTTTCAGCGGCAAAACTGGAGATCTGTA...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTAATCACAGCTTCCTTTaGGGCCATCGGTGTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FNKCMHRASSCEYERFHLNHSFL*GHRCQN Trigger: ATTCTGACACCGATGGCCCAAAAGGAAGCTGTGATT...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| 3UTR TCA 72 bp | ACTCGTAAAACAGTCTTTCTAGATAAATACCACTCTTaGCACATCACAACCAAACAGGATCTGGGGTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: TRKTVFLDKYHS*HITTKQDLGYS Trigger: ACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAGAGTGGTATTTATCTAGAAAGACTGTTTTACGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCCACTCTCCTCCTCACTCCATGCCTAGAGGATCCAGCCAACAGTGGCAGGAGCTCGGGCACCGTGTaGGCGGGGTCTCTGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FPTLLLTPCLEDPANSGRSSGTV*AGSLGL Trigger: GAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCT...CCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTGCCGTGCCACAGGCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTGGGCCAGTTGGTCTTGTCACTaGGCTGCCTGCTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPCHRQCMATLAPSCVWASWSCH*AACSAS Trigger: TGAAGCAGAGCAGGCAGCTCAGTGACAAGACCAACT...GGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACTATACCGTGCCACAGGCAGTaGATGGCCACTCTGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AALATGFPEFRPLSCSTIPCHRQ*MATLAP Trigger: TGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGG...TATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | GTGCAGGCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACCAGGATGCAGTTCTaGTGCTGCCAAACTGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQAALATGFPEFRPLSCSTRMQF*CCQTGD Trigger: ATCGCCAGTTTGGCAGCAGCAGAACTGCATCCTGGT...GGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGCCTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR CAA 72 bp | CTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATaGCAGTGTCCTTCTGTGCGCGTTGCCATCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LERWTPRAHAGG*QCPSVRVAITL Trigger: AAGGGTGATGGCAACGCGCACAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGTAGCTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGCCGATGCCTCCGAATaGCGCAGCATCTTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQVAQQSWRDGLQELTPAADASE*RSIFLT Trigger: TGTGAGGAAGATGCTGCGGCATTCGGAGGCATCGGC...CGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAGCTACCTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGCCGTGCCACAGGCAGTaGATGGCCACTCTGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKPCHRQ*MATLAP Trigger: TGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGG...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACTATACGTTCCCATACTGAATaGAGCACTGGATCACGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AALATGFPEFRPLSCSTIRSHTE*STGSRA Trigger: CGCGCGTGATCCAGTGCTTCATTCAGTATGGGAACG...TATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACTATAAGTTGGTCTTGTCACTaGGCTGCCTGCTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AALATGFPEFRPLSCSTISWSCH*AACSAS Trigger: TGAAGCAGAGCAGGCAGCTCAGTGACAAGACCAACT...TATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACTATACAAGCAGGGTCTGGATaGCTCTGCTGCTGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AALATGFPEFRPLSCSTIQAGSG*LCCCFC Trigger: ACAAAAGCAGCAGCAGAGGCATCCAGACCCTGCTTG...TATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGTAGCTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGTCGCCTTGCAACTCTTaGAAAGCCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVAQQSWRDGLQELTPASPCNS*KACFLC Trigger: GCAGAGGAAGCAGGCTTTCCAAGAGTTGCAAGGCGA...CGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAGCTACCTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGGCGCCATCGTGTGTGTaGGCCAGGTACACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKAPSCV*ARYTTA Trigger: AGCAGTGGTGTACCTGGCCCACACACACGATGGCGC...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | GTGCCGTGCCACAGGCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTGGGCCATTTCCGCTTCTTGCTaGATTTATTTGCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPCHRQCMATLAPSCVWAISASC*IYLPSE Trigger: TTCAGAAGGCAAATAAATTCAGCAAGAAGCGGAAAT...GGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGCGTTCCCATACTGAATaGAGCACTGGATCACGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNRIWGIVQRQDTPPEHMRSHTE*STGSRA Trigger: CGCGCGTGATCCAGTGCTTCATTCAGTATGGGAACG...CATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCACTATAAACTCTTGGAAAGCCTaGTTCCTCTGCTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AALATGFPEFRPLSCSTINSWKA*FLCSSF Trigger: GAACGAGGAGCAGAGGAAGCAGGCTTTCCAAGAGTT...TATAGTGGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTTCCTTGGGTGTGCCGTaGCACAGGCAGTGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTSLGVP*HRQCMA Trigger: GGCCATGCACTGCCTGTGGCACGGCACACCCAAGGA...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTGCCACAGGCAGTGCATaGCCACTCTGGCGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTATGSA*PLWRHR Trigger: ACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGC...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAGGTAGCTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGCTTCACACCTTTCTTaGCAGGTTTTGTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQVAQQSWRDGLQELTPAASHLS*QVLWHL Trigger: AAGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGC...CGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAGCTACCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | CGTGTGGGCGGGGTCTCTGGGGCTCATCAAGTACAAGAGGACTTTCCTTCCGTAAACTCTTGGAAAGCCTaGTTCCTCTGCTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGGVSGAHQVQEDFPSVNSWKA*FLCSSF Trigger: GAACGAGGAGCAGAGGAAGCAGGCTTTCCAAGAGTT...TACGGAAGGAAAGTCCTCTTGTACTTGATGAGCCCCAGAGACCCCGCCCACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGACAGGTAAGGCACAGACAATTCCTCAGAGGGTCAGATGGCCGCCTTAGTAGGATGCAGTTCTGCTaGTGCCAAACTGGCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGQVRHRQFLRGSDGRLSRMQFC*CQTGDG Trigger: GCCATCGCCAGTTTGGCAGCAGCAGAACTGCATCCT...ACTAAGGCGGCCATCTGACCCTCTGAGGAATTGTCTGTGCCTTACCTGTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | CCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGTCGCCTTGCAACTCTTaGAAAGCCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNRIWGIVQRQDTPPEHMSPCNS*KACFLC Trigger: GCAGAGGAAGCAGGCTTTCCAAGAGTTGCAAGGCGA...CATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAGCGCCATCGTGTGTGTaGGCCAGGTACACCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRGSDGRLSIYQTCRAAAPSCV*ARYTTA Trigger: AGCAGTGGTGTACCTGGCCCACACACACGATGGCGC...TGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCCGATGCCTCCGAATaGCGCAGCATCTTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: MHRASSCEYERFHLLLWEADASE*RSIFLT Trigger: TGTGAGGAAGATGCTGCGGCATTCGGAGGCATCGGC...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTGGCCAGGTACACCACTaGTTCCCGGATGGCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DGRLSIYQTCRAARTGLCGQVHH*FPDGFN Trigger: ATTGAAGCCATCCGGGAAGCAGTGGTGTACCTGGCC...ACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | AAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGGCCAGGTACACCACTaGTTCCCGGATGGCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDLGYSAEAGHSPRTHEGQVHH*FPDGFN Trigger: ATTGAAGCCATCCGGGAAGCAGTGGTGTACCTGGCC...TTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | TCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCTGGACTGACCAGAGCTCCTTGCCACCAGGATaGAGTTCTGCTGCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPDSSSTLPSMCWTDQSSLPPG*SSAAAK Trigger: TTTGGCAGCAGCAGAACTGCATCCTGGTGGCAAGGA...GCTCTGGTCAGTCCAGCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAATCACTTTCCTGTCCTTaGGTGTGCCGTGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MHRASSCEYERFHLLLWESLSCP*VCRATG Trigger: GCCTGTGGCACGGCACACCCAAGGACAGGAAAGTGA...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTGCTGAGCTGCCTGCTCTaGTTCAGCTCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCEYERFHLLLWEAGSRLLSCLL*FSSFFF Trigger: GAAGAAGAAAGAGCTGAAGCAGAGCAGGCAGCTCAG...CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCATCTAGCTTTGCTGGCTaGAGCTCCAGCACCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRGSDGRLSIYQTCRAASSFAG*SSSTLS Trigger: GGACAAGGTGCTGGAGCTGCAGCCAGCAAAGCTAGA...TGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | GCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAATCCTTGGGTGTGCCGTaGCACAGGCAGTGCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVYIRHAEQQGQASVLKSLGVP*HRQCMA Trigger: GGCCATGCACTGCCTGTGGCACGGCACACCCAAGGA...TTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | TTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAGAAGCTCTCCGTCCTTaGCACCAGGATGCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRGSDGRLSIYQTCRAAEALRP*HQDAVL Trigger: CAGAACTGCATCCTGGTGGCAAGGACGGAGAGCTTC...TGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | TCAAGCGAGGACCCATCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCGAGAGTACTGGCCATTaGCAACCTTCTCCACATACG | + |
|
Preference number: 4 (lower is better) Translates to: SSEDPSSPDSSSTLPSMCESTGH*QPSPHT Trigger: CGTATGTGGAGAAGGTTGCCAATGGCCAGTACTCTC...GCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGATGGGTCCTCGCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCAAAGCTGGAGAGATaGACTCCAAGAGCTCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: MHRASSCEYERFHLLLWEAKLER*TPRAHA Trigger: GGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGC...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTAGTTGGTCTTGTCACTaGGCTGCCTGCTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTSWSCH*AACSAS Trigger: TGAAGCAGAGCAGGCAGCTCAGTGACAAGACCAACT...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | AAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAACTGAGCTGCCTGCTCTaGTTCAGCTCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQDLGYSAEAGHSPRTHELSCLL*FSSFFF Trigger: GAAGAAGAAAGAGCTGAAGCAGAGCAGGCAGCTCAG...TTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCGAGGACCCATCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCTCTGCAAATCACTCATaGGCTTCACCCGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSEDPSSPDSSSTLPSMCSANHS*ASPVFP Trigger: AGGAAAAACGGGTGAAGCTCATGAGTGATTTGCAGA...GCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGATGGGTCCTCGCTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGTCTGCAAATCACTCATaGGCTTCACCCGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKSANHS*ASPVFP Trigger: AGGAAAAACGGGTGAAGCTCATGAGTGATTTGCAGA...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTGTCTGCAAATCACTCATaGGCTTCACCCGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCEYERFHLLLWEAGSRLSANHS*ASPVFP Trigger: AGGAAAAACGGGTGAAGCTCATGAGTGATTTGCAGA...CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAATCCTGTCCTTGGGTGTaGCGTGCCACAGGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQSCPWV*RATGSA Trigger: TGCACTGCCTGTGGCACGGCACACCCAAGGACAGGA...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGCCCACTTGGGTTTCTTaGCTCCTGATTCATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKPTWVS*LLIHHF Trigger: AAAGTGATGAATCAGGAGCCAAGAAACCCAAGTGGG...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGGCAACCTTCTCCACATACGTCTTCATCGTTTTCACGATCACTTTCCTATGCGTACTCCACAATaGCCGATGCCTCCGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: AIGNLLHIRLHRFHDHFPMRTPQ*PMPPNA Trigger: GGCATTCGGAGGCATCGGCCATTGTGGAGTACGCAT...AGGAAAGTGATCGTGAAAACGATGAAGACGTATGTGGAGAAGGTTGCCAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTCTTTCTTCTTCTTTTTaGAGTCATCCCACTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVVSMRDSTFSSGKRVPALSSSF*SHPTWV Trigger: AACCCAAGTGGGATGACTTCAAAAAGAAGAAGAAAG...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAAGCCGATGCCTCCGAATaGCGCAGCATCTTCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQADASE*RSIFLT Trigger: TGTGAGGAAGATGCTGCGGCATTCGGAGGCATCGGC...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCTGGACTGACCAGAGCTCTTGCCAGGTTTTGTaGCACCTTTCTCAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPDSSSTLPSMCWTDQSSCQVL*HLSQSS Trigger: AGAACTTTGAGAAAGGTGCCACAAAACCTGGCAAGA...GCTCTGGTCAGTCCAGCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATTATCTCCGCAACTTGTaGCTTACTTCCATACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKQDLGYSAEAGHSPRTHYLRNL*LTSIHE Trigger: CTCATGTATGGAAGTAAGCCACAAGTTGCGGAGATA...ATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTCACACTATGGGCTCTGACTATTTTAGGGATTGTTCATGGGACAATGTCAGTGCATGGCCACTCTaGCGCCATCGTGTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSHTMGSDYFRDCSWDNVSAWPL*RHRVCG Trigger: CCCACACACACGATGGCGCCAGAGTGGCCATGCACT...GACATTGTCCCATGAACAATCCCTAAAATAGTCAGAGCCCATAGTGTGACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAATCACTTTCCTGTCCTTaGGTGTGCCGTGCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQSLSCP*VCRATG Trigger: GCCTGTGGCACGGCACACCCAAGGACAGGAAAGTGA...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | AGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTGTTTATTCTTTCCTTGTaGTGTCTGTGGACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCEYERFHLLLWEAGSRLFILSL*CLWTLS Trigger: GGAAAGAGTCCACAGACATCACAAGGAAAGAATAAA...CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCGTTCCCATACTGAATaGAGCACTGGATCACGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FNKCMHRASSCEYERFHLRSHTE*STGSRA Trigger: CGCGCGTGATCCAGTGCTTCATTCAGTATGGGAACG...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTGCATCCATAGCAGGCTaGACATCTCCAGTAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VYIRHAEQQGQASVLKTPASIAG*TSPVAD Trigger: ATCTGCTACTGGAGATGTTCAGCCTGCTATGGATGC...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTGGCTTGTTCTTGAACTaGTTCACACCTTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTGLFLN*FTPFLP Trigger: TGGCAAGAAAGGTGTGAAGCAGTTCAAGAACAAGCC...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | GCAGATCTCTGTGAGTTTGAGGCCAGTTTGGTCTACACAATAAATTTCAAAACATCCTGTCCTTGGGTGTaGCGTGCCACAGGCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADLCEFEASLVYTINFKTSCPWV*RATGSA Trigger: TGCACTGCCTGTGGCACGGCACACCCAAGGACAGGA...TGTTTTGAAATTTATTGTGTAGACCAAACTGGCCTCAAACTCACAGAGATCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | GAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCTCTACAAGGGTTTTTaGAAAACAACCTTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERPVVSMRDSTFSSGKRVLYKGF*KTTFLS Trigger: GGAAAGGAAGGTTGTTTTGCAAAAACCCTTGTAGAG...AACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | GATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTTCCTCTGTTCCAAAATaGCTTTGTCGTTGTATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DGRLSIYQTCRAARTGLCSSVPK*LCRCMR Trigger: ACGCATACAACGACAAAGCCATTTTGGAACAGAGGA...ACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CCA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTGCATGGCCACTCTaGCGCCATCGTGTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVTIICNVQISQQAPTRLSAWPL*RHRVCG Trigger: CCCACACACACGATGGCGCCAGAGTGGCCATGCACT...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTTTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTGCCACAGGCAGTGCATaGCCACTCTGGCGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLQAAQKHLSSYVRVFATGSA*PLWRHR Trigger: ACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGC...AAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAAAAAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CCA 90 bp | GCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAATTCTCAAGCAGGGTCTaGATGCCTCTGCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVYIRHAEQQGQASVLKFSSRV*MPLLLL Trigger: AAGCAGCAGCAGAGGCATCCAGACCCTGCTTGAGAA...TTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR TCA 90 bp | TCTTGCTCTAGTAACCATTTGAGAACCAGATGTCCTGCAGGATGCTCAGCAACAGGGTTTCTTGGCTCCTaGTTCATCACTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCSSNHLRTRCPAGCSATGFLGS*FITFTI Trigger: GATGGTGAAAGTGATGAATCAGGAGCCAAGAAACCC...TGTTGCTGAGCATCCTGCAGGACATCTGGTTCTCAAATGGTTACTAGAGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | AAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCGGCTTGTTCTTGAACTaGTTCACACCTTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCMHRASSCEYERFHLLLGLFLN*FTPFLP Trigger: TGGCAAGAAAGGTGTGAAGCAGTTCAAGAACAAGCC...GAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR CCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAATCTTGCCAGGTTTTGTaGCACCTTTCTCAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MHRASSCEYERFHLLLWESCQVL*HLSQSS Trigger: AGAACTTTGAGAAAGGTGCCACAAAACCTGGCAAGA...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR CCA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAATATCTCCGCAACTTGTaGCTTACTTCCATACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: MHRASSCEYERFHLLLWEYLRNL*LTSIHE Trigger: CTCATGTATGGAAGTAAGCCACAAGTTGCGGAGATA...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR TCA 90 bp | AAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAAATTTATTTGCCTTCTaGAATTTGTCCTTCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQDLGYSAEAGHSPRTHENLFAF*NLSFGP Trigger: AGGACCGAAGGACAAATTTCAGAAGGCAAATAAATT...TTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR TCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTTACTTTATGAACGAGTaGGTGCTTAATCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTYFMNE*VLNHSF Trigger: GAAGCTGTGATTAAGCACTCACTCGTTCATAAAGTA...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR TCA 90 bp | GCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAGCTCTAGTAACCATTTaGGAACCAGATGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALVYIRHAEQQGQASVLKALVTI*EPDVLQ Trigger: CTGCAGGACATCTGGTTCTCAAATGGTTACTAGAGC...TTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR GCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTGAGCTGCCTGCTCTaGTTCAGCTCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FNKCMHRASSCEYERFHLLSCLL*FSSFFF Trigger: GAAGAAGAAAGAGCTGAAGCAGAGCAGGCAGCTCAG...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCTCTAGCTTTGCTGGCTaGAGCTCCAGCACCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVTIICNVQISQQAPTRLSSFAG*SSSTLS Trigger: GGACAAGGTGCTGGAGCTGCAGCCAGCAAAGCTAGA...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | GAATTAGAACTACAGAGGAAACAGCTGCTTTTTCTACAAGCTGCACAAAAGCACATGCAGTTCTGCTGCTaGCAAACTGGCGATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ELELQRKQLLFLQAAQKHMQFCC*QTGDGI Trigger: GATGCCATCGCCAGTTTGGCAGCAGCAGAACTGCAT...GTGCTTTTGTGCAGCTTGTAGAAAAAGCAGCTGTTTCCTCTGTAGTTCTAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | GCAGATCTCTGTGAGTTTGAGGCCAGTTTGGTCTACACAATAAATTTCAAAACAATGCGTACTCCACAATaGCCGATGCCTCCGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLCEFEASLVYTINFKTMRTPQ*PMPPNA Trigger: GGCATTCGGAGGCATCGGCCATTGTGGAGTACGCAT...TGTTTTGAAATTTATTGTGTAGACCAAACTGGCCTCAAACTCACAGAGATCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTATTTCCGCTTCTTGCTaGATTTATTTGCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTISASC*IYLPSE Trigger: TTCAGAAGGCAAATAAATTCAGCAAGAAGCGGAAAT...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAAGGGTTTCTTGGCTCCTaGTTCATCACTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQGFLGS*FITFTI Trigger: GATGGTGAAAGTGATGAATCAGGAGCCAAGAAACCC...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR GCA 90 bp | TTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTGCTTCACACCTTTCTTaGCAGGTTTTGTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNKCMHRASSCEYERFHLASHLS*QVLWHL Trigger: AAGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGC...AAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAAGCTTCACACCTTTCTTaGCAGGTTTTGTGGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQASHLS*QVLWHL Trigger: AAGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGC...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAACCCACTTGGGTTTCTTaGCTCCTGATTCATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALVYIRHAEQQGQASVLKPTWVS*LLIHHF Trigger: AAAGTGATGAATCAGGAGCCAAGAAACCCAAGTGGG...TTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATACTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | GCCATTGGCAACCTTCTCCACATACGTCTTCATCGTTTTCACGATCACTTTCCTTCCTCTGTTCCAAAATaGCTTTGTCGTTGTATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AIGNLLHIRLHRFHDHFPSSVPK*LCRCMR Trigger: ACGCATACAACGACAAAGCCATTTTGGAACAGAGGA...AGGAAAGTGATCGTGAAAACGATGAAGACGTATGTGGAGAAGGTTGCCAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGTCACACTATGGGCTCTGACTATTTTAGGGATTGTTCATGGGACAATGTCGGGTTTCTTGGCTCCTaGTTCATCACTTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: FSHTMGSDYFRDCSWDNVGFLGS*FITFTI Trigger: GATGGTGAAAGTGATGAATCAGGAGCCAAGAAACCC...GACATTGTCCCATGAACAATCCCTAAAATAGTCAGAGCCCATAGTGTGACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTCTTTCTTCTTCTTTTTaGAGTCATCCCACTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VYIRHAEQQGQASVLKTPLSSSF*SHPTWV Trigger: AACCCAAGTGGGATGACTTCAAAAAGAAGAAGAAAG...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR GCA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAACTCTTGGAAAGCCTaGTTCCTCTGCTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVTIICNVQISQQAPTRLNSWKA*FLCSSF Trigger: GAACGAGGAGCAGAGGAAGCAGGCTTTCCAAGAGTT...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTGGTGGTAACAAAAACCAGTATCCTGTTTCTGAGCTATAATCTCCTATTAATGCGTACTCCACAATaGCCGATGCCTCCGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVTKTSILFLSYNLLLMRTPQ*PMPPNA Trigger: GGCATTCGGAGGCATCGGCCATTGTGGAGTACGCAT...TAATAGGAGATTATAGCTCAGAAACAGGATACTGGTTTTTGTTACCACCAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| 3UTR CAA 72 bp | TTAGGGATTGTTCATGGGACAATGTCCTCATTCTCCTaGGAAGGTATTTACCCTGAAGGCCCAAATACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGIVHGTMSSFS*EGIYPEGPNTK Trigger: CTTTGTATTTGGGCCTTCAGGGTAAATACCTTCCAAGGAGAATGAGGACATTGTCCCATGAACAATCCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR CAA 72 bp | GCTACACAAGTTCTCATGGTCTACAGATCTCCAGTTTaGCCGCTGAAAGCCAGCTGTATTTTTAAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATQVLMVYRSPV*PLKASCIFKVQ Trigger: TTGGACTTTAAAAATACAGCTGGCTTTCAGCGGCAAAACTGGAGATCTGTAGACCATGAGAACTTGTGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| 3UTR CAA 72 bp | GGGCTCATCAAGTACAAGAGGACTTTCCTTCCGTATTaGTCATTAACTATGCTGGGCAAGGAACTGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: GLIKYKRTFLPY*SLTMLGKELMI Trigger: AATCATCAGTTCCTTGCCCAGCATAGTTAATGACAAATACGGAAGGAAAGTCCTCTTGTACTTGATGAGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCCTTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCTTTATTCTTTCCTTGTaGTGTCTGTGGACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSFNKCMHRASSCEYERFFILSL*CLWTLS Trigger: GGAAAGAGTCCACAGACATCACAAGGAAAGAATAAA...GAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCCTTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCTACTTTATGAACGAGTaGGTGCTTAATCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSFNKCMHRASSCEYERFYFMNE*VLNHSF Trigger: GAAGCTGTGATTAAGCACTCACTCGTTCATAAAGTA...GAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTTCCAAGAATACTTTATaGACGAGTGAGTGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VYIRHAEQQGQASVLKTPSKNTL*TSECLI Trigger: GATTAAGCACTCACTCGTTCATAAAGTATTCTTGGA...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTGGAACTGATGATTTCTaGTATGATTATCTGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYIRHAEQQGQASVLKTPGTDDF*YDYLLH Trigger: GTGAAGCAGATAATCATATCAGAAATCATCAGTTCC...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | TTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTCACTTTTTCGCCTTGCAACTCTTaGAAAGCCTGCTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYKLHKSTFQVMYVFFTFSPCNS*KACFLC Trigger: GCAGAGGAAGCAGGCTTTCCAAGAGTTGCAAGGCGA...AAAAGTGAAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAATCCTCTGTTCCAAAATaGCTTTGTCGTTGTATGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQSSVPK*LCRCMR Trigger: ACGCATACAACGACAAAGCCATTTTGGAACAGAGGA...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTACACAATAAATTTCAAAACAGTCAGAGCTACATAGCAAGATCCTGCGTAGCTCAGCAAAGCTaGAGAGATGGACTCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLHNKFQNSQSYIARSCVAQQS*RDGLQE Trigger: CTCTTGGAGTCCATCTCTCCAGCTTTGCTGAGCTAC...GCAGGATCTTGCTATGTAGCTCTGACTGTTTTGAAATTTATTGTGTAGACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAACTTTCTTCTTCTTTTTaGAGTCATCCCACTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ICNVQISQQAPTRLSSHQLSSSF*SHPTWV Trigger: AACCCAAGTGGGATGACTTCAAAAAGAAGAAGAAAG...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCCTTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCGTTTCAGTCCACCTTTaGCTTTGTTTACAACTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSFNKCMHRASSCEYERFVSVHL*LCLQLL Trigger: AAGAAGTTGTAAACAAAGTCAAAGGTGGACTGAAAC...GAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CCA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCTCTTGCCAGGTTTTGTaGCACCTTTCTCAAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVTIICNVQISQQAPTRLSCQVL*HLSQSS Trigger: AGAACTTTGAGAAAGGTGCCACAAAACCTGGCAAGA...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CCA 90 bp | TTTGGTCTACACAATAAATTTCAAAACAGTCAGAGCTACATAGCAAGATCCTGCTATCTCCGCAACTTGTaGCTTACTTCCATACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGLHNKFQNSQSYIARSCYLRNL*LTSIHE Trigger: CTCATGTATGGAAGTAAGCCACAAGTTGCGGAGATA...GCAGGATCTTGCTATGTAGCTCTGACTGTTTTGAAATTTATTGTGTAGACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTTTTGGTGGTAACAAAAACCAGTATCCTGTTTCTGAGCTATAATCTCCTATTATTTATTCTTTCCTTGTaGTGTCTGTGGACTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVTKTSILFLSYNLLLFILSL*CLWTLS Trigger: GGAAAGAGTCCACAGACATCACAAGGAAAGAATAAA...TAATAGGAGATTATAGCTCAGAAACAGGATACTGGTTTTTGTTACCACCAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCTACACAATAAATTTCAAAACAGTCAGAGCTACATAGCAAGATCCTGCAATTTATTTGCCTTCTaGAATTTGTCCTTCGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGLHNKFQNSQSYIARSCNLFAF*NLSFGP Trigger: AGGACCGAAGGACAAATTTCAGAAGGCAAATAAATT...GCAGGATCTTGCTATGTAGCTCTGACTGTTTTGAAATTTATTGTGTAGACCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | TTTGGTCTACACAATAAATTTCAAAACAGTCAGAGCTACATAGCAAGATCCTGCATTTCCGCTTCTTGCTaGATTTATTTGCCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FGLHNKFQNSQSYIARSCISASC*IYLPSE Trigger: TTCAGAAGGCAAATAAATTCAGCAAGAAGCGGAAAT...GCAGGATCTTGCTATGTAGCTCTGACTGTTTTGAAATTTATTGTGTAGACCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR TCA 90 bp | GTTTTGGTGGTAACAAAAACCAGTATCCTGTTTCTGAGCTATAATCTCCTATTATCCAAGAATACTTTATaGACGAGTGAGTGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVTKTSILFLSYNLLLSKNTL*TSECLI Trigger: GATTAAGCACTCACTCGTTCATAAAGTATTCTTGGA...TAATAGGAGATTATAGCTCAGAAACAGGATACTGGTTTTTGTTACCACCAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS TCA 90 bp | CCTTCTTGCTGTGCGCGTTGCCATCACCCTTCTGCAGAAGCTCGATaGGCTCGGGCACCGTGTGGGCGGGGTCTCTGGGGCTCATCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSCCARCHHPSAEAR*ARAPCGRGLWGSSS Trigger: ACTTGATGAGCCCCAGAGACCCCGCCCACACGGTGCCCGAGCTCATCGAGCTTCTGCAGAAGGGTGATGGCAACGCGCACAGCAAGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | GTGCAGGCTGCCCTGGCCACAGGCTTCCCGGAGTTCAGACCACTTTCCTGCTCCATCACTTTCCTGTCCTaGGGTGTGCCGTGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VQAALATGFPEFRPLSCSITFLS*GVPCHR Trigger: CCTGTGGCACGGCACACCCAAGGACAGGAAAGTGAT...GGAGCAGGAAAGTGGTCTGAACTCCGGGAAGCCTGTGGCCAGGGCAGCCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CAA 90 bp | GTGCCGTGCCACAGGCAGTGCATGGCCACTCTGGCGCCATCGTGTGTGTGGGCCTTCAACCAAGTCGCCTaGCAACTCTTGGAAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPCHRQCMATLAPSCVWAFNQVA*QLLESL Trigger: CAGGCTTTCCAAGAGTTGCAAGGCGACTTGGTTGAA...GGCCCACACACACGATGGCGCCAGAGTGGCCATGCACTGCCTGTGGCACGGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| CDS GCA 90 bp | CAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTaGAGTGTCCTTCTTGCTGTGCGCGTTGCCATCACCCTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQSWRDGLQELTPAD*SVLLAVRVAITLLQ Trigger: CTGCAGAAGGGTGATGGCAACGCGCACAGCAAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | CCCCACTCTCCTCCTCACTCCATGCCTAGAGGATCCAGCCAACAGTGGCAGGTGTGCTTCACACCTTTCTaGCCAGGTTTTGTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PHSPPHSMPRGSSQQWQVCFTPF*PGFVAP Trigger: AGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGCA...CACCTGCCACTGTTGGCTGGATCCTCTAGGCATGGAGTGAGGAGGAGAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | CCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGGCACCTTGTCCAGCGTaGGGTGATCTGCTGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PNRIWGIVQRQDTPPEHMAPCPA*GDLLTC Trigger: ACAAGTCAGCAGATCACCCAACGCTGGACAAGGTGC...CATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGATCACTTTCCTGTCCTaGGGTGTGCCGTGCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKITFLS*GVPCHR Trigger: CCTGTGGCACGGCACACCCAAGGACAGGAAAGTGAT...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGCGGTCCTTTGCCCCCTaGTGGCTTGTTCTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKRSFAP*WLVLEL Trigger: CAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCG...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | AGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTGTTGTCCTTCGGTCCTTaGCCCCCTTGTGGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCEYERFHLLLWEAGSRLLSFGP*PPCGLF Trigger: GAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAA...CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | AAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAATTGTCCTTCGGTCCTTaGCCCCCTTGTGGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQDLGYSAEAGHSPRTHELSFGP*PPCGLF Trigger: GAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAA...TTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTTCAACCAAGTCGCCTaGCAACTCTTGGAAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVVSMRDSTFSSGKRVPAFNQVA*QLLESL Trigger: CAGGCTTTCCAAGAGTTGCAAGGCGACTTGGTTGAA...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | AGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTTGCTCTTGAGTGTGTCCTaGCAGGTAGCTCAGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCEYERFHLLLWEAGSRLLLSVS*QVAQQS Trigger: GCTTTGCTGAGCTACCTGCAAGGACACACTCAAGAG...CAAGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | TCAAGCGAGGACCCATCATCTCCTGATTCCTCTAGCACACTTCCCTCCATGTGCATCCAGCACCACCTCTaGAGTGTGTCCTTGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSEDPSSPDSSSTLPSMCIQHHL*SVSLQV Trigger: TACCTGCAAGGACACACTCAAGAGGTGGTGCTGGAT...GCACATGGAGGGAAGTGTGCTAGAGGAATCAGGAGATGATGGGTCCTCGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | AACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAAGTGCTTCACACCTTTCTaGCCAGGTTTTGTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: NRIWGIVQRQDTPPEHMKCFTPF*PGFVAP Trigger: AGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGCA...CTTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | TTCCTCAGAGGGTCAGATGGCCGCCTTAGTATATATCAGACATGCAGAGCAGCACGGTCCTTTGCCCCCTaGTGGCTTGTTCTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRGSDGRLSIYQTCRAARSFAP*WLVLEL Trigger: CAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCG...TGCTGCTCTGCATGTCTGATATATACTAAGGCGGCCATCTGACCCTCTGAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | GGAGAACCAAGTGAGAGTACTGGCCATTGGCAACCTTCTCCACATACGTCTTCACGGTCCTTTGCCCCCTaGTGGCTTGTTCTTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GEPSESTGHWQPSPHTSSRSFAP*WLVLEL Trigger: CAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCG...TGAAGACGTATGTGGAGAAGGTTGCCAATGGCCAGTACTCTCACTTGGTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR CAA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAATTGTCCTTCGGTCCTTaGCCCCCTTGTGGCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MHRASSCEYERFHLLLWELSFGP*PPCGLF Trigger: GAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAA...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATTGCAGTGGATTATCTCCGCAACTaGTGGCTTACTTCCATACAT | + |
|
Preference number: 5 (lower is better) Translates to: LSKAGEMDSKSSRRRIAVDYLRN*WLTSIH Trigger: ATGTATGGAAGTAAGCCACAAGTTGCGGAGATAATC...CACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR CAA 90 bp | CGTGTGGGCGGGGTCTCTGGGGCTCATCAAGTACAAGAGGACTTTCCTTCCGTATGTTCCAAAATGGCTTaGTCGTTGTATGCGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGGVSGAHQVQEDFPSVCSKMA*SLYAYS Trigger: GGAGTACGCATACAACGACAAAGCCATTTTGGAACA...TACGGAAGGAAAGTCCTCTTGTACTTGATGAGCCCCAGAGACCCCGCCCACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR CAA 90 bp | AAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATGAATTGCCCCCTTGTGGCTaGTTCTTGAACTGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KQDLGYSAEAGHSPRTHELPPCG*FLNCFT Trigger: TGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAA...TTCATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS-3UTR CAA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTGCACCTTGTCCAGCGTaGGGTGATCTGCTGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VYIRHAEQQGQASVLKTPAPCPA*GDLLTC Trigger: ACAAGTCAGCAGATCACCCAACGCTGGACAAGGTGC...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CAA 90 bp | CCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGCGGGTTCCCGCTGCTCTACAAGGGTTTTaGCAAAACAACCTTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVVSMRDSTFSSGKRVPAALQGF*QNNLPF Trigger: GAAAGGAAGGTTGTTTTGCAAAAACCCTTGTAGAGC...AGCGGGAACCCGCTTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
||
| CDS-3UTR CAA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCTTGTGGCTTGTTCTaGAACTGCTTCACACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTPCGLF*NCFTPF Trigger: GAAAGGTGTGAAGCAGTTCAAGAACAAGCCACAAGG...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
||
| CDS TCA 90 bp | TCTGAAATTTGTCCTTCGGTCCTTTGCCCCCTTGTGGCTTGTTCTTaGACTGCTTCACACCTTTCTTGCCAGGTTTTGTGGCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEICPSVLCPLVACS*TASHLSCQVLWHLS Trigger: AGAAAGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAAATTTCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 ENSMUST00000236702.2 |
||
| CDS GCA 90 bp | AATTTGTCCTTCGGTCCTTTGCCCCCTTGTGGCTTGTTCTTGAACTaGTTCACACCTTTCTTGCCAGGTTTTGTGGCACCTTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NLSFGPLPPCGLFLN*FTPFLPGFVAPFSK Trigger: CTTTGAGAAAGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 ENSMUST00000236702.2 |
||
| CDS-3UTR CAA 90 bp | GCCATTGGCAACCTTCTCCACATACGTCTTCATCGTTTTCACGATCACTTTCCTTGCTTCACACCTTTCTaGCCAGGTTTTGTGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AIGNLLHIRLHRFHDHFPCFTPF*PGFVAP Trigger: AGGTGCCACAAAACCTGGCAAGAAAGGTGTGAAGCA...AGGAAAGTGATCGTGAAAACGATGAAGACGTATGTGGAGAAGGTTGCCAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
||
| CDS-3UTR CAA 90 bp | ACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTCCCCCAGAACACATTTCACCCGTTTTTCCTaGTCACAATCTTTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TKQDLGYSAEAGHSPRTHFTRFS*SQSFLL Trigger: GAGAAGAAAAGATTGTGACAAGGAAAAACGGGTGAA...ATGTGTTCTGGGGGAGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | CTTGACACATCACAACCAAACAGGATCTGGGGTATAGTGCAGAGGCAGGACACTTGTTCCAAAATGGCTTaGTCGTTGTATGCGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: LDTSQPNRIWGIVQRQDTCSKMA*SLYAYS Trigger: GGAGTACGCATACAACGACAAAGCCATTTTGGAACA...AGTGTCCTGCCTCTGCACTATACCCCAGATCCTGTTTGGTTGTGATGTGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | CTCATCAAGTACAAGAGGACTTTCCTTCCGTATTTGTCATTAACTATGCTGGGCTTGCCCCCTTGTGGCTaGTTCTTGAACTGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: LIKYKRTFLPYLSLTMLGLPPCG*FLNCFT Trigger: TGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAA...GCCCAGCATAGTTAATGACAAATACGGAAGGAAAGTCCTCTTGTACTTGATGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | ATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCCACCTTCTCCTCTGGGAAGGTTTCAGTCCACCTTaGACTTTGTTTACAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: MHRASSCEYERFHLLLWEGFSPP*TLFTTS Trigger: AGAAGTTGTAAACAAAGTCAAAGGTGGACTGAAACC...TTCCCAGAGGAGAAGGTGGAATCTCTCATACTCACAACTGGACGCTCTGTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | TTTAGTCACACTATGGGCTCTGACTATTTTAGGGATTGTTCATGGGACAATGTCTTGCCCCCTTGTGGCTaGTTCTTGAACTGCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: FSHTMGSDYFRDCSWDNVLPPCG*FLNCFT Trigger: TGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAA...GACATTGTCCCATGAACAATCCCTAAAATAGTCAGAGCCCATAGTGTGACTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | GTATATATCAGACATGCAGAGCAGCAAGGACAGGCCTCTGTACTAAAAACGCCTGATTATCTCCGCAACTaGTGGCTTACTTCCATACAT | + |
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Preference number: 5 (lower is better) Translates to: VYIRHAEQQGQASVLKTPDYLRN*WLTSIH Trigger: ATGTATGGAAGTAAGCCACAAGTTGCGGAGATAATC...AGGCGTTTTTAGTACAGAGGCCTGTCCTTGCTGCTCTGCATGTCTGATATATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | TTGGTCACAACTCTGAAGAAGGCTGGAAAGAATAATGGCACCTCGGTTGATGCTAAAATGGCTTTGTCGTaGTATGCGTACTCCACAATG | + |
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Preference number: 5 (lower is better) Translates to: LVTTLKKAGKNNGTSVDAKMALS*YAYSTM Trigger: CATTGTGGAGTACGCATACAACGACAAAGCCATTTT...AGCATCAACCGAGGTGCCATTATTCTTTCCAGCCTTCTTCAGAGTTGTGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | TTTAGTCACACTATGGGCTCTGACTATTTTAGGGATTGTTCATGGGACAATGTCCCTTGTGGCTTGTTCTaGAACTGCTTCACACCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FSHTMGSDYFRDCSWDNVPCGLF*NCFTPF Trigger: GAAAGGTGTGAAGCAGTTCAAGAACAAGCCACAAGG...GACATTGTCCCATGAACAATCCCTAAAATAGTCAGAGCCCATAGTGTGACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCTTCAACCAAGTCGCCTaGCAACTCTTGGAAAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: NVTIICNVQISQQAPTRLFNQVA*QLLESL Trigger: CAGGCTTTCCAAGAGTTGCAAGGCGACTTGGTTGAA...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAATTAAGAAACGTGCTCTaGCTGCACTCACATTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: ICNVQISQQAPTRLSSHQLRNVL*LHSHWQ Trigger: TTGCCAATGTGAGTGCAGCAAGAGCACGTTTCTTAA...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | AGGTCCTTTAACAAATGCATGCACAGAGCGTCCAGTTGTGAGTATGAGAGATTCTTCACCCGTTTTTCCTaGTCACAATCTTTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RSFNKCMHRASSCEYERFFTRFS*SQSFLL Trigger: GAGAAGAAAAGATTGTGACAAGGAAAAACGGGTGAA...GAATCTCTCATACTCACAACTGGACGCTCTGTGCATGCATTTGTTAAAGGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076219.6 ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | ATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAGTTCACATCAAAAAATGGCTTTGTCGTaGTATGCGTACTCCACAATG | + |
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Preference number: 5 (lower is better) Translates to: ICNVQISQQAPTRLSSHQKMALS*YAYSTM Trigger: CATTGTGGAGTACGCATACAACGACAAAGCCATTTT...TTGATGTGAACTGAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | AATGTAACAATTATCTGTAATGTTCAAATTTCCCAGCAGGCACCAACTCGTCTCAATCACAGCTTCCTTTaGGGCCATCGGTGTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: NVTIICNVQISQQAPTRLNHSFL*GHRCQN Trigger: ATTCTGACACCGATGGCCCAAAAGGAAGCTGTGATT...GAGACGAGTTGGTGCCTGCTGGGAAATTTGAACATTACAGATAATTGTTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCTCATCAAGTACAAGAGGACTTTCCTTCCGTATTTGTCATTAACTATGTTCACCCGTTTTTCCTaGTCACAATCTTTTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LGLIKYKRTFLPYLSLTMFTRFS*SQSFLL Trigger: GAGAAGAAAAGATTGTGACAAGGAAAAACGGGTGAA...CATAGTTAATGACAAATACGGAAGGAAAGTCCTCTTGTACTTGATGAGCCCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235859.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTTGTTCCAAAATGGCTTaGTCGTTGTATGCGTACTCC | + |
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Preference number: 5 (lower is better) Translates to: LLFLQAAQKHLSSYVRVFCSKMA*SLYAYS Trigger: GGAGTACGCATACAACGACAAAGCCATTTTGGAACA...AAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAAAAAGCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | TTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTCACTTTTAATCACAGCTTCCTTTaGGGCCATCGGTGTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: FYKLHKSTFQVMYVFFTFNHSFL*GHRCQN Trigger: ATTCTGACACCGATGGCCCAAAAGGAAGCTGTGATT...AAAAGTGAAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTTGCTCTAGTAACCATTaGAGAACCAGATGTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLFLQAAQKHLSSYVRVFCSSNH*RTRCPA Trigger: TGCAGGACATCTGGTTCTCAAATGGTTACTAGAGCA...AAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAAAAAGCAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS-3UTR CAA 90 bp | GTTTTGGTGGTAACAAAAACCAGTATCCTGTTTCTGAGCTATAATCTCCTATTAGATTATCTCCGCAACTaGTGGCTTACTTCCATACAT | + |
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Preference number: 5 (lower is better) Translates to: VLVVTKTSILFLSYNLLLDYLRN*WLTSIH Trigger: ATGTATGGAAGTAAGCCACAAGTTGCGGAGATAATC...TAATAGGAGATTATAGCTCAGAAACAGGATACTGGTTTTTGTTACCACCAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235297.2 |
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| CDS-3UTR CAA 90 bp | TTCTACAAGCTGCACAAAAGCACCTTTCAAGTTATGTACGTGTTTTTCACTTTTAAAATGGCTTTGTCGTaGTATGCGTACTCCACAATG | + |
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Preference number: 5 (lower is better) Translates to: FYKLHKSTFQVMYVFFTFKMALS*YAYSTM Trigger: CATTGTGGAGTACGCATACAACGACAAAGCCATTTT...AAAAGTGAAAAACACGTACATAACTTGAAAGGTGCTTTTGTGCAGCTTGTAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS CAA 72 bp | CTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATaGCAGTGTCCTTCTTGCTGTGCGCGTTGCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: LERWTPRAHAGG*QCPSCCARCHH Trigger: GTGATGGCAACGCGCACAGCAAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS CAA 90 bp | TCAGCAAAGCTGGAGAGATGGACTCCAAGAGCTCACGCCGGCGGATaGCAGTGTCCTTCTTGCTGTGCGCGTTGCCATCACCCTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SAKLERWTPRAHAGG*QCPSCCARCHHPSA Trigger: TGCAGAAGGGTGATGGCAACGCGCACAGCAAGAAGGACACTGCAATCCGCCGGCGTGAGCTCTTGGAGTCCATCTCTCCAGCTTTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076219.6 |
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| CDS CAA 72 bp | TTGTCCTTCGGTCCTTTGCCCCCTTGTGGCTTGTTCTaGAACTGCTTCACACCTTTCTTGCCAGGTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LSFGPLPPCGLF*NCFTPFLPGFV Trigger: CACAAAACCTGGCAAGAAAGGTGTGAAGCAGTTCAAGAACAAGCCACAAGGGGGCAAAGGACCGAAGGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 ENSMUST00000236702.2 |
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| CDS TCA 72 bp | TTGCTCGAACCACGATGTCATAGTTGGTCTTGTCACTaGGCTGCCTGCTCTGCTTCAGCTCTTTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLEPRCHSWSCH*AACSASALSSS Trigger: AGAAGAAGAAAGAGCTGAAGCAGAGCAGGCAGCTCAGTGACAAGACCAACTATGACATCGTGGTTCGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 |
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| CDS CCA 72 bp | GCTTTACTTAATTCAACCAAGTCGCCTTGCAACTCTTaGAAAGCCTGCTTCCTCTGCTCCTCGTTCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: ALLNSTKSPCNS*KACFLCSSFPY Trigger: GTATGGGAACGAGGAGCAGAGGAAGCAGGCTTTCCAAGAGTTGCAAGGCGACTTGGTTGAATTAAGTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 |
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| CDS TCA 72 bp | TCCGCCTTCCTTAACAGCTTTCCTTGGGAATGTCTTTaGAGAACTAGACTCACTGTTCTTATGAAATTTATT | + |
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Preference number: 6 (lower is better) Translates to: SAFLNSFPWECL*RTRLTVLMKFI Trigger: AATAAATTTCATAAGAACAGTGAGTCTAGTTCTTCAAAGACATTCCCAAGGAAAGCTGTTAAGGAAGGCGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076219.6 ENSMUST00000235297.2 ENSMUST00000235859.2 ENSMUST00000236702.2 |
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