Pregenerated sensors for PUF60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002524Ensembl transcript IDs: ENSMUST00000002599.11, ENSMUST00000100527.13, ENSMUST00000227316.2, ENSMUST00000230924.2
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAGCCACTGCTTCCTGAGCTGTAATCTTGGCCGTGGCTGCAGCTaGGGCCACAGCAGCAGCAGGCGGGAGACCTCCAGGCGTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SSHCFLSCNLGRGCS*GHSSSRRETSRRGR Trigger: CCTGCCACGCCTGGAGGTCTCCCGCCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 90 bp | TGCTGCTCCAGCCACTGCTTCCTGAGCTGTAATCTTGGCCGTGGCTaGAGCTGCGGCCACAGCAGCAGCAGGCGGGAGACCTCCAGGCGT | + |
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Preference number: 1 (lower is better) Translates to: CCSSHCFLSCNLGRG*SCGHSSSRRETSRR Trigger: ACGCCTGGAGGTCTCCCGCCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 90 bp | CTCCTCCTCTTCCTTCTCCTTCTTGGGCTCCAACAGACCCAACGTTaGCGGGCTGGCGAGAATGGGGTTCACTACTCCCACAGAGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLLFLLLLGLQQTQR*RAGENGVHYSHRGD Trigger: ATCCCCTCTGTGGGAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCCAAGAAGGAGAAGGAAGAGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 90 bp | CTTCCCACCTTGATGTTCCTGCCCCCAAGCATCACAGAGTTCATCTaGTCCAAAGCGAGCTGCGCAGCTTCTGGGACCTCGTACTCCACG | + |
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Preference number: 1 (lower is better) Translates to: LPTLMFLPPSITEFI*SKASCAASGTSYST Trigger: CGTGGAGTACGAGGTCCCAGAAGCTGCGCAGCTCGCTTTGGAGCAGATGAACTCTGTGATGCTTGGGGGCAGGAACATCAAGGTGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 90 bp | ATGACCATGTGGCGAGCACTGCTGCCCGAGATGCTCATGTGCTCCTaGTCACTCAACATCTCTGGCCGTTCTGACTCAGGAAACAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: MTMWRALLPEMLMCS*SLNISGRSDSGNSS Trigger: GGAGCTGTTTCCTGAGTCAGAACGGCCAGAGATGTTGAGTGAGCAGGAGCACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 90 bp | CCTTGCCCACCCTCAAGTACTGGCCACCCAGATCAAAGAGGTTCATaGAGGACACAGCATCCTGGGACGACTGGGCCTTCTCATATTCGA | + |
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Preference number: 1 (lower is better) Translates to: PCPPSSTGHPDQRGS*RTQHPGTTGPSHIR Trigger: TCGAATATGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATCTGGGTGGCCAGTACTTGAGGGTGGGCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 90 bp | GAGGCCACATATATTCGGTTGAAAGCCCTAGCTTCCTCAGCCAGCTaGTCTATGATGGGTTGGGCTTGTCCAATGTTGCTGGGTCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: EATYIRLKALASSAS*SMMGWACPMLLGLP Trigger: GGGAAGACCCAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCTTTCAACCGAATATATGTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 90 bp | ACCAAACCAGCGCCCATTGAGGGCCTGGATGGCCTTGTGAGTCTCTaGGGCCATGGAGAATTCCACAAAAATCTTGACGATGATTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: TKPAPIEGLDGLVSL*GHGEFHKNLDDDFC Trigger: GCAGAAATCATCGTCAAGATTTTTGTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 90 bp | TTTCGGAGAACCATCACTGTAGACTCCTGTTTTCTGAGTAGCTTTTaGATGACCATGTGGCGAGCACTGCTGCCCGAGATGCTCATGTGC | + |
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Preference number: 1 (lower is better) Translates to: FRRTITVDSCFLSSF*MTMWRALLPEMLMC Trigger: GCACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAAACAGGAGTCTACAGTGATGGTTCTCCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | GCTCCTCCTCTTCCTTCTCCTTCTTGGGCTCCAACAGACCCAACGTaGGCGGGCTGGCGAGAATGGGGTTCACTACTCCCACAGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: APPLPSPSWAPTDPT*AGWREWGSLLPQRG Trigger: TCCCCTCTGTGGGAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCCAAGAAGGAGAAGGAAGAGGAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCGTGGGTTGGGCAGAGTaGCTGGTCCCAGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTVGWAE*LVPGTH Trigger: GTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCAC...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCCATAGCCCTTGTGCTTaGCAGTTGTGGGGTCCCGGG | + |
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Preference number: 2 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTHSPCA*QLWGPG Trigger: CCCGGGACCCCACAACTGGCAAGCACAAGGGCTATG...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCCACTACAGGGTGGGTTaGGCAGAGTGCCTGGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTHYRVG*AECLVP Trigger: TGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTG...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGGTTCACAGCACCAAATTTGCCACACTCCTCTGTCACCTCTCCCTCCAGGTCCATGTGGCGAGCACTaGTGCCCGAGATGCTCATGT | + |
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Preference number: 2 (lower is better) Translates to: PGSQHQICHTPLSPLPPGPCGEH*CPRCSC Trigger: ACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGG...ACCTGGAGGGAGAGGTGACAGAGGAGTGTGGCAAATTTGGTGCTGTGAACCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACCCAACGTTGGCGGGCTaGCGAGAATGGGGTTCACTA | + |
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Preference number: 2 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDPTLAG*REWGSL Trigger: TAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGG...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | TCGCTGTTATCAAAACGCTCCTGGTCATACACTTCAGCCACCACCTaGCGACCACCAAACCAGCGCCCATTGAGGGCCTGGATGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLSKRSWSYTSATT*RPPNQRPLRAWMAL Trigger: CAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTTTTGATAACAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGAGGTTCATGGAGGACACAGCATCCTGGGACGACTGGGCCTTCTCATATTGTGGGTTGGGCAGAGTaGCTGGTCCCAGGGACACAC | + |
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Preference number: 2 (lower is better) Translates to: QRGSWRTQHPGTTGPSHIVGWAE*LVPGTH Trigger: GTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCAC...AATATGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTCCATGAACCTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | GAAAGCCCTAGCTTCCTCAGCCAGCTGATCTATGATGGGTTGGGCTaGTCCAATGTTGCTGGGTCTTCCCACCTTGATGTTCCTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: ESPSFLSQLIYDGLG*SNVAGSSHLDVPAP Trigger: GGGGGCAGGAACATCAAGGTGGGAAGACCCAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | CCACACTCCTCTGTCACCTCTCCCTCCAGGTCGTCATCGATGTCCTaGGGGTCCACCATGTTTCGGAGAACCATCACTGTAGACTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PHSSVTSPSRSSSMS*GSTMFRRTITVDSC Trigger: ACAGGAGTCTACAGTGATGGTTCTCCGAAACATGGTGGACCCCAAGGACATCGATGACGACCTGGAGGGAGAGGTGACAGAGGAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTCACTCAACATCTCTGGCCGTTCTGACTCAGGAAACAGCTCCTCCTCTTCCCCAGCCACTGCTTCCTaGGCTGTAATCTTGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: CSLNISGRSDSGNSSSSSPATAS*AVILAV Trigger: CACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGG...GGAAGAGGAGGAGCTGTTTCCTGAGTCAGAACGGCCAGAGATGTTGAGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | TCAGGGCCAGTGGTATCTGCATCTTTATGTACACTACAGGGTGGGTaGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTT | + |
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Preference number: 2 (lower is better) Translates to: SGPVVSASLCTLQGG*GRVPGPRDTPRLTL Trigger: AAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCAGATACCACTGGCCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTCACGCGGAGAGGTCGCTGTTATCAAAACGCTCCTGGTCATACACTTCAGAGGACACAGCATCCTaGGACGACTGGGCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QSHAERSLLSKRSWSYTSEDTAS*DDWAFS Trigger: TGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTC...TGAAGTGTATGACCAGGAGCGTTTTGATAACAGCGACCTCTCCGCGTGACTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | TCGGTTGAAAGCCCTAGCTTCCTCAGCCAGCTGATCTATGATGGGTaGGGCTTGTCCAATGTTGCTGGGTCTTCCCACCTTGATGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SVESPSFLSQLIYDG*GLSNVAGSSHLDVP Trigger: AGGAACATCAAGGTGGGAAGACCCAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCTTTCAACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CAA 90 bp | CCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTaGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PLCFMVTESQDISML*MGPKGAKAWRIVSS Trigger: AGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTCCTTGGGGTCCACCATGTTTCGGAGAACCATCACTGTAGACTCCTGTTTTGCTGCTCCAGCCACTaGTTCCTGAGCTGTAATCTT | + |
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Preference number: 2 (lower is better) Translates to: DVLGVHHVSENHHCRLLFCCSSH*FLSCNL Trigger: AAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCA...AAACAGGAGTCTACAGTGATGGTTCTCCGAAACATGGTGGACCCCAAGGACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR GCA 90 bp | GCCATGGAGAATTCCACAAAAATCTTGACGATGATTTCTGCATCTTCCTCTTCGTTTCTGAGTAGCTTTTaGATGACCATGTGGCGAGCA | + |
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Preference number: 2 (lower is better) Translates to: AMENSTKILTMISASSSSFLSSF*MTMWRA Trigger: TGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAA...CGAAGAGGAAGATGCAGAAATCATCGTCAAGATTTTTGTGGAATTCTCCATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCTCCAACAGACCCAACGTTGGCGGGCTGGCGAGAATGGGGTTCACTACTCCCCTTGTGCTTGCCAGTaGTGGGGTCCCGGGCCAGCG | + |
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Preference number: 3 (lower is better) Translates to: GLQQTQRWRAGENGVHYSPCACQ*WGPGPA Trigger: CGCTGGCCCGGGACCCCACAACTGGCAAGCACAAGG...GGAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 72 bp | TGCTTCCTGAGCTGTAATCTTGGCCGTGGCTGCAGCTaGGGCCACAGCAGCAGCAGGCGGGAGACCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: CFLSCNLGRGCS*GHSSSRRETSR Trigger: CCTGGAGGTCTCCCGCCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATTACAGCTCAGGAAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 72 bp | CAGCCACCACCTTGCGACCACCAAACCAGCGCCCATTaGGGGCCTGGATGGCCTTGTGAGTCTCTGAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QPPPCDHQTSAH*GPGWPCESLRP Trigger: TGGCCTCAGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 72 bp | CCTTCTTGGGCTCCAACAGACCCAACGTTGGCGGGCTaGCGAGAATGGGGTTCACTACTCCCACAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PSWAPTDPTLAG*REWGSLLPQRG Trigger: TCCCCTCTGTGGGAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCCAAGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 72 bp | ACCATGTGGCGAGCACTGCTGCCCGAGATGCTCATGTaGTCCTGCTCACTCAACATCTCTGGCCGTTCTGAC | + |
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Preference number: 3 (lower is better) Translates to: TMWRALLPEMLM*SCSLNISGRSD Trigger: GTCAGAACGGCCAGAGATGTTGAGTGAGCAGGAGCACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 72 bp | TTGATGTTCCTGCCCCCAAGCATCACAGAGTTCATCTaGTCCAAAGCGAGCTGCGCAGCTTCTGGGACCTCG | + |
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Preference number: 3 (lower is better) Translates to: LMFLPPSITEFI*SKASCAASGTS Trigger: CGAGGTCCCAGAAGCTGCGCAGCTCGCTTTGGAGCAGATGAACTCTGTGATGCTTGGGGGCAGGAACATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 72 bp | GCCAGTGGTATCTGCATCTTTATGTACACTACAGGGTaGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACC | + |
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Preference number: 3 (lower is better) Translates to: ASGICIFMYTTG*VGQSAWSQGHT Trigger: GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCAGATACCACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
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| 3UTR CCA 72 bp | CCCTCAAGTACTGGCCACCCAGATCAAAGAGGTTCATaGAGGACACAGCATCCTGGGACGACTGGGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PSSTGHPDQRGS*RTQHPGTTGPS Trigger: AGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATCTGGGTGGCCAGTACTTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 72 bp | AGTCACGCGGAGAGGTCGCTGTTATCAAAACGCTCCTaGTCATACACTTCAGCCACCACCTTGCGACCACCA | + |
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Preference number: 3 (lower is better) Translates to: SHAERSLLSKRS*SYTSATTLRPP Trigger: TGGTGGTCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTTTTGATAACAGCGACCTCTCCGCGTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 72 bp | CCAAACCAGCGCCCATTGAGGGCCTGGATGGCCTTGTaGGTCTCTGAGGCCATGGAGAATTCCACAAAAATC | + |
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Preference number: 3 (lower is better) Translates to: PNQRPLRAWMAL*VSEAMENSTKI Trigger: GATTTTTGTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR CCA 72 bp | GACTCCTGTTTTCTGAGTAGCTTTTGCATGACCATGTaGCGAGCACTGCTGCCCGAGATGCTCATGTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: DSCFLSSFCMTM*RALLPEMLMCS Trigger: GGAGCACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAAACAGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 72 bp | GCGCCCATTGAGGGCCTGGATGGCCTTGTGAGTCTCTaGGGCCATGGAGAATTCCACAAAAATCTTGACGAT | + |
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Preference number: 3 (lower is better) Translates to: APIEGLDGLVSL*GHGEFHKNLDD Trigger: ATCGTCAAGATTTTTGTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGCCCTCAATGGGCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR TCA 72 bp | TATATTCGGTTGAAAGCCCTAGCTTCCTCAGCCAGCTaGTCTATGATGGGTTGGGCTTGTCCAATGTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: YIRLKALASSAS*SMMGWACPMLL Trigger: CAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCTTTCAACCGAATATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR-3UTR CAA 90 bp | TCGATGTCCTTGGGGTCCACCATGTTTCGGAGAACCATCACTGTAGACTCCTGTGTACAAGACTTGATCTaGCCAAAGGCTTCAAATACA | + |
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Preference number: 3 (lower is better) Translates to: SMSLGSTMFRRTITVDSCVQDLI*PKASNT Trigger: TGTATTTGAAGCCTTTGGCAAGATCAAGTCTTGTAC...ACAGGAGTCTACAGTGATGGTTCTCCGAAACATGGTGGACCCCAAGGACATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| 3UTR GCA 72 bp | CATGGAGAATTCCACAAAAATCTTGACGATGATTTCTaGATCTTCCTCTTCGCCCTGTTTTTCTTGATAGAT | + |
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Preference number: 3 (lower is better) Translates to: HGEFHKNLDDDF*IFLFALFFLID Trigger: ATCTATCAAGAAAAACAGGGCGAAGAGGAAGATGCAGAAATCATCGTCAAGATTTTTGTGGAATTCTCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| CDS-3UTR TCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTGGGCCTGGGCAGCCATaGCAGCCTGGGGTAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGGPGQP*QPGVGP Trigger: GGGCCCTACCCCAGGCTGTCATGGCTGCCCAGGCCC...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR TCA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGGGGCCTGGGCAGCCATaGCAGCCTGGGGTAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRGPGQP*QPGVGP Trigger: GGGCCCTACCCCAGGCTGTCATGGCTGCCCAGGCCC...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR GCA 90 bp | ACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACCGCTGCAGCCGCTGCTaGTGGCTCCGACCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTGWVGQSAWSQGHTTVNRCSRC*WLRPSS Trigger: GGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG...GTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTCGCTGCAGCCGCTGCTaGTGGCTCCGACCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVRCSRC*WLRPSS Trigger: GGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | GGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACTCCTGCTGCCACCACTaGCGCCGCCGCCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGLGRVPGPRDTPRLTLYSCCHH*RRRRCS Trigger: GCTGCAGCGGCGGCGGCGGCAGTGGTGGCAGCAGGA...GTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTGGCCGTGGCTGCAGCTaGGGCCACAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVGRGCS*GHSSSR Trigger: CCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACGGCC...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | ACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACGGCCGTGGCTGCAGCTaGGGCCACAGCAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGWVGQSAWSQGHTTVNGRGCS*GHSSSR Trigger: CCTGCTGCTGCTGTGGCCGCAGCTGCAGCCACGGCC...GTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TGCCACACTCCTCTGTCACCTCTCCCTCCAGGTCGTCATCGATGTCCTTGGGGTCGCTGCAGCCGCTGCTaGTGGCTCCGACCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHTPLSPLPPGRHRCPWGRCSRC*WLRPSS Trigger: GGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG...ACCCCAAGGACATCGATGACGACCTGGAGGGAGAGGTGACAGAGGAGTGTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTATGGAGGGCCTCCTGCTaGTCGGGCGTCAGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLWRASC*SGVRGG Trigger: GCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCA...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR CCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTAGGGCCCCTAAGGGCTaGGCCAGTGTCAGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGRAPKG*ASVSAG Trigger: CCCAGCACTGACACTGGCCCAGCCCTTAGGGGCCCT...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTAATCTTGGCCGTGGCTaGAGCTGCGGCCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGNLGRG*SCGHSS Trigger: GCTGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATT...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR CCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTGGAGACCTCCAGGCGTaGCAGGTGTTAGCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGGDLQA*QVLAGA Trigger: TGCCCCTGCTAACACCTGCCACGCCTGGAGGTCTCC...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | AACGCTCCTGGTCATACACTTCAGCCACCACCTTGCGACCACCAAACCAGCGCCTTCTGGAGGGCCTCCTaGTGCTCGGGCGTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NAPGHTLQPPPCDHQTSAFWRAS*CSGVRG Trigger: TCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCAGAA...GGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAATGACTCCAGGGGCCTaGGCAGCCATGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLMTPGA*AAMTAW Trigger: CCAGGCTGTCATGGCTGCCCAGGCCCCTGGAGTCAT...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTCCAGCCACTGCTTCCTaGGCTGTAATCTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGPATAS*AVILAV Trigger: CACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGG...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | CTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACAAACCAGCGCCCATTaGGGGCCTGGATGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGGLGRVPGPRDTPRLTQTSAH*GPGWPC Trigger: ACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTG...TGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTCTCCTTGTTGGCCATTaGCCTGTCCTCCGAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGLLVGH*PVLRAE Trigger: CTCAGCTCGGAGGACAGGTCAATGGCCAACAAGGAG...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTATGCAGGTTGGTGAGCTaGTGCTGCTGGTGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLCRLVS*CCWCAM Trigger: CATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCA...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | ACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACCATAGCCCTTGTGCTTaGCAGTTGTGGGGTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTGWVGQSAWSQGHTTVNHSPCA*QLWGPG Trigger: CCCGGGACCCCACAACTGGCAAGCACAAGGGCTATG...GTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | CTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTCAGCCACCACCTTaGGACCACCAAACCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQGGLGRVPGPRDTPRLTLQPPP*DHQTSA Trigger: GGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAG...TGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR TCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCCCATCTGCAGGTTGGTaGGCTGCTGCTGCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTPSAGW*AAAAGA Trigger: CGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGG...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR TCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTTGGGTCTTCCCACCTTaGTGTTCCTGCCCCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVWVFPP*CSCPQA Trigger: TGCTTGGGGGCAGGAACATCAAGGTGGGAAGACCCA...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR TCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTATGGGTCTTCCCACCTTaGTGTTCCTGCCCCCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLWVFPP*CSCPQA Trigger: TGCTTGGGGGCAGGAACATCAAGGTGGGAAGACCCA...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR TCA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGGCTTCCTCAGCCAGCTaGTCTATGATGGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRASSAS*SMMGWA Trigger: AGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGC...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR TCA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGGGCCTTGTGAGTCTCTaGGGCCATGGAGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRGLVSL*GHGEFH Trigger: GTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCC...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR GCA 90 bp | GGACATATCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTCGCTGCAGCCGCTGCTaGTGGCTCCGACCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHINALDGAKGSKGLANSRCSRC*WLRPSS Trigger: GGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG...ACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGATATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS-3UTR GCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAACCATTTGTCTCCTGCTaGCACCACTGCCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKPFVSC*HHCRRR Trigger: GCGGCGGCGGCAGTGGTGGCAGCAGGAGACAAATGG...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | ATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCTCCCCCATTTGTCTCCTGCTaGCACCACTGCCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: MLLMGPKGAKAWRIVSSPPFVSC*HHCRRR Trigger: GCGGCGGCGGCAGTGGTGGCAGCAGGAGACAAATGG...GGGAGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS-3UTR GCA 90 bp | TCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCTTGGAGGGCCTCCTGCTaGTCGGGCGTCAGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SMLLMGPKGAKAWRIVSSWRASC*SGVRGG Trigger: GCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCA...AGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS-3UTR GCA 90 bp | CATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACATTCTGGAGGGCCTCCTaGTGCTCGGGCGTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLYVHYRVGWAECLVPGTFWRAS*CSGVRG Trigger: TCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCAGAA...TGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | TGGGCTCCAACAGACCCAACGTTGGCGGGCTGGCGAGAATGGGGTTCACTACTCTTGGTGAGCTGCTGCTaGTGGTGCGCGATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WAPTDPTLAGWREWGSLLLVSCC*WCAMVC Trigger: ACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAA...GAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
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| CDS-3UTR GCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACAATCTTGGCCGTGGCTaGAGCTGCGGCCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDNLGRG*SCGHSS Trigger: GCTGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATT...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR GCA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACTTCAGCCACCACCTTaGGACCACCAAACCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLLQPPP*DHQTSA Trigger: GGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAG...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR CCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAGCTGCTGGTGCGCGATaGTCTGTTTCACCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLAAGAR*SVSPAH Trigger: GTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGC...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR CCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAGAGGACACAGCATCCTaGGACGACTGGGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLEDTAS*DDWAFS Trigger: TGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTC...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
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| CDS-3UTR CCA 90 bp | CATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACAGCAGCCATGACAGCCTaGGGTAGGGCCCCTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLYVHYRVGWAECLVPGTAAMTA*GRAPKG Trigger: GCCCTTAGGGGCCCTACCCCAGGCTGTCATGGCTGC...TGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | CTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACCAACGTTGGCGGGCTaGCGAGAATGGGGTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LQGGLGRVPGPRDTPRLTPTLAG*REWGSL Trigger: TAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGG...TGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCATCTGCAGGTTGGTaGGCTGCTGCTGCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTPSAGW*AAAAGA Trigger: CGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGG...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR TCA 90 bp | CATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACAAGTGCCCGCTGCCGTTaGGCTGCCATCTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLYVHYRVGWAECLVPGTSARCR*AAICRL Trigger: CAACCTGCAGATGGCAGCTCAACGGCAGCGGGCACT...TGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGTGGAGGGCCTCCTGCTaGTCGGGCGTCAGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALMLHGNGVPGHINALDGWRASC*SGVRGG Trigger: GCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCA...CCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTATTGGTGAGCTGCTGCTaGTGGTGCGCGATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLLVSCC*WCAMVC Trigger: ACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAA...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACAGGTTGGTGAGCTGCTaGTGCTGGTGCGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDRLVSC*CWCAMV Trigger: GACCATCGCGCACCAGCAGCAGCAGCTCACCAACCT...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACTGCAGGTTGGTGAGCTaGTGCTGCTGGTGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDCRLVS*CCWCAM Trigger: CATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCA...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTCCCGAGATGCTCATGTaGTCCTGCTCACTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: VHYRVGWAECLVPGTHHGPEMLM*SCSLNI Trigger: GATGTTGAGTGAGCAGGAGCACATGAGCATCTCGGG...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTACCAGCTCATAGTAGATaGAGCCCACATAGACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLPAHSR*SPHRPG Trigger: GCCGGGTCTATGTGGGCTCCATCTACTATGAGCTGG...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCATGTGCTTGCCAGTTGTaGGGTCCCGGGCCAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPCACQL*GPGPAY Trigger: GTACGCTGGCCCGGGACCCCACAACTGGCAAGCACA...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAGCAGCCATGACAGCCTaGGGTAGGGCCCCTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQAAMTA*GRAPKG Trigger: GCCCTTAGGGGCCCTACCCCAGGCTGTCATGGCTGC...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAATGACTCCAGGGGCCTaGGCAGCCATGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVGQSAWSQGHTTVNTLQMTPGA*AAMTAW Trigger: CCAGGCTGTCATGGCTGCCCAGGCCCCTGGAGTCAT...TTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAGCCTGGATGGCCTTGTaGGTCTCTGAGGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WVGQSAWSQGHTTVNTLQAWMAL*VSEAME Trigger: CTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGC...TTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAGCCTGGATGGCCTTGTaGGTCTCTGAGGCCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKAWMAL*VSEAME Trigger: CTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGC...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCACAAACCAGCGCCCATTaGGGGCCTGGATGGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPQTSAH*GPGWPC Trigger: ACAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTG...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCCCATTTGTCTCCTGCTaGCACCACTGCCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: INALDGAKGSKGLANSVFPFVSC*HHCRRR Trigger: GCGGCGGCGGCAGTGGTGGCAGCAGGAGACAAATGG...GAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGTGGAGGGCCTCCTGCTaGTCGGGCGTCAGGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKWRASC*SGVRGG Trigger: GCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCA...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGTTCTGGAGGGCCTCCTaGTGCTCGGGCGTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRFWRAS*CSGVRG Trigger: TCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCAGAA...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | CATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACAAGGTTGGTGAGCTGCTaGTGCTGGTGCGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLYVHYRVGWAECLVPGTRLVSC*CWCAMV Trigger: GACCATCGCGCACCAGCAGCAGCAGCTCACCAACCT...TGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACCATAGCCCTTGTGCTTaGCAGTTGTGGGGTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFMYTTGWVGQSAWSQGHHSPCA*QLWGPG Trigger: CCCGGGACCCCACAACTGGCAAGCACAAGGGCTATG...GTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCCCATGTGGCGAGCACTaGTGCCCGAGATGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTPCGEH*CPRCSC Trigger: ACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGG...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTCGTCATCGATGTCCTTaGGGTCCACCATGTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVRHRCP*GPPCFG Trigger: TCCGAAACATGGTGGACCCCAAGGACATCGATGACG...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| 3UTR CAA 72 bp | TCAAAACGCTCCTGGTCATACACTTCAGCCACCACCTaGCGACCACCAAACCAGCGCCCATTGAGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKRSWSYTSATT*RPPNQRPLRAW Trigger: CCAGGCCCTCAATGGGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTTTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRVHFPS*WILCPV Trigger: CACAGGGCACAGAATCCATCAAGATGGAAAATGGAC...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | GTACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATAGTGCCCGCTGCCGTTaGGCTGCCATCTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHEGKALMLHGNGVPGHSARCR*AAICRL Trigger: CAACCTGCAGATGGCAGCTCAACGGCAGCGGGCACT...ATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR TCA 90 bp | CATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACCAGCCACTGCTTCCTaGGCTGTAATCTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLYVHYRVGWAECLVPGTPATAS*AVILAV Trigger: CACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGG...TGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAGCTGCTGCTGCTGGTaGGCGATGGTCTGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPSCCCW*AMVCFT Trigger: GGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCT...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGTTGGTGAGCTGCTaGTGCTGGTGCGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQRLVSC*CWCAMV Trigger: GACCATCGCGCACCAGCAGCAGCAGCTCACCAACCT...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTATGCTCATGTGCTCCTaGTCACTCAACATCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVMLMCS*SLNISG Trigger: GCCAGAGATGTTGAGTGAGCAGGAGCACATGAGCAT...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAACACTGCTGCCCGAGATaGTCATGTGCTCCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKHCCPR*SCAPAH Trigger: GTGAGCAGGAGCACATGAGCATCTCGGGCAGCAGTG...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TGCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGATGTGGCGAGCACTGCTaGCCGAGATGCTCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIFMYTTGWVGQSAWSQGCGEHC*PRCSCA Trigger: AGCACATGAGCATCTCGGGCAGCAGTGCTCGCCACA...TCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTCCATTGCATATTTCTTaGCCTTCTGGAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVPLHIS*PSGGPP Trigger: AGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGG...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAGCTGCTGGTGCGCGATaGTCTGTTTCACCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKAAGAR*SVSPAH Trigger: GTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGC...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR CCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACAGTGAGCTGCTGCTGCTaGTGCGCGATGGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTVSCCC*CAMVCF Trigger: GAAACAGACCATCGCGCACCAGCAGCAGCAGCTCAC...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACGTGAGCTGCTGCTGCTaGTGCGCGATGGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFMYTTGWVGQSAWSQGHVSCCC*CAMVCF Trigger: GAAACAGACCATCGCGCACCAGCAGCAGCAGCTCAC...GTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACCCAGCTCATAGTAGATaGAGCCCACATAGACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDPAHSR*SPHRPG Trigger: GCCGGGTCTATGTGGGCTCCATCTACTATGAGCTGG...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACAGAGGACACAGCATCCTaGGACGACTGGGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTEDTAS*DDWAFS Trigger: TGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTC...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAGATCAAAGAGGTTCATaGAGGACACAGCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLDQRGS*RTQHPG Trigger: CCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATC...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGGAGACCTCCAGGCGTaGCAGGTGTTAGCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VPGPRDTPRLTLYKTQRKGDLQA*QVLAGA Trigger: TGCCCCTGCTAACACCTGCCACGCCTGGAGGTCTCC...CTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAGGGCCCCTAAGGGCTaGGCCAGTGTCAGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHTTVNTLQNPKEGRGKCRAPKG*ASVSAG Trigger: CCCAGCACTGACACTGGCCCAGCCCTTAGGGGCCCT...GCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | ATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACCCAACGTTGGCGGGCTaGCGAGAATGGGGTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: IFMYTTGWVGQSAWSQGHPTLAG*REWGSL Trigger: TAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGG...GTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| 3UTR CAA 72 bp | GTGGTATCTGCATCTTTATGTACACTACAGGGTGGGTaGGGCAGAGTGCCTGGTCCCAGGGACACACCACGG | + |
|
Preference number: 4 (lower is better) Translates to: VVSASLCTLQGG*GRVPGPRDTPR Trigger: CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCAGATACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLVHFPS*WILCPV Trigger: CACAGGGCACAGAATCCATCAAGATGGAAAATGGAC...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGTCACGCGGAGAGGTCGCTGTTATCAAAACGCTCCTGGTCATACACTTCACCATCTGCAGGTTGGTaGGCTGCTGCTGCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSHAERSLLSKRSWSYTSPSAGW*AAAAGA Trigger: CGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGG...TGAAGTGTATGACCAGGAGCGTTTTGATAACAGCGACCTCTCCGCGTGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | TTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGGCCAAAGGGAAGTGCCCGCTGCCGTTaGGCTGCCATCTGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FMVTESQDISMLLMGPKGSARCR*AAICRL Trigger: CAACCTGCAGATGGCAGCTCAACGGCAGCGGGCACT...TCCCTTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACAGCTTCCTCAGCCAGCTaGTCTATGATGGGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTASSAS*SMMGWA Trigger: AGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGC...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTACCAGCTTGGTGCCTGTaGTTTGTCCATTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLPAWCL*FVHFPS Trigger: AGATGGAAAATGGACAAAGCACAGGCACCAAGCTGG...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGGCCAAATTCTGGAGGGCCTCCTaGTGCTCGGGCGTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLHGNGVPGHINALDGAKFWRAS*CSGVRG Trigger: TCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCAGAA...TTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | TCGTACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACAGCTGCTGCTGCTGGTaGGCGATGGTCTGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SYSTKAKPLCFMVTESQDSCCCW*AMVCFT Trigger: GGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCT...GTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCAAGTCCAGGAAATGAGGCCAAAGTCACGCGGAGAGGTCGCTGTTATCAATGCAGGTTGGTGAGCTaGTGCTGCTGGTGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SASPGNEAKVTRRGRCYQCRLVS*CCWCAM Trigger: CATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCA...TTGATAACAGCGACCTCTCCGCGTGACTTTGGCCTCATTTCCTGGACTTGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GTACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATTGCAGGTTGGTGAGCTaGTGCTGCTGGTGCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VLHEGKALMLHGNGVPGHCRLVS*CCWCAM Trigger: CATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCA...ATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAATGTGGCGAGCACTGCTaGCCGAGATGCTCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQCGEHC*PRCSCA Trigger: AGCACATGAGCATCTCGGGCAGCAGTGCTCGCCACA...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAGACCCTCCTCCTTGTTaGCCATTGACCTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPDPPPC*PLTWRA Trigger: AGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTC...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACGGATTCTGTGCCCTGTaGAGGTTTCCATTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVPGPRDTPRLTLYGFCAL*RFPFVS Trigger: GGAGACAAATGGAAACCTCCACAGGGCACAGAATCC...GTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCCTTCCTTCTCCTTCTTaGGCTCCAACAGACCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTLPSPS*APTDPT Trigger: CGTTGGGTCTGTTGGAGCCCAAGAAGGAGAAGGAAG...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACCTTCCTTCTCCTTCTTaGGCTCCAACAGACCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDLPSPS*APTDPT Trigger: CGTTGGGTCTGTTGGAGCCCAAGAAGGAGAAGGAAG...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTATCAAAACGCTCCTaGTCATACACTTCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRLSKRS*SYTSAT Trigger: GGTGGCTGAAGTGTATGACCAGGAGCGTTTTGATAA...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | GCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGCCATCTGCAGGTTGGTaGGCTGCTGCTGCTGGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AKPLCFMVTESQDISMLLPSAGW*AAAAGA Trigger: CGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGG...CAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCATCTCTGGCCGTTCTaGCTCAGGAAACAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGQSAWSQGHTTVNTLQNHLWPF*LRKQLL Trigger: GAGGAGCTGTTTCCTGAGTCAGAACGGCCAGAGATG...GTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GTACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATAGCTGCTGCTGCTGGTaGGCGATGGTCTGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLHEGKALMLHGNGVPGHSCCCW*AMVCFT Trigger: GGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCT...ATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGTTGGTGAGCTGCTGCTaGTGGTGCGCGATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRLVSCC*WCAMVC Trigger: ACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAA...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCTTGGTGAGCTGCTGCTaGTGGTGCGCGATGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHEGKALMLHGNGVPGHILVSCC*WCAMVC Trigger: ACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAA...GATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGGTCACTGCTGCCATCTaGAGGTTGGTGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRVTAAI*RLVSCC Trigger: GCAGCAGCTCACCAACCTGCAGATGGCAGCAGTGAC...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAGACCCTCCTCCTTGTTaGCCATTGACCTGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQDPPPC*PLTWRA Trigger: AGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTC...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGGTTCATGGAGGACACAGCATCCTGGGACGACTGGGCCTTCTCATATTGCTGCTGGTGCGCGATaGTCTGTTTCACCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWRTQHPGTTGPSHIAAGAR*SVSPAH Trigger: GTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGC...AATATGAGAAGGCCCAGTCGTCCCAGGATGCTGTGTCCTCCATGAACCTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCGCTGCTGGTGCGCGATaGTCTGTTTCACCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: INALDGAKGSKGLANSVFAAGAR*SVSPAH Trigger: GTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGC...GAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACGTCATCGATGTCCTTaGGGTCCACCATGTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTRHRCP*GPPCFG Trigger: TCCGAAACATGGTGGACCCCAAGGACATCGATGACG...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| 3UTR CAA 72 bp | AGCCCTAGCTTCCTCAGCCAGCTGATCTATGATGGGTaGGGCTTGTCCAATGTTGCTGGGTCTTCCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSFLSQLIYDG*GLSNVAGSSHL Trigger: AAGGTGGGAAGACCCAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| 3UTR CAA 72 bp | TCTGTCACCTCTCCCTCCAGGTCGTCATCGATGTCCTaGGGGTCCACCATGTTTCGGAGAACCATCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SVTSPSRSSSMS*GSTMFRRTITV Trigger: TACAGTGATGGTTCTCCGAAACATGGTGGACCCCAAGGACATCGATGACGACCTGGAGGGAGAGGTGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTAGATGCTCTGCTCCATTaGATATTTCTTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLDALLH*IFLGLL Trigger: CAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATC...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGAGCTGCTGCTGCTGGTaGGCGATGGTCTGTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRSCCCW*AMVCFT Trigger: GGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCT...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGGCCAAAAGGTTGGTGAGCTGCTaGTGCTGGTGCGCGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MLHGNGVPGHINALDGAKRLVSC*CWCAMV Trigger: GACCATCGCGCACCAGCAGCAGCAGCTCACCAACCT...TTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAATGCTGCTCCAGCCACTaGTTCCTGAGCTGTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKCCSSH*FLSCNL Trigger: AAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCA...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGCACTGCTGCCCGAGATaGTCATGTGCTCCTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRHCCPR*SCAPAH Trigger: GTGAGCAGGAGCACATGAGCATCTCGGGCAGCAGTG...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGCCATGTGGCGAGCACTaGTGCCCGAGATGCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRPCGEH*CPRCSC Trigger: ACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGG...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACTTTCTGAGTAGCTTTTaGATGACCATGTGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLGRVPGPRDTPRLTLYFLSSF*MTMWRA Trigger: TGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAA...GTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGCCCATTGTCACTGCTaGCATCTGCAGGTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGPRDTPRLTLYKTQRKAHCHC*HLQVGE Trigger: CTCACCAACCTGCAGATGGCAGCAGTGACAATGGGC...CTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | ACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACGAGTCTCTGAGGCCATaGAGAATTCCACAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGWVGQSAWSQGHTTVNESLRP*RIPQKS Trigger: AGATTTTTGTGGAATTCTCCATGGCCTCAGAGACTC...GTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | TACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATAGACCCTCCTCCTTGTTaGCCATTGACCTGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSTKAKPLCFMVTESQDIDPPPC*PLTCPP Trigger: CGGAGGACAGGTCAATGGCCAACAAGGAGGAGGGTC...TATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPVHFPS*WILCPV Trigger: CACAGGGCACAGAATCCATCAAGATGGAAAATGGAC...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
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| CDS-3UTR TCA 90 bp | GGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACATATCAATGCTCTTaGTGGGGCCAAAGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGRVPGPRDTPRLTLYKTYQCS*WGQREQ Trigger: TTGCTCCCTTTGGCCCCATCAAGAGCATTGATATGT...TTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGCATCTCTGGCCGTTCTaGCTCAGGAAACAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRHLWPF*LRKQLL Trigger: GAGGAGCTGTTTCCTGAGTCAGAACGGCCAGAGATG...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCCTTGTGAGTCTCTaGGGCCATGGAGAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRGLVSL*GHGEFH Trigger: GTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCC...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCAGCTTGGTGCCTGTaGTTTGTCCATTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTPAWCL*FVHFPS Trigger: AGATGGAAAATGGACAAAGCACAGGCACCAAGCTGG...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ATAGCCCTTGTGCTTGCCAGTTGTGGGGTCCCGGGCCAGCGTACAAGACTTGATGATGCTCTGCTCCATTaGATATTTCTTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IALVLASCGVPGQRTRLDDALLH*IFLGLL Trigger: CAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATC...ATCAAGTCTTGTACGCTGGCCCGGGACCCCACAACTGGCAAGCACAAGGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTCTTGATGCTCTaGTCCATTGCATATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLTLLML*SIAYFL Trigger: CAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGT...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | TTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCTTTCTGAGTAGCTTTTaGATGACCATGTGGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FMYTTGWVGQSAWSQGHTFLSSF*MTMWRA Trigger: TGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAA...GGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGGTGAGCTGCTGCTGCTaGTGCGCGATGGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKVSCCC*CAMVCF Trigger: GAAACAGACCATCGCGCACCAGCAGCAGCAGCTCAC...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAGATCAAAGAGGTTCATaGAGGACACAGCATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQDQRGS*RTQHPG Trigger: CCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATC...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCGACCCTCCTCCTTGTTaGCCATTGACCTGCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: INALDGAKGSKGLANSVFDPPPC*PLTCIE Trigger: CTCAATGCAGGTCAATGGCCAACAAGGAGGAGGGTC...GAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACACATATCAATGCTCTTaGTGGGGCCAAAGGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGQSAWSQGHTTVNTLQNTYQCS*WGQREQ Trigger: TTGCTCCCTTTGGCCCCATCAAGAGCATTGATATGT...GTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGCCAGTGGTATCTGCATCTTTATGTACACTACAGGGTGGGTTGGGCAGCATCGATTGCAAAGGTaGGAGAGGATCTCCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRASGICIFMYTTGWVGQHRLQR*ERISKA Trigger: GGCTTTGGAGATCCTCTCTCACCTTTGCAATCGATG...CTGCCCAACCCACCCTGTAGTGTACATAAAGATGCAGATACCACTGGCCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS-3UTR TCA 90 bp | TACTCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATACTCCTTGTTGGCCATTaGCCTGCATTGAGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSTKAKPLCFMVTESQDILLVGH*PALRAV Trigger: CACTGCTCTCAATGCAGGTCAATGGCCAACAAGGAG...TATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAGATGCTCTGCTCCATTaGATATTTCTTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVGQSAWSQGHTTVNTLQDALLH*IFLGLL Trigger: CAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATC...TTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTAACACTCTTGATGCTCTaGTCCATTGCATATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLTLLML*SIAYFL Trigger: CAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGT...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGTGCTGCTCCAGCCACTaGTTCCTGAGCTGTAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPGPRDTPRLTLYKTQRKCCSSH*FLSCNL Trigger: AAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCA...CTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGATGCTCATGTGCTCCTaGTCACTCAACATCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGPRDTPRLTLYKTQRKMLMCS*SLNISG Trigger: GCCAGAGATGTTGAGTGAGCAGGAGCACATGAGCAT...CTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAAGCCCATTGTCACTaGTGCCATCTGCAGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRKAHCH*CHLQVG Trigger: ACCAACCTGCAGATGGCAGCAGTGACAATGGGCTTT...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAGTCCAGGAAATGAGGCCAAAGTCACGCGGAGAGGTCGCTGTTATCAAGGATTCTGTGCCCTGTaGAGGTTTCCATTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SASPGNEAKVTRRGRCYQGFCAL*RFPFVS Trigger: GGAGACAAATGGAAACCTCCACAGGGCACAGAATCC...TTGATAACAGCGACCTCTCCGCGTGACTTTGGCCTCATTTCCTGGACTTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| 3UTR CAA 72 bp | AGCTTCCTCAGCCAGCTGATCTATGATGGGTTGGGCTaGTCCAATGTTGCTGGGTCTTCCCACCTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSQLIYDGLG*SNVAGSSHLDV Trigger: AACATCAAGGTGGGAAGACCCAGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| 3UTR CAA 72 bp | TTGCCAGTTGTGGGGTCCCGGGCCAGCGTACAAGACTaGATCTTGCCAAAGGCTTCAAATACACTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPVVGSRASVQD*ILPKASNTLLM Trigger: CATCAAGAGTGTATTTGAAGCCTTTGGCAAGATCAAGTCTTGTACGCTGGCCCGGGACCCCACAACTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | GGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCTCACCAGCACACTCTTaGTGCTCTGCTCCATTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHTTVNTLQNPKEGRGKCSPAHS*CSAPLH Trigger: ATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGA...GCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | TCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCTCCAGCTTGGTGCCTGTaGTTTGTCCATTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SMLLMGPKGAKAWRIVSSPAWCL*FVHFPS Trigger: AGATGGAAAATGGACAAAGCACAGGCACCAAGCTGG...AGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGCCCGAGATGCTCATGTaGTCCTGCTCACTCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKPEMLM*SCSLNI Trigger: GATGTTGAGTGAGCAGGAGCACATGAGCATCTCGGG...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CCA 90 bp | GGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCCCATTGCATATTTCTTaGCCTTCTGGAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHTTVNTLQNPKEGRGKCPLHIS*PSGGPP Trigger: AGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGG...GCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCACGCGGAGAGGTCGCTGTTATCAAAACGCTCCTGGTCATACACTTCACCATTGCATATTTCTTaGCCTTCTGGAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSHAERSLLSKRSWSYTSPLHIS*PSGGPP Trigger: AGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGG...TGAAGTGTATGACCAGGAGCGTTTTGATAACAGCGACCTCTCCGCGTGACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CCA 90 bp | TCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCACCATTGCATATTTCTTaGCCTTCTGGAGGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STKAKPLCFMVTESQDISPLHIS*PSGGPP Trigger: AGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGG...TGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGTGAGCTGCTGCTGCTaGTGCGCGATGGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KALMLHGNGVPGHINALDVSCCC*CAMVCF Trigger: GAAACAGACCATCGCGCACCAGCAGCAGCAGCTCAC...ATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CCA 90 bp | TGCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGAGAGTCTCTGAGGCCATaGAGAATTCCACAAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CIFMYTTGWVGQSAWSQGESLRP*RIPQKS Trigger: AGATTTTTGTGGAATTCTCCATGGCCTCAGAGACTC...TCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR GCA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGCCAGCTTGGTGCCTGTaGTTTGTCCATTTTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRPAWCL*FVHFPS Trigger: AGATGGAAAATGGACAAAGCACAGGCACCAAGCTGG...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR GCA 90 bp | ACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGTGTTGGCCATTGACCTaGATTGAGAGCAGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAKPLCFMVTESQDISMCWPLT*IESSAR Trigger: TCTGGCACTGCTCTCAATGCAGGTCAATGGCCAACA...CATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS-3UTR CCA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGGGATTCTGTGCCCTGTaGAGGTTTCCATTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKGFCAL*RFPFVS Trigger: GGAGACAAATGGAAACCTCCACAGGGCACAGAATCC...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGGCCAAAGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MLHGNGVPGHINALDGAKVHFPS*WILCPV Trigger: CACAGGGCACAGAATCCATCAAGATGGAAAATGGAC...TTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGGATGCTCTGCTCCATTaGATATTTCTTGGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKPLCFMVTESQDISMLLDALLH*IFLGLL Trigger: CAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATC...CAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGACACTCTTGATGCTCTaGTCCATTGCATATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALMLHGNGVPGHINALDGTLLML*SIAYFL Trigger: CAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGT...CCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAACACTCTTGATGCTCTaGTCCATTGCATATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STKAKPLCFMVTESQDISTLLML*SIAYFL Trigger: CAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGT...TGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS TCA 90 bp | GGCTCCGACCCTCCTCCTTGTTGGCCATTGACCTGTCCTCCGAGCTaGGGGCCGCCCCCTGGCCGCGAGGGACTCACTTACGAGAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSDPPPCWPLTCPPS*GPPPGREGLTYESY Trigger: ATAGCTCTCGTAAGTGAGTCCCTCGCGGCCAGGGGGCGGCCCTCAGCTCGGAGGACAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | ACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTACCTTGTGCTTGCCAGTaGTGGGGTCCCGGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TLQGGLGRVPGPRDTPRLPCACQ*WGPGPA Trigger: CGCTGGCCCGGGACCCCACAACTGGCAAGCACAAGG...TAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGCCAAACCAGCGCCCATaGAGGGCCTGGATGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRPNQRP*RAWMAL Trigger: CAAGGCCATCCAGGCCCTCAATGGGCGCTGGTTTGG...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACCCTTGTGCTTGCCAGTaGTGGGGTCCCGGGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDPCACQ*WGPGPA Trigger: CGCTGGCCCGGGACCCCACAACTGGCAAGCACAAGG...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | CTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTGGGTCTTCCCACCTaGATGTTCCTGCCCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQGGLGRVPGPRDTPRLTLGLPT*MFLPPS Trigger: GCTTGGGGGCAGGAACATCAAGGTGGGAAGACCCAG...TGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTGGGCTTGTCCAATGTaGCTGGGTCTTCCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRWACPM*LGLPTL Trigger: CAAGGTGGGAAGACCCAGCAACATTGGACAAGCCCA...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS TCA 90 bp | TGCTGCTGGCTCCGACCCTCCTCCTTGTTGGCCATTGACCTGCATTaGGAGCAGTGCCAGACCCCAAGAATAGGACTGGCTGAAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: CCWLRPSSLLAIDLH*EQCQTPRIGLAEGR Trigger: GCGTCCTTCAGCCAGTCCTATTCTTGGGGTCTGGCACTGCTCTCAATGCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS GCA 90 bp | CTCATAGTAGATGGAGCCCACATAGACCCGGCACATGATAGCCAGTaGCCGCTGCCGTTGAGCTGCCATCTGCAGGTTGGTGAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIVDGAHIDPAHDSQ*PLPLSCHLQVGELL Trigger: CAGCAGCTCACCAACCTGCAGATGGCAGCTCAACGGCAGCGGGCACTGGCTATCATGTGCCGGGTCTATGTGGGCTCCATCTACTATGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002599.11 |
||
| CDS-3UTR CAA 90 bp | TGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAACAGTGCCCGCTGCCGTaGAGCTGCCATCTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WVGQSAWSQGHTTVNTLQQCPLP*SCHLQV Trigger: AACCTGCAGATGGCAGCTCAACGGCAGCGGGCACTG...TTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | TACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTTGTGGAGGTTTCCATTaGTCTCCTGCTGCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: YTTGWVGQSAWSQGHTTVCGGFH*SPAATT Trigger: AGTGGTGGCAGCAGGAGACAAATGGAAACCTCCACA...AACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTGACATATCAATGCTCTaGATGGGGCCAAAGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHYRVGWAECLVPGTHHGDISML*MGPKGA Trigger: TGCTCCCTTTGGCCCCATCAAGAGCATTGATATGTC...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACTGGGTCTTCCCACCTaGATGTTCCTGCCCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTLGLPT*MFLPPS Trigger: GCTTGGGGGCAGGAACATCAAGGTGGGAAGACCCAG...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTATGATGGGTTGGGCTaGTCCAATGTTGCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRYDGLG*SNVAGS Trigger: AGACCCAGCAACATTGGACAAGCCCAACCCATCATA...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACAACTTCAGCCACCACCTaGCGACCACCAAACCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTTSATT*RPPNQR Trigger: GCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGT...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACCTCCTTGTTGGCCATaGACCTGGAGAGCTATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GWVGQSAWSQGHTTVNTLPPCWP*TWRAIV Trigger: GACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGG...TAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAACTCCGACCCTCCTCCTaGTTGGCCATTGACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQLRPSS*LAIDLE Trigger: CTCCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAG...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | ATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCTCCCCTCCGACCCTCCTCCTaGTTGGCCATTGACCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: MLLMGPKGAKAWRIVSSPLRPSS*LAIDLH Trigger: ATGCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAG...GGGAGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS TCA 90 bp | GCTGCTGCTGCTGGTGCGCGATGGTCTGTTTCACCAGCACACTCTTaGTGCTCTGCTCCATTGCATATTTCTTGGCCTTCTGGAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAGARWSVSPAHS*CSAPLHISWPSGGP Trigger: AGGCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGCAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS GCA 90 bp | TGCTGGTGCGCGATGGTCTGTTTCACCAGCACACTCTTGATGCTCTaGTCCATTGCATATTTCTTGGCCTTCTGGAGGGCCTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CWCAMVCFTSTLLML*SIAYFLAFWRASCC Trigger: GCAGCAGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCGCGCACCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGCGACCCTCCTCCTTGTaGGCCATTGACCTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRRPSSL*AIDLES Trigger: GCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCG...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTCTTGGTGCCTGTGCTTaGTCCATTTTCCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHYRVGWAECLVPGTHHGLGACA*SIFHLD Trigger: ATCAAGATGGAAAATGGACAAAGCACAGGCACCAAG...ACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGCTTGGTGCCTGTGCTTaGTCCATTTTCCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRLGACA*SIFHLD Trigger: ATCAAGATGGAAAATGGACAAAGCACAGGCACCAAG...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACTCCATTGCATATTTCTaGGCCTTCTGGAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDSIAYF*AFWRAS Trigger: GGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGA...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | AGCATCCTGGGACGACTGGGCCTTCTCATATTCGATAAAACCATAGCCCTTGTGCAGTGCCCGCTGCCGTaGAGCTGCCATCTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SILGRLGLLIFDKTIALVQCPLP*SCHLQV Trigger: AACCTGCAGATGGCAGCTCAACGGCAGCGGGCACTG...CACAAGGGCTATGGTTTTATCGAATATGAGAAGGCCCAGTCGTCCCAGGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | TCCACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCACAGTGCCCGCTGCCGTaGAGCTGCCATCTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: STKAKPLCFMVTESQDISQCPLP*SCHLQV Trigger: AACCTGCAGATGGCAGCTCAACGGCAGCGGGCACTG...TGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACTGGGCTTGTCCAATGTaGCTGGGTCTTCCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFMYTTGWVGQSAWSQGHWACPM*LGLPTL Trigger: CAAGGTGGGAAGACCCAGCAACATTGGACAAGCCCA...GTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAACCTCCTTGTTGGCCATaGACCTGGAGAGCTATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: WVGQSAWSQGHTTVNTLQPPCWP*TWRAIV Trigger: GACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGG...TTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGCGACCCTCCTCCTTGTaGGCCATTGACCTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRRPSSL*AIDLES Trigger: GCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCG...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACATGTGGAGGTTTCCATTaGTCTCCTGCTGCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLCTLQGGLGRVPGPRDTCGGFH*SPAATT Trigger: AGTGGTGGCAGCAGGAGACAAATGGAAACCTCCACA...TGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGATCCATTGCATATTTCTaGGCCTTCTGGAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CIFMYTTGWVGQSAWSQGSIAYF*AFWRAS Trigger: GGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGA...TCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCGAGAATGGGGTTCACTACTCCCACAGAGGGGATGGTGACCGGAATAGGATTCACCAGCACACTCTaGATGCTCTGCTCCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LARMGFTTPTEGMVTGIGFTSTL*MLCSIA Trigger: TGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAA...TCCTATTCCGGTCACCATCCCCTCTGTGGGAGTAGTGAACCCCATTCTCGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACGCCAGCGTACAAGACTaGATCTTGCCAAAGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDASVQD*ILPKAS Trigger: TGAAGCCTTTGGCAAGATCAAGTCTTGTACGCTGGC...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAATCGTCATCGATGTCCTaGGGGTCCACCATGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQSSSMS*GSTMFR Trigger: CCGAAACATGGTGGACCCCAAGGACATCGATGACGA...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGACTTCAGCCACCACCTaGCGACCACCAAACCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRTSATT*RPPNQR Trigger: GCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGT...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS TCA 90 bp | GAGGCAGCCCCAGCTTGGTGCCTGTGCTTTGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTGGAGGTTTCCATTTGTCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EAAPAWCLCFVHFPS*WILCPVEVSICLLL Trigger: CAGCAGGAGACAAATGGAAACCTCCACAGGGCACAGAATCCATCAAGATGGAAAATGGACAAAGCACAGGCACCAAGCTGGGGCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAATGTGGAGGTTTCCATTaGTCTCCTGCTGCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQCGGFH*SPAATT Trigger: AGTGGTGGCAGCAGGAGACAAATGGAAACCTCCACA...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGAGACATATCAATGCTCTaGATGGGGCCAAAGGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CIFMYTTGWVGQSAWSQGDISML*MGPKGA Trigger: TGCTCCCTTTGGCCCCATCAAGAGCATTGATATGTC...TCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACCTGATCTATGATGGGTaGGGCTTGTCCAATGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDLIYDG*GLSNVA Trigger: AGCAACATTGGACAAGCCCAACCCATCATAGATCAG...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGGTACAAGACTTGATCTaGCCAAAGGCTTCAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: CTLQGGLGRVPGPRDTPRVQDLI*PKASNT Trigger: TGTATTTGAAGCCTTTGGCAAGATCAAGTCTTGTAC...CCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAGCCAGCGTACAAGACTaGATCTTGCCAAAGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPASVQD*ILPKAS Trigger: TGAAGCCTTTGGCAAGATCAAGTCTTGTACGCTGGC...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGCTCCGACCCTCCTCCTaGTTGGCCATTGACCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKPLCFMVTESQDISMLLLRPSS*LAIDLS Trigger: GGACAGGTCAATGGCCAACAAGGAGGAGGGTCGGAG...CAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | ATCAATGCTCTTGATGGGGCCAAAGGGAGCAAAGGCCTGGCGAATAGTGTCTTCTGTGGAGGTTTCCATTaGTCTCCTGCTGCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: INALDGAKGSKGLANSVFCGGFH*SPAATT Trigger: AGTGGTGGCAGCAGGAGACAAATGGAAACCTCCACA...GAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | CTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGGCCAAAGGGTCCATTGCATATTTCTaGGCCTTCTGGAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHGNGVPGHINALDGAKGSIAYF*AFWRAS Trigger: GGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGA...CCCTTTGGCCCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGTATGATGGGTTGGGCTaGTCCAATGTTGCTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVPGPRDTPRLTLYKTQRYDGLG*SNVAGS Trigger: AGACCCAGCAACATTGGACAAGCCCAACCCATCATA...CCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAACTGATCTATGATGGGTaGGGCTTGTCCAATGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRVPGPRDTPRLTLYKTQLIYDG*GLSNVA Trigger: AGCAACATTGGACAAGCCCAACCCATCATAGATCAG...TTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GCATCTTTATGTACACTACAGGGTGGGTTGGGCAGAGTGCCTGGTCCCAGGGACGCTTCAAATACACTCTaGATGTCATCATCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLCTLQGGLGRVPGPRDASNTL*MSSSDR Trigger: CCTGTCTGATGATGACATCAAGAGTGTATTTGAAGC...GTCCCTGGGACCAGGCACTCTGCCCAACCCACCCTGTAGTGTACATAAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGTCGTCATCGATGTCCTaGGGGTCCACCATGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKSSSMS*GSTMFR Trigger: CCGAAACATGGTGGACCCCAAGGACATCGATGACGA...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTTCCATTGCATATTTCTaGGCCTTCTGGAGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKALMLHGNGVPGHINALSIAYF*AFWRAS Trigger: GGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGA...AAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGTTCACCAGCACACTCTaGATGCTCTGCTCCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRFTSTL*MLCSIA Trigger: TGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAA...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCATTCGCCCTGTTTTTCTaGATAGATAATGACCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQSAWSQGHTTVNTLQNPFALFF*IDNDPV Trigger: AACCGGGTCATTATCTATCAAGAAAAACAGGGCGAA...TGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | AGTGCAAGTCCAGGAAATGAGGCCAAAGTCACGCGGAGAGGTCGCTGTTATCAACTTGGTGCCTGTGCTTaGTCCATTTTCCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SASPGNEAKVTRRGRCYQLGACA*SIFHLD Trigger: ATCAAGATGGAAAATGGACAAAGCACAGGCACCAAG...TTGATAACAGCGACCTCTCCGCGTGACTTTGGCCTCATTTCCTGGACTTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | CACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGGGCAAGTGCAAGTTCACCAGCACACTCTaGATGCTCTGCTCCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HTTVNTLQNPKEGRGKCKFTSTL*MLCSIA Trigger: TGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAA...CTTGCACTTGCCCCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 |
||
| CDS-3UTR CAA 90 bp | ACGAAGGCAAAGCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGTTCACCAGCACACTCTaGATGCTCTGCTCCATTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TKAKPLCFMVTESQDISMFTSTL*MLCSIA Trigger: TGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAA...CATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTTATGCTTCATGGTAACGGAGTCCCAGGACATATCAATGCTCTTGATGGGCTTGGTGCCTGTGCTTaGTCCATTTTCCATCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ALMLHGNGVPGHINALDGLGACA*SIFHLD Trigger: ATCAAGATGGAAAATGGACAAAGCACAGGCACCAAG...CCCATCAAGAGCATTGATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGCTTCAAATACACTCTaGATGTCATCATCAGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPGPRDTPRLTLYKTQRKASNTL*MSSSDR Trigger: CCTGTCTGATGATGACATCAAGAGTGTATTTGAAGC...CTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCAGAGTGCCTGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACGTACAAGACTTGATCTaGCCAAAGGCTTCAAATACA | + |
|
Preference number: 5 (lower is better) Translates to: VGQSAWSQGHTTVNTLQNVQDLI*PKASNT Trigger: TGTATTTGAAGCCTTTGGCAAGATCAAGTCTTGTAC...GTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCAGGCACTCTGCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS-3UTR CAA 90 bp | TGGTCCCAGGGACACACCACGGTTAACACTTTACAAAACCCAAAGGAAGGAAGGTTCGCCCTGTTTTTCTaGATAGATAATGACCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WSQGHTTVNTLQNPKEGRFALFF*IDNDPV Trigger: AACCGGGTCATTATCTATCAAGAAAAACAGGGCGAA...CCTTCCTTCCTTTGGGTTTTGTAAAGTGTTAACCGTGGTGTGTCCCTGGGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS TCA 72 bp | CTGCTGCTGGCTCCGACCCTCCTCCTTGTTGGCCATTaGCCTGTCCTCCGAGCTGAGGGCCGCCCCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLAPTLLLVGH*PVLRAEGRPLA Trigger: GGCCAGGGGGCGGCCCTCAGCTCGGAGGACAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS CAA 72 bp | CGCTGCAGCCGCTGCTGCTGGCTCCGACCCTCCTCCTaGTTGGCCATTGACCTGTCCTCCGAGCTGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RCSRCCWLRPSS*LAIDLSSELRA Trigger: GGCCCTCAGCTCGGAGGACAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS TCA 72 bp | CCTCCTCCTTGTTGGCCATTGACCTGTCCTCCGAGCTaGGGGCCGCCCCCTGGCCGCGAGGGACTCACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PPPCWPLTCPPS*GPPPGREGLTY Trigger: GTAAGTGAGTCCCTCGCGGCCAGGGGGCGGCCCTCAGCTCGGAGGACAGGTCAATGGCCAACAAGGAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227316.2 |
||
| CDS CCA 72 bp | GCAGCCGCTGCTGCTGGCTCCGACCCTCCTCCTTGTTaGCCATTGACCTGGAGAGCTATAGTCGCCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAGSDPPPC*PLTWRAIVAVA Trigger: GGCGACGGCGACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS CCA 72 bp | GCAGCCGCTGCTGCTGGCTCCGACCCTCCTCCTTGTTaGCCATTGACCTGCATTGAGAGCAGTGCCAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAGSDPPPC*PLTCIESSARP Trigger: GGGTCTGGCACTGCTCTCAATGCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS CAA 72 bp | TGCAGCCGCTGCTGCTGGCTCCGACCCTCCTCCTTGTaGGCCATTGACCTGGAGAGCTATAGTCGCCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRCCWLRPSSL*AIDLESYSRRR Trigger: GCGACGGCGACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS CAA 72 bp | CGCTGCAGCCGCTGCTGCTGGCTCCGACCCTCCTCCTaGTTGGCCATTGACCTGGAGAGCTATAGTCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RCSRCCWLRPSS*LAIDLESYSRR Trigger: ACGGCGACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGGCTGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 |
||
| CDS GCA 72 bp | ATTGCATATTTCTTGGCCTTCTGGAGGGCCTCCTGCTaGTCGGGCGTCAGGGGAGGCAGCCCCAGCTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IAYFLAFWRASC*SGVRGGSPSLV Trigger: CACCAAGCTGGGGCTGCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTCCAGAAGGCCAAGAAATATGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS GCA 72 bp | GATGGAGCCCACATAGACCCGGCACATGATAGCCAGTaGCCGCTGCCGTTGAGCTGCCATCTGCAGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DGAHIDPAHDSQ*PLPLSCHLQVG Trigger: ACCAACCTGCAGATGGCAGCTCAACGGCAGCGGGCACTGGCTATCATGTGCCGGGTCTATGTGGGCTCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002599.11 ENSMUST00000227316.2 ENSMUST00000230924.2 |
||
| CDS GCA 72 bp | GTCACTGCTGCCATCTGCAGGTTGGTGAGCTGCTGCTaGTGGTGCGCGATGGTCTGTTTCACCAGCACACTC | + |
|
Preference number: 6 (lower is better) Translates to: VTAAICRLVSCC*WCAMVCFTSTL Trigger: GAGTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGGCAGCAGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS GCA 72 bp | GATGGAGCCCACATAGACCCGGCACATGATAGCCAGTaGCCGCTGCCGTTGAGCTGCCATCGATTGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DGAHIDPAHDSQ*PLPLSCHRLQR Trigger: CCTTTGCAATCGATGGCAGCTCAACGGCAGCGGGCACTGGCTATCATGTGCCGGGTCTATGTGGGCTCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
||
| CDS CAA 72 bp | GCTGCTGCTGGCTCCGACCCTCCTCCTTGTTGGCCATaGACCTGCATTGAGAGCAGTGCCAGACCCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAAGSDPPPCWP*TCIESSARPQE Trigger: TTCTTGGGGTCTGGCACTGCTCTCAATGCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS TCA 72 bp | CTGCTGCTGGCTCCGACCCTCCTCCTTGTTGGCCATTaGCCTGCATTGAGAGCAGTGCCAGACCCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLLAPTLLLVGH*PALRAVPDPKN Trigger: ATTCTTGGGGTCTGGCACTGCTCTCAATGCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230924.2 |
||
| CDS TCA 72 bp | TGCCCGCTGCCGTTGAGCTGCCATCGATTGCAAAGGTaGGAGAGGATCTCCAAAGCCCATTGTCACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CPLPLSCHRLQR*ERISKAHCHCC Trigger: GCAGCAGTGACAATGGGCTTTGGAGATCCTCTCTCACCTTTGCAATCGATGGCAGCTCAACGGCAGCGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100527.13 |
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| CDS CAA 90 bp | AGCTGCTGCTGCTGGTGCGCGATGGTCTGTTTCACCAGCACACTCTaGATGCTCTGCTCCATTGCATATTTCTTGGCCTTCTGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SCCCWCAMVCFTSTL*MLCSIAYFLAFWRA Trigger: GGCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCGCGCACCAGCAGCAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS CAA 90 bp | GGAGGCAGCCCCAGCTTGGTGCCTGTGCTTTGTCCATTTTCCATCTaGATGGATTCTGTGCCCTGTGGAGGTTTCCATTTGTCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGSPSLVPVLCPFSI*MDSVPCGGFHLSPA Trigger: AGCAGGAGACAAATGGAAACCTCCACAGGGCACAGAATCCATCAAGATGGAAAATGGACAAAGCACAGGCACCAAGCTGGGGCTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS GCA 72 bp | CTGTTTCACCAGCACACTCTTGATGCTCTGCTCCATTaGATATTTCTTGGCCTTCTGGAGGGCCTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LFHQHTLDALLH*IFLGLLEGLLL Trigger: CAGCAGGAGGCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS GCA 72 bp | GCGATGGTCTGTTTCACCAGCACACTCTTGATGCTCTaGTCCATTGCATATTTCTTGGCCTTCTGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AMVCFTSTLLML*SIAYFLAFWRA Trigger: GGCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS CAA 72 bp | TGCTGGTGCGCGATGGTCTGTTTCACCAGCACACTCTaGATGCTCTGCTCCATTGCATATTTCTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CWCAMVCFTSTL*MLCSIAYFLAF Trigger: GAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCGCGCACCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS CAA 72 bp | CCCAGCTTGGTGCCTGTGCTTTGTCCATTTTCCATCTaGATGGATTCTGTGCCCTGTGGAGGTTTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: PSLVPVLCPFSI*MDSVPCGGFHL Trigger: CAAATGGAAACCTCCACAGGGCACAGAATCCATCAAGATGGAAAATGGACAAAGCACAGGCACCAAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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| CDS TCA 72 bp | CCAGCTTGGTGCCTGTGCTTTGTCCATTTTCCATCTTaGTGGATTCTGTGCCCTGTGGAGGTTTCCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: PAWCLCFVHFPS*WILCPVEVSIC Trigger: ACAAATGGAAACCTCCACAGGGCACAGAATCCATCAAGATGGAAAATGGACAAAGCACAGGCACCAAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002599.11 ENSMUST00000100527.13 ENSMUST00000227316.2 ENSMUST00000230924.2 |
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