Pregenerated sensors for PTX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044172Ensembl transcript IDs: ENSMUST00000054930.7, ENSMUST00000232902.2, ENSMUST00000233502.2, ENSMUST00000233641.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCCCAGCACAAGCGACCCTCCGGGAGGGATCTCATAGCCCTCTCTaGAGCGGGAGCCGGTGGCTACTAACCTTCGGTCTATGTGGAGCC | + |
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Preference number: 1 (lower is better) Translates to: GPAQATLREGSHSPL*SGSRWLLTFGLCGA Trigger: GGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCTCCCGCTTCAGAGAGGGCTATGAGATCCCTCCCGGAGGGTCGCTTGTGCTGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR TCA 90 bp | TGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTaGAGTCTGGGTCCCCAATCACAAAGTGGATGGAACCAGGGACCA | + |
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Preference number: 1 (lower is better) Translates to: CGATGHPGVVSGTVP*SLGPQSQSGWNQGP Trigger: TGGTCCCTGGTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR GCA 90 bp | GAGCTCTTTTCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTaGCCGGTCCCAGATGGCCAAGCCAGATATGCTCCCTACGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ELFSRGQVCNFSREQ*PVPDGQARYAPYEG Trigger: GCCTTCGTAGGGAGCATATCTGGCTTGGCCATCTGGGACCGGGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGAAAAGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | CCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTaGGTCCCCAATCACAAAGTGGATGGAACCAGGGACCAGGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: PLAIQEWFQGQFPEV*VPNHKVDGTRDQGV Trigger: AACTCCCTGGTCCCTGGTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | TGGAGCCAGTACTTGCCCTCCACGGATGTCCAGATGATACAAATGTaGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: WSQYLPSTDVQMIQM*CHWPSRSGFRDSSL Trigger: CAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | CCCTCTCTGAAGCGGGAGCCGGTGGCTACTAACCTTCGGTCTATGTaGAGCCAGTACTTGCCCTCCACGGATGTCCAGATGATACAAATG | + |
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Preference number: 1 (lower is better) Translates to: PSLKREPVATNLRSM*SQYLPSTDVQMIQM Trigger: CATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCTCCCGCTTCAGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR TCA 90 bp | TTCGGTCTATGTGGAGCCAGTACTTGCCCTCCACGGATGTCCAGATaGTACAAATGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FGLCGASTCPPRMSR*YKCGATGHPGVVSG Trigger: CCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | GGTTTCAGGGACAGTTCCCTGAAGTCTGGGTCCCCAATCACAAAGTaGATGGAACCAGGGACCAGGGAGTTTCGGCCATGCAGTACTAAC | + |
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Preference number: 1 (lower is better) Translates to: GFRDSSLKSGSPITK*MEPGTREFRPCSTN Trigger: GTTAGTACTGCATGGCCGAAACTCCCTGGTCCCTGGTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR GCA 90 bp | GTACTAACTTGTTGTCATTGTCTTTGGTGGCATAGGAAAGGAGGGTaGCCAGGTGGCTGGTGGCCATTCGGACCCAACTGCAGAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: VLTCCHCLWWHRKGG*PGGWWPFGPNCRRT Trigger: TGTCCTTCTGCAGTTGGGTCCGAATGGCCACCAGCCACCTGGGCACCCTCCTTTCCTATGCCACCAAAGACAATGACAACAAGTTAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | TGGGTCCGTGTTGCAAATGTTTCCTGGTCCTTGGTAGGTCCTTGGTaGGGCTGCTTGATGACTGCTTGGGGTTTGGAACTTCTGCATCTC | + |
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Preference number: 1 (lower is better) Translates to: WVRVANVSWSLVGPW*GCLMTAWGLELLHL Trigger: GAGATGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCTACCAAGGACCAGGAAACATTTGCAACACGGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | CACTGGGTCCGTGTTGCAAATGTTTCCTGGTCCTTGGTAGGTCCTTaGTGGGGCTGCTTGATGACTGCTTGGGGTTTGGAACTTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: HWVRVANVSWSLVGP*WGCLMTAWGLELLH Trigger: ATGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCTACCAAGGACCAGGAAACATTTGCAACACGGACCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR CCA 90 bp | TCCACCCACAGAAGTGACATTGGTCAGCGTCAGAATAGCGCCTGTTaGGAGCTCTTTTCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: STHRSDIGQRQNSAC*ELFSRGQVCNFSRE Trigger: CTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGAAAAGAGCTCCCAACAGGCGCTATTCTGACGCTGACCAATGTCACTTCTGTGGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR GCA 90 bp | GGTGTGGCATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTaGACAAATCCACCCACAGAAGTGACATTGGTCAGCGTCAGAATA | + |
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Preference number: 1 (lower is better) Translates to: GVAYGHCSRQVHLAL*TNPPTEVTLVSVRI Trigger: TATTCTGACGCTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGTGGCTACTAACCTTCGGTCTATGTGGAGCCAGTACTTGCCCTCCACGGCATAGGAAAGGAGGGTaGCCAGGTGGCTGGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SRWLLTFGLCGASTCPPRHRKGG*PGGWWP Trigger: TGGCCACCAGCCACCTGGGCACCCTCCTTTCCTATG...CCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAGGGAGCAGTGCCCGGTCCCAGATGGCCAAGCCAGATATGCTCCCTACGCCATTCGGACCCAACTaGAGAAGGACAGGGCTCGTA | + |
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Preference number: 2 (lower is better) Translates to: SLGSSARSQMAKPDMLPTPFGPN*RRTGLV Trigger: TACGAGCCCTGTCCTTCTGCAGTTGGGTCCGAATGG...CGTAGGGAGCATATCTGGCTTGGCCATCTGGGACCGGGCACTGCTCCCTAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTGCCCGGTCCCAGATGGCCCATTCGGACCCAACTaGAGAAGGACAGGGCTCGTA | + |
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Preference number: 2 (lower is better) Translates to: SRGQVCNFSREQCPVPDGPFGPN*RRTGLV Trigger: TACGAGCCCTGTCCTTCTGCAGTTGGGTCCGAATGG...GCCATCTGGGACCGGGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGCATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCGGGTGCCCAGGTGGCTaGTGGCCATTCGGACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VWHMDTAPGRYIWLSAQIGCPGG*WPFGPN Trigger: GTTGGGTCCGAATGGCCACCAGCCACCTGGGCACCC...GATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGTGTCTTGTTCCTGGCCCAGCACAAGCGACCCTCCGGGAGGGATCTCTGTCATTGTCTTTGGTaGCATAGGAAAGGAGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PHSVLFLAQHKRPSGRDLCHCLW*HRKGGC Trigger: GCACCCTCCTTTCCTATGCCACCAAAGACAATGACA...GAGATCCCTCCCGGAGGGTCGCTTGTGCTGGGCCAGGAACAAGACACTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CAA 90 bp | CGGGAGCCGGTGGCTACTAACCTTCGGTCTATGTGGAGCCAGTACTaGCCCTCCACGGATGTCCAGATGATACAAATGTGGTGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: REPVATNLRSMWSQY*PSTDVQMIQMWCHW Trigger: CCAGTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGTGTCTTGTTCCTGGCCCAGCACAAGCGACCCTCCGGGAGGGATCTCATGTCATTGTCTTTGGTaGCATAGGAAAGGAGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PTVSCSWPSTSDPPGGISCHCLW*HRKGGC Trigger: GCACCCTCCTTTCCTATGCCACCAAAGACAATGACA...TGAGATCCCTCCCGGAGGGTCGCTTGTGCTGGGCCAGGAACAAGACACTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR TCA 90 bp | TATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACATCTCATAGCCCTCTCTaGAGCGGGAGCCGGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: YGHCSRQVHLALCTNPPTSHSPL*SGSRWL Trigger: TAGCCACCGGCTCCCGCTTCAGAGAGGGCTATGAGA...TGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CAA 90 bp | GCACTGGGTCCGTGTTGCAAATGTTTCCTGGTCCTTGGTAGGTCCTaGGTGGGGCTGCTTGATGACTGCTTGGGGTTTGGAACTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ALGPCCKCFLVLGRS*VGLLDDCLGFGTSA Trigger: TGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCTACCAAGGACCAGGAAACATTTGCAACACGGACCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR CAA 90 bp | CACAGTCACGGTGTGGCATATGGACACTGCTCCAGGCAGGTACATTaGGCTCTCTGCACAAATCCACCCACAGAAGTGACATTGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: HSHGVAYGHCSRQVH*ALCTNPPTEVTLVS Trigger: GCTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACACCGTGACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTGCACTGGGTCCGTGTTaGAAATGTTTCCTGGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: MWCHWPSRSGFRDSSLKSALGPC*KCFLVL Trigger: AAGGACCAGGAAACATTTGCAACACGGACCCAGTGC...AGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTTGACTGTGTGTGACACAGTCACGGTGTGGCATATGGACACTGCTCCATCCCCAATCACAAAGTaGATGGAACCAGGGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: MALTVCDTVTVWHMDTAPSPITK*MEPGTR Trigger: CCTGGTCCCTGGTTCCATCCACTTTGTGATTGGGGA...TGGAGCAGTGTCCATATGCCACACCGTGACTGTGTCACACACAGTCAAGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCTTGACTGTGTGTGACACAGTCACGGTGTGGCATATGGACACTGCTCCACAGATGATACAAATGTaGTGCCACTGGCCATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: MALTVCDTVTVWHMDTAPQMIQM*CHWPSR Trigger: CCTGGATGGCCAGTGGCACCACATTTGTATCATCTG...TGGAGCAGTGTCCATATGCCACACCGTGACTGTGTCACACACAGTCAAGGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATGGCCTTGACTGTGTGTGACACAGTCACGGTGTGGCATATGGACACTGCTAACCTTCGGTCTATGTaGAGCCAGTACTTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LMALTVCDTVTVWHMDTANLRSM*SQYLPS Trigger: GGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTT...AGCAGTGTCCATATGCCACACCGTGACTGTGTCACACACAGTCAAGGCCATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CAA 90 bp | CAGGTACATTTGGCTCTCTGCACAAATCCACCCACAGAAGTGACATaGGTCAGCGTCAGAATAGCGCCTGTTGGGAGCTCTTTTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QVHLALCTNPPTEVT*VSVRIAPVGSSFPE Trigger: CTCTGGAAAAGAGCTCCCAACAGGCGCTATTCTGACGCTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR GCA 90 bp | CATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCAGGGCTGCTTGATGACTaGTTGGGGTTTGGAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: HMDTAPGRYIWLSAQIHPGLLDD*LGFGTS Trigger: AGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCC...TGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAAATGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGTTGCAAATGTTTCCTaGTCCTTGGTAGGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: DTNVVPLAIQEWFQGQFPVANVS*SLVGPW Trigger: CCAAGGACCTACCAAGGACCAGGAAACATTTGCAAC...AGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACACAGATGATACAAATGTaGTGCCACTGGCCATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YGHCSRQVHLALCTNPPTQMIQM*CHWPSR Trigger: CCTGGATGGCCAGTGGCACCACATTTGTATCATCTG...TGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTACATTTGGCTCTCTGCACAAATCCACCCACAGAAGTGACATTGGTCAGAACCTTCGGTCTATGTaGAGCCAGTACTTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AGTFGSLHKSTHRSDIGQNLRSM*SQYLPS Trigger: GGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTT...CTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACAGAAGTGACATTGGTCCCACGGATGTCCAGATaGTACAAATGTGGTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: RQVHLALCTNPPTEVTLVPRMSR*YKCGAT Trigger: AGTGGCACCACATTTGTATCATCTGGACATCCGTGG...GACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAAATGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTTGTTGTCATTGTCTTTaGTGGCATAGGAAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DTNVVPLAIQEWFQGQFPCCHCL*WHRKGG Trigger: CCCTCCTTTCCTATGCCACCAAAGACAATGACAACA...AGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACAGAAGTGACATTGGTCCAGTTCCCTGAAGTCTaGGTCCCCAATCACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RQVHLALCTNPPTEVTLVQFPEV*VPNHKV Trigger: CACTTTGTGATTGGGGACCCAGACTTCAGGGAACTG...GACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR TCA 72 bp | CAAGCGACCCTCCGGGAGGGATCTCATAGCCCTCTCTaGAGCGGGAGCCGGTGGCTACTAACCTTCGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: QATLREGSHSPL*SGSRWLLTFGL Trigger: TAGACCGAAGGTTAGTAGCCACCGGCTCCCGCTTCAGAGAGGGCTATGAGATCCCTCCCGGAGGGTCGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR GCA 72 bp | TCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTaGCCGGTCCCAGATGGCCAAGCCAGATATGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SRGQVCNFSREQ*PVPDGQARYAP Trigger: GGGAGCATATCTGGCTTGGCCATCTGGGACCGGGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 72 bp | AAGCGGGAGCCGGTGGCTACTAACCTTCGGTCTATGTaGAGCCAGTACTTGCCCTCCACGGATGTCCAGATG | + |
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Preference number: 3 (lower is better) Translates to: KREPVATNLRSM*SQYLPSTDVQM Trigger: CATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCTCCCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 72 bp | GACAGTTCCCTGAAGTCTGGGTCCCCAATCACAAAGTaGATGGAACCAGGGACCAGGGAGTTTCGGCCATGC | + |
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Preference number: 3 (lower is better) Translates to: DSSLKSGSPITK*MEPGTREFRPC Trigger: GCATGGCCGAAACTCCCTGGTCCCTGGTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTGGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTAATGTTTCCTGGTCCTaGGTAGGTCCTTGGTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: MWCHWPSRSGFRDSSLKSNVSWS*VGPWWG Trigger: GCCCCACCAAGGACCTACCAAGGACCAGGAAACATT...AGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGGCATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCGTCCTTGGTAGGTCCTaGGTGGGGCTGCTTGATGAC | + |
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Preference number: 3 (lower is better) Translates to: VWHMDTAPGRYIWLSAQIVLGRS*VGLLDD Trigger: GTCATCAAGCAGCCCCACCAAGGACCTACCAAGGAC...GATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR TCA 72 bp | ACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTaGAGTCTGGGTCCCCAATCACAAAGTGGATGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TGHPGVVSGTVP*SLGPQSQSGWN Trigger: GTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR GCA 72 bp | GTCCTTGGTAGGTCCTTGGTGGGGCTGCTTGATGACTaGTTGGGGTTTGGAACTTCTGCATCTCCTGAACGT | + |
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Preference number: 3 (lower is better) Translates to: VLGRSLVGLLDD*LGFGTSASPER Trigger: ACGTTCAGGAGATGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCTACCAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
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| 3UTR GCA 72 bp | TTGCCCTCCACGGATGTCCAGATGATACAAATGTGGTaGCACTGGCCATCCAGGAGTGGTTTCAGGGACAGT | + |
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Preference number: 3 (lower is better) Translates to: LPSTDVQMIQMW*HWPSRSGFRDS Trigger: ACTGTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
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| 3UTR CCA 72 bp | ATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTaGGTCCCCAATCACAAAGTGGATGGAACCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQEWFQGQFPEV*VPNHKVDGTRD Trigger: GTCCCTGGTTCCATCCACTTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR CCA 72 bp | TACTTGCCCTCCACGGATGTCCAGATGATACAAATGTaGTGCCACTGGCCATCCAGGAGTGGTTTCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: YLPSTDVQMIQM*CHWPSRSGFRD Trigger: GTCCCTGAAACCACTCCTGGATGGCCAGTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCAGGGACCAGGGAGTTTCGGCCATGCAGTACTAACTTGTTGTCATTGTCTCCTTGGTGGGGCTGCTaGATGACTGCTTGGGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: EPGTREFRPCSTNLLSLSPWWGC*MTAWGL Trigger: CAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGG...AGACAATGACAACAAGTTAGTACTGCATGGCCGAAACTCCCTGGTCCCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
||
| 3UTR GCA 72 bp | TGGAGGTGTTGGGGAAAATCAGCACTGGGTCCGTGTTaGAAATGTTTCCTGGTCCTTGGTAGGTCCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: WRCWGKSALGPC*KCFLVLGRSLV Trigger: CACCAAGGACCTACCAAGGACCAGGAAACATTTGCAACACGGACCCAGTGCTGATTTTCCCCAACACCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
||
| 3UTR CCA 72 bp | TTGATGGCCTTGACTGTGTGTGACACAGTCACGGTGTaGCATATGGACACTGCTCCAGGCAGGTACATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LMALTVCDTVTV*HMDTAPGRYIW Trigger: CCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACACCGTGACTGTGTCACACACAGTCAAGGCCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR GCA 72 bp | AATGTTTCCTGGTCCTTGGTAGGTCCTTGGTGGGGCTaGTTGATGACTGCTTGGGGTTTGGAACTTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVSWSLVGPWWG*LMTAWGLELLH Trigger: ATGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCTACCAAGGACCAGGAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
||
| 3UTR GCA 72 bp | TATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTaGACAAATCCACCCACAGAAGTGACATTGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: YGHCSRQVHLAL*TNPPTEVTLVS Trigger: GCTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR GCA 72 bp | AAGTGGATGGAACCAGGGACCAGGGAGTTTCGGCCATaGAGTACTAACTTGTTGTCATTGTCTTTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KWMEPGTREFRP*STNLLSLSLVA Trigger: TGCCACCAAAGACAATGACAACAAGTTAGTACTGCATGGCCGAAACTCCCTGGTCCCTGGTTCCATCCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGGAGCTCTTTTCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTGCCTGCAGTACTAACTTGTaGTCATTGTCTTTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGSSFPEAKFATSLGSSACSTNL*SLSLVA Trigger: TGCCACCAAAGACAATGACAACAAGTTAGTACTGCA...GGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGAAAAGAGCTCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGGAGCTCTTTTCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTGCTGCAGTACTAACTTGTaGTCATTGTCTTTGGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CWELFSRGQVCNFSREQCCSTNL*SLSLVA Trigger: TGCCACCAAAGACAATGACAACAAGTTAGTACTGCA...GCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGAAAAGAGCTCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACCATGCAGTACTAACTaGTTGTCATTGTCTTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HMDTAPGRYIWLSAQIHPPCSTN*LSLSLV Trigger: CACCAAAGACAATGACAACAAGTTAGTACTGCATGG...TGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTGACATTGGTCAGCGTCAGAATAGCGCCTGTTGGGAGCTCTTTTCCAGAGCCATGCAGTACTAACTaGTTGTCATTGTCTTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EVTLVSVRIAPVGSSFPEPCSTN*LSLSLV Trigger: CACCAAAGACAATGACAACAAGTTAGTACTGCATGG...CTCTGGAAAAGAGCTCCCAACAGGCGCTATTCTGACGCTGACCAATGTCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR TCA 90 bp | ATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCACAGCTTTGCCTGGCTGGGTaGGCTTCCTGTGACGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDTAPGRYIWLSAQIHPQLCLAG*ASCDGV Trigger: GACTCCGTCACAGGAAGCTCACCCAGCCAGGCAAAG...CTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233502.2 |
||
| CDS-3UTR CCA 90 bp | CATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCAGAGGGGAACTCCTTCTaGCTCCTTCGCTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMDTAPGRYIWLSAQIHPEGNSF*LLRWLF Trigger: GAAGAGCCAGCGAAGGAGCCAGAAGGAGTTCCCCTC...TGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTGCCCGGTCCCAGATGGCTCAGGGACACAAAAATaGGGAGAAAAAGCAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGQVCNFSREQCPVPDGSGTQK*GEKAGS Trigger: AGACCCTGCTTTTTCTCCTCATTTTTGTGTCCCTGA...GCCATCTGGGACCGGGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233502.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTGGGTCCCCAACCTGTTGGAATCTCTaGAACTGCTCTTCTAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HWPSRSGFRDSSLKSGSPTCWNL*NCSSSR Trigger: TCGACTAGAAGAGCAGTTTCAGAGATTCCAACAGGT...TGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR TCA 90 bp | CACTGGCCATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTGGGTCCCCATTGTTGGCAATGTTCTaGAGGTGTGTTAAGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HWPSRSGFRDSSLKSGSPLLAMF*RCVKVT Trigger: GGTGACCTTAACACACCTTCAGAACATTGCCAACAA...TGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGATGGCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR CCA 90 bp | AGCCGGTGGCTACTAACCTTCGGTCTATGTGGAGCCAGTACTTGCCCTCCACGGCCACATCTCCTTGTATaGCAGCTTGAGACTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRWLLTFGLCGASTCPPRPHLLV*QLETDS Trigger: TGAATCAGTCTCAAGCTGCCATACAAGGAGATGTGG...CCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCACCGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR CAA 72 bp | TTGGCTCTCTGCACAAATCCACCCACAGAAGTGACATaGGTCAGCGTCAGAATAGCGCCTGTTGGGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LALCTNPPTEVT*VSVRIAPVGSS Trigger: AGAGCTCCCAACAGGCGCTATTCTGACGCTGACCAATGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| 3UTR CAA 72 bp | GGTGTGGCATATGGACACTGCTCCAGGCAGGTACATTaGGCTCTCTGCACAAATCCACCCACAGAAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GVAYGHCSRQVH*ALCTNPPTEVT Trigger: TGTCACTTCTGTGGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGCCACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGAGTGGTTTCAGGGACAGTTCCCTGAAGTCTGGGTCCCCAATCACAAACGTGTTGCAAACTTCTaGCTCCTTCGCTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IQEWFQGQFPEVWVPNHKRVANF*LLRWLF Trigger: GAAGAGCCAGCGAAGGAGCCAGAAGTTTGCAACACG...TTTGTGATTGGGGACCCAGACTTCAGGGAACTGTCCCTGAAACCACTCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233502.2 |
||
| 3UTR CAA 72 bp | GTGGCTACTAACCTTCGGTCTATGTGGAGCCAGTACTaGCCCTCCACGGATGTCCAGATGATACAAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VATNLRSMWSQY*PSTDVQMIQMW Trigger: CCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCACATAGACCGAAGGTTAGTAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGCCAGTACTTGCCCTCCACGGATGTCCAGATGATACAAATGTGGTGCCACACCTGTTGGAATCTCTaGAACTGCTCTTCTAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WSQYLPSTDVQMIQMWCHTCWNL*NCSSSR Trigger: TCGACTAGAAGAGCAGTTTCAGAGATTCCAACAGGT...GTGGCACCACATTTGTATCATCTGGACATCCGTGGAGGGCAAGTACTGGCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCCTTGGTGGGGCTGCTTGATGACTGCTTGGGGTTTGGAACTTCTGCATCTCCACATCTCCTTGTATaGCAGCTTGAGACTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSLVGLLDDCLGFGTSASPHLLV*QLETDS Trigger: TGAATCAGTCTCAAGCTGCCATACAAGGAGATGTGG...AGATGCAGAAGTTCCAAACCCCAAGCAGTCATCAAGCAGCCCCACCAAGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233641.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAGCTCTTTTCCAGAGGCCAAGTTTGCAACTTCTCTAGGGAGCAGTGCCAAACATTGTAGTTGTTaGCAATGTTCTGAAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGSSFPEAKFATSLGSSAKHCSC*QCSEGV Trigger: CACACCTTCAGAACATTGCCAACAACTACAATGTTT...GGCACTGCTCCCTAGAGAAGTTGCAAACTTGGCCTCTGGAAAAGAGCTCCCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS-3UTR CCA 90 bp | GCATATGGACACTGCTCCAGGCAGGTACATTTGGCTCTCTGCACAAATCCACCCAAACATTGTAGTTGTTaGCAATGTTCTGAAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYGHCSRQVHLALCTNPPKHCSC*QCSEGV Trigger: CACACCTTCAGAACATTGCCAACAACTACAATGTTT...GGGTGGATTTGTGCAGAGAGCCAAATGTACCTGCCTGGAGCAGTGTCCATATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS CCA 90 bp | GAGGCCCTCTGTGTCTGTCCCTCCAGAGCAGCAAGCCTGGCACCCTaGCTGTGGACTTGCTGTGTAAGGCTGGCCAGTGCATCCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: EALCVCPSRAASLAP*LWTCCVRLASASCS Trigger: ACTACAGGATGCACTGGCCAGCCTTACACAGCAAGTCCACAGCCAGGGTGCCAGGCTTGCTGCTCTGGAGGGACAGACACAGAGGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS TCA 90 bp | CTGTGGACTTGCTGTGTAAGGCTGGCCAGTGCATCCTGTAGTGCCTaGACGCTTAGGGCCAGGCTTGCAATAGCCTCCCTCTGTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWTCCVRLASASCSA*TLRARLAIASLCAF Trigger: AAAGGCACAGAGGGAGGCTATTGCAAGCCTGGCCCTAAGCGTTCAGGCACTACAGGATGCACTGGCCAGCCTTACACAGCAAGTCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS GCA 90 bp | GTGCCTTTTGCTCCCCTTCCTTCTCTACCCACTGCCTGCTCTTTGTaGTCAGGGAGAGGTCCAAGGCTTGAAGTCGGGCATCTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPFAPLPSLPTACSL*SGRGPRLEVGHLPS Trigger: AGAAGGTAGATGCCCGACTTCAAGCCTTGGACCTCTCCCTGAGCACAAAGAGCAGGCAGTGGGTAGAGAAGGAAGGGGAGCAAAAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS CCA 90 bp | GGCTCTTCCTATACCAGGTCTTTAAATGGGCCACATCTCCTTGTATaGCAGCTTGAGACTGATTCATCGCTAGAGCTACGGCTTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSYTRSLNGPHLLV*QLETDSSLELRLGS Trigger: AGAGCCAAGCCGTAGCTCTAGCGATGAATCAGTCTCAAGCTGCCATACAAGGAGATGTGGCCCATTTAAAGACCTGGTATAGGAAGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 ENSMUST00000233502.2 ENSMUST00000233641.2 |
||
| CDS CCA 72 bp | GGCTACCTGGCGGTCCCTCCACAGTTGCAAGGATCCTaGGCCTCGCTGAGCAAGCTGGGTGGGGTTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GYLAVPPQLQGS*ASLSKLGGVGG Trigger: GCCCCCAACCCCACCCAGCTTGCTCAGCGAGGCCCAGGATCCTTGCAACTGTGGAGGGACCGCCAGGTAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS GCA 72 bp | TCCAGAGCAGCAAGCCTGGCACCCTGGCTGTGGACTTaGTGTGTAAGGCTGGCCAGTGCATCCTGTAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRAASLAPWLWT*CVRLASASCSA Trigger: GGCACTACAGGATGCACTGGCCAGCCTTACACAGCAAGTCCACAGCCAGGGTGCCAGGCTTGCTGCTCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS CCA 72 bp | TGTCCCTCCAGAGCAGCAAGCCTGGCACCCTGGCTGTaGACTTGCTGTGTAAGGCTGGCCAGTGCATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CPSRAASLAPWL*TCCVRLASASC Trigger: ACAGGATGCACTGGCCAGCCTTACACAGCAAGTCCACAGCCAGGGTGCCAGGCTTGCTGCTCTGGAGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS CAA 90 bp | CTCTACCCACTGCCTGCTCTTTGTGCTCAGGGAGAGGTCCAAGGCTaGAAGTCGGGCATCTACCTTCTGGCTCCTTCGCTGGCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LYPLPALCAQGEVQG*KSGIYLLAPSLALP Trigger: AGGAAGAGCCAGCGAAGGAGCCAGAAGGTAGATGCCCGACTTCAAGCCTTGGACCTCTCCCTGAGCACAAAGAGCAGGCAGTGGGTAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS TCA 72 bp | TGCTGTGTAAGGCTGGCCAGTGCATCCTGTAGTGCCTaGACGCTTAGGGCCAGGCTTGCAATAGCCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCVRLASASCSA*TLRARLAIASL Trigger: GAGGGAGGCTATTGCAAGCCTGGCCCTAAGCGTTCAGGCACTACAGGATGCACTGGCCAGCCTTACACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS TCA 72 bp | GACAGTGACGTCATGAGGGGAACTCCTGTGTTGGGGTaGAGACTTGGCTACCTGGCGGTCCCTCCACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSDVMRGTPVLG*RLGYLAVPPQL Trigger: CAACTGTGGAGGGACCGCCAGGTAGCCAAGTCTTCACCCCAACACAGGAGTTCCCCTCATGACGTCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS CAA 90 bp | TCTGTGCCTTTTGCTCCCCTTCCTTCTCTACCCACTGCCTGCTCTTaGTGCTCAGGGAGAGGTCCAAGGCTTGAAGTCGGGCATCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: SVPFAPLPSLPTACS*CSGRGPRLEVGHLP Trigger: AGGTAGATGCCCGACTTCAAGCCTTGGACCTCTCCCTGAGCACAAAGAGCAGGCAGTGGGTAGAGAAGGAAGGGGAGCAAAAGGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 |
||
| CDS CCA 72 bp | CACTGGGTCCGTGTTGCAAACTTCTGGCTCCTTCGCTaGCTCTTCCTATACCAGGTCTTTAAATGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HWVRVANFWLLR*LFLYQVFKWAT Trigger: TGTGGCCCATTTAAAGACCTGGTATAGGAAGAGCCAGCGAAGGAGCCAGAAGTTTGCAACACGGACCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233502.2 |
||
| CDS TCA 72 bp | AAATGGCTTTCTTTGCCTGGCTGGGTGAGCTTCCTGTaGCGGAGTCCTGTGTACATTCAGGGACACAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: KWLSLPGWVSFL*RSPVYIQGHKN Trigger: ATTTTTGTGTCCCTGAATGTACACAGGACTCCGTCACAGGAAGCTCACCCAGCCAGGCAAAGAAAGCCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054930.7 ENSMUST00000232902.2 ENSMUST00000233502.2 |
||
| CDS CCA 72 bp | AGCGAACATCCATATTGTGGTAAACATTGTAGTTGTTaGCAATGTTCTGAAGGTGTGTTAAGGTCACCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEHPYCGKHCSC*QCSEGVLRSPV Trigger: AACAGGTGACCTTAACACACCTTCAGAACATTGCCAACAACTACAATGTTTACCACAATATGGATGTTCGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054930.7 ENSMUST00000233502.2 ENSMUST00000233641.2 |
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