Pregenerated sensors for PTTG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020415Ensembl transcript IDs: ENSMUST00000117446.8, ENSMUST00000140434.8, ENSMUST00000152115.8
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTTTCAGTGGTTGACAAGTTACTGTCAGTCTACACTGGTCCTCTaGCAGCCACAGGTGGAACCTGGAGTGCTCATCCAGTCTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: SFQWLTSYCQSTLVL*QPQVEPGVLIQSQL Trigger: TAACTGAGACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGACTGACAGTAACTTGTCAACCACTGAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTAATTCAAGGGGAGAAGTaGGATCTGGTGCTCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLIQGEK*DLVLLR Trigger: CCTGAGGAGCACCAGATCTCACTTCTCCCCTTGAAT...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| 3UTR-3UTR TCA 90 bp | CTACACTGGTCCTCTGACAGCCACAGGTGGAACCTGGAGTGCTCATCCAGTCTCCTCAACCATACACAATaGCTGAGGGAAGTTCTTATT | + |
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Preference number: 2 (lower is better) Translates to: LHWSSDSHRWNLECSSSLLNHTQ*LREVLI Trigger: AATAAGAACTTCCCTCAGTCATTGTGTATGGTTGAG...GAGACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR TCA 90 bp | GATCTGGAAGAAGAGGAGTTTCTCGTTAGATTCTGCACTTCCTTTCTAGCCATCTCTACACTGGTCCTCTaGCAGCCACAGGTGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: DLEEEEFLVRFCTSFLAISTLVL*QPQVEP Trigger: AGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGA...GATGGCTAGAAAGGAAGTGCAGAATCTAACGAGAAACTCCTCTTCTTCCAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATAAAGTCTCACAAAATCATAAAATCAGACCGGCAACCCATCTCATTTGAGTCTGACAGCCACAGGTaGAACCTGGAGTGCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: SIKSHKIIKSDRQPISFESDSHR*NLECSS Trigger: GGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGA...CTCAAATGAGATGGGTTGCCGGTCTGATTTTATGATTTTGTGAGACTTTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATAAAGTCTCACAAAATCATAAAATCAGACCGGCAACCCATCTCATTTGAGAGGTGGAACCTGGAGTaGTCATCCAGTCTCAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: SIKSHKIIKSDRQPISFERWNLE*SSSLSY Trigger: GTAACTGAGACTGGATGAGCACTCCAGGTTCCACCT...CTCAAATGAGATGGGTTGCCGGTCTGATTTTATGATTTTGTGAGACTTTATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCAGTGGTTGACAAGTTACTGTCAGTCTACACTGGTCCTCTGACAGCCACACAGAAAACCTTCTTTTaGGACTCAACCATACACAAT | + |
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Preference number: 2 (lower is better) Translates to: LSVVDKLLSVYTGPLTATQKTFF*DSTIHN Trigger: ATTGTGTATGGTTGAGTCCCAAAAGAAGGTTTTCTG...TGTGGCTGTCAGAGGACCAGTGTAGACTGACAGTAACTTGTCAACCACTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR CCA 90 bp | GATCTGGAAGAAGAGGAGTTTCTCGTTAGATTCTGCACTTCCTTTCTAGCCATCGCCTTAAGCTTTCAGTaGTTGACAAGTTACTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: DLEEEEFLVRFCTSFLAIALSFQ*LTSYCQ Trigger: CTGACAGTAACTTGTCAACCACTGAAAGCTTAAGGC...GATGGCTAGAAAGGAAGTGCAGAATCTAACGAGAAACTCCTCTTCTTCCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | CAGGCGGCAATTCAACATCCAGAGTGGAGAGGGCACTaGGAGGAGAGTACAGCGGATCTGGAAGAAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: QAAIQHPEWRGH*EESTADLEEEE Trigger: CTCCTCTTCTTCCAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACTCTGGATGTTGAATTGCCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR GCA 72 bp | CACTGGTCCTCTGACAGCCACAGGTGGAACCTGGAGTaGTCATCCAGTCTCAGTTACCACAGACTTCAACTC | + |
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Preference number: 3 (lower is better) Translates to: HWSSDSHRWNLE*SSSLSYHRLQL Trigger: GAGTTGAAGTCTGTGGTAACTGAGACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | ACTGTCAGTCTACACTGGTCCTCTGACAGCCACAGGTaGAACCTGGAGTGCTCATCCAGTCTCAGTTACCAC | + |
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Preference number: 3 (lower is better) Translates to: TVSLHWSSDSHR*NLECSSSLSYH Trigger: GTGGTAACTGAGACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGACTGACAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | CAGGCGGCAATTCAACATCCAGAGTGGAGAGGGCACTaGGAGGAGAGTACAGCGGATCTGTACAATTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: QAAIQHPEWRGH*EESTADLYNSV Trigger: GACTGAATTGTACAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACTCTGGATGTTGAATTGCCGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140434.8 |
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| 3UTR TCA 72 bp | TGGTTGACAAGTTACTGTCAGTCTACACTGGTCCTCTaGCAGCCACAGGTGGAACCTGGAGTGCTCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: WLTSYCQSTLVL*QPQVEPGVLIQ Trigger: CTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGACTGACAGTAACTTGTCAACCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | AGTGGAGAGGGCACTGGGAGGAGAGTACAGCGGATCTaGAAGAAGAGGAGTTTCTCGTTAGATTCTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: SGEGTGRRVQRI*KKRSFSLDSAL Trigger: AAGTGCAGAATCTAACGAGAAACTCCTCTTCTTCCAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | CTGTGTTCAACTTCACCCACTGCTATCACCAAAGGCTaGCCAAGGTTCCAGAAAACCTTCTTTTGGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: LCSTSPTAITKG*PRFQKTFFWDS Trigger: TGAGTCCCAAAAGAAGGTTTTCTGGAACCTTGGCCAGCCTTTGGTGATAGCAGTGGGTGAAGTTGAACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR-3UTR CAA 90 bp | GGCCAAGGTTCCAGAAAACCTTCTTTTGGGACTCAACCATACACAATGACTGAGGTTCTTATTCTAAACTaGGCCCCAATATCCCGAAGC | + |
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Preference number: 3 (lower is better) Translates to: GQGSRKPSFGTQPYTMTEVLILN*APISRS Trigger: GCTTCGGGATATTGGGGCCAAGTTTAGAATAAGAAC...CTCAGTCATTGTGTATGGTTGAGTCCCAAAAGAAGGTTTTCTGGAACCTTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR TCA 72 bp | CAAAATCATAAAATCAGACCGGCAACCCATCTCATTTaGGGCACTTTCTCTCTCTCTCTCTCTCTCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QNHKIRPATHLI*GTFSLSLSLSP Trigger: GGGAGAGAGAGAGAGAGAGAGAGAGAAAGTGCCTCAAATGAGATGGGTTGCCGGTCTGATTTTATGATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| 3UTR CCA 72 bp | CACACACCCGTTCTAACTAAAGCCTTAAGCTTTCAGTaGTTGACAAGTTACTGTCAGTCTACACTGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: HTPVLTKALSFQ*LTSYCQSTLVL Trigger: GAGGACCAGTGTAGACTGACAGTAACTTGTCAACCACTGAAAGCTTAAGGCTTTAGTTAGAACGGGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR TCA 90 bp | GTCTACACTGGTCCTCTGACAGCCACAGGTGGAACCTGGAGTGCTCATCCAGTCTCCCATCTAAGGCCTTaGCACCAGTGCCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VYTGPLTATGGTWSAHPVSHLRP*HQCPAS Trigger: TGAAGCTGGGCACTGGTGTCAAGGCCTTAGATGGGA...GACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR CCA 90 bp | GTCTACACTGGTCCTCTGACAGCCACAGGTGGAACCTGGAGTGCTCATCCAGTCGGGAGAAGTGAGATCTaGTGCTCCTCAGGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VYTGPLTATGGTWSAHPVGRSEI*CSSGRS Trigger: TGACCTGCCTGAGGAGCACCAGATCTCACTTCTCCC...GACTGGATGAGCACTCCAGGTTCCACCTGTGGCTGTCAGAGGACCAGTGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR CCA 90 bp | GAGTGGAGAGGGCACTGGGAGGAGAGTACAGCGGATCTGTACAATTCAGTCCCGGGGAGAAGTGAGATCTaGTGCTCCTCAGGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EWRGHWEESTADLYNSVPGRSEI*CSSGRS Trigger: TGACCTGCCTGAGGAGCACCAGATCTCACTTCTCCC...CGGGACTGAATTGTACAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140434.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAGAGGGCACTGGGAGGAGAGTACAGCGGATCTGTACAATTCAGTCCCGAATTCAAGGGGAGAAGTaGGATCTGGTGCTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SGEGTGRRVQRICTIQSRIQGEK*DLVLLR Trigger: CCTGAGGAGCACCAGATCTCACTTCTCCCCTTGAAT...TCGGGACTGAATTGTACAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140434.8 |
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| CDS-3UTR TCA 90 bp | TGGCCCCAATATCCCGAAGCTGCCCAGAGACTCACCTGTACAATTCAGTCCCGATTTCGGCAACTCTGTTaGCTGTCCCCAAAGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: WPQYPEAAQRLTCTIQSRFRQLC*LSPKPF Trigger: GAAAGGCTTTGGGGACAGTCAACAGAGTTGCCGAAA...TCGGGACTGAATTGTACAGGTGAGTCTCTGGGCAGCTTCGGGATATTGGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTATCCCATCTAAGGCCTTaGCACCAGTGCCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLSHLRP*HQCPAS Trigger: TGAAGCTGGGCACTGGTGTCAAGGCCTTAGATGGGA...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR TCA 90 bp | TCTAAACTTGGCCCCAATATCCCGAAGCTGCCCAGAGACTCACCTGTACAATTCGCCGACTCGAGGCGTTaGAACCTGCAATTTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: SKLGPNIPKLPRDSPVQFADSRR*NLQFPI Trigger: GATGGGAAATTGCAGGTTTCAACGCCTCGAGTCGGC...GAATTGTACAGGTGAGTCTCTGGGCAGCTTCGGGATATTGGGGCCAAGTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTAGCCGACTCGAGGCGTTaGAACCTGCAATTTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLADSRR*NLQFPI Trigger: GATGGGAAATTGCAGGTTTCAACGCCTCGAGTCGGC...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAGAGGGCACTGGGAGGAGAGTACAGCGGATCTGTACAATTCAGTCCCGAAGAAGTGAGATCTGGTaGTCCTCAGGCAGGTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SGEGTGRRVQRICTIQSRRSEIW*SSGRSK Trigger: TTTTGACCTGCCTGAGGAGCACCAGATCTCACTTCT...TCGGGACTGAATTGTACAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140434.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTAGTCGGCTGTTTTGGTTaGAGGGGTTTGCCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLVGCFG*RGLPVF Trigger: GAAGACTGGCAAACCCCTCCAACCAAAACAGCCGAC...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR TCA 90 bp | GGCTGGCCAAGGTTCCAGAAAACCTTCTTTTGGGACTCAACCATACACAATGACATTCAAGGGGAGAAGTaGGATCTGGTGCTCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GWPRFQKTFFWDSTIHNDIQGEK*DLVLLR Trigger: CCTGAGGAGCACCAGATCTCACTTCTCCCCTTGAAT...GTCATTGTGTATGGTTGAGTCCCAAAAGAAGGTTTTCTGGAACCTTGGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTACGAGGCGTTGAAACCTaGAATTTCCCATCTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLRGVET*NFPSKA Trigger: GGCCTTAGATGGGAAATTGCAGGTTTCAACGCCTCG...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGCCAAGGTTCCAGAAAACCTTCTTTTGGGACTCAACCATACACAATGACGTCGGCTGTTTTGGTTaGAGGGGTTTGCCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GWPRFQKTFFWDSTIHNDVGCFG*RGLPVF Trigger: GAAGACTGGCAAACCCCTCCAACCAAAACAGCCGAC...GTCATTGTGTATGGTTGAGTCCCAAAAGAAGGTTTTCTGGAACCTTGGCCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR TCA 90 bp | AGTGGAGAGGGCACTGGGAGGAGAGTACAGCGGATCTGTACAATTCAGTCCCGACAAAGTCTAGAGGATTaGAAGGGAAGAACTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SGEGTGRRVQRICTIQSRQSLED*KGRTFL Trigger: TAGAAAAGTTCTTCCCTTTCAATCCTCTAGACTTTG...TCGGGACTGAATTGTACAGATCCGCTGTACTCTCCTCCCAGTGCCCTCTCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140434.8 |
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| CDS-3UTR GCA 90 bp | ACTGCTATCACCAAAGGCTGGCCAAGGTTCCAGAAAACCTTCTTTTGGGACTCAAGAAGTGAGATCTGGTaGTCCTCAGGCAGGTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TAITKGWPRFQKTFFWDSRSEIW*SSGRSK Trigger: TTTTGACCTGCCTGAGGAGCACCAGATCTCACTTCT...TGAGTCCCAAAAGAAGGTTTTCTGGAACCTTGGCCAGCCTTTGGTGATAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR TCA 90 bp | CTAAACTTGGCCCCAATATCCCGAAGCTGCCCAGAGACTCACCTGTACAATTCACAAAGTCTAGAGGATTaGAAGGGAAGAACTTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LNLAPISRSCPETHLYNSQSLED*KGRTFL Trigger: TAGAAAAGTTCTTCCCTTTCAATCCTCTAGACTTTG...TGAATTGTACAGGTGAGTCTCTGGGCAGCTTCGGGATATTGGGGCCAAGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR GCA 90 bp | CTTGTTCTCTTGAGCATAAAGTCTCACAAAATCATAAAATCAGACCGGCAACCCCGAGGCGTTGAAACCTaGAATTTCCCATCTAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LVLLSIKSHKIIKSDRQPRGVET*NFPSKA Trigger: GGCCTTAGATGGGAAATTGCAGGTTTCAACGCCTCG...GGGTTGCCGGTCTGATTTTATGATTTTGTGAGACTTTATGCTCAAGAGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGGAACCTGGAGTGCTCATCCAGTCTCAGTTACCACAGACTTCAACTCCTGGTCGGCTGTTTTGGTaGGAGGGGTTTGCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: QVEPGVLIQSQLPQTSTPGRLFW*EGFASL Trigger: AAGACTGGCAAACCCCTCCAACCAAAACAGCCGACC...AGGAGTTGAAGTCTGTGGTAACTGAGACTGGATGAGCACTCCAGGTTCCACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTAGGTCGGCTGTTTTGGTaGGAGGGGTTTGCCAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLGRLFW*EGFASL Trigger: AAGACTGGCAAACCCCTCCAACCAAAACAGCCGACC...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTATCAAGGTCGGCTGTTTaGGTTGGAGGGGTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLSRSAV*VGGVCQ Trigger: CTGGCAAACCCCTCCAACCAAAACAGCCGACCTTGA...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR CAA 90 bp | CCCGAAGCTGCCCAGAGACTCACCTGTACAATTCAGTCCCGACAACAAAAACGTTCAAAGTCTAGAGGATaGAAAGGGAAGAACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PEAAQRLTCTIQSRQQKRSKSRG*KGKNFS Trigger: AGAAAAGTTCTTCCCTTTCAATCCTCTAGACTTTGA...ACGTTTTTGTTGTCGGGACTGAATTGTACAGGTGAGTCTCTGGGCAGCTTCGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGTACAGCGGATCAGATTCCCATGATAGAAAGGGTGTCTTCAGAGGGCTACAAAACTCTAGAGGATaGAAAGGGAAGAACTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: GEYSGSDSHDRKGVFRGLQNSRG*KGKNFS Trigger: AGAAAAGTTCTTCCCTTTCAATCCTCTAGAGTTTTG...TAGCCCTCTGAAGACACCCTTTCTATCATGGGAATCTGATCCGCTGTACTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152115.8 |
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| CDS-3UTR CAA 90 bp | ACGCGAAAGCTACTTGTTCTCTTGAGCATAAAGTCTCACAAAATCATAAAATCATCAAGGTCGGCTGTTTaGGTTGGAGGGGTTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TRKLLVLLSIKSHKIIKSSRSAV*VGGVCQ Trigger: CTGGCAAACCCCTCCAACCAAAACAGCCGACCTTGA...TGATTTTATGATTTTGTGAGACTTTATGCTCAAGAGAACAAGTAGCTTTCGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000117446.8 |
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