Pregenerated sensors for PTRHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096199Ensembl transcript IDs: ENSMUST00000179139.3
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCCCGTGTCAGATCTACAACTCGCTTCCTCTCTCCCAGTCCCTTaGATGGTAGAAGTCCCACCCTTATTCTCTCTTCTGCCCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: FPVSDLQLASSLPVP*MVEVPPLFSLLPSH Trigger: GTGGCTGGGCAGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGGACTGGGAGAGAGGAAGCGAGTTGTAGATCTGACACGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 90 bp | AACTGTCAGTGGCTGGTGATGGAGTCACAGCAAGGGAAGAGACACTaGCCGCACCCTCCTCTATCTTGTCAAGATGCTGATACTTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: NCQWLVMESQQGKRH*PHPPLSCQDADTCA Trigger: AGCGCAAGTATCAGCATCTTGACAAGATAGAGGAGGGTGCGGCCAGTGTCTCTTCCCTTGCTGTGACTCCATCACCAGCCACTGACAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 90 bp | GGGAAGAGTATAACAACATTGAAAGGAACCCACAATGCTTCAGGATaGTGGCCATTTGGCTCCCCAGACCCAGCTGACTTTCAGTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GKSITTLKGTHNASG*WPFGSPDPADFQFS Trigger: GGAGAACTGAAAGTCAGCTGGGTCTGGGGAGCCAAATGGCCACCATCCTGAAGCATTGTGGGTTCCTTTCAATGTTGTTATACTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 90 bp | CAGGAAAGAGGAAGAAAAGAAGCATTCTATTATGGCACCAGAGACTaGAGGCCAGTCATGGGACATCAAGGAAAGAAGAGGGAAATGGGG | + |
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Preference number: 1 (lower is better) Translates to: QERGRKEAFYYGTRD*RPVMGHQGKKREMG Trigger: CCCCATTTCCCTCTTCTTTCCTTGATGTCCCATGACTGGCCTCCAGTCTCTGGTGCCATAATAGAATGCTTCTTTTCTTCCTCTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 90 bp | TCTGAGGTTAGCTCATTATGTAAACAGACTACTTACTATCTAAAGTaGTCGAGCAATCGTACGTTGAGTGTTCACAACAGGCTTGTGAAC | + |
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Preference number: 1 (lower is better) Translates to: SEVSSLCKQTTYYLK*SSNRTLSVHNRLVN Trigger: GTTCACAAGCCTGTTGTGAACACTCAACGTACGATTGCTCGATCACTTTAGATAGTAAGTAGTCTGTTTACATAATGAGCTAACCTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCTGGGCAGGGACATCTTaGCTAGAGGCCTGCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEAWAGTS*LEACWE Trigger: CTCCCAGCAGGCCTCTAGGCAAGATGTCCCTGCCCA...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGGGGACGTGTGAGGGGTaGTGCTCAGGGTGGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWGTCEG*CSGWTG Trigger: CCCAGTCCACCCTGAGCAGCACCCCTCACACGTCCC...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCTGTGTGGCCTGGGCATaGATCACCTCCACAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEACVAWA*ITSTGE Trigger: CTCTCCTGTGGAGGTGATGCATGCCCAGGCCACACA...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGGGCATCATCATAGCTaGATGCCCAACGGCACATCC | + |
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Preference number: 2 (lower is better) Translates to: PQLATSLLCQSPGKLQTLGHHHS*MPNGTS Trigger: GGATGTGCCGTTGGGCATTCAGCTATGATGATGCCC...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGTCTTGCCTAGAGGCCTaGTGGGAGCAAGAGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PQLATSLLCQSPGKLQTLSCLEA*WEQEHS Trigger: ACTGTGCTCTTGCTCCCAGCAGGCCTCTAGGCAAGA...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCTGCCTAGAGGCCTGCTaGGAGCAAGAGCACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEACLEAC*EQEHSE Trigger: TTCACTGTGCTCTTGCTCCCAGCAGGCCTCTAGGCA...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CAA 90 bp | TTTCCCCGTGTCAGATCTACAACTCGCTTCCTCTCTCCCAGTCCCTaGGATGGTAGAAGTCCCACCCTTATTCTCTCTTCTGCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FPRVRSTTRFLSPSP*DGRSPTLILSSAQP Trigger: TGGCTGGGCAGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGGACTGGGAGAGAGGAAGCGAGTTGTAGATCTGACACGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCTGCCCAGCCACTGGATaGTCAGCATTCATTGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEACPATG*SAFIER Trigger: TCTCTCAATGAATGCTGACCATCCAGTGGCTGGGCA...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGTGTCTGAACTGTCAGTaGCTGGTGATGGAGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PQLATSLLCQSPGKLQTLCLNCQ*LVMESQ Trigger: CTGTGACTCCATCACCAGCCACTGACAGTTCAGACA...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTATGTGGAGGAGCCAGATaGGAACCAGCCTCTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: ITPMSEPREVADPGQSILCGGAR*EPASGL Trigger: AAGTCCAGAGGCTGGTTCCCATCTGGCTCCTCCACA...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGTCTCTCCCAGTCCCTTaGATGGTAGAAGTCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWSLPVP*MVEVPP Trigger: GGGTGGGACTTCTACCATCCAAGGGACTGGGAGAGA...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCGACATCCATCTTTGGTaGCTTGAAGGTTGCTGGATC | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEADIHLW*LEGCWI Trigger: GATCCAGCAACCTTCAAGCCACCAAAGATGGATGTC...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTACCTTATTCTCTCTTCTaGCCAGCCACTGGATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ITPMSEPREVADPGQSILPYSLF*PATGWS Trigger: TGACCATCCAGTGGCTGGGCAGAAGAGAGAATAAGG...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGCCTGTTGTTCAAAATaGTGGATGCTCTCCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ITPMSEPREVADPGQSILACCSK*WMLSWV Trigger: GACCCAGGAGAGCATCCAGCATTTTGAACAACAGGC...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAGGCTCCATTTGTCTaGCGAGTTCCTATCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: ITPMSEPREVADPGQSILEAPFV*RVPIIS Trigger: GGAAATGATAGGAACTCGGCAGACAAATGGAGCCTC...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGGCCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCACATTTTAAACCTGAGTaGCCTGAAGTCCATTATTCC | + |
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Preference number: 2 (lower is better) Translates to: AQASVSHITPMSEPREVAHFKPE*PEVHYS Trigger: GGAATAATGGACTTCAGGTCACTCAGGTTTAAAATG...TGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGGCCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGGCCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAACTTCTGGTTTTTGCTaGACTCTCAAGAACTCACTT | + |
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Preference number: 2 (lower is better) Translates to: AQASVSHITPMSEPREVATSGFC*TLKNSL Trigger: AAGTGAGTTCTTGAGAGTTCAGCAAAAACCAGAAGT...TGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGGCCTGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCATTATGGGTTCGAAGTaGTTGCTTCTTTCCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: PMSEPREVADPGQSILEAIMGSK*LLLSFY Trigger: GTAGAAGGAAAGAAGCAACCACTTCGAACCCATAAT...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | TACAAACTTGTCATGTACAGATGTTTAGGGAGGGGAGTAATTCTTGGCTGGAAGCTCCCCAGACCCAGCTaGCTTTCAGTTCTCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YKLVMYRCLGRGVILGWKLPRPS*LSVLPE Trigger: TTCTGGGAGAACTGAAAGTCAGCTGGGTCTGGGGAG...CTTCCAGCCAAGAATTACTCCCCTCCCTAAACATCTGTACATGACAAGTTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGTGGGTTCGAAGTGGTTaGTTCTTTCCTTCTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWWVRSG*FFPSTN Trigger: ATTGGTAGAAGGAAAGAAGCAACCACTTCGAACCCA...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGTTTCCAAACTTCACCTaGGGCAGTCAAATGATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWFPNFT*GSQMIC Trigger: ACAGATCATTTGACTGCCCCAGGTGAAGTTTGGAAA...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | AATACAGTGGCGCCAAGTTCATGTGAACCTGAAGACTATATAATCCAGTCATACCTAGTGTTTGTCCTGTaGCACAGCAGATACGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NTVAPSSCEPEDYIIQSYLVFVL*HSRYGP Trigger: TGGGCCGTATCTGCTGTGTCACAGGACAAACACTAG...GTATGACTGGATTATATAGTCTTCAGGTTCACATGAACTTGGCGCCACTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTACAGATGTTTAGGGAGGGGAGTAATTCTTGGCTGGAAGACTTTGTGAAGAGAAGCATTCTATTATaGCACCAGAGACTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: HVQMFREGSNSWLEDFVKRSILL*HQRLEA Trigger: GGCCTCCAGTCTCTGGTGCCATAATAGAATGCTTCT...CTTCACAAAGTCTTCCAGCCAAGAATTACTCCCCTCCCTAAACATCTGTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CCA 90 bp | AATACAGTGGCGCCAAGTTCATGTGAACCTGAAGACTATATAATCCAGTCATACCCCAAGAGAACAAAGTaGTGTGCTGGATCAACCAAG | + |
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Preference number: 2 (lower is better) Translates to: NTVAPSSCEPEDYIIQSYPKRTK*CAGSTK Trigger: CTTGGTTGATCCAGCACACCACTTTGTTCTCTTGGG...GTATGACTGGATTATATAGTCTTCAGGTTCACATGAACTTGGCGCCACTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR TCA 90 bp | AATACAGTGGCGCCAAGTTCATGTGAACCTGAAGACTATATAATCCAGTCATACATCTTGTCAAGATGCTaGTACTTGCGCTCTGGAATC | + |
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Preference number: 2 (lower is better) Translates to: NTVAPSSCEPEDYIIQSYILSRC*YLRSGI Trigger: GATTCCAGAGCGCAAGTATCAGCATCTTGACAAGAT...GTATGACTGGATTATATAGTCTTCAGGTTCACATGAACTTGGCGCCACTGTATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CAA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGATCCAGAGGCTCTGCTaGCCCGCCGCCTGCGGCCCG | + |
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Preference number: 3 (lower is better) Translates to: PQLATSLLCQSPGKLQTLIQRLC*PAACGP Trigger: CGGGCCGCAGGCGGCGGGCAAGCAGAGCCTCTGGAT...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | AGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTaGACGGCAGAGGCAGGCACATCTTCTCTGGGCATC | + |
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Preference number: 3 (lower is better) Translates to: SWCGCAHLQSQH*TAEAGTSSLGI Trigger: GATGCCCAGAGAAGATGTGCCTGCCTCTGCCGTCCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | CAAGAGGCTGCTGGGCTGGACAGAGGTGAGCCATCATaGGAGCGTGACAAACGCTCCCTGACCGGTAATGAA | + |
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Preference number: 3 (lower is better) Translates to: QEAAGLDRGEPS*ERDKRSLTGNE Trigger: TTCATTACCGGTCAGGGAGCGTTTGTCACGCTCTCATGATGGCTCACCTCTGTCCAGCCCAGCAGCCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | GTGTGCTGGATCAACCAAGAGAAAGAACTGTGGTGGTaGCCCCCTTTAACCCCAGCACTCGGGAGGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VCWINQEKELWW*PPLTPALGRQA Trigger: TGCCTGCCTCCCGAGTGCTGGGGTTAAAGGGGGTCACCACCACAGTTCTTTCTCTTGGTTGATCCAGCACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CAA 90 bp | CCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGAAGCCCCACAGGAGAGGGTCTaGGGGCACCTTTGTAAACCT | + |
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Preference number: 3 (lower is better) Translates to: PMSEPREVADPGQSILEAPQERV*GHLCKP Trigger: AGGTTTACAAAGGTGCCCCAAGACCCTCTCCTGTGG...GGCTTCTAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | TGGCTGGTGATGGAGTCACAGCAAGGGAAGAGACACTaGCCGCACCCTCCTCTATCTTGTCAAGATGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: WLVMESQQGKRH*PHPPLSCQDAD Trigger: ATCAGCATCTTGACAAGATAGAGGAGGGTGCGGCCAGTGTCTCTTCCCTTGCTGTGACTCCATCACCAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | ATCTTGCCTAGAGGCCTGCTGGGAGCAAGAGCACAGTaGAATGAATCCGGACTATGCGGACAGACAGATGTT | + |
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Preference number: 3 (lower is better) Translates to: ILPRGLLGARAQ*NESGLCGQTDV Trigger: AACATCTGTCTGTCCGCATAGTCCGGATTCATTTCACTGTGCTCTTGCTCCCAGCAGGCCTCTAGGCAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | ACAACATTGAAAGGAACCCACAATGCTTCAGGATGGTaGCCATTTGGCTCCCCAGACCCAGCTGACTTTCAG | + |
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Preference number: 3 (lower is better) Translates to: TTLKGTHNASGW*PFGSPDPADFQ Trigger: CTGAAAGTCAGCTGGGTCTGGGGAGCCAAATGGCCACCATCCTGAAGCATTGTGGGTTCCTTTCAATGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | CTGCCGAGTTCCTATCATTTCCACTCCCAGGATCCATaGTATTCAGATCAAGTAAGGCTGTGGAGGAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LPSSYHFHSQDP*YSDQVRLWRSQ Trigger: CTGGCTCCTCCACAGCCTTACTTGATCTGAATACCATGGATCCTGGGAGTGGAAATGATAGGAACTCGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | ACTTCCTTGCCTCCTTCCCTCGGTAAGACGTGTTACTaGACAGATGAGGCTAACTTGGTGGAAAACGGTCTC | + |
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Preference number: 3 (lower is better) Translates to: TSLPPSLGKTCY*TDEANLVENGL Trigger: GAGACCGTTTTCCACCAAGTTAGCCTCATCTGTTCAGTAACACGTCTTACCGAGGGAAGGAGGCAAGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | TCGTACGTTGAGTGTTCACAACAGGCTTGTGAACAATaGGGAGACACAGAAGGGCACTTCCTTGCCTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SYVECSQQACEQ*GDTEGHFLASF Trigger: GAAGGAGGCAAGGAAGTGCCCTTCTGTGTCTCCTCATTGTTCACAAGCCTGTTGTGAACACTCAACGTACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CAA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGCAGAGAAACCAAGATTaGTTTCCAAACTTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWQRNQD*FPNFTW Trigger: CCAGGTGAAGTTTGGAAACAAATCTTGGTTTCTCTG...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | GGAAGAAAAGAAGCATTCTATTATGGCACCAGAGACTaGAGGCCAGTCATGGGACATCAAGGAAAGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GRKEAFYYGTRD*RPVMGHQGKKR Trigger: CCTCTTCTTTCCTTGATGTCCCATGACTGGCCTCCAGTCTCTGGTGCCATAATAGAATGCTTCTTTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | ACACAGAGAAACCAAGATTTGTTTCCAAACTTCACCTaGGGCAGTCAAATGATCTGTCTGAACCCCCTAAGC | + |
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Preference number: 3 (lower is better) Translates to: TQRNQDLFPNFT*GSQMICLNPLS Trigger: GCTTAGGGGGTTCAGACAGATCATTTGACTGCCCCAGGTGAAGTTTGGAAACAAATCTTGGTTTCTCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | CACAGCCAACATAGCAATAATACTTCTGGTTTTTGCTaGACTCTCAAGAACTCACTTCTCTTTCCCCGTGTC | + |
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Preference number: 3 (lower is better) Translates to: HSQHSNNTSGFC*TLKNSLLFPRV Trigger: GACACGGGGAAAGAGAAGTGAGTTCTTGAGAGTTCAGCAAAAACCAGAAGTATTATTGCTATGTTGGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CAA 90 bp | AATACAGTGGCGCCAAGTTCATGTGAACCTGAAGACTATATAATCCAGTCATACCCAACAGAAAACATATaGTGTGTCAGCGATGACCCA | + |
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Preference number: 3 (lower is better) Translates to: NTVAPSSCEPEDYIIQSYPTENI*CVSDDP Trigger: TGGGTCATCGCTGACACACAATATGTTTTCTGTTGG...GTATGACTGGATTATATAGTCTTCAGGTTCACATGAACTTGGCGCCACTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CCA 72 bp | TCGGTAAGACGTGTTACTGAACAGATGAGGCTAACTTaGTGGAAAACGGTCTCAATGTTATCAGAATACAGT | + |
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Preference number: 3 (lower is better) Translates to: SVRRVTEQMRLT*WKTVSMLSEYS Trigger: ACTGTATTCTGATAACATTGAGACCGTTTTCCACCAAGTTAGCCTCATCTGTTCAGTAACACGTCTTACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAAACCAAGATTTGTTTCCAAACTTCACCTGGGGCAGTCAAATGATCTGTAAGAGTATAACAACATaGAAAGGAACCCACAATGCT | + |
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Preference number: 3 (lower is better) Translates to: QRNQDLFPNFTWGSQMICKSITT*KGTHNA Trigger: AGCATTGTGGGTTCCTTTCAATGTTGTTATACTCTT...ACAGATCATTTGACTGCCCCAGGTGAAGTTTGGAAACAAATCTTGGTTTCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | TCTCTTCTGCCCAGCCACTGGATGGTCAGCATTCATTaGGAGAGAATAAATGGTAAGAATTATTGTACAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLLPSHWMVSIH*ERINGKNYCTN Trigger: GTTTGTACAATAATTCTTACCATTTATTCTCTCTCAATGAATGCTGACCATCCAGTGGCTGGGCAGAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR TCA 72 bp | AGCTCATTATGTAAACAGACTACTTACTATCTAAAGTaGTCGAGCAATCGTACGTTGAGTGTTCACAACAGG | + |
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Preference number: 3 (lower is better) Translates to: SSLCKQTTYYLK*SSNRTLSVHNR Trigger: CCTGTTGTGAACACTCAACGTACGATTGCTCGATCACTTTAGATAGTAAGTAGTCTGTTTACATAATGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGCTACCAGTGCGCCGGTaGGCCAGGAAAAGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PQLATSLLCQSPGKLQTLLPVRR*ARKREP Trigger: AGGCTCCCTTTTCCTGGCCCACCGGCGCACTGGTAG...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | GCTCAGGCCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGCAATGTTCTCCGGCTaGTCCAGCCACAGCGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AQASVSHITPMSEPREVAAMFSG*SSHSVW Trigger: CCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGC...TGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGGCCTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAGGTGCAAGGCTGCTGTaGCGGCGTGACAAGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: ITPMSEPREVADPGQSILGARLL*RRDKPA Trigger: CGCAGGCTTGTCACGCCGCCACAGCAGCCTTGCACC...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGAGCCTGCGCTACCAGTaGGCCGGTGGGCCAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWSLRYQ*AGGPGK Trigger: TTTTCCTGGCCCACCGGCGCACTGGTAGCGCAGGCT...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR TCA 90 bp | CCCTTGGATGGTAGAAGTCCCACCCTTATTCTCTCTTCTGCCCAGCCACTGGATAGCATGCCATCTTCCTaGTCATCAGACTGGCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: PLDGRSPTLILSSAQPLDSMPSS*SSDWPD Trigger: GTCCGGCCAGTCTGATGATCAGGAAGATGGCATGCT...ATCCAGTGGCTGGGCAGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGCTCCACCCCAGAGCATaGCATCTTCCTGATCATCAG | + |
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Preference number: 4 (lower is better) Translates to: PQLATSLLCQSPGKLQTLLHPRA*HLPDHQ Trigger: CTGATGATCAGGAAGATGGCATGCTCTGGGGTGGAG...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGTGGTCAATGTTCTTCTaGTGCAGGGTCTCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQLATSLLCQSPGKLQTLWSMFF*CRVSAS Trigger: GCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCA...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGGATGGTAGAAGTCCCACCCTTATTCTCTCTTCTGCCCAGCCACTGGATCTGTACAAGGATCTGTaGCTCCACCCCAGAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLDGRSPTLILSSAQPLDLYKDL*LHPRAC Trigger: GCATGCTCTGGGGTGGAGCCACAGATCCTTGTACAG...ATCCAGTGGCTGGGCAGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGATGAAGGTGCAAGGCTaGTGTGGCGGCGTGACAAGC | + |
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Preference number: 4 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWMKVQG*CGGVTS Trigger: GCTTGTCACGCCGCCACAGCAGCCTTGCACCTTCAT...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGGATGGTAGAAGTCCCACCCTTATTCTCTCTTCTGCCCAGCCACTGGATTCCAGCCACAGCGTGTaGTCAATGTTCTTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLDGRSPTLILSSAQPLDSSHSV*SMFFCC Trigger: GCAGCAGAAGAACATTGACCACACGCTGTGGCTGGA...ATCCAGTGGCTGGGCAGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR TCA 90 bp | CAGAGAAACCAAGATTTGTTTCCAAACTTCACCTGGGGCAGTCAAATGATCTGTGCTGCTGTGGCGGCGTaGCAAGCCTGCGCTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: QRNQDLFPNFTWGSQMICAAVAA*QACATS Trigger: ACTGGTAGCGCAGGCTTGTCACGCCGCCACAGCAGC...ACAGATCATTTGACTGCCCCAGGTGAAGTTTGGAAACAAATCTTGGTTTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | CCCACAGATAATAGTGATGCTTATCCACTCTCCTCACTTGAACTTAGTGGCAATCCTCGAGAACCACCTTaGGCATGCGCCCCAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTDNSDAYPLSSLELSGNPREPP*ACAPAP Trigger: GGGAGCTGGGGCGCATGCGCAAGGTGGTTCTCGAGG...ATTGCCACTAAGTTCAAGTGAGGAGAGTGGATAAGCATCACTATTATCTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR TCA 90 bp | CCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGCAGGAAAAGGGAGCCTaGGATAGATCCTTTCGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQLATSLLCQSPGKLQTLQEKGA*DRSFRN Trigger: ATTACGAAAGGATCTATCTCAGGCTCCCTTTTCCTG...CAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | TCTAACAAAAGCTTAAGCTGGTGTGGCTGTGCACACCTTCAATCCCAGCACTGGATGGCCTCAGGGCTATaGATGTGGCAATGTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SNKSLSWCGCAHLQSQHWMASGL*MWQCSP Trigger: CGGAGAACATTGCCACATGCATAGCCCTGAGGCCAT...CCAGTGCTGGGATTGAAGGTGTGCACAGCCACACCAGCTTAAGCTTTTGTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| 3UTR CAA 72 bp | GTCAGATCTACAACTCGCTTCCTCTCTCCCAGTCCCTaGGATGGTAGAAGTCCCACCCTTATTCTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VRSTTRFLSPSP*DGRSPTLILSS Trigger: AGAAGAGAGAATAAGGGTGGGACTTCTACCATCCAAGGGACTGGGAGAGAGGAAGCGAGTTGTAGATCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | CAGAGAAACCAAGATTTGTTTCCAAACTTCACCTGGGGCAGTCAAATGATCTGTGGCTCACTTCTTCCTTaGGGTATGGCCTCAGGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QRNQDLFPNFTWGSQMICGSLLP*GMASGL Trigger: TAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCC...ACAGATCATTTGACTGCCCCAGGTGAAGTTTGGAAACAAATCTTGGTTTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CCA 90 bp | ATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGACCCTGGACAGAGCATTCTAAACTTCTTCAAATACTaGCTCACTTCTTCCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ITPMSEPREVADPGQSILNFFKY*LTSSLG Trigger: CCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAGTT...TAGAATGCTCTGTCCAGGGTCTGCAACTTCCCTGGGCTCTGACATAGGAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR GCA 90 bp | TACAAACTTGTCATGTACAGATGTTTAGGGAGGGGAGTAATTCTTGGCTGGAAGTCAATGTTCTTCTGCTaGAGGGTCTCAGCCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLVMYRCLGRGVILGWKSMFFC*RVSASS Trigger: GGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGA...CTTCCAGCCAAGAATTACTCCCCTCCCTAAACATCTGTACATGACAAGTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 90 bp | AAGCTGCCGTGTGCGGATGGTCTCGATGAAGGTGCAAGGCTGCTGTaGCGGCGTGACAAGCCTGCGCTACCAGTGCGCCGGTGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLPCADGLDEGARLL*RRDKPALPVRRWAR Trigger: CCTGGCCCACCGGCGCACTGGTAGCGCAGGCTTGTCACGCCGCCACAGCAGCCTTGCACCTTCATCGAGACCATCCGCACACGGCAGCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | GAGATAAGCTGCCGTGTGCGGATGGTCTCGATGAAGGTGCAAGGCTaGTGTGGCGGCGTGACAAGCCTGCGCTACCAGTGCGCCGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EISCRVRMVSMKVQG*CGGVTSLRYQCAGG Trigger: CCCACCGGCGCACTGGTAGCGCAGGCTTGTCACGCCGCCACAGCAGCCTTGCACCTTCATCGAGACCATCCGCACACGGCAGCTTATCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | CCAGCTCCTTCAAGGTGGTCTCATCAGCAGCCTCGAGAACCACCTTaGGCATGCGCCCCAGCTCCCGGAGATAAGCTGCCGTGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAPSRWSHQQPREPP*ACAPAPGDKLPCAD Trigger: ATCCGCACACGGCAGCTTATCTCCGGGAGCTGGGGCGCATGCGCAAGGTGGTTCTCGAGGCTGCTGATGAGACCACCTTGAAGGAGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS-3UTR CAA 90 bp | GCTCAGGCCTCAGTTAGCCACATCACTCCTATGTCAGAGCCCAGGGAAGTTGCAGCCTCGAGAACCACCTaGCGCATGCGCCCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQASVSHITPMSEPREVAASRTT*RMRPSS Trigger: GGAGCTGGGGCGCATGCGCAAGGTGGTTCTCGAGGC...TGCAACTTCCCTGGGCTCTGACATAGGAGTGATGTGGCTAACTGAGGCCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | TTCTCCGGCTGCTCCAGCCACAGCGTGTGGTCAATGTTCTTCTGCTaGAGGGTCTCAGCCAGCTCCTTCAAGGTGGTCTCATCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSGCSSHSVWSMFFC*RVSASSFKVVSSAA Trigger: GGCTGCTGATGAGACCACCTTGAAGGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | TTGGGGTATGGCCTCAGGGCTATGCATGTGGCAATGTTCTCCGGCTaGTCCAGCCACAGCGTGTGGTCAATGTTCTTCTGCTGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGYGLRAMHVAMFSG*SSHSVWSMFFCCRV Trigger: GACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | ATGTTCTCCGGCTGCTCCAGCCACAGCGTGTGGTCAATGTTCTTCTaGTGCAGGGTCTCAGCCAGCTCCTTCAAGGTGGTCTCATCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MFSGCSSHSVWSMFF*CRVSASSFKVVSSA Trigger: TGCTGATGAGACCACCTTGAAGGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 90 bp | GCTATGCATGTGGCAATGTTCTCCGGCTGCTCCAGCCACAGCGTGTaGTCAATGTTCTTCTGCTGCAGGGTCTCAGCCAGCTCCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AMHVAMFSGCSSHSV*SMFFCCRVSASSFK Trigger: CTTGAAGGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGCCACATGCATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 90 bp | TCAAATACTGGCTCACTTCTTCCTTGGGGTATGGCCTCAGGGCTATaGATGTGGCAATGTTCTCCGGCTGCTCCAGCCACAGCGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNTGSLLPWGMASGL*MWQCSPAAPATACG Trigger: ACCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS TCA 90 bp | CAAGCCTGCGCTACCAGTGCGCCGGTGGGCCAGGAAAAGGGAGCCTaGGATAGATCCTTTCGTAATACTAAGTACTGTACAAGGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QACATSAPVGQEKGA*DRSFRNTKYCTRIC Trigger: ACAGATCCTTGTACAGTACTTAGTATTACGAAAGGATCTATCTCAGGCTCCCTTTTCCTGGCCCACCGGCGCACTGGTAGCGCAGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 90 bp | CAATCGGAACTTCTTCAAATACTGGCTCACTTCTTCCTTGGGGTATaGCCTCAGGGCTATGCATGTGGCAATGTTCTCCGGCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QSELLQILAHFFLGV*PQGYACGNVLRLLQ Trigger: CTGGAGCAGCCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAGTTCCGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 72 bp | TGTGCGGATGGTCTCGATGAAGGTGCAAGGCTGCTGTaGCGGCGTGACAAGCCTGCGCTACCAGTGCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CADGLDEGARLL*RRDKPALPVRR Trigger: CCGGCGCACTGGTAGCGCAGGCTTGTCACGCCGCCACAGCAGCCTTGCACCTTCATCGAGACCATCCGCACA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | TGCCGTGTGCGGATGGTCTCGATGAAGGTGCAAGGCTaGTGTGGCGGCGTGACAAGCCTGCGCTACCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CRVRMVSMKVQG*CGGVTSLRYQC Trigger: GCACTGGTAGCGCAGGCTTGTCACGCCGCCACAGCAGCCTTGCACCTTCATCGAGACCATCCGCACACGGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | TCAAGGTGGTCTCATCAGCAGCCTCGAGAACCACCTTaGGCATGCGCCCCAGCTCCCGGAGATAAGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRWSHQQPREPP*ACAPAPGDKLP Trigger: CGGCAGCTTATCTCCGGGAGCTGGGGCGCATGCGCAAGGTGGTTCTCGAGGCTGCTGATGAGACCACCTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | GGCTGCTCCAGCCACAGCGTGTGGTCAATGTTCTTCTaGTGCAGGGTCTCAGCCAGCTCCTTCAAGGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSHSVWSMFF*CRVSASSFKVV Trigger: GACCACCTTGAAGGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 72 bp | GTGGCAATGTTCTCCGGCTGCTCCAGCCACAGCGTGTaGTCAATGTTCTTCTGCTGCAGGGTCTCAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VAMFSGCSSHSV*SMFFCCRVSAS Trigger: GCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | GGCCTCAGGGCTATGCATGTGGCAATGTTCTCCGGCTaGTCCAGCCACAGCGTGTGGTCAATGTTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRAMHVAMFSG*SSHSVWSMFFC Trigger: GCAGAAGAACATTGACCACACGCTGTGGCTGGAGCAGCCGGAGAACATTGCCACATGCATAGCCCTGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | GGCTCACTTCTTCCTTGGGGTATGGCCTCAGGGCTATaGATGTGGCAATGTTCTCCGGCTGCTCCAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GSLLPWGMASGL*MWQCSPAAPAT Trigger: TGTGGCTGGAGCAGCCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS GCA 72 bp | TGCTCCAGCCACAGCGTGTGGTCAATGTTCTTCTGCTaGAGGGTCTCAGCCAGCTCCTTCAAGGTGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSSHSVWSMFFC*RVSASSFKVVS Trigger: TGAGACCACCTTGAAGGAGCTGGCTGAGACCCTGCAGCAGAAGAACATTGACCACACGCTGTGGCTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS TCA 72 bp | GCTACCAGTGCGCCGGTGGGCCAGGAAAAGGGAGCCTaGGATAGATCCTTTCGTAATACTAAGTACTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: ATSAPVGQEKGA*DRSFRNTKYCT Trigger: TGTACAGTACTTAGTATTACGAAAGGATCTATCTCAGGCTCCCTTTTCCTGGCCCACCGGCGCACTGGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 72 bp | CTTCTTCAAATACTGGCTCACTTCTTCCTTGGGGTATaGCCTCAGGGCTATGCATGTGGCAATGTTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQILAHFFLGV*PQGYACGNVLR Trigger: CCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CAA 90 bp | CACTTGAACAATCGGAACTTCTTCAAATACTGGCTCACTTCTTCCTaGGGGTATGGCCTCAGGGCTATGCATGTGGCAATGTTCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HLNNRNFFKYWLTSS*GYGLRAMHVAMFSG Trigger: GCCGGAGAACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAGTTCCGATTGTTCAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CCA 72 bp | ATCGGAACTTCTTCAAATACTGGCTCACTTCTTCCTTaGGGTATGGCCTCAGGGCTATGCATGTGGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: IGTSSNTGSLLP*GMASGLCMWQC Trigger: ACATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAGTTCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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| CDS CAA 72 bp | AATCGGAACTTCTTCAAATACTGGCTCACTTCTTCCTaGGGGTATGGCCTCAGGGCTATGCATGTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: NRNFFKYWLTSS*GYGLRAMHVAM Trigger: CATTGCCACATGCATAGCCCTGAGGCCATACCCCAAGGAAGAAGTGAGCCAGTATTTGAAGAAGTTCCGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179139.3 |
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