Pregenerated sensors for PTTG1IP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009291Ensembl transcript IDs: ENSMUST00000009435.12, ENSMUST00000161789.8, ENSMUST00000162429.8, ENSMUST00000162598.2, ENSMUST00000162943.9
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCTCTCCTCCTGCTCTCTCATGGCCCGCTCATCGCTCTTGTCTaGCTTCCGGCTCTTCTTCCGGCGGCAGCAGTAGCAGCAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: SPLLLLSHGPLIALV*LPALLPAAAVAAAH Trigger: GTGTGCTGCTGCTACTGCTGCCGCCGGAAGAAGAGCCGGAAGCCAGACAAGAGCGATGAGCGGGCCATGAGAGAGCAGGAGGAGAGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161789.8 |
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| 3UTR TCA 90 bp | AGTAGAGGCTGGAGGGATCACCCAGGTCAAGGGTGGCCATGGTGGTaGGGTCTCTGCAGGCTCTGCTGGGGAGTGCATTCCCAGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: SRGWRDHPGQGWPWW*GLCRLCWGVHSQET Trigger: AGTTTCCTGGGAATGCACTCCCCAGCAGAGCCTGCAGAGACCTCACCACCATGGCCACCCTTGACCTGGGTGATCCCTCCAGCCTCTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR GCA 90 bp | GGCACGGGGTGTGATGGTGTCAGGCTTGGTTCTGTGGCTTCATGCTaGTCAAAGGTAGGCACAGACCACTCCCACGAGCACCTGCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: GTGCDGVRLGSVASC*SKVGTDHSHEHLLH Trigger: GTGCAGCAGGTGCTCGTGGGAGTGGTCTGTGCCTACCTTTGAGCAGCATGAAGCCACAGAACCAAGCCTGACACCATCACACCCCGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR TCA 90 bp | TCAGGCACGATAGGTGAGGAGGCATGGCTGGAAGCAGGGTGGAAGTaGGGTGGGTGTCTATGCCAGCTCAGGCAGTTTTCCTGGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SGTIGEEAWLEAGWK*GGCLCQLRQFSWKA Trigger: TGCCTTCCAGGAAAACTGCCTGAGCTGGCATAGACACCCACCTCACTTCCACCCTGCTTCCAGCCATGCCTCCTCACCTATCGTGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 90 bp | CTGATTTCATCATGTCTTGACTTCATTTCCGCCCTCCTTTCCTCCTaGCGCACTCTCCTCTCCTCCTGCTCTCTCATGGCCCGCTCATCG | + |
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Preference number: 1 (lower is better) Translates to: LISSCLDFISALLSS*RTLLSSCSLMARSS Trigger: CGATGAGCGGGCCATGAGAGAGCAGGAGGAGAGGAGAGTGCGGCAGGAGGAAAGGAGGGCGGAAATGAAGTCAAGACATGATGAAATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161789.8 |
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| 3UTR TCA 90 bp | AGCTCCCACAATGGGATGGCCAGTGGAGATGCTGTTCATCCTCCATaGTACATACAGGACCAACTCAACAGCTGCCTGATCTGTGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: SSHNGMASGDAVHPP*YIQDQLNSCLICGG Trigger: CCCTCCACAGATCAGGCAGCTGTTGAGTTGGTCCTGTATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 90 bp | ATCTTCCTACACACTCAGCTCCCACAATGGGATGGCCAGTGGAGATaGTGTTCATCCTCCATGATACATACAGGACCAACTCAACAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IFLHTQLPQWDGQWR*CSSSMIHTGPTQQL Trigger: CAGCTGTTGAGTTGGTCCTGTATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 90 bp | CCTCCTATCTTCCTACACACTCAGCTCCCACAATGGGATGGCCAGTaGAGATGCTGTTCATCCTCCATGATACATACAGGACCAACTCAA | + |
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Preference number: 1 (lower is better) Translates to: PPIFLHTQLPQWDGQ*RCCSSSMIHTGPTQ Trigger: TTGAGTTGGTCCTGTATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGATAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 90 bp | GGAACTCAATTTACAGAGAGAAGCAGGGGGCAAGATTTTCCTCACTaGGTAGTCCATACACGCCTTGTTCTCATTGCACCACAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: GTQFTERSRGQDFPH*VVHTRLVLIAPQTG Trigger: TCCTGTCTGTGGTGCAATGAGAACAAGGCGTGTATGGACTACCCAGTGAGGAAAATCTTGCCCCCTGCTTCTCTCTGTAAATTGAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161789.8 ENSMUST00000162598.2 |
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| 3UTR CCA 90 bp | AAGACTTCAGGTGACTTTATAAGCTTTTGTGCTATTGGATGGAGCTaGGTTAGGAAGGCAATCCTTACCAGACTTAGGGACAGTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: KTSGDFISFCAIGWS*VRKAILTRLRDSAF Trigger: GAAGGCACTGTCCCTAAGTCTGGTAAGGATTGCCTTCCTAACCCAGCTCCATCCAATAGCACAAAAGCTTATAAAGTCACCTGAAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 90 bp | AGAGGGAATATCTTTACTCCTTACCCTGCCATCAGGGTTGTGATCTaGTTACTAGGACACATCTGGATTTCAAAGAAATGTACAGCGTGG | + |
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Preference number: 1 (lower is better) Translates to: RGNIFTPYPAIRVVI*LLGHIWISKKCTAW Trigger: CCACGCTGTACATTTCTTTGAAATCCAGATGTGTCCTAGTAAGCAGATCACAACCCTGATGGCAGGGTAAGGAGTAAAGATATTCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 90 bp | TTATTAAAGACTTCAGGTGACTTTATAAGCTTTTGTGCTATTGGATaGAGCTGGGTTAGGAAGGCAATCCTTACCAGACTTAGGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: LLKTSGDFISFCAIG*SWVRKAILTRLRDS Trigger: ACTGTCCCTAAGTCTGGTAAGGATTGCCTTCCTAACCCAGCTCCATCCAATAGCACAAAAGCTTATAAAGTCACCTGAAGTCTTTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR GCA 90 bp | ACACTGGTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCAAGGGTGGCCATGGTGGTCTCTGCAGGCTCTaGTGGGGAGTGCATTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TLVPVEAGGITQVKGGHGGLCRL*WGVHSQ Trigger: CTGGGAATGCACTCCCCAGCAGAGCCTGCAGAGACC...ACCATGGCCACCCTTGACCTGGGTGATCCCTCCAGCCTCTACTGGCACCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCTTAAGGCCACACTGGTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCGGCTCTGCTGGGGAGTaGATTCCCAGGAAACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: CPLKATLVPVEAGGITQVGSAGE*IPRKLW Trigger: CCAGAGTTTCCTGGGAATGCACTCCCCAGCAGAGCC...GACCTGGGTGATCCCTCCAGCCTCTACTGGCACCAGTGTGGCCTTAAGAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCAGAATGGTGTGGGGTCCTCCTATCTTCCTACACACTCAGCTCCCACAATGGGTGGCCATGGTGGTaGGGTCTCTGCAGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KAEWCGVLLSSYTLSSHNGWPWW*GLCRLC Trigger: GCAGAGCCTGCAGAGACCTCACCACCATGGCCACCC...ATTGTGGGAGCTGAGTGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR TCA 90 bp | CCTACAGTAAGACCACCTCATCTGCTGGTGGCTGCTTTCCCAGAGGGAATATCTGACCCGAGTGTCTCCTaGCAACCTTCCCAGGGCCCG | + |
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Preference number: 2 (lower is better) Translates to: PTVRPPHLLVAAFPEGISDPSVS*QPSQGP Trigger: CGGGCCCTGGGAAGGTTGTCAGGAGACACTCGGGTC...AGATATTCCCTCTGGGAAAGCAGCCACCAGCAGATGAGGTGGTCTTACTGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR GCA 90 bp | GGCCACACTGGTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCAAGGGTGGCCAAGGAAACTCTGGAACTaGACGATCCACCACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GHTGASRGWRDHPGQGWPRKLWN*TIHHKC Trigger: ACACTTGTGGTGGATCGTGCAGTTCCAGAGTTTCCT...TGGCCACCCTTGACCTGGGTGATCCCTCCAGCCTCTACTGGCACCAGTGTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTCCTCCTATCTTCCTACACACTCAGCTCCCACAATGGGATGGCCAGTGGAGGGTGCCAGTAGAGGCTaGAGGGATCACCCAGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GSSYLPTHSAPTMGWPVEGASRG*RDHPGQ Trigger: TTGACCTGGGTGATCCCTCCAGCCTCTACTGGCACC...CTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGATAGGAGGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR TCA 90 bp | TACAGACACAGAGGGAACAAGAGTAGGATTGTCCTCTTAAGGCCACACTGGTGCGGGTGGCCATGGTGGTaGGGTCTCTGCAGGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YRHRGNKSRIVLLRPHWCGWPWW*GLCRLC Trigger: GCAGAGCCTGCAGAGACCTCACCACCATGGCCACCC...GCACCAGTGTGGCCTTAAGAGGACAATCCTACTCTTGTTCCCTCTGTGTCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR GCA 90 bp | TATCTTCCTACACACTCAGCTCCCACAATGGGATGGCCAGTGGAGATGCTGTTCGGTCTCTGCAGGCTCTaGTGGGGAGTGCATTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: YLPTHSAPTMGWPVEMLFGLCRL*WGVHSQ Trigger: CTGGGAATGCACTCCCCAGCAGAGCCTGCAGAGACC...GAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTCTTAAGGCCACACTGGTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCATTCCCAGGAAACTCTaGAACTGCACGATCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: CPLKATLVPVEAGGITQVIPRKL*NCTIHH Trigger: GTGGTGGATCGTGCAGTTCCAGAGTTTCCTGGGAAT...GACCTGGGTGATCCCTCCAGCCTCTACTGGCACCAGTGTGGCCTTAAGAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGGCAGAATGGTGTGGGGTCCTCCTATCTTCCTACACACTCAGCTCCCACAGCTGCCTGATCTGTaGAGGGAGATGTCCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: LEGRMVWGPPIFLHTQLPQLPDL*REMSKT Trigger: GGTCTTGGACATCTCCCTCCACAGATCAGGCAGCTG...TGGGAGCTGAGTGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTCTTAAGGCCACACTGGTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCAGGAAACTCTGGAACTaGACGATCCACCACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: CPLKATLVPVEAGGITQVRKLWN*TIHHKC Trigger: ACACTTGTGGTGGATCGTGCAGTTCCAGAGTTTCCT...GACCTGGGTGATCCCTCCAGCCTCTACTGGCACCAGTGTGGCCTTAAGAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR GCA 90 bp | TACAGACACAGAGGGAACAAGAGTAGGATTGTCCTCTTAAGGCCACACTGGTGCGGCTCTGCTGGGGAGTaGATTCCCAGGAAACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: YRHRGNKSRIVLLRPHWCGSAGE*IPRKLW Trigger: CCAGAGTTTCCTGGGAATGCACTCCCCAGCAGAGCC...GCACCAGTGTGGCCTTAAGAGGACAATCCTACTCTTGTTCCCTCTGTGTCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGTTTTCCTGGAAGGCAGAATGGTGTGGGGTCCTCCTATCTTCCTACACAATTCCCAGGAAACTCTaGAACTGCACGATCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RQFSWKAEWCGVLLSSYTIPRKL*NCTIHH Trigger: GTGGTGGATCGTGCAGTTCCAGAGTTTCCTGGGAAT...TGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTTCCAGGAAAACTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCAGAGGGAATATCTTTACTCCTTACCCTGCCATCAGGGTTGTGATCTGCACTCAGCTCCCACAATaGGATGGCCAGTGGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: FPRGNIFTPYPAIRVVICTQLPQ*DGQWRC Trigger: GCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGT...GCAGATCACAACCCTGATGGCAGGGTAAGGAGTAAAGATATTCCCTCTGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCTCGAAGTTCACCCAGCATACGCCCCAGCGAGCGGAACTCAATTTACAGCAAGATTTTCCTCACTaGGTAGTCCATACACGCCTT | + |
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Preference number: 2 (lower is better) Translates to: KASKFTQHTPQRAELNLQQDFPH*VVHTRL Trigger: AAGGCGTGTATGGACTACCCAGTGAGGAAAATCTTG...CTGTAAATTGAGTTCCGCTCGCTGGGGCGTATGCTGGGTGAACTTCGAGGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161789.8 ENSMUST00000162598.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCGAAGTTCACCCAGCATACGCCCCAGCGAGCGGAACTCAATTTACAGAGACAAGATTTTCCTCACTaGGTAGTCCATACACGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ASKFTQHTPQRAELNLQRQDFPH*VVHTRL Trigger: AAGGCGTGTATGGACTACCCAGTGAGGAAAATCTTG...TCTCTGTAAATTGAGTTCCGCTCGCTGGGGCGTATGCTGGGTGAACTTCGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161789.8 ENSMUST00000162598.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGTTAAAAACTAAGGCACGGGGTGTGATGGTGTCAGGCTTGGTTCTGTGGGATGGCCAGTGGAGATaGTGTTCATCCTCCATGATA | + |
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Preference number: 2 (lower is better) Translates to: QWLKTKARGVMVSGLVLWDGQWR*CSSSMI Trigger: TATCATGGAGGATGAACAGCATCTCCACTGGCCATC...CCACAGAACCAAGCCTGACACCATCACACCCCGTGCCTTAGTTTTTAACCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR CCA 90 bp | TACAGACACAGAGGGAACAAGAGTAGGATTGTCCTCTTAAGGCCACACTGGTGCATTCCCAGGAAACTCTaGAACTGCACGATCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: YRHRGNKSRIVLLRPHWCIPRKL*NCTIHH Trigger: GTGGTGGATCGTGCAGTTCCAGAGTTTCCTGGGAAT...GCACCAGTGTGGCCTTAAGAGGACAATCCTACTCTTGTTCCCTCTGTGTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGGCAGAATGGTGTGGGGTCCTCCTATCTTCCTACACACTCAGCTCCCAGTGGTGGTCAGTTCTTaGCTTAACAAAGTAAACATG | + |
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Preference number: 2 (lower is better) Translates to: LEGRMVWGPPIFLHTQLPVVVSS*LNKVNM Trigger: CATGTTTACTTTGTTAAGGCAAGAACTGACCACCAC...TGGGAGCTGAGTGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR CCA 90 bp | TGCTTACTAGGACACATCTGGATTTCAAAGAAATGTACAGCGTGGACGGAATCTATAGGTGAGGAGGCATaGCTGGAAGCAGGGTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: CLLGHIWISKKCTAWTESIGEEA*LEAGWK Trigger: CTTCCACCCTGCTTCCAGCCATGCCTCCTCACCTAT...AGATTCCGTCCACGCTGTACATTTCTTTGAAATCCAGATGTGTCCTAGTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR TCA 90 bp | CATATTAATACGAAGTTCATCAGGGCCTGTAAGGAGGGTTCCCTTTCAATAGACGGACAGACTGACAGGTaGAAAGGTTACCGAGATGCT | + |
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Preference number: 2 (lower is better) Translates to: HINTKFIRACKEGSLSIDGQTDR*KGYRDA Trigger: AGCATCTCGGTAACCTTTTCACCTGTCAGTCTGTCC...GTCTATTGAAAGGGAACCCTCCTTACAGGCCCTGATGAACTTCGTATTAATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGACATCAACGAGATTAAGGTCTCAGGTGATTACATACAGACACAGAGGAGGAAACTCTGGAACTaGACGATCCACCACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: KKDINEIKVSGDYIQTQRRKLWN*TIHHKC Trigger: ACACTTGTGGTGGATCGTGCAGTTCCAGAGTTTCCT...CCTCTGTGTCTGTATGTAATCACCTGAGACCTTAATCTCGTTGATGTCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 |
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| 3UTR-3UTR GCA 90 bp | AACAGGTACAATTTATACAGGCGACATATTAATACGAAGTTCATCAGGGCCTGTCTTTATAAGCTTTTGTaGTATTGGATGGAGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: NRYNLYRRHINTKFIRACLYKLL*YWMELG Trigger: ACCCAGCTCCATCCAATAGCACAAAAGCTTATAAAG...ACAGGCCCTGATGAACTTCGTATTAATATGTCGCCTGTATAAATTGTACCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR TCA 72 bp | CAGCGTGGACGGAATCTCAGGGACCCGAGTGTCTCCTaGCAACCTTCCCAGGGCCCGTGCGGATGTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QRGRNLRDPSVS*QPSQGPCGCVR Trigger: CCTGACACATCCGCACGGGCCCTGGGAAGGTTGTCAGGAGACACTCGGGTCCCTGAGATTCCGTCCACGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR TCA 72 bp | TGGAGGGATCACCCAGGTCAAGGGTGGCCATGGTGGTaGGGTCTCTGCAGGCTCTGCTGGGGAGTGCATTCC | + |
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Preference number: 3 (lower is better) Translates to: WRDHPGQGWPWW*GLCRLCWGVHS Trigger: GGAATGCACTCCCCAGCAGAGCCTGCAGAGACCTCACCACCATGGCCACCCTTGACCTGGGTGATCCCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR CCA 72 bp | GCAGGCTCTGCTGGGGAGTGCATTCCCAGGAAACTCTaGAACTGCACGATCCACCACAAGTGTGTGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: AGSAGECIPRKL*NCTIHHKCVPA Trigger: GGCTGGCACACACTTGTGGTGGATCGTGCAGTTCCAGAGTTTCCTGGGAATGCACTCCCCAGCAGAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| 3UTR GCA 72 bp | GGGTGTGATGGTGTCAGGCTTGGTTCTGTGGCTTCATaGTGCTCAAAGGTAGGCACAGACCACTCCCACGAG | + |
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Preference number: 3 (lower is better) Translates to: GCDGVRLGSVAS*CSKVGTDHSHE Trigger: CTCGTGGGAGTGGTCTGTGCCTACCTTTGAGCAGCATGAAGCCACAGAACCAAGCCTGACACCATCACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 72 bp | TGTGATGGTGTCAGGCTTGGTTCTGTGGCTTCATGCTaGTCAAAGGTAGGCACAGACCACTCCCACGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: CDGVRLGSVASC*SKVGTDHSHEH Trigger: GTGCTCGTGGGAGTGGTCTGTGCCTACCTTTGAGCAGCATGAAGCCACAGAACCAAGCCTGACACCATCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | CCAGCTCAGGCAGTTTTCCTGGAAGGCAGAATGGTGTaGGGTCCTCCTATCTTCCTACACACTCAGCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PAQAVFLEGRMV*GPPIFLHTQLP Trigger: TGGGAGCTGAGTGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTTCCAGGAAAACTGCCTGAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | GGTCCTCCTATCTTCCTACACACTCAGCTCCCACAATaGGATGGCCAGTGGAGATGCTGTTCATCCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: GPPIFLHTQLPQ*DGQWRCCSSSM Trigger: CATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGATAGGAGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 72 bp | CACACTCAGCTCCCACAATGGGATGGCCAGTGGAGATaGTGTTCATCCTCCATGATACATACAGGACCAACT | + |
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Preference number: 3 (lower is better) Translates to: HTQLPQWDGQWR*CSSSMIHTGPT Trigger: AGTTGGTCCTGTATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | GACCACTCCCACGAGCACCTGCTGCACTCCTTAGGCTaGAGAATTAAATACTCTAACATCAGCTCAGCAACC | + |
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Preference number: 3 (lower is better) Translates to: DHSHEHLLHSLG*RIKYSNISSAT Trigger: GGTTGCTGAGCTGATGTTAGAGTATTTAATTCTCCAGCCTAAGGAGTGCAGCAGGTGCTCGTGGGAGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | TTCCTACACACTCAGCTCCCACAATGGGATGGCCAGTaGAGATGCTGTTCATCCTCCATGATACATACAGGA | + |
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Preference number: 3 (lower is better) Translates to: FLHTQLPQWDGQ*RCCSSSMIHTG Trigger: TCCTGTATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | TCCTATCTTCCTACACACTCAGCTCCCACAATGGGATaGCCAGTGGAGATGCTGTTCATCCTCCATGATACA | + |
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Preference number: 3 (lower is better) Translates to: SYLPTHSAPTMG*PVEMLFILHDT Trigger: TGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTGAGTGTGTAGGAAGATAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR TCA 72 bp | CCTTGTTCTCATTGCACCACAGACAGGAGACATTCCTaGGGCACTCTTCACAGGATCTGTTTGTGTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: PCSHCTTDRRHS*GTLHRICLCTQ Trigger: CTGAGTACACAAACAGATCCTGTGAAGAGTGCCTCAGGAATGTCTCCTGTCTGTGGTGCAATGAGAACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162598.2 |
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| 3UTR CCA 72 bp | CACCAAAATTACAACAACAAGGGCCCATCACAGCAGTaGGCCTACAGACAAAACACAGCCTTCAGGAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: HQNYNNKGPSQQ*AYRQNTAFRKQ Trigger: TTGCTTCCTGAAGGCTGTGTTTTGTCTGTAGGCCCACTGCTGTGATGGGCCCTTGTTGTTGTAATTTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | TTTACAGAGAGAAGCAGGGGGCAAGATTTTCCTCACTaGGTAGTCCATACACGCCTTGTTCTCATTGCACCA | + |
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Preference number: 3 (lower is better) Translates to: FTERSRGQDFPH*VVHTRLVLIAP Trigger: TGGTGCAATGAGAACAAGGCGTGTATGGACTACCCAGTGAGGAAAATCTTGCCCCCTGCTTCTCTCTGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161789.8 ENSMUST00000162598.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGATGGAGCTGGGTTAGGAAGGCAATCCTTACCAGACTTAGGGACAGTGCCTAAACATGACTCTTGCTaGTTGCAATGTGAATCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LDGAGLGRQSLPDLGTVPKHDSC*LQCESS Trigger: GGAAGATTCACATTGCAACAAGCAAGAGTCATGTTT...AGGCACTGTCCCTAAGTCTGGTAAGGATTGCCTTCCTAACCCAGCTCCATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 72 bp | CACAGCCTTCAGGAAGCAAGGGTGGTGGTCAGTTCTTaGCTTAACAAAGTAAACATGACTCTTGCTTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: HSLQEARVVVSS*LNKVNMTLACC Trigger: GCAACAAGCAAGAGTCATGTTTACTTTGTTAAGGCAAGAACTGACCACCACCCTTGCTTCCTGAAGGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR GCA 72 bp | CTGCTTTCCCAGAGGGAATATCTTTACTCCTTACCCTaGCATCAGGGTTGTGATCTGCTTACTAGGACACAT | + |
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Preference number: 3 (lower is better) Translates to: LLSQREYLYSLP*HQGCDLLTRTH Trigger: ATGTGTCCTAGTAAGCAGATCACAACCCTGATGGCAGGGTAAGGAGTAAAGATATTCCCTCTGGGAAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | AATGAAAAATGTCATCCAAGAGGCCTGGACGTCTCATaGCAGGTTTTGGTAGGACTGCTTCCTGAGGGATTA | + |
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Preference number: 3 (lower is better) Translates to: NEKCHPRGLDVS*QVLVGLLPEGL Trigger: TAATCCCTCAGGAAGCAGTCCTACCAAAACCTGCCATGAGACGTCCAGGCCTCTTGGATGACATTTTTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CCA 72 bp | ACTTCAGGTGACTTTATAAGCTTTTGTGCTATTGGATaGAGCTGGGTTAGGAAGGCAATCCTTACCAGACTT | + |
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Preference number: 3 (lower is better) Translates to: TSGDFISFCAIG*SWVRKAILTRL Trigger: AAGTCTGGTAAGGATTGCCTTCCTAACCCAGCTCCATCCAATAGCACAAAAGCTTATAAAGTCACCTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR TCA 90 bp | GTGCCAGTAGAGGCTGGAGGGATCACCCAGGTCAAGGGTGGCCATGGTGGTGAGAGCAGCAGCACACAGTaGTGCCCAGGAGCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VPVEAGGITQVKGGHGGESSSTQ*CPGAQS Trigger: GCTCTGTGCTCCTGGGCATCACTGTGTGCTGCTGCT...CTCACCACCATGGCCACCCTTGACCTGGGTGATCCCTCCAGCCTCTACTGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| CDS-3UTR TCA 90 bp | GTGAGGTCTCTGCAGGCTCTGCTGGGGAGTGCATTCCCAGGAAACTCTGGAACTAGCAGCAGCACACAGTaGTGCCCAGGAGCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VRSLQALLGSAFPGNSGTSSSTQ*CPGAQS Trigger: GCTCTGTGCTCCTGGGCATCACTGTGTGCTGCTGCT...AGTTCCAGAGTTTCCTGGGAATGCACTCCCCAGCAGAGCCTGCAGAGACCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| CDS-3UTR TCA 90 bp | TTGGATGGAGCTGGGTTAGGAAGGCAATCCTTACCAGACTTAGGGACAGTGCCTAGCAGCAGCACACAGTaGTGCCCAGGAGCACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LDGAGLGRQSLPDLGTVPSSSTQ*CPGAQS Trigger: GCTCTGTGCTCCTGGGCATCACTGTGTGCTGCTGCT...AGGCACTGTCCCTAAGTCTGGTAAGGATTGCCTTCCTAACCCAGCTCCATCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR GCA 90 bp | TCAGCACCTCAGGCTGCCAGCTTCGTAATCGGCTTGCAGAGTGTGGGGACCAAGACGCCTTGTTCTCATTaGACCACAGACAGGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: SAPQAASFVIGLQSVGTKTPCSH*TTDRRH Trigger: ATGTCTCCTGTCTGTGGTGCAATGAGAACAAGGCGT...CTTGGTCCCCACACTCTGCAAGCCGATTACGAAGCTGGCAGCCTGAGGTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR TCA 90 bp | CAAGGGCCCATCACAGCAGTGGGCCTACAGACAAAACACAGCCTTCAGGAAGCAGATTTCATCATGTCTTaGCTTCATTTCCGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QGPITAVGLQTKHSLQEADFIMS*LHFRPP Trigger: AGGAGGGCGGAAATGAAGTCAAGACATGATGAAATC...TGCTTCCTGAAGGCTGTGTTTTGTCTGTAGGCCCACTGCTGTGATGGGCCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR CCA 90 bp | CAGCTCCCACAATGGGATGGCCAGTGGAGATGCTGTTCATCCTCCATGATACATCAAGATTTTCCTCACTaGGTAGTCCATACACGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLPQWDGQWRCCSSSMIHQDFPH*VVHTRL Trigger: AAGGCGTGTATGGACTACCCAGTGAGGAAAATCTTG...ATGTATCATGGAGGATGAACAGCATCTCCACTGGCCATCCCATTGTGGGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| 3UTR CAA 72 bp | TGTCATCCAAGAGGCCTGGACGTCTCATGGCAGGTTTaGGTAGGACTGCTTCCTGAGGGATTATTAAAGACT | + |
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Preference number: 4 (lower is better) Translates to: CHPRGLDVSWQV*VGLLPEGLLKT Trigger: AGTCTTTAATAATCCCTCAGGAAGCAGTCCTACCAAAACCTGCCATGAGACGTCCAGGCCTCTTGGATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR TCA 90 bp | CCCAAAAAGGACATCAACGAGATTAAGGTCTCAGGTGATTACATACAGACACAGGATTTCATCATGTCTTaGCTTCATTTCCGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PKKDINEIKVSGDYIQTQDFIMS*LHFRPP Trigger: AGGAGGGCGGAAATGAAGTCAAGACATGATGAAATC...CTGTGTCTGTATGTAATCACCTGAGACCTTAATCTCGTTGATGTCCTTTTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 |
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| CDS GCA 90 bp | CAGGATCTGTTTGTGTACTCAGAGCAACCCACTCTCGGAGGTTCCTaGGCGGAGGCTCCGGACAGAAGCAACAGCAGCACGGCACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: QDLFVYSEQPTLGGS*AEAPDRSNSSTAPR Trigger: CCTCGGTGCCGTGCTGCTGTTGCTTCTGTCCGGAGCCTCCGCGCAGGAACCTCCGAGAGTGGGTTGCTCTGAGTACACAAACAGATCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS GCA 90 bp | AACCGTATCTCTATCCATAATGACCCAACCACTCTCGGAGGTTCCTaGGCGGAGGCTCCGGACAGAAGCAACAGCAGCACGGCACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: NRISIHNDPTTLGGS*AEAPDRSNSSTAPR Trigger: CCTCGGTGCCGTGCTGCTGTTGCTTCTGTCCGGAGCCTCCGCGCAGGAACCTCCGAGAGTGGTTGGGTCATTATGGATAGAGATACGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161789.8 |
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| CDS-3UTR CAA 90 bp | AGGGTGGCCATGGTGGTGAGGTCTCTGCAGGCTCTGCTGGGGAGTGCATTCCCACTTCTCATACGGGTTTaGTTCTTTAAACAGACCGTA | + |
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Preference number: 5 (lower is better) Translates to: RVAMVVRSLQALLGSAFPLLIRV*FFKQTV Trigger: TACGGTCTGTTTAAAGAACAAAACCCGTATGAGAAG...TGGGAATGCACTCCCCAGCAGAGCCTGCAGAGACCTCACCACCATGGCCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009435.12 ENSMUST00000162429.8 ENSMUST00000162943.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGTTTTCCTGGAAGGCAGAATGGTGTGGGGTCCTCCTATCTTCCTACACACTTCTCATACGGGTTTaGTTCTTTAAACAGACCGTA | + |
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Preference number: 5 (lower is better) Translates to: RQFSWKAEWCGVLLSSYTLLIRV*FFKQTV Trigger: TACGGTCTGTTTAAAGAACAAAACCCGTATGAGAAG...TGTGTAGGAAGATAGGAGGACCCCACACCATTCTGCCTTCCAGGAAAACTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS-3UTR CAA 90 bp | CAGAAAAATGGTAAGACTCCAGATTGTGGTAAAGGTTATTCCCTTACTTTGTGGCACGCCTTGTTCTCATaGCACCACAGACAGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: QKNGKTPDCGKGYSLTLWHALFS*HHRQET Trigger: TGTCTCCTGTCTGTGGTGCAATGAGAACAAGGCGTG...CCACAAAGTAAGGGAATAACCTTTACCACAATCTGGAGTCTTACCATTTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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| CDS GCA 72 bp | ATCAAGGCCTCGAAGTTCACCACTCTCGGAGGTTCCTaGGCGGAGGCTCCGGACAGAAGCAACAGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: IKASKFTTLGGS*AEAPDRSNSST Trigger: CGTGCTGCTGTTGCTTCTGTCCGGAGCCTCCGCGCAGGAACCTCCGAGAGTGGTGAACTTCGAGGCCTTGAT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162429.8 |
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| CDS GCA 72 bp | TTTGTGTACTCAGAGCAACCCACTCTCGGAGGTTCCTaGGCGGAGGCTCCGGACAGAAGCAACAGCAGCACG | + |
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Preference number: 6 (lower is better) Translates to: FVYSEQPTLGGS*AEAPDRSNSST Trigger: CGTGCTGCTGTTGCTTCTGTCCGGAGCCTCCGCGCAGGAACCTCCGAGAGTGGGTTGCTCTGAGTACACAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009435.12 |
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