RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PUM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028580

Ensembl transcript IDs: ENSMUST00000030315.13, ENSMUST00000097862.3, ENSMUST00000097864.9, ENSMUST00000105991.9, ENSMUST00000105992.9, ENSMUST00000143277.8

Found 834 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACTGGCCTTaGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTGCAGCTACCACC +
Preference number: 1 (lower is better)
Translates to: SHRQPQAASGHAHWP*ASGVPAPPGSAATT
Trigger: GGTGGTAGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 90 bp TGGCCATGCCCACTGGCCTTGGGCCTCTGGGGTCCCCGCTCCTCCTaGATCTGCAGCTACCACCTCCCTCAGCACGAGGTCATCTCCAAA +
Preference number: 1 (lower is better)
Translates to: WPCPLALGLWGPRSS*ICSYHLPQHEVISK
Trigger: TTTGGAGATGACCTCGTGCTGAGGGAGGTGGTAGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 90 bp CAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACTaGCCTTGGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: QCSHRQPQAASGHAH*PWASGVPAPPGSAA
Trigger: AGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 90 bp ACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCCGAGCTaGGTATTCTCTCATGCTAAACAGTCAGATCCTGCTTCCCAGTGT +
Preference number: 1 (lower is better)
Translates to: TSIHYVSIEARPGPS*VFSHAKQSDPASQC
Trigger: ACACTGGGAAGCAGGATCTGACTGTTTAGCATGAGAGAATACCCAGCTCGGCCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR TCA 90 bp TGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTaGTTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACTCCT +
Preference number: 1 (lower is better)
Translates to: CYDHKRWDIQSARAG*FSSYQKRVRVDQTP
Trigger: AGGAGTTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR TCA 90 bp TGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTaGTCAAACTCCTCCACATTTACATTACAGGTATACAAATGTACA +
Preference number: 1 (lower is better)
Translates to: CTGWLILFLPKTCSC*SNSSTFTLQVYKCT
Trigger: TGTACATTTGTATACCTGTAATGTAAATGTGGAGGAGTTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 90 bp AAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTaGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACA +
Preference number: 1 (lower is better)
Translates to: KCPHVEYRYNIEQSM*PPMYTDYLCTSSYT
Trigger: TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CAA 90 bp TTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACTGGCCTaGGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTGCAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: FTQATTGSKWPCPLA*GLWGPRSSWICSYH
Trigger: GTGGTAGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACATGCCCACTGGCCTTaGGCCTCTGGGGTCCCCGCT +
Preference number: 2 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKHAHWP*ASGVPA
Trigger: AGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTACGACCATAAAAGGTaGGATATACAGAGTGCACGG +
Preference number: 2 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTYDHKR*DIQSAR
Trigger: CCGTGCACTCTGTATATCCCACCTTTTATGGTCGTA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR TCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCATCTGCCAGGGTCAGTaGGGTCAGCGGGACAGGGAC +
Preference number: 2 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLICQGQ*GQRDRD
Trigger: GTCCCTGTCCCGCTGACCTCACTGACCCTGGCAGAT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR TCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAATCTGCCAGGGTCAGTaGGGTCAGCGGGACAGGGAC +
Preference number: 2 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTICQGQ*GQRDRD
Trigger: GTCCCTGTCCCGCTGACCTCACTGACCCTGGCAGAT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR TCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCCTCCCATGTACACTaGTTACCTATGTACAAGTTC +
Preference number: 2 (lower is better)
Translates to: NTICYDHKRWDIQSARAGASHVH*LPMYKF
Trigger: GAACTTGTACATAGGTAATCAGTGTACATGGGAGGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR TCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTATCTGCCAGGGTCAGTaGGGTCAGCGGGACAGGGAC +
Preference number: 2 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLICQGQ*GQRDRD
Trigger: GTCCCTGTCCCGCTGACCTCACTGACCCTGGCAGAT...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCTATTTGCAAAACTTaGCACAAGGCAAATGAGTTA +
Preference number: 2 (lower is better)
Translates to: NTICYDHKRWDIQSARAGAICKT*HKANEL
Trigger: TAACTCATTTGCCTTGTGGCAAGTTTTGCAAATAGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CAA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTaGATCAAACTCCTCCACATTTACATTACAGGTATACAAATGTAC +
Preference number: 2 (lower is better)
Translates to: VHGLADSLLTKNVFV*IKLLHIYITGIQMY
Trigger: GTACATTTGTATACCTGTAATGTAAATGTGGAGGAGTTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCTATTTGCAAAACTTaGCACAAGGCAAATGAGTTA +
Preference number: 2 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGAICKT*HKANEL
Trigger: TAACTCATTTGCCTTGTGGCAAGTTTTGCAAATAGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGCTATTTGCAAAACTTaGCACAAGGCAAATGAGTTA +
Preference number: 2 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLAICKT*HKANEL
Trigger: TAACTCATTTGCCTTGTGGCAAGTTTTGCAAATAGC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 72 bp GGCAGCAAGTGGCCATGCCCACTGGCCTTGGGCCTCTaGGGTCCCCGCTCCTCCTGGATCTGCAGCTACCAC +
Preference number: 3 (lower is better)
Translates to: GSKWPCPLALGL*GPRSSWICSYH
Trigger: GTGGTAGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 72 bp CACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACTaGCCTTGGGCCTCTGGGGTCCCCGCTCCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: HRQPQAASGHAH*PWASGVPAPPG
Trigger: TCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR GCA 72 bp GCCTTGGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTaGAGCTACCACCTCCCTCAGCACGAGGTCATCTCC +
Preference number: 3 (lower is better)
Translates to: ALGLWGPRSSWI*SYHLPQHEVIS
Trigger: GGAGATGACCTCGTGCTGAGGGAGGTGGTAGCTGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 72 bp CAACCACAGGCAGCAAGTGGCCATGCCCACTGGCCTTaGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTGCA +
Preference number: 3 (lower is better)
Translates to: QPQAASGHAHWP*ASGVPAPPGSA
Trigger: TGCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTCCATGCCCACTGGCCTaGGGCCTCTGGGGTCCCCGC +
Preference number: 3 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTPCPLA*GLWGPR
Trigger: GCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGG...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 72 bp TCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTaGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGT +
Preference number: 3 (lower is better)
Translates to: SRSNRCPLPTLS*APLVAGWICQG
Trigger: ACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR TCA 72 bp AGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTaGGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCC +
Preference number: 3 (lower is better)
Translates to: SNPGATVAHFRR*AGHLWLLVGSA
Trigger: GGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGACCTCTGGTTGCTGGTaGGATCTGCCAGGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELTSGCW*DLPGSV
Trigger: CACTGACCCTGGCAGATCCAACCAGCAACCAGAGGT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCCCATGCCCACTGGCCTaGGGCCTCTGGGGTCCCCGC +
Preference number: 3 (lower is better)
Translates to: NTICYDHKRWDIQSARAGPCPLA*GLWGPR
Trigger: GCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGG...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCTGGGCACCTCTGGTaGCTGGTTGGATCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTAGHLW*LVGSAR
Trigger: CCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACAATATAGATACAACATaGAACAAAGCATGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: PASQCSHRQPQAASGHAHNIDTT*NKACGL
Trigger: GAGGCCACATGCTTTGTTCAATGTTGTATCTATATT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGCTGGGCACCTCTGGTaGCTGGTTGGATCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIAGHLW*LVGSAR
Trigger: CCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CCA 72 bp CACTATGTATCTATAGAAGCCAGACCAGGGCCGAGCTaGGTATTCTCTCATGCTAAACAGTCAGATCCTGCT +
Preference number: 3 (lower is better)
Translates to: HYVSIEARPGPS*VFSHAKQSDPA
Trigger: AGCAGGATCTGACTGTTTAGCATGAGAGAATACCCAGCTCGGCCCTGGTCTGGCTTCTATAGATACATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCACCTCTGGTTGCTGGTaGGATCTGCCAGGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLTSGCW*DLPGSV
Trigger: CACTGACCCTGGCAGATCCAACCAGCAACCAGAGGT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTACCTCTGGTTGCTGGTaGGATCTGCCAGGGTCAGTG +
Preference number: 3 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAITSGCW*DLPGSV
Trigger: CACTGACCCTGGCAGATCCAACCAGCAACCAGAGGT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR TCA 72 bp CATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTaGTTCTCTTCTTACCAAAAACGTGTTCGTGTTGAT +
Preference number: 3 (lower is better)
Translates to: HKRWDIQSARAG*FSSYQKRVRVD
Trigger: ATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCACTCTGTATATCCCACCTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR TCA 72 bp TGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTaGTCAAACTCCTCCACATTTACATTACAGGTATAC +
Preference number: 3 (lower is better)
Translates to: WLILFLPKTCSC*SNSSTFTLQVY
Trigger: GTATACCTGTAATGTAAATGTGGAGGAGTTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
3UTR CAA 72 bp GCAACCACAGGCAGCAAGTGGCCATGCCCACTGGCCTaGGGCCTCTGGGGTCCCCGCTCCTCCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: ATTGSKWPCPLA*GLWGPRSSWIC
Trigger: GCAGATCCAGGAGGAGCGGGGACCCCAGAGGCCCAAGGCCAGTGGGCATGGCCACTTGCTGCCTGTGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGACCTGCTGCTGTCCCTaGTGGGCCTGCGGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQTCCCP*WACGAL
Trigger: GAGCGCTCCGCAGGCCCAGCAGGGACAGCAGCAGGT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACACCTGCTGCTGTCCCTaGTGGGCCTGCGGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHTCCCP*WACGAL
Trigger: GAGCGCTCCGCAGGCCCAGCAGGGACAGCAGCAGGT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGGCTGGGGCTGGGGCTaGTGGGTGCCTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELGWGWG*WVPKGR
Trigger: TCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELGCAEP*EKRELL
Trigger: GAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGTAGGGGTCCGTCCCTaGGGGAGCAGCGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELVGVRP*GSSADD
Trigger: ATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTAC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGGAGTCGCCCGGGGATaGGCTCAACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQGVARG*AQHILH
Trigger: GTGGAGTATGTGTTGAGCTCATCCCCGGGCGACTCC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGAATGTCCTGGTCCCTaGCTAGGGAGAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQECPGP*LGRGMP
Trigger: GGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGTGGGCTGCTGCAAGTaGATACTGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQVGCCK*ILLLLG
Trigger: GCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCAC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGTGGGCTGCTGCAAGTaGATACTGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQVGCCK*ILLLLG
Trigger: GCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCAC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTGGGCCGAGTGTCGCTaGTGCAGCCAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQWAECR*CSQSSC
Trigger: ACAGCTGGATTGGCTGCAGCAGCGACACTCGGCCCA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGGCCTGCAACTCCTATaGATCCTGGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELGLQLL*ILGQGW
Trigger: CCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTGPIPG*HQGNCC
Trigger: GCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCC...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTTGCACTGCGGTACTTaGCTTCGGCACCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQLHCGT*LRHREQ
Trigger: CTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTTGCACTGCGGTACTTaGCTTCGGCACCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLHCGT*LRHREQ
Trigger: CTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTGCAEP*EKRELL
Trigger: GAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCC...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGATGACAATCTTCCGCTaGCCCGGCTCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELMTIFR*PGSATS
Trigger: CGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCAT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTGCAAGAGCCTGATTTaGAGCTGGCTGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQCKSLI*SWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQVLGTA*NSYGSW
Trigger: CCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGAC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELAWHHW*WSAGLS
Trigger: GCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQAWHHW*WSAGLS
Trigger: GCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGCTGCAAGTGCATACTaGTGCTGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQAASAY*CCWAAV
Trigger: GACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCTGCAAGTGCATACTaGTGCTGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELAASAY*CCWAAV
Trigger: GACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCCGAGTGTCGCTGCTaGAGCCAATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQAECRC*SQSSCV
Trigger: TACACAGCTGGATTGGCTGCAGCAGCGACACTCGGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCCGAGTGTCGCTGCTaGAGCCAATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELAECRC*SQSSCV
Trigger: TACACAGCTGGATTGGCTGCAGCAGCGACACTCGGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTGTAGCTGCTGCAGCTaGAGCTGCCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELCSCCS*SCLLLE
Trigger: TTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGGCACTGCTTGCACTaGGGTACTTGGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELRHCLH*GTWLRH
Trigger: GTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCTGGAGGCACTGCTTaGACTGCGGTACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQAGGTA*TAVLGF
Trigger: GAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQICSWL*LRLRPC
Trigger: ACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAAT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELICSWL*LRLRPC
Trigger: ACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAAT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQSLICS*LWLRLR
Trigger: TCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGACCATAGCGTCGTCCTaGGAACGGCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELTIASS*ERPATP
Trigger: AGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQQAWHH*CWSAGL
Trigger: TAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTGTAGGGGTCCGTCCCTaGGGGAGCAGCGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTVGVRP*GSSADD
Trigger: ATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTAC...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGCTGCTGGAAGAGACTaGCAGGGTAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQAAGRD*QGRHPM
Trigger: CATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGTTTCAGGTGGGGGCTaGAAGAGTCCTGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQVSGGG*KSPAKA
Trigger: TGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAAC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAGGAGGTGGTGTCTGTaGATGTCCTGGTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQRRWCL*MSWSLT
Trigger: AGTCAGGGACCAGGACATTCACAGACACCACCTCCT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCAAGTGCATACTGCTaGTGCTGGGCAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQASAYC*CWAAVN
Trigger: GTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELHQGNC*FRIPRT
Trigger: CGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGTGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQWHQGN*CFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCA...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAAAGGCTGGAGGCACTaGTTGCACTGCGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELKGWRH*LHCGTW
Trigger: CCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAAAGGCTGGAGGCACTaGTTGCACTGCGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQKGWRH*LHCGTW
Trigger: CCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGATCCTGGGACAGGGCTaGAGTGTGTTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELILGQG*SVFQLQ
Trigger: TTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGAT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACACCATAGCGTCGTCCTaGGAACGGCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHTIASS*ERPATP
Trigger: AGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGCCCACTCTCCGACCGTaGGGACAGTACAGAATTGAC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQPTLRP*GQYRID
Trigger: GTCAATTCTGTACTGTCCCCACGGTCGGAGAGTGGG...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAATGATGACTGGGGCTaGAGCAACAAGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQNDDWG*SNKPDW
Trigger: CCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGGAGCTAATGATGACTaGGGCTGGAGCAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQGANDD*GWSNKP
Trigger: CGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACGTTTCAGGTGGGGGCTaGAAGAGTCCTGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHVSGGG*KSPAKA
Trigger: TGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAAC...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGGCTGGGAAACTGAATaGTCTGATGTTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELGWETE*SDVPQA
Trigger: TGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGCAGCTGTCAACTGCTaGACAGCAAGTGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQAAVNC*TASALG
Trigger: ACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCAGCTGTCAACTGCTaGACAGCAAGTGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQAAVNC*TASALG
Trigger: ACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTGTCCCTGCTGGTTCTaGTTTGGGGTCAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELCPCWF*FGVKGR
Trigger: ACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGAGCTGCTTGTGCAGCTaGGGAGCTAATGATGACTGG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQSCLCS*GANDDW
Trigger: CCAGTCATCATTAGCTCCTCAGCTGCACAAGCAGCT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGCTGCTTGTGCAGCTaGGGAGCTAATGATGACTGG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSCLCS*GANDDW
Trigger: CCAGTCATCATTAGCTCCTCAGCTGCACAAGCAGCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGCACGCTCTGTACGTaGGGCGTGAGTAACACACTT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSTLCT*GVSNTL
Trigger: AAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTGCACACCTCATCAATaGGCACAGCACGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQCTPHQ*AQHALY
Trigger: GTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQGVCSS*KSLICS
Trigger: GCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAAGTCCCACAGTTGCTaGTGCAGAGTCCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQKSHSC*CRVHRY
Trigger: GTACCTGTGGACTCTGCAGCAGCAACTGTGGGACTT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGAGAGAAGAGGGAGCTaGTCTGGGAGTTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELERRGS*SGSYCS
Trigger: TGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSLICS*LWLRLR
Trigger: TCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACATCCTGGGACAGGGCTaGAGTGTGTTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHILGQG*SVFQLQ
Trigger: TTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGAT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAACTCCTATGGATCCTaGGACAGGGCTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQNSYGS*DRAGVC
Trigger: ACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGAATCCTCCACAGGCTTaGCACCATTGGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQNPPQA*HHWCWS
Trigger: TGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAGCGCTGATGATGTATaGGTTGGGGACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQSADDV*VGDKRS
Trigger: GCTGCGTTTGTCCCCAACCCATACATCATCAGCGCT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGCGCTGATGATGTATaGGTTGGGGACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSADDV*VGDKRS
Trigger: GCTGCGTTTGTCCCCAACCCATACATCATCAGCGCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGAAGAGGGAGCTGCTCTaGGAGTTACTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQKRELL*ELLLRE
Trigger: CTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAAGAGGGAGCTGCTCTaGGAGTTACTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELKRELL*ELLLRE
Trigger: CTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTCATTGAAGACAAGCTaGCGCTCAGCTGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQSLKTS*RSAAVA
Trigger: TGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCCAATGATAGGACATaGCCTCGAATCCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELANDRT*PRIRSA
Trigger: GGCTGAACGGATTCGAGGCCATGTCCTATCATTGGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTGTTTCAGGTGGGGGCTaGAAGAGTCCTGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTVSGGG*KSPAKA
Trigger: TGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAAC...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELTWCSA*MLSPVG
Trigger: GCCTACAGGGGATAACATTCATGCAGAACACCAGGT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACTGTCCCTGCTGGTTCTaGTTTGGGGTCAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHCPCWF*FGVKGR
Trigger: ACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACA...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACCCAAAGCTTTCTGGATaGCTCGGCAGCCGTACATCT +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHPKLSG*LGSRTS
Trigger: AGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGG...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCACTCAATGCACTTCTaGACCACATGGTTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELHSMHF*TTWLPF
Trigger: GAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGCACTCAATGCACTTCTaGACCACATGGTTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQHSMHF*TTWLPF
Trigger: GAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGGGCTGAAAGAGTCCTaGCAAAGCACTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQGLKES*QSTAFL
Trigger: GAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTCCCACAGTTGCTGCTaGAGAGTCCACAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSHSCC*RVHRYL
Trigger: CAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACAAGTCCCACAGTTGCTaGTGCAGAGTCCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHKSHSC*CRVHRY
Trigger: GTACCTGTGGACTCTGCAGCAGCAACTGTGGGACTT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAAAAAGTCCCACAGTTaGTGCTGCAGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELKKSHS*CCRVHR
Trigger: CCTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQKSRIH*CSCYKG
Trigger: CCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCCAGTGTTGGAGTTTaGAACTGCTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELASVGV*NCCSKP
Trigger: GGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGCCAGTGTTGGAGTTTaGAACTGCTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQASVGV*NCCSKP
Trigger: GGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCCCTCAGAACCATTCTaGTTTGGACCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQPSEPF*FGPRRS
Trigger: GGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACAATCCTCCACAGGCTTaGCACCATTGGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHNPPQA*HHWCWS
Trigger: TGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGTCTGGGACTCCATGTTaGAGAAATCCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQSGTPC*RNPPQA
Trigger: AGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGA...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTCTGGGACTCCATGTTaGAGAAATCCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSGTPC*RNPPQA
Trigger: AGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGTCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQSKGTL*DSMLEK
Trigger: TTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGA...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAAGCCAGATTGTTACTaGGCTGCTGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTKPDCY*AAAEAG
Trigger: CCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAGCCACTGCCAGTGTTaGAGTTTGCAACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQSHCQC*SLQLLF
Trigger: GAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGCCACTGCCAGTGTTaGAGTTTGCAACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSHCQC*SLQLLF
Trigger: GAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSTSRA*PGCACH
Trigger: ATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHTWCSA*MLSPVG
Trigger: GCCTACAGGGGATAACATTCATGCAGAACACCAGGT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGGGACAGTACAGAATTaGCCTCACTGTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQGTVQN*PHCSHG
Trigger: TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAGCTGCTTGTGCAGCTaGGGAGCTAATGATGACTGG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSCLCS*GANDDW
Trigger: CCAGTCATCATTAGCTCCTCAGCTGCACAAGCAGCT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGGGTGCTGCTGGGGCTaGAAAGGCTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGGCCWG*KGWRHC
Trigger: GCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTCCTGGAGGATTTCATTaGAGACAAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTPGGFH*RQAGAQ
Trigger: CTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGG...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQAYLVF*MNVIPC
Trigger: ACAGGGGATAACATTCATGCAGAACACCAGGTACGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQAYLVF*MNVIPC
Trigger: ACAGGGGATAACATTCATGCAGAACACCAGGTACGC...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGGCATCAATCCCATTCTaGACTGGCAAACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELASIPF*TGKPLV
Trigger: GACCAATGGTTTGCCAGTGCAGAATGGGATTGATGC...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCCACAGGTACCTGCGTaGCTGAATAATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQPQVPA*LNNQTA
Trigger: TGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQIHCCS*YKGICL
Trigger: CAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAAT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQIVSSR*QDWITW
Trigger: CCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTAT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTGCTCTGGGAGTTACTaGTCAGAGAGTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELCSGSY*SESCCH
Trigger: ATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTYKGHC*QSGSHG
Trigger: GCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGTCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQSYKGH*CQSGSH
Trigger: GTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGA...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGCAATGGGGGCCAAGCTaGTCGATGTCCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQQWGPS*SMSSYK
Trigger: TTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTG...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTCTGAACCACATGGTTaGCGTTCTGGTCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSEPHG*RSGLSH
Trigger: GTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQWPGCA*HRCTFE
Trigger: TTCGAAAGTACACCTATGGCAAGCACATCCTGGCCA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGACTGTCTGCATCCCTTaGGCCAAATCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQTVCIP*AKSSFS
Trigger: AGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAGT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGCACTGGCAAACCATTaGTCTTGTCCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQALANH*SCPSHL
Trigger: GAGATGTGATGGACAAGACCAATGGTTTGCCAGTGC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAGCGCTGATGATGTATaGGTTGGGGACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSADDV*VGDKRS
Trigger: GCTGCGTTTGTCCCCAACCCATACATCATCAGCGCT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAGGGTAGACACCCCATaGCGTGACTCCATAATATTG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELRVDTP*RDSIIL
Trigger: CAATATTATGGAGTCACGCCATGGGGTGTCTACCCT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGAGGGTAGACACCCCATaGCGTGACTCCATAATATTG +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQRVDTP*RDSIIL
Trigger: CAATATTATGGAGTCACGCCATGGGGTGTCTACCCT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAAGAGGGAGCTGCTCTaGGAGTTACTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTKRELL*ELLLRE
Trigger: CTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHSTSRA*PGCACH
Trigger: ATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACGGGACAGTACAGAATTaGCCTCACTGTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHGTVQN*PHCSHG
Trigger: TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCC...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR GCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHIHCCS*YKGICL
Trigger: CAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAAT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQCSESC*HRKSWK
Trigger: CTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCACCTGCCCCTTGAATaGATCGATGATAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELHLPLE*IDDKLQ
Trigger: TTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGGAGTCGCCCGGGGATaGGCTCAACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGGVARG*AQHILH
Trigger: GTGGAGTATGTGTTGAGCTCATCCCCGGGCGACTCC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR GCA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCTTTTGGTCCATCTTTaGTGGATTCATCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQLLVHL*WIHLFP
Trigger: GGGAAACAGATGAATCCAGCAAAGATGGACCAAAAG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGCTTTTGGTCCATCTTTaGTGGATTCATCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQLLVHL*WIHLFP
Trigger: GGGAAACAGATGAATCCAGCAAAGATGGACCAAAAG...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTIVSSR*QDWITW
Trigger: CCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTAT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGAAAATTCCATTATATaGCCAGCAATCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQENSII*PAISRS
Trigger: ACTGCGGGAGATTGCTGGGCATATAATGGAATTTTC...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACGCATCGATGATAAACTaGAAAGACTGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHASMIN*KDWGCT
Trigger: TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGC...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGACTTCTCCACAACATTaGTTGCAAACTTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQTSPQH*LQTCAD
Trigger: GTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTCGTTAATTACCTGCTaGTCTGAGGGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSLITC*SEGINS
Trigger: GGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTCGTTAATTACCTGCTaGTCTGAGGGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQSLITC*SEGINS
Trigger: GGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGCTTGCAAACTTGTGCTaGCTCAATACAAGTACATTG +
Preference number: 4 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQLANLC*LNTSTL
Trigger: CAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAG...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCTTGCAAACTTGTGCTaGCTCAATACAAGTACATTG +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLANLC*LNTSTL
Trigger: CAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTGCAAGAGCCTGATTTaGAGCTGGCTGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGCKSLI*SWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCA...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTGCATCGATGATAAACTaGAAAGACTGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTASMIN*KDWGCT
Trigger: TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGC...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTCTCTGCTACAATTTTaGTTTTATCCTCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELSLLQF*FYPQDD
Trigger: GTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTAATCCCATTCTGCACTaGCAAACCATTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTNPILH*QTIGLV
Trigger: GACAAGACCAATGGTTTGCCAGTGCAGAATGGGATT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCTGCTGGAAGAGACTaGCAGGGTAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGAAGRD*QGRHPM
Trigger: CATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGGCGCTCAGCTGCTGTaGCACGCTCTAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGGAQLL*HALVSA
Trigger: AGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGGGTGCTGCTGGGGCTaGAAAGGCTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSGCCWG*KGWRHC
Trigger: GCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAATGCTCTGTGTGCTGGTaGAGCTCCTCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKCSVCW*SSSRMG
Trigger: CCCCATCCTGGAGGAGCTTCACCAGCACACAGAGCA...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACCCCTTCCAGAGCAAGTaGTTGAAAATCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: PASQCSHRQPQAASGHAHPFQSK*LKIMIQ
Trigger: TTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGG...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCAAGTGCATACTGCTaGTGCTGGGCAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGASAYC*CWAAVN
Trigger: GTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGCAGCTGCAGCTGCCTaGTGCTGGAAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKAAAAA*CWKRLA
Trigger: TGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCACCTGCTGCTGTCCCTaGTGGGCCTGCGGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLTCCCP*WACGAL
Trigger: GAGCGCTCCGCAGGCCCAGCAGGGACAGCAGCAGGT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGCTGGGGCTGGGGCTaGTGGGTGCCTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGWGWG*WVPKGR
Trigger: TCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGGCTGGGGCTGGGGCTaGTGGGTGCCTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSGWGWG*WVPKGR
Trigger: TCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTCATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTHVGIS*FLRVMF
Trigger: AAACATCACCCTCAAGAACCAGCTAATCCCAACATG...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGGCCTGCAACTCCTATaGATCCTGGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKGLQLL*ILGQGW
Trigger: CCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTTGGTGCTGGTCAGCTaGGCTAAGCCCTCAGAACCA +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGLVLVS*AKPSEP
Trigger: TGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAA...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSGCAEP*EKRELL
Trigger: GAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGGTGCTGCTGGGGCTaGAAAGGCTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGCCWG*KGWRHC
Trigger: GCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTACCTGCTGCTGTCCCTaGTGGGCCTGCGGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAITCCCP*WACGAL
Trigger: GAGCGCTCCGCAGGCCCAGCAGGGACAGCAGCAGGT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCACGAAGAACCTGCTaGTGTCCCTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPRRTC*CPCWAC
Trigger: GCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCCTCCACGAAGAACCTaGTGCTGTCCCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSPPRRT*CCPCWA
Trigger: GGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGCTGGGGCTGGGGCTaGTGGGTGCCTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGWGWG*WVPKGR
Trigger: TCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGGCTGGGGCTGGGGCTaGTGGGTGCCTAAAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLGWGWG*WVPKGR
Trigger: TCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGRQPYI*SANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTCTCTGCTACAATTTTaGTTTTATCCTCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSLLQF*FYPQDD
Trigger: GTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTCAATACAAGTACATTaGCTCGGATCTCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTSIQVH*LGSLLQ
Trigger: TTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTGPIPG*HQGNCC
Trigger: GCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGPIPG*HQGNCC
Trigger: GCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLGPIPG*HQGNCC
Trigger: GCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTCATTGAAGACAAGCTaGCGCTCAGCTGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGSLKTS*RSAAVA
Trigger: TGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGA...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGCAEP*EKRELL
Trigger: GAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGGTGCTGCTGGGGCTaGAAAGGCTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGCCWG*KGWRHC
Trigger: GCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGCTCTGTGTGCTGGTaGAGCTCCTCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPCSVCW*SSSRMG
Trigger: CCCCATCCTGGAGGAGCTTCACCAGCACACAGAGCA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCTCTGTACGTGAGGCGTaGGTAACACACTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGSVREA*VTHFST
Trigger: TGTGGAGAAGTGTGTTACTCACGCCTCACGTACAGA...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGCTGTGGCTGCGCTTaGGACCCTGTTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGCGCA*DPVPDV
Trigger: GACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCAGCTGGCTGTGGCTaGGCTTGCGACCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAAGCG*ACDPVP
Trigger: TGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGCAGCTGGCTGTGGCTaGGCTTGCGACCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLAAGCG*ACDPVP
Trigger: TGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGCAAGTGCATACTGCTaGTGCTGGGCAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKASAYC*CWAAVN
Trigger: GTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGGGCCGAGTGTCGCTaGTGCAGCCAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPWAECR*CSQSSC
Trigger: ACAGCTGGATTGGCTGCAGCAGCGACACTCGGCCCA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGCTGCAGCTGCCTGCTaGTGGAAGAGACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAAAAAC*WKRLAG
Trigger: CCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCTGCAGCTGCCTGCTaGTGGAAGAGACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAAAAC*WKRLAG
Trigger: CCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCTGCAGCTGCCTGCTaGTGGAAGAGACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVAAAAC*WKRLAG
Trigger: CCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCAGCTGCAGCTGCCTaGTGCTGGAAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTAAAAA*CWKRLA
Trigger: TGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCAGCTGCAGCTGCCTaGTGCTGGAAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPAAAAA*CWKRLA
Trigger: TGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKSRVCS*CSCSCL
Trigger: CAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCCACGAAGAACCTGCTaGTGTCCCTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDPRRTC*CPCWAC
Trigger: GCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCTCCACGAAGAACCTaGTGCTGTCCCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLPPRRT*CCPCWA
Trigger: GGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACCTCCACGAAGAACCTaGTGCTGTCCCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAPPRRT*CCPCWA
Trigger: GGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTATTGCCTCGGATCTCTaGTACAATTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTIASDL*YNFAFI
Trigger: GATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAAT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGGCCTGCAACTCCTATaGATCCTGGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTGLQLL*ILGQGW
Trigger: CCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGCCTGCAACTCCTATaGATCCTGGGACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGLQLL*ILGQGW
Trigger: CCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACCCACTCTCCGACCGTaGGGACAGTACAGAATTGAC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKPTLRP*GQYRID
Trigger: GTCAATTCTGTACTGTCCCCACGGTCGGAGAGTGGG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGTAGGGGTCCGTCCCTaGGGGAGCAGCGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTVGVRP*GSSADD
Trigger: ATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTAC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGGAGCTAATGATGACTaGGGCTGGAGCAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKGANDD*GWSNKP
Trigger: CGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGPIPG*HQGNCC
Trigger: GCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGAAGCTCCTCCAGGATaGGGAGGGTCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPEAPPG*GGSGQG
Trigger: TCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGAAGCTCCTCCAGGATaGGGAGGGTCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTEAPPG*GGSGQG
Trigger: TCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGGAGTCGCCCGGGGATaGGCTCAACACATACTCCAC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAGVARG*AQHILH
Trigger: GTGGAGTATGTGTTGAGCTCATCCCCGGGCGACTCC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGAATGTCCTGGTCCCTaGCTAGGGAGAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVECPGP*LGRGMP
Trigger: GGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGAATGTCCTGGTCCCTaGCTAGGGAGAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTECPGP*LGRGMP
Trigger: GGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGAATGTCCTGGTCCCTaGCTAGGGAGAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAECPGP*LGRGMP
Trigger: GGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGGGTGCTGCTGGGGCTaGAAAGGCTGGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLGCCWG*KGWRHC
Trigger: GCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACCTGGAGGATTTCATTaGAGACAAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKPGGFH*RQAGAQ
Trigger: CTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTGCTCTGTGTGCTGGTaGAGCTCCTCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLCSVCW*SSSRMG
Trigger: CCCCATCCTGGAGGAGCTTCACCAGCACACAGAGCA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAGCACGCTCTGTACGTaGGGCGTGAGTAACACACTT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKSTLCT*GVSNTL
Trigger: AAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCATGACAATCTTCCGCTaGCCCGGCTCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSMTIFR*PGSATS
Trigger: CGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCAT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAATGACAATCTTCCGCTaGCCCGGCTCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPMTIFR*PGSATS
Trigger: CGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCAT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGCTGTGGCTGCGCTTaGGACCCTGTTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGCGCA*DPVPDV
Trigger: GACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGGCTGTGGCTGCGCTTaGGACCCTGTTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLGCGCA*DPVPDV
Trigger: GACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGCAGCTGGCTGTGGCTaGGCTTGCGACCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYAAGCG*ACDPVP
Trigger: TGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCAGCTGGCTGTGGCTaGGCTTGCGACCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGAAGCG*ACDPVP
Trigger: TGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCATCAATCCCATTCTaGACTGGCAAACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGASIPF*TGKPLV
Trigger: GACCAATGGTTTGCCAGTGCAGAATGGGATTGATGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSAWHHW*WSAGLS
Trigger: GCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCTGCAAGTGCATACTaGTGCTGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSAASAY*CCWAAV
Trigger: GACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGTGGGCTGCTGCAAGTaGATACTGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDVGCCK*ILLLLG
Trigger: GCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCAC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGTGGGCTGCTGCAAGTaGATACTGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLVGCCK*ILLLLG
Trigger: GCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCAC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATGGGCCGAGTGTCGCTaGTGCAGCCAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAWAECR*CSQSSC
Trigger: ACAGCTGGATTGGCTGCAGCAGCGACACTCGGCCCA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGCTGCAGCTGCCTGCTaGTGGAAGAGACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIAAAAC*WKRLAG
Trigger: CCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCAGCTGCAGCTGCCTaGTGCTGGAAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVAAAAA*CWKRLA
Trigger: TGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCAGCTGCAGCTGCCTaGTGCTGGAAGAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAAAAA*CWKRLA
Trigger: TGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTAGCTGCTGCAGCTaGAGCTGCCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPCSCCS*SCLLLE
Trigger: TTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCCACGAAGAACCTGCTaGTGTCCCTGCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGPRRTC*CPCWAC
Trigger: GCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCCTCCACGAAGAACCTaGTGCTGTCCCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYPPRRT*CCPCWA
Trigger: GGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAGGCACTGCTTGCACTaGGGTACTTGGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSRHCLH*GTWLRH
Trigger: GTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCTGGAGGCACTGCTTaGACTGCGGTACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTAGGTA*TAVLGF
Trigger: GAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPICSWL*LRLRPC
Trigger: ACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAAT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSQAWHH*CWSAGL
Trigger: TAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTQAWHH*CWSAGL
Trigger: TAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGTAGGGGTCCGTCCCTaGGGGAGCAGCGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIVGVRP*GSSADD
Trigger: ATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTAC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCTGCTGGAAGAGACTaGCAGGGTAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPAAGRD*QGRHPM
Trigger: CATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATTGCACTGCGGTACTTaGCTTCGGCACCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRALHCGT*LRHREQ
Trigger: CTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATTGCACTGCGGTACTTaGCTTCGGCACCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTLHCGT*LRHREQ
Trigger: CTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTTGCACTGCGGTACTTaGCTTCGGCACCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVLHCGT*LRHREQ
Trigger: CTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGGCGCTCAGCTGCTGTaGCACGCTCTAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSGAQLL*HALVSA
Trigger: AGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGAAGCTCCTCCAGGATaGGGAGGGTCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDEAPPG*GGSGQG
Trigger: TCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGTTTCAGGTGGGGGCTaGAAGAGTCCTGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSVSGGG*KSPAKA
Trigger: TGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAAC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAGGAGGTGGTGTCTGTaGATGTCCTGGTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPRRWCL*MSWSLT
Trigger: AGTCAGGGACCAGGACATTCACAGACACCACCTCCT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACACTCAATGCACTTCTaGACCACATGGTTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKHSMHF*TTWLPF
Trigger: GAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGCTCTGTGTGCTGGTaGAGCTCCTCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYCSVCW*SSSRMG
Trigger: CCCCATCCTGGAGGAGCTTCACCAGCACACAGAGCA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTATGACAATCTTCCGCTaGCCCGGCTCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVMTIFR*PGSATS
Trigger: CGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCAT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACTCGTTCTGCTGGTCTaGGGGAATAAACTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKLVLLV*GNKLQS
Trigger: GCTTTGGAGTTTATTCCCTCAGACCAGCAGAACGAG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105991.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGCTGTGGCTGCGCTTaGGACCCTGTTCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGCGCA*DPVPDV
Trigger: GACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATGCAAGAGCCTGATTTaGAGCTGGCTGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTCKSLI*SWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTGCAAGAGCCTGATTTaGAGCTGGCTGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDCKSLI*SWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTVLGTA*NSYGSW
Trigger: CCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGAC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAAWHHW*WSAGLS
Trigger: GCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAAAAAGTCCCACAGTTaGTGCTGCAGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKKKSHS*CCRVHR
Trigger: CCTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAGTGCATACTGCTGCTaGTGGGCAGCTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSAYCC*WAAVNC
Trigger: GCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGCTGCAAGTGCATACTaGTGCTGCTGGGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTAASAY*CCWAAV
Trigger: GACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGCCGAGTGTCGCTGCTaGAGCCAATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLAECRC*SQSSCV
Trigger: TACACAGCTGGATTGGCTGCAGCAGCGACACTCGGC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGTGGGCCGAGTGTCGCTaGTGCAGCCAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGWAECR*CSQSSC
Trigger: ACAGCTGGATTGGCTGCAGCAGCGACACTCGGCCCA...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTGTAGCTGCTGCAGCTaGAGCTGCCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVCSCCS*SCLLLE
Trigger: TTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATGTAGCTGCTGCAGCTaGAGCTGCCTGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRACSCCS*SCLLLE
Trigger: TTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTSRVCS*CSCSCL
Trigger: CAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSRVCS*CSCSCL
Trigger: CAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCCATTTCTTGCCCCTaGATTCACCACAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSAISCP*IHHKGT
Trigger: GGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCCATTTCTTGCCCCTaGATTCACCACAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTAISCP*IHHKGT
Trigger: GGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTHQGNC*FRIPRT
Trigger: CGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPHQGNC*FRIPRT
Trigger: CGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSWHQGN*CFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAGGCACTGCTTGCACTaGGGTACTTGGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRARHCLH*GTWLRH
Trigger: GTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCTGGAGGCACTGCTTaGACTGCGGTACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAGGTA*TAVLGF
Trigger: GAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGCTGGAGGCACTGCTTaGACTGCGGTACTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTAGGTA*TAVLGF
Trigger: GAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAAAGGCTGGAGGCACTaGTTGCACTGCGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSKGWRH*LHCGTW
Trigger: CCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSLICS*LWLRLR
Trigger: TCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRASLICS*LWLRLR
Trigger: TCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTACCATAGCGTCGTCCTaGGAACGGCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVTIASS*ERPATP
Trigger: AGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAACCATAGCGTCGTCCTaGGAACGGCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTTIASS*ERPATP
Trigger: AGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVWHHWC*SAGLSP
Trigger: AGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDQAWHH*CWSAGL
Trigger: TAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAATCTGGGACTCCATGTTaGAGAAATCCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKSGTPC*RNPPQA
Trigger: AGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGA...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCTGCTGGAAGAGACTaGCAGGGTAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVAAGRD*QGRHPM
Trigger: CATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGGGTCAAAGGACGTTaGCTAGCTCCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGVKGR*LAPPRR
Trigger: TCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGAGCTAATGATGACTaGGGCTGGAGCAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGANDD*GWSNKP
Trigger: CGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGCGCTCAGCTGCTGTaGCACGCTCTAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGAQLL*HALVSA
Trigger: AGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGGCGCTCAGCTGCTGTaGCACGCTCTAGTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTGAQLL*HALVSA
Trigger: AGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGAAGCTCCTCCAGGATaGGGAGGGTCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGEAPPG*GGSGQG
Trigger: TCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGAAGCTCCTCCAGGATaGGGAGGGTCTGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIEAPPG*GGSGQG
Trigger: TCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGTTTCAGGTGGGGGCTaGAAGAGTCCTGCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVVSGGG*KSPAKA
Trigger: TGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAAC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGGCTGGGAAACTGAATaGTCTGATGTTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPGWETE*SDVPQA
Trigger: TGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACATGTCCCTGCTGGTTCTaGTTTGGGGTCAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTCPCWF*FGVKGR
Trigger: ACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACA...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLGCAEP*EKRELL
Trigger: GAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGAATGTCCTGGTCCCTaGCTAGGGAGAGGCATGCCC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLECPGP*LGRGMP
Trigger: GGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAGGAGGTGGTGTCTGTaGATGTCCTGGTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDRRWCL*MSWSLT
Trigger: AGTCAGGGACCAGGACATTCACAGACACCACCTCCT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAGGAGGTGGTGTCTGTaGATGTCCTGGTCCCTGACT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVRRWCL*MSWSLT
Trigger: AGTCAGGGACCAGGACATTCACAGACACCACCTCCT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATTCCACTGCCGTTTGTaGGTCCTCCCAGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPFHCRL*VLPGLS
Trigger: GCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTTCCACTGCCGTTTGTaGGTCCTCCCAGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSFHCRL*VLPGLS
Trigger: GCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACCTGGAGGATTTCATTaGAGACAAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTPGGFH*RQAGAQ
Trigger: CTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCCAAAGCTTTCTGGATaGCTCGGCAGCCGTACATCT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSPKLSG*LGSRTS
Trigger: AGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCAAAGCTTTCTGGATaGCTCGGCAGCCGTACATCT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPKLSG*LGSRTS
Trigger: AGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATGCTCTGTGTGCTGGTaGAGCTCCTCCAGGATGGGG +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLCSVCW*SSSRMG
Trigger: CCCCATCCTGGAGGAGCTTCACCAGCACACAGAGCA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAGCACGCTCTGTACGTaGGGCGTGAGTAACACACTT +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTSTLCT*GVSNTL
Trigger: AAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAGCACGCTCTGTACGTaGGGCGTGAGTAACACACTT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSTLCT*GVSNTL
Trigger: AAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGCACACCTCATCAATaGGCACAGCACGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPCTPHQ*AQHALY
Trigger: GTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTATGACAATCTTCCGCTaGCCCGGCTCAGCCACATCG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIMTIFR*PGSATS
Trigger: CGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCAT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTGVCSS*KSLICS
Trigger: GCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYVLGTA*NSYGSW
Trigger: CCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGAC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIVLGTA*NSYGSW
Trigger: CCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGAC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATCCCACAGTTGCTGCTaGAGAGTCCACAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTSHSCC*RVHRYL
Trigger: CAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAGTGCATACTGCTGCTaGTGGGCAGCTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVSAYCC*WAAVNC
Trigger: GCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAGTGCATACTGCTGCTaGTGGGCAGCTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTSAYCC*WAAVNC
Trigger: GCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCAAGTGCATACTGCTaGTGCTGGGCAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVASAYC*CWAAVN
Trigger: GTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCAAGTGCATACTGCTaGTGCTGGGCAGCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDASAYC*CWAAVN
Trigger: GTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGTGGGCTGCTGCAAGTaGATACTGCTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLVGCCK*ILLLLG
Trigger: GCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCAC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGCCGAGTGTCGCTGCTaGAGCCAATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIAECRC*SQSSCV
Trigger: TACACAGCTGGATTGGCTGCAGCAGCGACACTCGGC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCCGAGTGTCGCTGCTaGAGCCAATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGAECRC*SQSSCV
Trigger: TACACAGCTGGATTGGCTGCAGCAGCGACACTCGGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRASRVCS*CSCSCL
Trigger: CAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCCATTTCTTGCCCCTaGATTCACCACAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAISCP*IHHKGT
Trigger: GGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGAGAGAAGAGGGAGCTaGTCTGGGAGTTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTERRGS*SGSYCS
Trigger: TGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDWHQGN*CFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLWHQGN*CFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACATATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTYKGHC*QSGSHG
Trigger: GCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATA...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAAAGGCTGGAGGCACTaGTTGCACTGCGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLKGWRH*LHCGTW
Trigger: CCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGAAAATTCCATTATATaGCCAGCAATCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: NTICYDHKRWDIQSARAGENSII*PAISRS
Trigger: ACTGCGGGAGATTGCTGGGCATATAATGGAATTTTC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGTTTTCATCACTGTCTaGATCCCTTGGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLVFITV*IPWALA
Trigger: GGCGAGGGCCCAAGGGATGCAGACAGTGATGAAAAC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGICSWL*LRLRPC
Trigger: ACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAAT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISLICS*LWLRLR
Trigger: TCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATATCCTGGGACAGGGCTaGAGTGTGTTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDILGQG*SVFQLQ
Trigger: TTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGAT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATACCATAGCGTCGTCCTaGGAACGGCCTGCAACTCCT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYTIASS*ERPATP
Trigger: AGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGCACTGGCAAACCATTaGTCTTGTCCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKALANH*SCPSHL
Trigger: GAGATGTGATGGACAAGACCAATGGTTTGCCAGTGC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGWHHWC*SAGLSP
Trigger: AGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCA...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIWHHWC*SAGLSP
Trigger: AGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYWHHWC*SAGLSP
Trigger: AGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAATCCTCCACAGGCTTaGCACCATTGGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPNPPQA*HHWCWS
Trigger: TGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAATCCTCCACAGGCTTaGCACCATTGGTGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSNPPQA*HHWCWS
Trigger: TGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTGCCCACATGTTCCATaGGGTCCAAGGGGACACTCT +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLCPHVP*GPRGHS
Trigger: AGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAGCGCTGATGATGTATaGGTTGGGGACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTSADDV*VGDKRS
Trigger: GCTGCGTTTGTCCCCAACCCATACATCATCAGCGCT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGCTGCTGGAAGAGACTaGCAGGGTAGACACCCCATG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYAAGRD*QGRHPM
Trigger: CATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGGGGTCAAAGGACGTTaGCTAGCTCCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLGVKGR*LAPPRR
Trigger: TCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAATGATGACTGGGGCTaGAGCAACAAGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLNDDWG*SNKPDW
Trigger: CCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAATGATGACTGGGGCTaGAGCAACAAGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRANDDWG*SNKPDW
Trigger: CCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGGAGCTAATGATGACTaGGGCTGGAGCAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVGANDD*GWSNKP
Trigger: CGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAAGCCAGATTGTTACTaGGCTGCTGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAKPDCY*AAAEAG
Trigger: CCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAAGCCAGATTGTTACTaGGCTGCTGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTKPDCY*AAAEAG
Trigger: CCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAAGAGGGAGCTGCTCTaGGAGTTACTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPKRELL*ELLLRE
Trigger: CTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATCATTGAAGACAAGCTaGCGCTCAGCTGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSLKTS*RSAAVA
Trigger: TGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAACATCCACCATAAGTTaGTACGCAGCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKTSTIS*YAAWRI
Trigger: AATCCTCCAGGCTGCGTACCAACTTATGGTGGATGT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTACTGTCTGCATCCCTTaGGCCCTCGCCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAITVCIP*ALAHSS
Trigger: AGAGCTATGGGCGAGGGCCCAAGGGATGCAGACAGT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPTWCSA*MLSPVG
Trigger: GCCTACAGGGGATAACATTCATGCAGAACACCAGGT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCACTGTCTCGCCATTaGTCACCCAGGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPALSRH*SPRNIP
Trigger: AGGAATATTCCTGGGTGATCAATGGCGAGACAGTGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCACTGTCTCGCCATTaGTCACCCAGGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSALSRH*SPRNIP
Trigger: AGGAATATTCCTGGGTGATCAATGGCGAGACAGTGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTRYLRA*IIKLQR
Trigger: CCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCAGCTGTCAACTGCTaGACAGCAAGTGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVAAVNC*TASALG
Trigger: ACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAGCTGCTTGTGCAGCTaGGGAGCTAATGATGACTGG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVSCLCS*GANDDW
Trigger: CCAGTCATCATTAGCTCCTCAGCTGCACAAGCAGCT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTTCCACTGCCGTTTGTaGGTCCTCCCAGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDFHCRL*VLPGLS
Trigger: GCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTTCCACTGCCGTTTGTaGGTCCTCCCAGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVFHCRL*VLPGLS
Trigger: GCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATTCCACTGCCGTTTGTaGGTCCTCCCAGGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAFHCRL*VLPGLS
Trigger: GCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCCTGGAGGATTTCATTaGAGACAAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDPGGFH*RQAGAQ
Trigger: CTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAGCACGCTCTGTACGTaGGGCGTGAGTAACACACTT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTSTLCT*GVSNTL
Trigger: AAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTGCACACCTCATCAATaGGCACAGCACGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVCTPHQ*AQHALY
Trigger: GTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATGCACACCTCATCAATaGGCACAGCACGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTCTPHQ*AQHALY
Trigger: GTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATGCAAGAGCCTGATTTaGAGCTGGCTGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLCKSLI*SWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVGVCSS*KSLICS
Trigger: GCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTCCCACAGTTGCTGCTaGAGAGTCCACAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSHSCC*RVHRYL
Trigger: CAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTCCCACAGTTGCTGCTaGAGAGTCCACAGGTACCTG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISHSCC*RVHRYL
Trigger: CAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTGCATACTGCTGCTaGTGGGCAGCTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISAYCC*WAAVNC
Trigger: GCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATAGTGCATACTGCTGCTaGTGGGCAGCTGTCAACTGC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSAYCC*WAAVNC
Trigger: GCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGSRVCS*CSCSCL
Trigger: CAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSKSRIH*CSCYKG
Trigger: CCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCCATTTCTTGCCCCTaGATTCACCACAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGAISCP*IHHKGT
Trigger: GGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGAGAGAAGAGGGAGCTaGTCTGGGAGTTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDERRGS*SGSYCS
Trigger: TGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGAGAGAAGAGGGAGCTaGTCTGGGAGTTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLERRGS*SGSYCS
Trigger: TGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYHQGNC*FRIPRT
Trigger: CGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIHQGNC*FRIPRT
Trigger: CGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCCAGTGTTGGAGTTTaGAACTGCTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPASVGV*NCCSKP
Trigger: GGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDYKGHC*QSGSHG
Trigger: GCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTYKGHC*QSGSHG
Trigger: GCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAGGCACTGCTTGCACTaGGGTACTTGGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLRHCLH*GTWLRH
Trigger: GTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVRQPYI*SANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLRQPYI*SANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGCTGTACACACTCAATaGACTTCTGAACCACATGGT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKAVHTQ*TSEPHG
Trigger: ACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACACCTGCCCCTTGAATaGATCGATGATAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKHLPLE*IDDKLQ
Trigger: TTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGT +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLICSWL*LRLRPC
Trigger: ACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAAT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTATCCTGGGACAGGGCTaGAGTGTGTTCCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIILGQG*SVFQLQ
Trigger: TTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGAT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAACTCCTATGGATCCTaGGACAGGGCTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTNSYGS*DRAGVC
Trigger: ACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAACTCCTATGGATCCTaGGACAGGGCTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRANSYGS*DRAGVC
Trigger: ACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCCCACTCTCCGACCGTaGGGACAGTACAGAATTGAC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYPTLRP*GQYRID
Trigger: GTCAATTCTGTACTGTCCCCACGGTCGGAGAGTGGG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACCCTCAGAACCATTCTaGTTTGGACCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTPSEPF*FGPRRS
Trigger: GGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTTGGTGCTGGTCAGCTaGGCTAAGCCCTCAGAACCA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAILVLVS*AKPSEP
Trigger: TGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTCTGGGACTCCATGTTaGAGAAATCCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSGTPC*RNPPQA
Trigger: AGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSKGTL*DSMLEK
Trigger: TTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTGCCCACATGTTCCATaGGGTCCAAGGGGACACTCT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAICPHVP*GPRGHS
Trigger: AGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGCCCACATGTTCCATaGGGTCCAAGGGGACACTCT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYCPHVP*GPRGHS
Trigger: AGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAGCGCTGATGATGTATaGGTTGGGGACAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLSADDV*VGDKRS
Trigger: GCTGCGTTTGTCCCCAACCCATACATCATCAGCGCT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGGGTCAAAGGACGTTaGCTAGCTCCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGVKGR*LAPPRR
Trigger: TCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGAATGATGACTGGGGCTaGAGCAACAAGCCGGACTGG +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGNDDWG*SNKPDW
Trigger: CCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGAGCTAATGATGACTaGGGCTGGAGCAACAAGCCG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGANDD*GWSNKP
Trigger: CGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATAAGCCAGATTGTTACTaGGCTGCTGCTGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYKPDCY*AAAEAG
Trigger: CCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAAGAGGGAGCTGCTCTaGGAGTTACTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAKRELL*ELLLRE
Trigger: CTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAAAAACTGTGTCCAATaGGGGCCAAGCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTKNCVQ*GPSCSM
Trigger: CATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAAAAACTGTGTCCAATaGGGGCCAAGCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSKNCVQ*GPSCSM
Trigger: CATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKSWYAA*RISLKT
Trigger: TGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGCCAATGATAGGACATaGCCTCGAATCCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLANDRT*PRIRSA
Trigger: GGCTGAACGGATTCGAGGCCATGTCCTATCATTGGC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDTWCSA*MLSPVG
Trigger: GCCTACAGGGGATAACATTCATGCAGAACACCAGGT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRARYLRA*IIKLQR
Trigger: CCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLRYLRA*IIKLQR
Trigger: CCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCAGCTGTCAACTGCTaGACAGCAAGTGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGAAVNC*TASALG
Trigger: ACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTGTCCCTGCTGGTTCTaGTTTGGGGTCAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAICPCWF*FGVKGR
Trigger: ACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGTCCCTGCTGGTTCTaGTTTGGGGTCAAAGGACGT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYCPCWF*FGVKGR
Trigger: ACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCCTGGAGGATTTCATTaGAGACAAGCTGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYPGGFH*RQAGAQ
Trigger: CTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATCTGTACGTGAGGCGTaGGTAACACACTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRASVREA*VTHFST
Trigger: TGTGGAGAAGTGTGTTACTCACGCCTCACGTACAGA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTCTGTACGTGAGGCGTaGGTAACACACTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVSVREA*VTHFST
Trigger: TGTGGAGAAGTGTGTTACTCACGCCTCACGTACAGA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIGVCSS*KSLICS
Trigger: GCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCACAGGTACCTGCGTaGCTGAATAATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPQVPA*LNNQTA
Trigger: TGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAAGTCCCACAGTTGCTaGTGCAGAGTCCACAGGTAC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIKSHSC*CRVHRY
Trigger: GTACCTGTGGACTCTGCAGCAGCAACTGTGGGACTT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAAAAAGTCCCACAGTTaGTGCTGCAGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTKKSHS*CCRVHR
Trigger: CCTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVKSRIH*CSCYKG
Trigger: CCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAKSRIH*CSCYKG
Trigger: CCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPIVSSR*QDWITW
Trigger: CCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTAT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTIVSSR*QDWITW
Trigger: CCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTAT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGCCATTTCTTGCCCCTaGATTCACCACAAGGGCACC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLAISCP*IHHKGT
Trigger: GGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGCTCTGGGAGTTACTaGTCAGAGAGTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPCSGSY*SESCCH
Trigger: ATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGAGAGAAGAGGGAGCTaGTCTGGGAGTTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYERRGS*SGSYCS
Trigger: TGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLWHQGN*CFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCCAGTGTTGGAGTTTaGAACTGCTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDASVGV*NCCSKP
Trigger: GGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSYKGH*CQSGSH
Trigger: GTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGRQPYI*SANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIRQPYI*SANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATCTGAACCACATGGTTaGCGTTCTGGTCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSEPHG*RSGLSH
Trigger: GTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATCCTCAGGACGACCATaGTCCAGTACATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSSGRP*SSTCWI
Trigger: AATCCAACATGTACTGGAGCATGGTCGTCCTGAGGA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACATGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTWPGCA*HRCTFE
Trigger: TTCGAAAGTACACCTATGGCAAGCACATCCTGGCCA...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKHVGIS*FLRVMF
Trigger: AAACATCACCCTCAAGAACCAGCTAATCCCAACATG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCAAAACTTTTTACCTaGCAAGAGCTGCTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPKLFT*QELLAH
Trigger: ATGGGCGAGCAGCTCTTGCCAGGTAAAAAGTTTTGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCACTGGCAAACCATTaGTCTTGTCCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPALANH*SCPSHL
Trigger: GAGATGTGATGGACAAGACCAATGGTTTGCCAGTGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCTCAGAACCATTCTaGTTTGGACCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVPSEPF*FGPRRS
Trigger: GGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATTGGTGCTGGTCAGCTaGGCTAAGCCCTCAGAACCA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLLVLVS*AKPSEP
Trigger: TGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSKGTL*DSMLEK
Trigger: TTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKEQQVH*VFGIAV
Trigger: AACAGCTATTCCAAAGACCCAATGCACTTGCTGTTC...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAGGGTAGACACCCCATaGCGTGACTCCATAATATTG +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTRVDTP*RDSIIL
Trigger: CAATATTATGGAGTCACGCCATGGGGTGTCTACCCT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGGGGTCAAAGGACGTTaGCTAGCTCCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLGVKGR*LAPPRR
Trigger: TCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAGCCACTGCCAGTGTTaGAGTTTGCAACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSHCQC*SLQLLF
Trigger: GAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAAAAACTGTGTCCAATaGGGGCCAAGCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDKNCVQ*GPSCSM
Trigger: CATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAAAAACTGTGTCCAATaGGGGCCAAGCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAKNCVQ*GPSCSM
Trigger: CATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTCATTGAAGACAAGCTaGCGCTCAGCTGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSLKTS*RSAAVA
Trigger: TGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAACATCCACCATAAGTTaGTACGCAGCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTTSTIS*YAAWRI
Trigger: AATCCTCCAGGCTGCGTACCAACTTATGGTGGATGT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAACATCCACCATAAGTTaGTACGCAGCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPTSTIS*YAAWRI
Trigger: AATCCTCCAGGCTGCGTACCAACTTATGGTGGATGT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGCCAATGATAGGACATaGCCTCGAATCCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIANDRT*PRIRSA
Trigger: GGCTGAACGGATTCGAGGCCATGTCCTATCATTGGC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGCCAATGATAGGACATaGCCTCGAATCCGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYANDRT*PRIRSA
Trigger: GGCTGAACGGATTCGAGGCCATGTCCTATCATTGGC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAATCGTTAATTACCTGCTaGTCTGAGGGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKSLITC*SEGINS
Trigger: GGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGA...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVSTSRA*PGCACH
Trigger: ATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAACCATCTCGTTCTGCTaGTCTGAGGGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPTISFC*SEGINS
Trigger: GGAGTTTATTCCCTCAGACCAGCAGAACGAGATGGT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097864.9
ENSMUST00000105991.9
CDS-3UTR TCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAITWCSA*MLSPVG
Trigger: GCCTACAGGGGATAACATTCATGCAGAACACCAGGT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGRYLRA*IIKLQR
Trigger: CCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTACCAAAGCTTTCTGGATaGCTCGGCAGCCGTACATCT +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLPKLSG*LGSRTS
Trigger: AGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGG...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCACTCAATGCACTTCTaGACCACATGGTTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIHSMHF*TTWLPF
Trigger: GAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACTTGCAAACTTGTGCTaGCTCAATACAAGTACATTG +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKLANLC*LNTSTL
Trigger: CAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATGCACACCTCATCAATaGGCACAGCACGCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLCTPHQ*AQHALY
Trigger: GTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCTCGTTCTGCTGGTCTaGGGGAATAAACTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYLVLLV*GNKLQS
Trigger: GCTTTGGAGTTTATTCCCTCAGACCAGCAGAACGAG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097864.9
ENSMUST00000105991.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLAYLVF*MNVIPC
Trigger: ACAGGGGATAACATTCATGCAGAACACCAGGTACGC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDAYLVF*MNVIPC
Trigger: ACAGGGGATAACATTCATGCAGAACACCAGGTACGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGCATCAATCCCATTCTaGACTGGCAAACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVASIPF*TGKPLV
Trigger: GACCAATGGTTTGCCAGTGCAGAATGGGATTGATGC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAAAATCTTTGACGTCTaGATCAATCCCATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKKIFDV*INPILH
Trigger: GTGCAGAATGGGATTGATGCAGACGTCAAAGATTTT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATAAAAAGTCCCACAGTTaGTGCTGCAGAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYKKSHS*CCRVHR
Trigger: CCTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAIHCCS*YKGICL
Trigger: CAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAAT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIKSRIH*CSCYKG
Trigger: CCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLIVSSR*QDWITW
Trigger: CCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTAT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSCSESC*HRKSWK
Trigger: CTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTGCTCTGGGAGTTACTaGTCAGAGAGTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVCSGSY*SESCCH
Trigger: ATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRASYKGH*CQSGSH
Trigger: GTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCAATGGGGGCCAAGCTaGTCGATGTCCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDQWGPS*SMSSYK
Trigger: TTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACAATGGGGGCCAAGCTaGTCGATGTCCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAQWGPS*SMSSYK
Trigger: TTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCTGTACACACTCAATaGACTTCTGAACCACATGGT +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTAVHTQ*TSEPHG
Trigger: ACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCTGTACACACTCAATaGACTTCTGAACCACATGGT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSAVHTQ*TSEPHG
Trigger: ACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGCATCGATGATAAACTaGAAAGACTGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSASMIN*KDWGCT
Trigger: TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTCCTCAGGACGACCATaGTCCAGTACATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSSGRP*SSTCWI
Trigger: AATCCAACATGTACTGGAGCATGGTCGTCCTGAGGA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTTCCTCAGGACGACCATaGTCCAGTACATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVSSGRP*SSTCWI
Trigger: AATCCAACATGTACTGGAGCATGGTCGTCCTGAGGA...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTCCTCAGGACGACCATaGTCCAGTACATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLSSGRP*SSTCWI
Trigger: AATCCAACATGTACTGGAGCATGGTCGTCCTGAGGA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAWPGCA*HRCTFE
Trigger: TTCGAAAGTACACCTATGGCAAGCACATCCTGGCCA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAAACTTTTTACCTaGCAAGAGCTGCTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLPKLFT*QELLAH
Trigger: ATGGGCGAGCAGCTCTTGCCAGGTAAAAAGTTTTGG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTACTGTCTGCATCCCTTaGGCCAAATCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVTVCIP*AKSSFS
Trigger: AGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAGT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGCACTGGCAAACCATTaGTCTTGTCCATCACATCTC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDALANH*SCPSHL
Trigger: GAGATGTGATGGACAAGACCAATGGTTTGCCAGTGC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAGGGTAGACACCCCATaGCGTGACTCCATAATATTG +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTRVDTP*RDSIIL
Trigger: CAATATTATGGAGTCACGCCATGGGGTGTCTACCCT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGCCACTGCCAGTGTTaGAGTTTGCAACTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISHCQC*SLQLLF
Trigger: GAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGAAAAACTGTGTCCAATaGGGGCCAAGCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGKNCVQ*GPSCSM
Trigger: CATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSWYAA*RISLKT
Trigger: TGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTACATCCACCATAAGTTaGTACGCAGCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVTSTIS*YAAWRI
Trigger: AATCCTCCAGGCTGCGTACCAACTTATGGTGGATGT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAACATCCACCATAAGTTaGTACGCAGCCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTTSTIS*YAAWRI
Trigger: AATCCTCCAGGCTGCGTACCAACTTATGGTGGATGT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISTSRA*PGCACH
Trigger: ATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGSTSRA*PGCACH
Trigger: ATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACT...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAACCATCTCGTTCTGCTaGTCTGAGGGAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTTISFC*SEGINS
Trigger: GGAGTTTATTCCCTCAGACCAGCAGAACGAGATGGT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097864.9
ENSMUST00000105991.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGCACTGTCTCGCCATTaGTCACCCAGGAATATTCCT +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLALSRH*SPRNIP
Trigger: AGGAATATTCCTGGGTGATCAATGGCGAGACAGTGC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR TCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGCAGCTGTCAACTGCTaGACAGCAAGTGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLAAVNC*TASALG
Trigger: ACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTACACTCAATGCACTTCTaGACCACATGGTTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLHSMHF*TTWLPF
Trigger: GAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTG...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATCTGTACGTGAGGCGTaGGTAACACACTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLSVREA*VTHFST
Trigger: TGTGGAGAAGTGTGTTACTCACGCCTCACGTACAGA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGTCCTGCCAAAGCACTaGTTTTCTCTTCAAGACACA +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVVLPKH*FSLQDT
Trigger: TGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGAC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGTCCTGCCAAAGCACTaGTTTTCTCTTCAAGACACA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDVLPKH*FSLQDT
Trigger: TGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGAC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGTCCTGCCAAAGCACTaGTTTTCTCTTCAAGACACA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLVLPKH*FSLQDT
Trigger: TGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGAC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLGVCSS*KSLICS
Trigger: GCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGCATCAATCCCATTCTaGACTGGCAAACCATTGGTC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIASIPF*TGKPLV
Trigger: GACCAATGGTTTGCCAGTGCAGAATGGGATTGATGC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCCACAGGTACCTGCGTaGCTGAATAATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIPQVPA*LNNQTA
Trigger: TGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLCSESC*HRKSWK
Trigger: CTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDCSESC*HRKSWK
Trigger: CTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGCTCTGGGAGTTACTaGTCAGAGAGTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYCSGSY*SESCCH
Trigger: ATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGTGCTCTGGGAGTTACTaGTCAGAGAGTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGCSGSY*SESCCH
Trigger: ATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCA...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSYKGH*CQSGSH
Trigger: GTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCAATGGGGGCCAAGCTaGTCGATGTCCTCTTATAAA +
Preference number: 4 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGQWGPS*SMSSYK
Trigger: TTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTCTGAACCACATGGTTaGCGTTCTGGTCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISEPHG*RSGLSH
Trigger: GTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGCTGTACACACTCAATaGACTTCTGAACCACATGGT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTAVHTQ*TSEPHG
Trigger: ACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGCATCGATGATAAACTaGAAAGACTGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAASMIN*KDWGCT
Trigger: TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCACCTGCCCCTTGAATaGATCGATGATAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDHLPLE*IDDKLQ
Trigger: TTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACACCTGCCCCTTGAATaGATCGATGATAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTHLPLE*IDDKLQ
Trigger: TTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTG...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTCCTCAGGACGACCATaGTCCAGTACATGTTGGATT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSSGRP*SSTCWI
Trigger: AATCCAACATGTACTGGAGCATGGTCGTCCTGAGGA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAACTTCTCCACAACATTaGTTGCAAACTTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTTSPQH*LQTCAD
Trigger: GTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSHVGIS*FLRVMF
Trigger: AAACATCACCCTCAAGAACCAGCTAATCCCAACATG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCCAAAACTTTTTACCTaGCAAGAGCTGCTCGCCCAT +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYPKLFT*QELLAH
Trigger: ATGGGCGAGCAGCTCTTGCCAGGTAAAAAGTTTTGG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAATCCCATTCTGCACTaGCAAACCATTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTNPILH*QTIGLV
Trigger: GACAAGACCAATGGTTTGCCAGTGCAGAATGGGATT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLSKGTL*DSMLEK
Trigger: TTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACA +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLSWYAA*RISLKT
Trigger: TGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSWYAA*RISLKT
Trigger: TGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTCGC +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYEQQVH*VFGIAR
Trigger: GCGAGCTATTCCAAAGACCCAATGCACTTGCTGTTC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105991.9
CDS-3UTR TCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGGGACAGTACAGAATTaGCCTCACTGTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLGTVQN*PHCSHG
Trigger: TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGTCCTGCCAAAGCACTaGTTTTCTCTTCAAGACACA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIVLPKH*FSLQDT
Trigger: TGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGAC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLIHCCS*YKGICL
Trigger: CAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAAT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGAAAATTCCATTATATaGCCAGCAATCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTENSII*PAISRS
Trigger: ACTGCGGGAGATTGCTGGGCATATAATGGAATTTTC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCGAAAATTCCATTATATaGCCAGCAATCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLENSII*PAISRS
Trigger: ACTGCGGGAGATTGCTGGGCATATAATGGAATTTTC...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATCTCTGCTACAATTTTaGTTTTATCCTCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPSLLQF*FYPQDD
Trigger: GTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTCAATACAAGTACATTaGCTCGGATCTCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSSIQVH*LGSLLQ
Trigger: TTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATACTTCTCCACAACATTaGTTGCAAACTTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDTSPQH*LQTCAD
Trigger: GTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAACTTCTCCACAACATTaGTTGCAAACTTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTTSPQH*LQTCAD
Trigger: GTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCACTTCTCCACAACATTaGTTGCAAACTTGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLTSPQH*LQTCAD
Trigger: GTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAHVGIS*FLRVMF
Trigger: AAACATCACCCTCAAGAACCAGCTAATCCCAACATG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACATTGGTCCATCTTTGCTaGATTCATCTGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTLVHLC*IHLFPK
Trigger: TTTGGGAAACAGATGAATCCAGCAAAGATGGACCAA...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATTGGTCCATCTTTGCTaGATTCATCTGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPLVHLC*IHLFPK
Trigger: TTTGGGAAACAGATGAATCCAGCAAAGATGGACCAA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDEQQVH*VFGIAV
Trigger: AACAGCTATTCCAAAGACCCAATGCACTTGCTGTTC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVEQQVH*VFGIAV
Trigger: AACAGCTATTCCAAAGACCCAATGCACTTGCTGTTC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAGGGTAGACACCCCATaGCGTGACTCCATAATATTG +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLRVDTP*RDSIIL
Trigger: CAATATTATGGAGTCACGCCATGGGGTGTCTACCCT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCTTGCAAACTTGTGCTaGCTCAATACAAGTACATTG +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLLANLC*LNTSTL
Trigger: CAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLAYLVF*MNVIPC
Trigger: ACAGGGGATAACATTCATGCAGAACACCAGGTACGC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACCCTTCCAGAGCAAGTaGTTGAAAATCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTPFQSK*LKIMIQ
Trigger: TTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGG...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACCCTTCCAGAGCAAGTaGTTGAAAATCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAPFQSK*LKIMIQ
Trigger: TTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCTTTTGGTCCATCTTTaGTGGATTCATCTGTTTCCC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAILLVHL*WIHLFP
Trigger: GGGAAACAGATGAATCCAGCAAAGATGGACCAAAAG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR GCA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCAAAATCTTTGACGTCTaGATCAATCCCATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLKIFDV*INPILH
Trigger: GTGCAGAATGGGATTGATGCAGACGTCAAAGATTTT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGAAAATTCCATTATATaGCCAGCAATCTCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIENSII*PAISRS
Trigger: ACTGCGGGAGATTGCTGGGCATATAATGGAATTTTC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTTCTGAACCACATGGTTaGCGTTCTGGTCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLSEPHG*RSGLSH
Trigger: GTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGA...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGCATCGATGATAAACTaGAAAGACTGGGGCTGTACA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLASMIN*KDWGCT
Trigger: TGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTCTCTGCTACAATTTTaGTTTTATCCTCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSLLQF*FYPQDD
Trigger: GTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAATTGCCTCGGATCTCTaGTACAATTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPIASDL*YNFAFI
Trigger: GATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAAT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCATTGCCTCGGATCTCTaGTACAATTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSIASDL*YNFAFI
Trigger: GATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAAT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATCAATACAAGTACATTaGCTCGGATCTCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTSIQVH*LGSLLQ
Trigger: TTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTCAATACAAGTACATTaGCTCGGATCTCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDSIQVH*LGSLLQ
Trigger: TTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTTGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAA +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLWPGCA*HRCTFE
Trigger: TTCGAAAGTACACCTATGGCAAGCACATCCTGGCCA...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTTGGTCCATCTTTGCTaGATTCATCTGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDLVHLC*IHLFPK
Trigger: TTTGGGAAACAGATGAATCCAGCAAAGATGGACCAA...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTACTGTCTGCATCCCTTaGGCCAAATCCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLTVCIP*AKSSFS
Trigger: AGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAGT...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAATCCCATTCTGCACTaGCAAACCATTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLNPILH*QTIGLV
Trigger: GACAAGACCAATGGTTTGCCAGTGCAGAATGGGATT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLSWYAA*RISLKT
Trigger: TGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR TCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCTTGCAAACTTGTGCTaGCTCAATACAAGTACATTG +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAILANLC*LNTSTL
Trigger: CAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCCCTTCCAGAGCAAGTaGTTGAAAATCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIPFQSK*LKIMIQ
Trigger: TTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTTCTCTGCTACAATTTTaGTTTTATCCTCAGGACGAC +
Preference number: 4 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAISLLQF*FYPQDD
Trigger: GTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGA...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTATTGCCTCGGATCTCTaGTACAATTTTGCTTTTATC +
Preference number: 4 (lower is better)
Translates to: TLNKACGLPCTLITYVQVIASDL*YNFAFI
Trigger: GATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAAT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTCAATACAAGTACATTaGCTCGGATCTCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: IDTTLNKACGLPCTLITYSIQVH*LGSLLQ
Trigger: TTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTACATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTT +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLHVGIS*FLRVMF
Trigger: AAACATCACCCTCAAGAACCAGCTAATCCCAACATG...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTGTT +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLEQQVH*VFGIAV
Trigger: AACAGCTATTCCAAAGACCCAATGCACTTGCTGTTC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
3UTR CAA 72 bp CTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTaGATCAAACTCCTCCACATTTACATTACAGGTATA +
Preference number: 4 (lower is better)
Translates to: LADSLLTKNVFV*IKLLHIYITGI
Trigger: TATACCTGTAATGTAAATGTGGAGGAGTTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTACCCTTCCAGAGCAAGTaGTTGAAAATCATGATTCAA +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLPFQSK*LKIMIQ
Trigger: TTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGG...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAAAATCTTTGACGTCTaGATCAATCCCATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLKIFDV*INPILH
Trigger: GTGCAGAATGGGATTGATGCAGACGTCAAAGATTTT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR GCA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTAAAATCTTTGACGTCTaGATCAATCCCATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLKIFDV*INPILH
Trigger: GTGCAGAATGGGATTGATGCAGACGTCAAAGATTTT...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCACCAGCTGCTCCGTTaGCTGACGCTGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQHQLLR*LTLQPL
Trigger: CAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CTGGGCCTGCGGAGCGCTCTGCTGAGTAGCAGAGTTTGTAGCTGCTaGAGCTGCAGCTGCCTGCTGCTGGAAGAGACTGGCAGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: LGLRSALLSSRVCSC*SCSCLLLEETGRVD
Trigger: GTCTACCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCTACTCAGCAGAGCGCTCCGCAGGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CTGCTGGGCCTGCGGAGCGCTCTGCTGAGTAGCAGAGTTTGTAGCTaGTGCAGCTGCAGCTGCCTGCTGCTGGAAGAGACTGGCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LLGLRSALLSSRVCS*CSCSCLLLEETGRV
Trigger: TACCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCTACTCAGCAGAGCGCTCCGCAGGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CAAACCCTCCAAGGGCCGATCCCAGGGTGGCACCAAGGGAACTGCTaGTTCCGAATCCCAAGGACGTGTTGGCAGGCTGTGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: QTLQGPIPGWHQGNC*FRIPRTCWQAVQSP
Trigger: AGGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGGAGGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTGGCTGTGGCTGCGCTaGCGACCCTGTTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELWLWLR*RPCSRC
Trigger: ACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: PASQCSHRQPQAASGHAHLALRY*ASAPGA
Trigger: TGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAG...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp TTCCAAACCCTCCAAGGGCCGATCCCAGGGTGGCACCAAGGGAACTaGTGCTTCCGAATCCCAAGGACGTGTTGGCAGGCTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: FQTLQGPIPGWHQGN*CFRIPRTCWQAVQS
Trigger: GCTCTGCACAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGGAGGGTTTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGTGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELWGQRT*ASSSTK
Trigger: CTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCA...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 90 bp CTGCCTGCTGCTGGAAGAGACTGGCAGGGTAGACACCCCATGGCGTaGCTCCATAATATTGGTGAGGGACCACAGCTGGGCCGAGTGTCG +
Preference number: 5 (lower is better)
Translates to: LPAAGRDWQGRHPMA*LHNIGEGPQLGRVS
Trigger: CGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGTCTACCCTGCCAGTCTCTTCCAGCAGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp TGCAACTCCTATGGATCCTGGGACAGGGCTGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGCTGGCTGTGGCTGCGCTTGCGACCC +
Preference number: 5 (lower is better)
Translates to: CNSYGSWDRAGVCSS*KSLICSWLWLRLRP
Trigger: GGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 90 bp GTCCAATGGGGGCCAAGCTGCTCGATGTCCTCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCACGGCGGGAGCCACTGCCAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: VQWGPSCSMSSYKGH*CQSGSHGGSHCQCW
Trigger: CCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTTGGCTGTGGCTGCGCTaGCGACCCTGTTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTWLWLR*RPCSRC
Trigger: ACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCA...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCTCTGGGACTCCATGTaGGAGAAATCCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLWDSM*EKSSTG
Trigger: GCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCTGATGATGTATGGGTaGGGGACAAACGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLMMYG*GTNAAG
Trigger: TCCCGCTGCGTTTGTCCCCAACCCATACATCATCAG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCTCCGAGGCCATTTCTaGCCCCTGCATTCACCACAA +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLRGHF*PLHSPQ
Trigger: TTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGAG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 90 bp ATGGATCCTGGGACAGGGCTGGAGTGTGTTCCAGCTGCAAGAGCCTaGTTTGCAGCTGGCTGTGGCTGCGCTTGCGACCCTGTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: MDPGTGLECVPAARA*FAAGCGCACDPVPD
Trigger: ATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 90 bp CAATGGGGGCCAAGCTGCTCGATGTCCTCTTATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGCGGGAGCCACTGCCAGTGTTGGAGT +
Preference number: 5 (lower is better)
Translates to: QWGPSCSMSSYKGHC*QSGSHGGSHCQCWS
Trigger: ACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp CACCATAGCGTCGTCCTGGGAACGGCCTGCAACTCCTATGGATCCTaGGACAGGGCTGGAGTGTGTTCCAGCTGCAAGAGCCTGATTTGC +
Preference number: 5 (lower is better)
Translates to: HHSVVLGTACNSYGS*DRAGVCSSCKSLIC
Trigger: GCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS-3UTR CAA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCACTGTCTGCATCCCTaGGGCCAAATCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQHCLHP*GQILLF
Trigger: GAAAAGGAGGATTTGGCCCAAGGGATGCAGACAGTG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGCGTGACTCCATAATATaGGTGAGGGACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQRDSII*VRDHSW
Trigger: CCAGCTGTGGTCCCTCACCAATATTATGGAGTCACG...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCGTGACTCCATAATATaGGTGAGGGACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELRDSII*VRDHSW
Trigger: CCAGCTGTGGTCCCTCACCAATATTATGGAGTCACG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 90 bp CTGCTTCCGAATCCCAAGGACGTGTTGGCAGGCTGTGCAGAGCCCTaGGAGAAGAGGGAGCTGCTCTGGGAGTTACTGCTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: LLPNPKDVLAGCAEP*EKRELLWELLLREL
Trigger: CAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTCAGGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CCTCTGAAAGAAGTAGTCCACCATAGCGTCGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGGGACAGGGCTGGAGTGTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLKEVVHHSVVLGTA*NSYGSWDRAGVCSS
Trigger: GCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 90 bp AGTTTGCAACTGCTGTTCCAAACCCTCCAAGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGCTTCCGAATCCCAAGGACGTGTTGG +
Preference number: 5 (lower is better)
Translates to: SLQLLFQTLQGPIPG*HQGNCCFRIPRTCW
Trigger: CCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGGAGGGTTTGGAACAGCAGTTGCAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CCACAGGTACCTGCGTGCCTGAATAATCAAACTGCAGAGGCTCCATaGCCACATGTTCCATGGGGTCCAAGGGGACACTCTGGGACTCCA +
Preference number: 5 (lower is better)
Translates to: PQVPACLNNQTAEAP*PHVPWGPRGHSGTP
Trigger: TGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS GCA 90 bp TATAAAGGTCACTGCTGCCAGTCAGGGAGTCACGGCGGGAGCCACTaGCAGTGTTGGAGTTTGCAACTGCTGTTCCAAACCCTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: YKGHCCQSGSHGGSH*QCWSLQLLFQTLQG
Trigger: CCCTTGGAGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp GACAGGGCTGGAGTGTGTTCCAGCTGCAAGAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGACCCTGTTCCAGATGTCAAAACAAC +
Preference number: 5 (lower is better)
Translates to: DRAGVCSSCKSLICS*LWLRLRPCSRCQNN
Trigger: GTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 90 bp AGGGGACACTCTGGGACTCCATGTTGGAGAAATCCTCCACAGGCTTaGCACCATTGGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCAT +
Preference number: 5 (lower is better)
Translates to: RGHSGTPCWRNPPQA*HHWCWSAGLSPQNH
Trigger: ATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp CCACATGTTCCATGGGGTCCAAGGGGACACTCTGGGACTCCATGTTaGAGAAATCCTCCACAGGCTTGGCACCATTGGTGCTGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: PHVPWGPRGHSGTPC*RNPPQAWHHWCWSA
Trigger: AGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp AGAGGCTCCATGCCCACATGTTCCATGGGGTCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATTG +
Preference number: 5 (lower is better)
Translates to: RGSMPTCSMGSKGTL*DSMLEKSSTGLAPL
Trigger: CAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACGGGGACAGTACAGAATaGACCTCACTGTTCACATGG +
Preference number: 5 (lower is better)
Translates to: PASQCSHRQPQAASGHAHGDSTE*TSLFTW
Trigger: CCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCC...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELKGICL*SLLVLI
Trigger: AATCAGAACCAGCAGGGACAACAAACAGATCCCCTT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTACCTGCAGCCAATCCTaGTCCAAAGGCAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTTCSQS*SKGKSR
Trigger: TCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGT...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGCTCCCAGGTTTAAGCTaGAAGAGGATCCATGTGAAG +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELLPGLS*KRIHVK
Trigger: CTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAG...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp GGGACTCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGCCCTCAGAACCATTCTGGTTTGGAC +
Preference number: 5 (lower is better)
Translates to: GTPCWRNPPQAWHHW*WSAGLSPQNHSGLD
Trigger: GTCCAAACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp GCTGGAGTGTGTTCCAGCTGCAAGAGCCTGATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGTTCCAGATGTCAAAACAACAGGCAT +
Preference number: 5 (lower is better)
Translates to: AGVCSSCKSLICSWL*LRLRPCSRCQNNRH
Trigger: ATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS TCA 90 bp AAGTCCCACAGTTGCTGCTGCAGAGTCCACAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGGCTCCATGCCCACATGTTCCATGGG +
Preference number: 5 (lower is better)
Translates to: KSHSCCCRVHRYLRA*IIKLQRLHAHMFHG
Trigger: CCCATGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp TTGGAGAAATCCTCCACAGGCTTGGCACCATTGGTGCTGGTCAGCTaGGCTAAGCCCTCAGAACCATTCTGGTTTGGACCCAGAAGATCC +
Preference number: 5 (lower is better)
Translates to: LEKSSTGLAPLVLVS*AKPSEPFWFGPRRS
Trigger: GGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp ACTCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCTCAGAACCATTCTGGTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: TPCWRNPPQAWHHWC*SAGLSPQNHSGLDP
Trigger: TGGGTCCAAACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 90 bp TCTGGGACTCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCATTCTGGTTTG +
Preference number: 5 (lower is better)
Translates to: SGTPCWRNPPQAWHH*CWSAGLSPQNHSGL
Trigger: CAAACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACCTCAATACAAGTACATaGCCTCGGATCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: PASQCSHRQPQAASGHAHLNTST*PRISAT
Trigger: TGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAG...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 90 bp AGGTGTACTTTCGAAGCGTCGCAATGTGTGGCCGGATCTTGTGCATaGCAATCTTCCGCTGACCCGGCTCAGCCACATCGATCATCTTCT +
Preference number: 5 (lower is better)
Translates to: RCTFEASQCVAGSCA*QSSADPAQPHRSSS
Trigger: AGAAGATGATCGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAAAGTACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp TGGGCCCCAAGTCCACGCCATTCTTCATGTAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCATAGGTGTACTTTCGAAGCGTCGCAA +
Preference number: 5 (lower is better)
Translates to: WAPSPRHSSCSTSRA*PGCACHRCTFEASQ
Trigger: TTGCGACGCTTCGAAAGTACACCTATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCGTGGACTTGGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQKLGYR*FRKSSR
Trigger: TCTGGAAGATTTTCGAAACAACCGGTACCCTAATTT...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELKLGYR*FRKSSR
Trigger: TCTGGAAGATTTTCGAAACAACCGGTACCCTAATTT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TTGGAGGAGGGAGCAATCCCGGAGCAACCGTTGCCCACTTCCGACGCTGAGCTGATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGA +
Preference number: 5 (lower is better)
Translates to: LEEGAIPEQPLPTSDAELISATI*LLSSGR
Trigger: TCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGAT...CAGCTCAGCGTCGGAAGTGGGCAACGGTTGCTCCGGGATTGCTCCCTCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGGGTCAGATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGA +
Preference number: 5 (lower is better)
Translates to: LPTLSWAPLVAGWICQGQISATI*LLSSGR
Trigger: TCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGAT...CTGACCCTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GGTGGCGCTGAGCAGGGAGGGGGCAGGCGAAACTTCTGCACATCCTTTTTGACTCTCAATACAAGTACATaGCCTCGGATCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: GGAEQGGGRRNFCTSFLTLNTST*PRISAT
Trigger: TGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAG...AGTCAAAAAGGATGTGCAGAAGTTTCGCCTGCCCCCTCCCTGCTCAGCGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CAAAAAGTCCCACAGTTGCTGCTGCAGAGTCCACAGGTACCTGCGTaGCTGAATAATCAAACTGCAGAGGCTCCATGCCCACATGTTCCA +
Preference number: 5 (lower is better)
Translates to: QKVPQLLLQSPQVPA*LNNQTAEAPCPHVP
Trigger: TGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS GCA 90 bp ACCTGCAGCCAATCCTTGTCCAAAGGCAAGAGCAGAATTCACTGCTaGAGCTGCTACAAGGGGATCTGTTTGTTGTCCCTGCTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TCSQSLSKGKSRIHC*SCYKGICLLSLLVL
Trigger: CAGAACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp TGCATTCACCACAAGGGCACCAGTTTGGTCATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGGCATACCTGCAGCCAATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: CIHHKGTSLVIVSSR*QDWITWHTCSQSLS
Trigger: GGACAAGGATTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTGGTGAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp GAGAGAAGAGGGAGCTGCTCTGGGAGTTACTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAGCCAGATTGTTACTGGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: ERRGSCSGSYCSESC*HRKSWKPDCYWAAA
Trigger: AGCAGCAGCCCAGTAACAATCTGGCTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp TGGATCACCCTACAGCCGTACGGGTGCGTAGACAAAGCAAACACCTaGCCCTTGAATGCATCGATGATAAACTGCAAAGACTGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WITLQPYGCVDKANT*PLNASMINCKDWGC
Trigger: ACAGCCCCAGTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGGTGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp AGACAGTGCTCTAGGATCCTCTGGATCACCCTACAGCCGTACGGGTaGGTAGACAAAGCAAACACCTGCCCCTTGAATGCATCGATGATA +
Preference number: 5 (lower is better)
Translates to: RQCSRILWITLQPYG*VDKANTCPLNASMI
Trigger: TATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGGTGATCCAGAGGATCCTAGAGCACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CGCCATTCTTCATGTAGTACTTCTCGAGCTTGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAAGCGTCGCAATGTGTGGCCGGATCT +
Preference number: 5 (lower is better)
Translates to: RHSSCSTSRAWPGCA*HRCTFEASQCVAGS
Trigger: AGATCCGGCCACACATTGCGACGCTTCGAAAGTACACCTATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp TGCCTGAATAATCAAACTGCAGAGGCTCCATGCCCACATGTTCCATaGGGTCCAAGGGGACACTCTGGGACTCCATGTTGGAGAAATCCT +
Preference number: 5 (lower is better)
Translates to: CLNNQTAEAPCPHVP*GPRGHSGTPCWRNP
Trigger: AGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TGCCCACTTCCGACGCTGAGCTGGGCACCTCTGGTTGCTGGTTGGATCTGCCAGTTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCT +
Preference number: 5 (lower is better)
Translates to: CPLPTLSWAPLVAGWICQFFFSP*SFSSLS
Trigger: AGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAA...CTGGCAGATCCAACCAGCAACCAGAGGTGCCCAGCTCAGCGTCGGAAGTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAAAATCCCAAGGACGTGTaGGCAGGCTGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKNPKDV*AGCAEP
Trigger: GGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATT...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CCTGCTTCCCAGTGTTCACACAGGCAACCACAGGCAGCAAGTGGCCATGCCCACATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGA +
Preference number: 5 (lower is better)
Translates to: PASQCSHRQPQAASGHAHISATI*LLSSGR
Trigger: TCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGAT...GTGGGCATGGCCACTTGCTGCCTGTGGTTGCCTGTGTGAACACTGGGAAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp CCAGGGGTACGGCTAAAATCTTTGACGTCTGCATCAATCCCATTCTaGACTGGCAAACCATTGGTCTTGTCCATCACATCTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PGVRLKSLTSASIPF*TGKPLVLSITSPSS
Trigger: GGAGGAGGGAGATGTGATGGACAAGACCAATGGTTTGCCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGCCGTACCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS GCA 90 bp CATACCTGCAGCCAATCCTTGTCCAAAGGCAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGGATCTGTTTGTTGTCCCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HTCSQSLSKGKSRIH*CSCYKGICLLSLLV
Trigger: AACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 90 bp GGAATAAACTCCAAAGCTTTCTGGATGACTCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACATGGCCTCGAATCCGTTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GINSKAFWMTRQPYI*SANDRTWPRIRSAR
Trigger: TCTGGCTGAACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGGAGTTTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp CGACCCTGTTCCAGATGTCAAAACAACAGGCATGTTGGGATTAGCTaGTTCTTGAGGGTGATGTTTCAGGTGGGGGCTGAAAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RPCSRCQNNRHVGIS*FLRVMFQVGAERVL
Trigger: CAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGGCAAACCATTGGTCTaGTCCATCACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: NTICYDHKRWDIQSARAGGKPLV*SITSPS
Trigger: GGAGGGAGATGTGATGGACAAGACCAATGGTTTGCC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCCGTGACTCCATAATATaGGTGAGGGACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: NTICYDHKRWDIQSARAGRDSII*VRDHSW
Trigger: CCAGCTGTGGTCCCTCACCAATATTATGGAGTCACG...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAATGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKWGQRT*ASSSTK
Trigger: CTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCA...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACACCAGCTGCTCCGTTaGCTGACGCTGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAHQLLR*LTLQPL
Trigger: CAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTLALRY*ASAPGA
Trigger: TGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCCACATCCACCATAAGTaGGTACGCAGCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: NTICYDHKRWDIQSARAGHIHHK*VRSLED
Trigger: ATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTG...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 90 bp CCTCACTGTTCACATGGAAACTCTGACCAGGTCTTCTCTGCACCATaGTTGGCTGGGAAACTGAATGATCTGATGTTCCCCAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PHCSHGNSDQVFSAP*LAGKLNDLMFPRHC
Trigger: ACAGTGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCCAATCATGGTGCAGAGAAGACCTGGTCAGAGTTTCCATGTGAACAGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS GCA 90 bp AGCCAATCCTTGTCCAAAGGCAAGAGCAGAATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTGTTGTCCCTGCTGGTTCTGATTTGG +
Preference number: 5 (lower is better)
Translates to: SQSLSKGKSRIHCCS*YKGICLLSLLVLIW
Trigger: CCAAATCAGAACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 90 bp ACCATCTCGTTCTGCTGGTCTGAGGGAATAAACTCCAAAGCTTTCTaGATGACTCGGCAGCCGTACATCTGCAGTGCCAATGATAGGACA +
Preference number: 5 (lower is better)
Translates to: TISFCWSEGINSKAF*MTRQPYICSANDRT
Trigger: TGTCCTATCATTGGCACTGCAGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGGAGTTTATTCCCTCAGACCAGCAGAACGAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097864.9
ENSMUST00000105991.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCACCAGCTGCTCCGTTaGCTGACGCTGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYHQLLR*LTLQPL
Trigger: CAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAAATCCCAAGGACGTGTaGGCAGGCTGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTNPKDV*AGCAEP
Trigger: GGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATT...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLLALRY*ASAPGA
Trigger: TGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVLALRY*ASAPGA
Trigger: TGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACATGGCTGTGGCTGCGCTaGCGACCCTGTTCCAGATGT +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTWLWLR*RPCSRC
Trigger: ACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCA...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACATGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTWGQRT*ASSSTK
Trigger: CTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCA...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAATCCCAAGGACGTGTaGGCAGGCTGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVNPKDV*AGCAEP
Trigger: GGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAATCCCAAGGACGTGTaGGCAGGCTGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDNPKDV*AGCAEP
Trigger: GGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGLALRY*ASAPGA
Trigger: TGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGGCTGGAGGCACTGCTaGCACTGCGGTACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVGWRHC*HCGTWL
Trigger: AAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGGCTGGAGGCACTGCTaGCACTGCGGTACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAGWRHC*HCGTWL
Trigger: AAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCGCAAACACCTGCCCCTaGAATGCATCGATGATAAAC +
Preference number: 5 (lower is better)
Translates to: NTICYDHKRWDIQSARAGANTCP*NASMIN
Trigger: GTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAAATCCTCCACAGGCTaGGCACCATTGGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPKSSTG*APLVLV
Trigger: GACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAWGQRT*ASSSTK
Trigger: CTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCTCCGAGGCCATTTCTaGCCCCTGCATTCACCACAA +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSLRGHF*PLHSPQ
Trigger: TTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGAG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTCACCAGCTGCTCCGTTaGCTGACGCTGCAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLHQLLR*LTLQPL
Trigger: CAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTG...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAATCCCAAGGACGTGTaGGCAGGCTGTGCAGAGCCC +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAINPKDV*AGCAEP
Trigger: GGGCTCTGCACAGCCTGCCAACACGTCCTTGGGATT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGGCTGGAGGCACTGCTaGCACTGCGGTACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIGWRHC*HCGTWL
Trigger: AAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGGCTGGAGGCACTGCTaGCACTGCGGTACTTGGCTT +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGGWRHC*HCGTWL
Trigger: AAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AACACTATCTGCTACGACCATAAAAGGTGGGATATACAGAGTGCACGGGCTGGCCCAGGAATATTCCTTTaGGTCCATCTTTGCTGGATT +
Preference number: 5 (lower is better)
Translates to: NTICYDHKRWDIQSARAGPGIFL*VHLCWI
Trigger: AATCCAGCAAAGATGGACCAAAAGGAATATTCCTGG...GCCAGCCCGTGCACTCTGTATATCCCACCTTTTATGGTCGTAGCAGATAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACACTGTCTGCATCCCTaGGGCCAAATCCTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTHCLHP*GQILLF
Trigger: GAAAAGGAGGATTTGGCCCAAGGGATGCAGACAGTG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGGCAAACCATTGGTCTaGTCCATCACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTGKPLV*SITSPS
Trigger: GGAGGGAGATGTGATGGACAAGACCAATGGTTTGCC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAAAATCCTCCACAGGCTaGGCACCATTGGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAKSSTG*APLVLV
Trigger: GACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTT...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTAAATCCTCCACAGGCTaGGCACCATTGGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVKSSTG*APLVLV
Trigger: GACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCTCTGGGACTCCATGTaGGAGAAATCCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLLWDSM*EKSSTG
Trigger: GCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACAAAAAGTCCCACAGTaGCTGCTGCAGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPQKVPQ*LLQSPQ
Trigger: CTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTTG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCTGATGATGTATGGGTaGGGGACAAACGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVLMMYG*GTNAAG
Trigger: TCCCGCTGCGTTTGTCCCCAACCCATACATCATCAG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACTGATGATGTATGGGTaGGGGACAAACGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRALMMYG*GTNAAG
Trigger: TCCCGCTGCGTTTGTCCCCAACCCATACATCATCAG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTHKGTS*VIVSSR
Trigger: CCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPHKGTS*VIVSSR
Trigger: CCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACTCCGAGGCCATTTCTaGCCCCTGCATTCACCACAA +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRALRGHF*PLHSPQ
Trigger: TTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGAG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTCCGAGGCCATTTCTaGCCCCTGCATTCACCACAA +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTLRGHF*PLHSPQ
Trigger: TTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGAG...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCGAGCCACTGCCAGTGTaGGAGTTTGCAACTGCTGTT +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSEPLPV*EFATAV
Trigger: AACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTC...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACACATCCACCATAAGTaGGTACGCAGCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTHIHHK*VRSLED
Trigger: ATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACACATCCACCATAAGTaGGTACGCAGCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPHIHHK*VRSLED
Trigger: ATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGGCACTGTCTCGCCATaGATCACCCAGGAATATTCC +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAGTVSP*ITQEYS
Trigger: GGAATATTCCTGGGTGATCAATGGCGAGACAGTGCC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGGCAAACCATTGGTCTaGTCCATCACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVGKPLV*SITSPS
Trigger: GGAGGGAGATGTGATGGACAAGACCAATGGTTTGCC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGGCAAACCATTGGTCTaGTCCATCACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTGKPLV*SITSPS
Trigger: GGAGGGAGATGTGATGGACAAGACCAATGGTTTGCC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATAAATCCTCCACAGGCTaGGCACCATTGGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYKSSTG*APLVLV
Trigger: GACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCTCTGGGACTCCATGTaGGAGAAATCCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAILWDSM*EKSSTG
Trigger: GCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATCAAAAAGTCCCACAGTaGCTGCTGCAGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDQKVPQ*LLQSPQ
Trigger: CTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTTG...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCAAAAAGTCCCACAGTaGCTGCTGCAGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLQKVPQ*LLQSPQ
Trigger: CTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTTG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCTGATGATGTATGGGTaGGGGACAAACGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYLMMYG*GTNAAG
Trigger: TCCCGCTGCGTTTGTCCCCAACCCATACATCATCAG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCTGATGATGTATGGGTaGGGGACAAACGCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAILMMYG*GTNAAG
Trigger: TCCCGCTGCGTTTGTCCCCAACCCATACATCATCAG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCGTGACTCCATAATATaGGTGAGGGACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVRDSII*VRDHSW
Trigger: CCAGCTGTGGTCCCTCACCAATATTATGGAGTCACG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTACCTGCAGCCAATCCTaGTCCAAAGGCAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVTCSQS*SKGKSR
Trigger: TCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCACCTGCAGCCAATCCTaGTCCAAAGGCAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLTCSQS*SKGKSR
Trigger: TCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGT...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTHKGTS*VIVSSR
Trigger: CCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAHKGTS*VIVSSR
Trigger: CCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGCCAGTGTTGGAGTTaGCAACTGCTGTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPCQCWS*QLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCA...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAGAGCCACTGCCAGTGTaGGAGTTTGCAACTGCTGTT +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAEPLPV*EFATAV
Trigger: AACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTC...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTGAGCCACTGCCAGTGTaGGAGTTTGCAACTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVEPLPV*EFATAV
Trigger: AACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTC...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCACATCCACCATAAGTaGGTACGCAGCCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVHIHHK*VRSLED
Trigger: ATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTG...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGCACGGGCTGGCTGATTCTCTTCTTACCAAAAACGTGTTCGTGTTGATCAAACTCAATACAAGTACATaGCCTCGGATCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: VHGLADSLLTKNVFVLIKLNTST*PRISAT
Trigger: TGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAG...TTTGATCAACACGAACACGTTTTTGGTAAGAAGAGAATCAGCCAGCCCGTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGGCACTGTCTCGCCATaGATCACCCAGGAATATTCC +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYGTVSP*ITQEYS
Trigger: GGAATATTCCTGGGTGATCAATGGCGAGACAGTGCC...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATGGGGACAGTACAGAATaGACCTCACTGTTCACATGG +
Preference number: 5 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDGDSTE*TSLFTW
Trigger: CCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCC...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCAAAAAGTCCCACAGTaGCTGCTGCAGAGTCCACAG +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGQKVPQ*LLQSPQ
Trigger: CTGTGGACTCTGCAGCAGCAACTGTGGGACTTTTTG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCGTGACTCCATAATATaGGTGAGGGACCACAGCTGG +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGRDSII*VRDHSW
Trigger: CCAGCTGTGGTCCCTCACCAATATTATGGAGTCACG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSKGICL*SLLVLI
Trigger: AATCAGAACCAGCAGGGACAACAAACAGATCCCCTT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPKGICL*SLLVLI
Trigger: AATCAGAACCAGCAGGGACAACAAACAGATCCCCTT...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTACCTGCAGCCAATCCTaGTCCAAAGGCAAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAITCSQS*SKGKSR
Trigger: TCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGT...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGHKGTS*VIVSSR
Trigger: CCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATGCCAGTGTTGGAGTTaGCAACTGCTGTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRACQCWS*QLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCTGCCAGTGTTGGAGTTaGCAACTGCTGTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLCQCWS*QLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCA...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACACTCCCAGGTTTAAGCTaGAAGAGGATCCATGTGAAG +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTLPGLS*KRIHVK
Trigger: CTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAG...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTATACAGCAAACACCTGCCCCTaGAATGCATCGATGATAAAC +
Preference number: 5 (lower is better)
Translates to: QSMWPPMYTDYLCTSSYTANTCP*NASMIN
Trigger: GTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC...TGTATAGGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGCAAACACCTGCCCCTaGAATGCATCGATGATAAAC +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPANTCP*NASMIN
Trigger: GTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCAGTACGGCTAAAATCTTaGACGTCTGCATCAATCCCA +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPVRLKS*TSASIP
Trigger: TGGGATTGATGCAGACGTCAAAGATTTTAGCCGTAC...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTKGICL*SLLVLI
Trigger: AATCAGAACCAGCAGGGACAACAAACAGATCCCCTT...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATTGCCAGTGTTGGAGTTaGCAACTGCTGTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYCQCWS*QLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCA...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACTCCCAGGTTTAAGCTaGAAGAGGATCCATGTGAAG +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRALPGLS*KRIHVK
Trigger: CTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GAAAGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCTCCCAGGTTTAAGCTaGAAGAGGATCCATGTGAAG +
Preference number: 5 (lower is better)
Translates to: ESVHMWNIDTTLNKACGLLPGLS*KRIHVK
Trigger: CTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAG...GAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCCTCAATACAAGTACATaGCCTCGGATCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSLNTST*PRISAT
Trigger: TGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAG...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCAGGAATATTCCTTTaGGTCCATCTTTGCTGGATT +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPGIFL*VHLCWI
Trigger: AATCCAGCAAAGATGGACCAAAAGGAATATTCCTGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS-3UTR CAA 90 bp AGTGTCCACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCACCATCAAACGTACCCTaGTTCTTCTTTTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: SVHMWNIDTTLNKACGLPPSNVP*FFFSPL
Trigger: CAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGG...TGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp CACATGTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACAGTACGGCTAAAATCTTaGACGTCTGCATCAATCCCA +
Preference number: 5 (lower is better)
Translates to: HMWNIDTTLNKACGLPCTVRLKS*TSASIP
Trigger: TGGGATTGATGCAGACGTCAAAGATTTTAGCCGTAC...TGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTATGCCAGTGTTGGAGTTaGCAACTGCTGTTCCAAACC +
Preference number: 5 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLCQCWS*QLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCA...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TGTAGTGTTACAGTCTATATTCAAACGAGGGTTGACAGTATGTTACATTCACTTGAGCCACTGCCAGTGTaGGAGTTTGCAACTGCTGTT +
Preference number: 5 (lower is better)
Translates to: CSVTVYIQTRVDSMLHSLEPLPV*EFATAV
Trigger: AACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTC...AAGTGAATGTAACATACTGTCAACCCTCGTTTGAATATAGACTGTAACACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGCTCCCAGGTTTAAGCTaGAAGAGGATCCATGTGAAG +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGLPGLS*KRIHVK
Trigger: CTTCACATGGATCCTCTTCAAGCTTAAACCTGGGAG...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGGCAAACACCTGCCCCTaGAATGCATCGATGATAAAC +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGANTCP*NASMIN
Trigger: GTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCACTCAATACAAGTACATaGCCTCGGATCTCTGCTACA +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRALNTST*PRISAT
Trigger: TGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAG...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTGTACGGCTAAAATCTTaGACGTCTGCATCAATCCCA +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIVRLKS*TSASIP
Trigger: TGGGATTGATGCAGACGTCAAAGATTTTAGCCGTAC...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATT +
Preference number: 5 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLKGICL*SLLVLI
Trigger: AATCAGAACCAGCAGGGACAACAAACAGATCCCCTT...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTAGTCAATTAGCAAACACCTGCCCCTaGAATGCATCGATGATAAAC +
Preference number: 5 (lower is better)
Translates to: YLCTSSYTPVNSRAISQLANTCP*NASMIN
Trigger: GTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC...TAATTGACTAATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGA +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSISATI*LLSSGR
Trigger: TCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGAT...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTCCTTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCT +
Preference number: 5 (lower is better)
Translates to: IEQSMWPPMYTDYLCTSSFFFSP*SFSSLS
Trigger: AGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAA...GGAACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATCCATCAAACGTACCCTaGTTCTTCTTTTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYPSNVP*FFFSPL
Trigger: CAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGG...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp TACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCAATTCCATCAAACGTACCCTaGTTCTTCTTTTCACCTTTG +
Preference number: 5 (lower is better)
Translates to: YTDYLCTSSYTPVNSRAIPSNVP*FFFSPL
Trigger: CAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGG...AATTGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp GTGGAATATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VEYRYNIEQSMWPPMYTDKLGYR*FRKSSR
Trigger: TCTGGAAGATTTTCGAAACAACCGGTACCCTAATTT...ATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTATATTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATGTACAAGTTATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGA +
Preference number: 5 (lower is better)
Translates to: TLNKACGLPCTLITYVQVISATI*LLSSGR
Trigger: TCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGAT...AACTTGTACATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATGTACACTGATTACCTATGTACAAGTTCCTATACACCAGTAAACAGCAGGGCATTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCT +
Preference number: 5 (lower is better)
Translates to: MYTDYLCTSSYTPVNSRAFFFSP*SFSSLS
Trigger: AGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAA...TGCCCTGCTGTTTACTGGTGTATAGGAACTTGTACATAGGTAATCAGTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATAGATACAACATTGAACAAAGCATGTGGCCTCCCATGTACACTGATTACCTATAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: IDTTLNKACGLPCTLITYKLGYR*FRKSSR
Trigger: TCTGGAAGATTTTCGAAACAACCGGTACCCTAATTT...ATAGGTAATCAGTGTACATGGGAGGCCACATGCTTTGTTCAATGTTGTATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS-3UTR CAA 90 bp ATATGCAAAGTCTACACAAGTATACACTATGTATCTATAGAAGCCAGACCAGGGTTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCT +
Preference number: 5 (lower is better)
Translates to: ICKVYTSIHYVSIEARPGFFFSP*SFSSLS
Trigger: AGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAA...CCCTGGTCTGGCTTCTATAGATACATAGTGTATACTTGTGTAGACTTTGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030315.13
ENSMUST00000105992.9
CDS GCA 72 bp GGTGCTGCTGGGGCTGAAAAGGCTGGAGGCACTGCTTaGACTGCGGTACTTGGCTTCGGCACCGGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GAAGAEKAGGTA*TAVLGFGTGSS
Trigger: GCTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp CTGCTGGGGCTGAAAAGGCTGGAGGCACTGCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCAGCAGAGATGTATCTTCCACTGCCG +
Preference number: 6 (lower is better)
Translates to: LLGLKRLEALLALRY*ASAPGAAEMYLPLP
Trigger: CGGCAGTGGAAGATACATCTCTGCTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAGCCCCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp GGGCCAAGCTGCTCGATGTCCTCTTATAAAGGTCACTaGTGCCAGTCAGGGAGTCACGGCGGGAGCCACTGC +
Preference number: 6 (lower is better)
Translates to: GPSCSMSSYKGH*CQSGSHGGSHC
Trigger: GCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp GTCGTCCTGGGAACGGCCTGCAACTCCTATGGATCCTaGGACAGGGCTGGAGTGTGTTCCAGCTGCAAGAGC +
Preference number: 6 (lower is better)
Translates to: VVLGTACNSYGS*DRAGVCSSCKS
Trigger: GCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 72 bp CTGCTGTTCCAAACCCTCCAAGGGCCGATCCCAGGGTaGCACCAAGGGAACTGCTGCTTCCGAATCCCAAGG +
Preference number: 6 (lower is better)
Translates to: LLFQTLQGPIPG*HQGNCCFRIPR
Trigger: CCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGGAGGGTTTGGAACAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp TCCGTCCCTGGGGGAGCAGCGCTGATGATGTATGGGTaGGGGACAAACGCAGCGGGAGCTAAACCTGCGATG +
Preference number: 6 (lower is better)
Translates to: SVPGGAALMMYG*GTNAAGAKPAM
Trigger: CATCGCAGGTTTAGCTCCCGCTGCGTTTGTCCCCAACCCATACATCATCAGCGCTGCTCCCCCAGGGACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030315.13
CDS CAA 72 bp GGCAGGGTAGACACCCCATGGCGTGACTCCATAATATaGGTGAGGGACCACAGCTGGGCCGAGTGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: GRVDTPWRDSII*VRDHSWAECRC
Trigger: GCAGCGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGTCTACCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 72 bp AAAGAGCTGGAAGCCAGATTGTTACTGGGCTGCTGCTaGGGCTGGGGCTGGGGCTGCTGGGTGCCTAAAGGT +
Preference number: 6 (lower is better)
Translates to: KELEARLLLGCC*GWGWGCWVPKG
Trigger: ACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTTCCAGCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp TATGGATCCTGGGACAGGGCTGGAGTGTGTTCCAGCTaGAAGAGCCTGATTTGCAGCTGGCTGTGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: YGSWDRAGVCSS*KSLICSWLWLR
Trigger: GCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 72 bp GAAGTAGTCCACCATAGCGTCGTCCTGGGAACGGCCTaGAACTCCTATGGATCCTGGGACAGGGCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: EVVHHSVVLGTA*NSYGSWDRAGV
Trigger: CACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 72 bp CACTGCTGCCAGTCAGGGAGTCACGGCGGGAGCCACTaGCAGTGTTGGAGTTTGCAACTGCTGTTCCAAACC +
Preference number: 6 (lower is better)
Translates to: HCCQSGSHGGSH*QCWSLQLLFQT
Trigger: GGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp CCAAGCTGCTCGATGTCCTCTTATAAAGGTCACTGCTaGCAGTCAGGGAGTCACGGCGGGAGCCACTGCCAG +
Preference number: 6 (lower is better)
Translates to: PSCSMSSYKGHC*QSGSHGGSHCQ
Trigger: CTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp TGTTGCCATAGAAAGAGCTGGAAGCCAGATTGTTACTaGGCTGCTGCTGAGGCTGGGGCTGGGGCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: CCHRKSWKPDCY*AAAEAGAGAAG
Trigger: CCCAGCAGCCCCAGCCCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTTCCAGCTCTTTCTATGGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp CAGTCAGGGAGTCACGGCGGGAGCCACTGCCAGTGTTaGAGTTTGCAACTGCTGTTCCAAACCCTCCAAGGG +
Preference number: 6 (lower is better)
Translates to: QSGSHGGSHCQC*SLQLLFQTLQG
Trigger: CCCTTGGAGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp CCAGTCAGGGAGTCACGGCGGGAGCCACTGCCAGTGTaGGAGTTTGCAACTGCTGTTCCAAACCCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: PVRESRREPLPV*EFATAVPNPPR
Trigger: CCTTGGAGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp ATCCTGGGACAGGGCTGGAGTGTGTTCCAGCTGCAAGAGCCTGATTaGCAGCTGGCTGTGGCTGCGCTTGCGACCCTGTTCCAGATGTCA +
Preference number: 6 (lower is better)
Translates to: ILGQGWSVFQLQEPD*QLAVAALATLFQMS
Trigger: TGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CAA 90 bp GAAGAGACTGGCAGGGTAGACACCCCATGGCGTGACTCCATAATATaGGTGAGGGACCACAGCTGGGCCGAGTGTCGCTGCTGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: EETGRVDTPWRDSII*VRDHSWAECRCCSQ
Trigger: TTGGCTGCAGCAGCGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGTCTACCCTGCCAGTCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp CCCACATGTTCCATGGGGTCCAAGGGGACACTCTGGGACTCCATGTaGGAGAAATCCTCCACAGGCTTGGCACCATTGGTGCTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PTCSMGSKGTLWDSM*EKSSTGLAPLVLVS
Trigger: GCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS TCA 72 bp GCTGGAAGAGACTGGCAGGGTAGACACCCCATGGCGTaGCTCCATAATATTGGTGAGGGACCACAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: AGRDWQGRHPMA*LHNIGEGPQLG
Trigger: GCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGTCTACCCTGCCAGTCTCTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp GGAGTGTGTTCCAGCTGCAAGAGCCTGATTTGCAGCTaGCTGTGGCTGCGCTTGCGACCCTGTTCCAGATGT +
Preference number: 6 (lower is better)
Translates to: GVCSSCKSLICS*LWLRLRPCSRC
Trigger: ACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 72 bp GCTAATGATGACTGGGGCTGGAGCAACAAGCCGGACTaGAGCTCCGAGGCCATTTCTTGCCCCTGCATTCAC +
Preference number: 6 (lower is better)
Translates to: ANDDWGWSNKPD*SSEAISCPCIH
Trigger: GTGAATGCAGGGGCAAGAAATGGCCTCGGAGCTCCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp AAGGGGACACTCTGGGACTCCATGTTGGAGAAATCCTCCACAGGCTaGGCACCATTGGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCA +
Preference number: 6 (lower is better)
Translates to: KGTLWDSMLEKSSTG*APLVLVSWAKPSEP
Trigger: TGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS TCA 72 bp TTCGAAGCGTCGCAATGTGTGGCCGGATCTTGTGCATaGCAATCTTCCGCTGACCCGGCTCAGCCACATCGA +
Preference number: 6 (lower is better)
Translates to: FEASQCVAGSCA*QSSADPAQPHR
Trigger: TCGATGTGGCTGAGCCGGGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp AACGGCCTGCAACTCCTATGGATCCTGGGACAGGGCTaGAGTGTGTTCCAGCTGCAAGAGCCTGATTTGCAG +
Preference number: 6 (lower is better)
Translates to: NGLQLLWILGQG*SVFQLQEPDLQ
Trigger: CTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 72 bp CGGCAGCCGTACATCTGCAGTGCCAATGATAGGACATaGCCTCGAATCCGTTCAGCCAGAGCCAGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: RQPYICSANDRT*PRIRSARASFC
Trigger: ACAGAAGCTGGCTCTGGCTGAACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGTACGGCTGCCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp AGGGTCTGGTCAGGGAGACAGTGCTCTAGGATCCTCTaGATCACCCTACAGCCGTACGGGTGCGTAGACAAA +
Preference number: 6 (lower is better)
Translates to: RVWSGRQCSRIL*ITLQPYGCVDK
Trigger: TTTGTCTACGCACCCGTACGGCTGTAGGGTGATCCAGAGGATCCTAGAGCACTGTCTCCCTGACCAGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp TCCATGGGGTCCAAGGGGACACTCTGGGACTCCATGTaGGAGAAATCCTCCACAGGCTTGGCACCATTGGTG +
Preference number: 6 (lower is better)
Translates to: SMGSKGTLWDSM*EKSSTGLAPLV
Trigger: CACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CAA 72 bp CTGAAAAGGCTGGAGGCACTGCTTGCACTGCGGTACTaGGCTTCGGCACCGGGAGCAGCAGAGATGTATCTT +
Preference number: 6 (lower is better)
Translates to: LKRLEALLALRY*ASAPGAAEMYL
Trigger: AAGATACATCTCTGCTGCTCCCGGTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp ATCTGTTTGTTGTCCCTGCTGGTTCTGATTTGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAGAACCTGCTGCTGTCCCTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: ICLLSLLVLIWGQRT*ASSSTKNLLLSLLG
Trigger: GCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACAACAAACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS TCA 72 bp GTCCCCCACTCTCCGACCGTGGGGACAGTACAGAATTaGCCTCACTGTTCACATGGAAACTCTGACCAGGTC +
Preference number: 6 (lower is better)
Translates to: VPHSPTVGTVQN*PHCSHGNSDQV
Trigger: GACCTGGTCAGAGTTTCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCCACGGTCGGAGAGTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS GCA 72 bp CCTGCGTGCCTGAATAATCAAACTGCAGAGGCTCCATaGCCACATGTTCCATGGGGTCCAAGGGGACACTCT +
Preference number: 6 (lower is better)
Translates to: PACLNNQTAEAP*PHVPWGPRGHS
Trigger: AGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCACGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp TGTTCCAGCTGCAAGAGCCTGATTTGCAGCTGGCTGTaGCTGCGCTTGCGACCCTGTTCCAGATGTCAAAAC +
Preference number: 6 (lower is better)
Translates to: CSSCKSLICSWL*LRLRPCSRCQN
Trigger: GTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CCA 72 bp TGGAGAAATCCTCCACAGGCTTGGCACCATTGGTGCTaGTCAGCTGGGCTAAGCCCTCAGAACCATTCTGGT +
Preference number: 6 (lower is better)
Translates to: WRNPPQAWHHWC*SAGLSPQNHSG
Trigger: ACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp CCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATTaGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCAT +
Preference number: 6 (lower is better)
Translates to: PCWRNPPQAWHH*CWSAGLSPQNH
Trigger: ATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp ATGCCCACATGTTCCATGGGGTCCAAGGGGACACTCTaGGACTCCATGTTGGAGAAATCCTCCACAGGCTTG +
Preference number: 6 (lower is better)
Translates to: MPTCSMGSKGTL*DSMLEKSSTGL
Trigger: CAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp AATCAAACTGCAGAGGCTCCATGCCCACATGTTCCATaGGGTCCAAGGGGACACTCTGGGACTCCATGTTGG +
Preference number: 6 (lower is better)
Translates to: NQTAEAPCPHVP*GPRGHSGTPCW
Trigger: CCAACATGGAGTCCCAGAGTGTCCCCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTGCAGTTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp TGGTACGCAGCCTGGAGGATTTCATTGAAGACAAGCTaGCGCTCAGCTGCTGTGGCACGCTCTAGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: WYAAWRISLKTS*RSAAVARSSFS
Trigger: GCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCTGCGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp TCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATaGGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCA +
Preference number: 6 (lower is better)
Translates to: SMLEKSSTGLAP*VLVSWAKPSEP
Trigger: TGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CAA 72 bp TTGTCCCTGCTGGTTCTGATTTGGGGTCAAAGGACGTaGGCTAGCTCCTCCACGAAGAACCTGCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSLLVLIWGQRT*ASSSTKNLLLS
Trigger: GGACAGCAGCAGGTTCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp TCCACCATAAGTTGGTACGCAGCCTGGAGGATTTCATaGAAGACAAGCTGGCGCTCAGCTGCTGTGGCACGC +
Preference number: 6 (lower is better)
Translates to: STISWYAAWRIS*KTSWRSAAVAR
Trigger: GCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACTTATGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp CTCTGGGACTCCATGTTGGAGAAATCCTCCACAGGCTTGGCACCATaGGTGCTGGTCAGCTGGGCTAAGCCCTCAGAACCATTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: LWDSMLEKSSTGLAP*VLVSWAKPSEPFWF
Trigger: AAACCAGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS TCA 72 bp AGTTGCTGCTGCAGAGTCCACAGGTACCTGCGTGCCTaGATAATCAAACTGCAGAGGCTCCATGCCCACATG +
Preference number: 6 (lower is better)
Translates to: SCCCRVHRYLRA*IIKLQRLHAHM
Trigger: CATGTGGGCATGGAGCCTCTGCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGACTCTGCAGCAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS GCA 72 bp TGTTGGAGAAATCCTCCACAGGCTTGGCACCATTGGTaGTGGTCAGCTGGGCTAAGCCCTCAGAACCATTCT +
Preference number: 6 (lower is better)
Translates to: CWRNPPQAWHHW*WSAGLSPQNHS
Trigger: AGAATGGTTCTGAGGGCTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS GCA 72 bp TCTAGGATCCTCTGGATCACCCTACAGCCGTACGGGTaGGTAGACAAAGCAAACACCTGCCCCTTGAATGCA +
Preference number: 6 (lower is better)
Translates to: SRILWITLQPYG*VDKANTCPLNA
Trigger: TGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGGTGATCCAGAGGATCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp TGTTCCAGCTGCAAGAGCCTGATTTGCAGCTGGCTGTGGCTGCGCTaGCGACCCTGTTCCAGATGTCAAAACAACAGGCATGTTGGGATT +
Preference number: 6 (lower is better)
Translates to: CSSCKSLICSWLWLR*RPCSRCQNNRHVGI
Trigger: AATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGCCAGCTGCAAATCAGGCTCTTGCAGCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS CAA 90 bp TCCGAGGCCATTTCTTGCCCCTGCATTCACCACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGGTGCCAAGACTGGATAACCTGGCAT +
Preference number: 6 (lower is better)
Translates to: SEAISCPCIHHKGTS*VIVSSRCQDWITWH
Trigger: ATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTGGTGAATGCAGGGGCAAGAAATGGCCTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp CACAAGGGCACCAGTTTGGTCATAGTAAGCAGCAGGTaGCAAGACTGGATAACCTGGCATACCTGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: HKGTSLVIVSSR*QDWITWHTCSQ
Trigger: TTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp TCCAAAGCTTTCTGGATGACTCGGCAGCCGTACATCTaGAGTGCCAATGATAGGACATGGCCTCGAATCCGT +
Preference number: 6 (lower is better)
Translates to: SKAFWMTRQPYI*SANDRTWPRIR
Trigger: ACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp AAGGGGATCTGTTTGTTGTCCCTGCTGGTTCTGATTTaGGGTCAAAGGACGTTGGCTAGCTCCTCCACGAAG +
Preference number: 6 (lower is better)
Translates to: KGICLLSLLVLI*GQRTLASSSTK
Trigger: CTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACAACAAACAGATCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp CTTGCCATAGGTGTACTTTCGAAGCGTCGCAATGTGTaGCCGGATCTTGTGCATGACAATCTTCCGCTGACC +
Preference number: 6 (lower is better)
Translates to: LAIGVLSKRRNV*PDLVHDNLPLT
Trigger: GGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAAAGTACACCTATGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp CCAAACACATCCACCATAAGTTGGTACGCAGCCTGGAGGATTTCATaGAAGACAAGCTGGCGCTCAGCTGCTGTGGCACGCTCTAGTTTC +
Preference number: 6 (lower is better)
Translates to: PNTSTISWYAAWRIS*KTSWRSAAVARSSF
Trigger: GAAACTAGAGCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp ACCCTACAGCCGTACGGGTGCGTAGACAAAGCAAACACCTGCCCCTaGAATGCATCGATGATAAACTGCAAAGACTGGGGCTGTACACAC +
Preference number: 6 (lower is better)
Translates to: TLQPYGCVDKANTCP*NASMINCKDWGCTH
Trigger: GTGTGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp AAGAGCAGAATTCACTGCTGCAGCTGCTACAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATTTGGGGTCAAAGGACGTTGGCTAGC +
Preference number: 6 (lower is better)
Translates to: KSRIHCCSCYKGICL*SLLVLIWGQRTLAS
Trigger: GCTAGCCAACGTCCTTTGACCCCAAATCAGAACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp AGCAGCAGGTGCCAAGACTGGATAACCTGGCATACCTaGAGCCAATCCTTGTCCAAAGGCAAGAGCAGAATT +
Preference number: 6 (lower is better)
Translates to: SSRCQDWITWHT*SQSLSKGKSRI
Trigger: AATTCTGCTCTTGCCTTTGGACAAGGATTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp GGGAGCTGCTCTGGGAGTTACTGCTCAGAGAGTTGTTaGCATAGAAAGAGCTGGAAGCCAGATTGTTACTGG +
Preference number: 6 (lower is better)
Translates to: GSCSGSYCSESC*HRKSWKPDCYW
Trigger: CCAGTAACAATCTGGCTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp GGCTGCTATAAAAACTGTGTCCAATGGGGGCCAAGCTaGTCGATGTCCTCTTATAAAGGTCACTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: GCYKNCVQWGPS*SMSSYKGHCCQ
Trigger: CTGGCAGCAGTGACCTTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTTATAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp CGGGTGCGTAGACAAAGCAAACACCTGCCCCTTGAATaGATCGATGATAAACTGCAAAGACTGGGGCTGTAC +
Preference number: 6 (lower is better)
Translates to: RVRRQSKHLPLE*IDDKLQRLGLY
Trigger: GTACAGCCCCAGTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp ACCAGTTTGGTCATAGTAAGCAGCAGGTGCCAAGACTaGATAACCTGGCATACCTGCAGCCAATCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: TSLVIVSSRCQD*ITWHTCSQSLS
Trigger: GGACAAGGATTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp ATTCACTGCTGCAGCTGCTACAAGGGGATCTGTTTGTaGTCCCTGCTGGTTCTGATTTGGGGTCAAAGGACG +
Preference number: 6 (lower is better)
Translates to: IHCCSCYKGICL*SLLVLIWGQRT
Trigger: CGTCCTTTGACCCCAAATCAGAACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp TTGTCCAAAGGCAAGAGCAGAATTCACTGCTGCAGCTaGTACAAGGGGATCTGTTTGTTGTCCCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LSKGKSRIHCCS*YKGICLLSLLV
Trigger: AACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp CAATCCTTGTCCAAAGGCAAGAGCAGAATTCACTGCTaGAGCTGCTACAAGGGGATCTGTTTGTTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: QSLSKGKSRIHC*SCYKGICLLSL
Trigger: CAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp AGCCAATCCTTGTCCAAAGGCAAGAGCAGAATTCACTaGTGCAGCTGCTACAAGGGGATCTGTTTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: SQSLSKGKSRIH*CSCYKGICLLS
Trigger: GGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp CTACAGCCGTACGGGTGCGTAGACAAAGCAAACACCTaGCCCTTGAATGCATCGATGATAAACTGCAAAGAC +
Preference number: 6 (lower is better)
Translates to: LQPYGCVDKANT*PLNASMINCKD
Trigger: GTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp TCATGTAGTACTTCTCGAGCTTGGCCAGGATGTGCTTaGCATAGGTGTACTTTCGAAGCGTCGCAATGTGTG +
Preference number: 6 (lower is better)
Translates to: SCSTSRAWPGCA*HRCTFEASQCV
Trigger: CACACATTGCGACGCTTCGAAAGTACACCTATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp TTCTGCTGGTCTGAGGGAATAAACTCCAAAGCTTTCTaGATGACTCGGCAGCCGTACATCTGCAGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: FCWSEGINSKAF*MTRQPYICSAN
Trigger: ATTGGCACTGCAGATGTACGGCTGCCGAGTCATCCAGAAAGCTTTGGAGTTTATTCCCTCAGACCAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097864.9
ENSMUST00000105991.9
CDS CAA 72 bp ATTTCTTGCCCCTGCATTCACCACAAGGGCACCAGTTaGGTCATAGTAAGCAGCAGGTGCCAAGACTGGATA +
Preference number: 6 (lower is better)
Translates to: ISCPCIHHKGTS*VIVSSRCQDWI
Trigger: TATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTGGTGAATGCAGGGGCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp TGTTCCAGATGTCAAAACAACAGGCATGTTGGGATTAGCTGGTTCTaGAGGGTGATGTTTCAGGTGGGGGCTGAAAGAGTCCTGCCAAAG +
Preference number: 6 (lower is better)
Translates to: CSRCQNNRHVGISWF*RVMFQVGAERVLPK
Trigger: CTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 72 bp GCAAACACCTGCCCCTTGAATGCATCGATGATAAACTaGAAAGACTGGGGCTGTACACACTCAATGCACTTC +
Preference number: 6 (lower is better)
Translates to: ANTCPLNASMIN*KDWGCTHSMHF
Trigger: GAAGTGCATTGAGTGTGTACAGCCCCAGTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp TTTCCAAACACATCCACCATAAGTTGGTACGCAGCCTaGAGGATTTCATTGAAGACAAGCTGGCGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: FPNTSTISWYAA*RISLKTSWRSA
Trigger: AGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTGTTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CCA 72 bp AGTCCACGCCATTCTTCATGTAGTACTTCTCGAGCTTaGCCAGGATGTGCTTGCCATAGGTGTACTTTCGAA +
Preference number: 6 (lower is better)
Translates to: SPRHSSCSTSRA*PGCACHRCTFE
Trigger: TTCGAAAGTACACCTATGGCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp CCAGCAATCTCCCGCAGTTGTAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGAAGTCTGCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: PAISRSCKLGYR*FRKSSRSLLLP
Trigger: TGGCAGGAGCAGACTTCTGGAAGATTTTCGAAACAACCGGTACCCTAATTTACAACTGCGGGAGATTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 90 bp CCTAGCTTATCTCCATCAAACGTACCCTTGTTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCTGCATCCCTTGGGCCCTCGCCCATA +
Preference number: 6 (lower is better)
Translates to: PSLSPSNVPLFFFSP*SFSSLSASLGPSPI
Trigger: TATGGGCGAGGGCCCAAGGGATGCAGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105992.9
CDS CAA 90 bp AAATCTTTGACGTCTGCATCAATCCCATTCTGCACTGGCAAACCATaGGTCTTGTCCATCACATCTCCCTCCTCCTTCAAATCTCCTAGC +
Preference number: 6 (lower is better)
Translates to: KSLTSASIPFCTGKP*VLSITSPSSFKSPS
Trigger: GCTAGGAGATTTGAAGGAGGAGGGAGATGTGATGGACAAGACCAATGGTTTGCCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CAA 90 bp ATTATATGCCCAGCAATCTCCCGCAGTTGTAAATTAGGGTACCGGTaGTTTCGAAAATCTTCCAGAAGTCTGCTCCTGCCAGAGGGCATA +
Preference number: 6 (lower is better)
Translates to: IICPAISRSCKLGYR*FRKSSRSLLLPEGI
Trigger: TATGCCCTCTGGCAGGAGCAGACTTCTGGAAGATTTTCGAAACAACCGGTACCCTAATTTACAACTGCGGGAGATTGCTGGGCATATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp GCAATTACCAGGGGTACGGCTAAAATCTTTGACGTCTaGATCAATCCCATTCTGCACTGGCAAACCATTGGT +
Preference number: 6 (lower is better)
Translates to: AITRGTAKIFDV*INPILHWQTIG
Trigger: ACCAATGGTTTGCCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGCCGTACCCCTGGTAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CCA 72 bp GCTGGGCAGCTGTCAACTGCTGAACAGCAAGTGCATTaGGTCTTTGGAATAGCTGTTGTTGAGAATTGTAGT +
Preference number: 6 (lower is better)
Translates to: AGQLSTAEQQVH*VFGIAVVENCS
Trigger: ACTACAATTCTCAACAACAGCTATTCCAAAGACCCAATGCACTTGCTGTTCAGCAGTTGACAGCTGCCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CAA 90 bp CCTAGCTTATCTCCATCAAACGTACCCTTGTTCTTCTTTTCACCTTaGTCGTTTTCATCACTGTCTGCATCCCTTGGGCCAAATCCTCCT +
Preference number: 6 (lower is better)
Translates to: PSLSPSNVPLFFFSP*SFSSLSASLGPNPP
Trigger: AGGAGGATTTGGCCCAAGGGATGCAGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS GCA 72 bp CGGCTAAAATCTTTGACGTCTGCATCAATCCCATTCTaGACTGGCAAACCATTGGTCTTGTCCATCACATCT +
Preference number: 6 (lower is better)
Translates to: RLKSLTSASIPF*TGKPLVLSITS
Trigger: AGATGTGATGGACAAGACCAATGGTTTGCCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS CAA 90 bp CCCTCCTCCTTCAAATCTCCTAGCTTATCTCCATCAAACGTACCCTaGTTCTTCTTTTCACCTTTGTCGTTTTCATCACTGTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: PSSFKSPSLSPSNVP*FFFSPLSFSSLSAS
Trigger: GGATGCAGACAGTGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGGAGATTTGAAGGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105992.9
CDS TCA 72 bp TTCAATTCATCCATAGAGCGTACCTGGTGTTCTGCATaGATGTTATCCCCTGTAGGCCATCGATGTTTGCTA +
Preference number: 6 (lower is better)
Translates to: FNSSIERTWCSA*MLSPVGHRCLL
Trigger: TAGCAAACATCGATGGCCTACAGGGGATAACATTCATGCAGAACACCAGGTACGCTCTATGGATGAATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS TCA 72 bp ACACACTTCTCCACAACATTGCTTGCAAACTTGTGCTaGCTCAATACAAGTACATTGCCTCGGATCTCTGCT +
Preference number: 6 (lower is better)
Translates to: THFSTTLLANLC*LNTSTLPRISA
Trigger: AGCAGAGATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAGCAATGTTGTGGAGAAGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp CACTGTCTCGCCATTGATCACCCAGGAATATTCCTTTaGGTCCATCTTTGCTGGATTCATCTGTTTCCCAAA +
Preference number: 6 (lower is better)
Translates to: HCLAIDHPGIFL*VHLCWIHLFPK
Trigger: TTTGGGAAACAGATGAATCCAGCAAAGATGGACCAAAAGGAATATTCCTGGGTGATCAATGGCGAGACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
CDS GCA 72 bp ATGATTCAATTCATCCATAGAGCGTACCTGGTGTTCTaGATGAATGTTATCCCCTGTAGGCCATCGATGTTT +
Preference number: 6 (lower is better)
Translates to: MIQFIHRAYLVF*MNVIPCRPSMF
Trigger: AAACATCGATGGCCTACAGGGGATAACATTCATGCAGAACACCAGGTACGCTCTATGGATGAATTGAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
ENSMUST00000143277.8
CDS GCA 72 bp ATACAAGTACATTGCCTCGGATCTCTGCTACAATTTTaGTTTTATCCTCAGGACGACCATGCTCCAGTACAT +
Preference number: 6 (lower is better)
Translates to: IQVHCLGSLLQF*FYPQDDHAPVH
Trigger: ATGTACTGGAGCATGGTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp CTGAATGACGTAATTTCCAAACACATCCACCATAAGTaGGTACGCAGCCTGGAGGATTTCATTGAAGACAAG +
Preference number: 6 (lower is better)
Translates to: LNDVISKHIHHK*VRSLEDFIEDK
Trigger: CTTGTCTTCAATGAAATCCTCCAGGCTGCGTACCAACTTATGGTGGATGTGTTTGGAAATTACGTCATTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS CAA 72 bp AATACAAGTACATTGCCTCGGATCTCTGCTACAATTTaGCTTTTATCCTCAGGACGACCATGCTCCAGTACA +
Preference number: 6 (lower is better)
Translates to: NTSTLPRISATI*LLSSGRPCSST
Trigger: TGTACTGGAGCATGGTCGTCCTGAGGATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9
CDS GCA 72 bp TGCTTGCAAACTTGTGCTGACTCAATACAAGTACATTaGCTCGGATCTCTGCTACAATTTTGCTTTTATCCT +
Preference number: 6 (lower is better)
Translates to: CLQTCADSIQVH*LGSLLQFCFYP
Trigger: AGGATAAAAGCAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030315.13
ENSMUST00000097862.3
ENSMUST00000097864.9
ENSMUST00000105991.9
ENSMUST00000105992.9