Pregenerated sensors for PTRH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072582Ensembl transcript IDs: ENSMUST00000108021.2, ENSMUST00000108022.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATGGGCCACCTACCAAGGAGGACTTCCCTAAAGACTTCTTATTaGCCAGCTTTCAGTTCCCAAAGCCCTTCCCCTACCTACGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SMGHLPRRTSLKTSY*PAFSSQSPSPTYAG Trigger: CCCAGCGTAGGTAGGGGAAGGGCTTTGGGAACTGAAAGCTGGGCAATAAGAAGTCTTTAGGGAAGTCCTCCTTGGTAGGTGGCCCATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 90 bp | CTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTTaGAAGCATGTGGGGCCATCTACAGGAGCATGGGCCACCTACCAA | + |
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Preference number: 1 (lower is better) Translates to: LFHNSALSSINADTV*KHVGPSTGAWATYQ Trigger: TTGGTAGGTGGCCCATGCTCCTGTAGATGGCCCCACATGCTTTCAAACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 90 bp | TCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGTTTaGGACCCTATCACTCCACAGGAGCATTTAGAGAATGTATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: SHPASLQALSHFQSV*DPITPQEHLENVFL Trigger: TAAAAATACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR GCA 90 bp | GTTGCATCACTTGACTCATGTATAAACATTCTGTCTAGAAACTGTTaGTACTGTGGCATCATTCAGTGTTGCGATTGGTCCTGTACCATT | + |
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Preference number: 1 (lower is better) Translates to: VASLDSCINILSRNC*YCGIIQCCDWSCTI Trigger: AATGGTACAGGACCAATCGCAACACTGAATGATGCCACAGTAGCAACAGTTTCTAGACAGAATGTTTATACATGAGTCAAGTGATGCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CAA 90 bp | GAGCATGGGCCACCTACCAAGGAGGACTTCCCTAAAGACTTCTTATaGCCCAGCTTTCAGTTCCCAAAGCCCTTCCCCTACCTACGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EHGPPTKEDFPKDFL*PSFQFPKPFPYLRW Trigger: CCAGCGTAGGTAGGGGAAGGGCTTTGGGAACTGAAAGCTGGGCAATAAGAAGTCTTTAGGGAAGTCCTCCTTGGTAGGTGGCCCATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACTCCATCCCTCCCAGGTaGGAGGTCAAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSQVDLFHNSALSSINADSIPPR*EVKAGG Trigger: TCCTCCTGCCTTGACCTCCCACCTGGGAGGGATGGA...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGGCACTGTCTCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCTGTATACCTTGTGGTTaGGAGGGTGTTGGATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: YRHCLTSNLFETLSLHRSCIPCG*EGVGFP Trigger: AGGGAATCCAACACCCTCTCAACCACAAGGTATACA...GCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CAA 90 bp | GTCACCAGAATTAACAAGTTTTACTATGTCCTTGTAAGGCCCAGCTaGTTACAGGTCATTGAATCAGCCACCCCAGCTGGGAATCTAGTC | + |
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Preference number: 2 (lower is better) Translates to: VTRINKFYYVLVRPS*LQVIESATPAGNLV Trigger: GACTAGATTCCCAGCTGGGGTGGCTGATTCAATGACCTGTAACAAGCTGGGCCTTACAAGGACATAGTAAAACTTGTTAATTCTGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CAA 90 bp | ATCAGCCACCCCAGCTGGGAATCTAGTCTTTTAGTGTGGAACCATTaGTCTGCAGCAAGCCTCATAAATTACCTGAGTCATAACCATGTA | + |
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Preference number: 2 (lower is better) Translates to: ISHPSWESSLLVWNH*SAASLINYLSHNHV Trigger: TACATGGTTATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTTCCACACTAAAAGACTAGATTCCCAGCTGGGGTGGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACGGGTGTTGGATTCCCTaGAACTGGATCTGGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHGCWIP*NWIWML Trigger: AAGCATCCAGATCCAGTTCCAGGGAATCCAACACCC...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACCACTTCCAATCTGTTTaGGACCCTATCACTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHHFQSV*DPITPQ Trigger: CTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTG...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACCTTCATCAGGCCAAGTaGGACTTTATTGTGAATGTG | + |
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Preference number: 2 (lower is better) Translates to: PSQVDLFHNSALSSINADLHQAK*DFIVNV Trigger: CACATTCACAATAAAGTCTCACTTGGCCTGATGAAG...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACATTTCTAGGAGAAACTaGCTGGGTACAGTTACAGTC | + |
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Preference number: 2 (lower is better) Translates to: PSQVDLFHNSALSSINADISRRN*LGTVTV Trigger: GACTGTAACTGTACCCAGCCAGTTTCTCCTAGAAAT...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | AACCATTTGTCTGCAGCAAGCCTCATAAATTACCTGAGTCATAACCATGTATTTGGGTGTTGGATTCCCTaGAACTGGATCTGGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: NHLSAASLINYLSHNHVFGCWIP*NWIWML Trigger: AAGCATCCAGATCCAGTTCCAGGGAATCCAACACCC...AAATACATGGTTATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTCATAACCATGTATTTAAGATTGAGTTCTACTCAGTTACATGTGGTTGCTGTATACCTTGTGGTTaGGAGGGTGTTGGATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSHNHVFKIEFYSVTCGCCIPCG*EGVGFP Trigger: AGGGAATCCAACACCCTCTCAACCACAAGGTATACA...GCAACCACATGTAACTGAGTAGAACTCAATCTTAAATACATGGTTATGACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTCTGTCTAGAAACTGTTaGTACTGTGGCATCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: QVDLFHNSALSSINADTVLSRNC*YCGIIQ Trigger: CTGAATGATGCCACAGTAGCAACAGTTTCTAGACAG...AACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTACTGCTCTTTTTAACTaGTTCATCAGGCCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: QVDLFHNSALSSINADTVTALFN*FIRPSE Trigger: CTCACTTGGCCTGATGAAGCAGTTAAAAAGAGCAGT...AACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACCATGATAGAGGAACATaGGAACAGACTTTAAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHHDRGT*EQTLKW Trigger: CCACTTTAAAGTCTGTTCCCATGTTCCTCTATCATG...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTCATGATAGAGGAACATaGGAACAGACTTTAAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: QVDLFHNSALSSINADTVHDRGT*EQTLKW Trigger: CCACTTTAAAGTCTGTTCCCATGTTCCTCTATCATG...AACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACCAAAGGACAACAGCATaGTTTGAGAAAAGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHQRTTA*FEKRVI Trigger: GATTACTCTTTTCTCAAACCATGCTGTTGTCCTTTG...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGAAATTTTCATACAAGTATACAGTGTACTATATGAGCCTAGCACCCCAAGAGTTCAATCAATGCTaGCACTGTTTGAAAGCATGT | + |
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Preference number: 2 (lower is better) Translates to: LLKFSYKYTVYYMSLAPQEFNQC*HCLKAC Trigger: ACATGCTTTCAAACAGTGTCAGCATTGATTGAACTC...TTGGGGTGCTAGGCTCATATAGTACACTGTATACTTGTATGAAAATTTCAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CAA 90 bp | GACCCTATCACTCCACAGGAGCATTTAGAGAATGTATTTTTATTCTaGAGACTTCCTTTTTCTTTATGTACTCTTTGGATGTTTGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: DPITPQEHLENVFLF*RLPFSLCTLWMFED Trigger: GTCCTCAAACATCCAAAGAGTACATAAAGAAAAAGGAAGTCTCAAGAATAAAAATACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGAAATTTTCATACAAGTATACAGTGTACTATATGAGCCTAGCACCCCAATTGTCTTCATCATTCTaGTTAGTTCCTACTTACGGT | + |
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Preference number: 2 (lower is better) Translates to: LLKFSYKYTVYYMSLAPQLSSSF*LVPTYG Trigger: ACCGTAAGTAGGAACTAAGCAGAATGATGAAGACAA...TTGGGGTGCTAGGCTCATATAGTACACTGTATACTTGTATGAAAATTTCAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGAAATTTTCATACAAGTATACAGTGTACTATATGAGCCTAGCACCCCAATCTTTATGTACTCTTTaGATGTTTGAGGACTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LLKFSYKYTVYYMSLAPQSLCTL*MFEDLP Trigger: AGGCAAGTCCTCAAACATCCAAAGAGTACATAAAGA...TTGGGGTGCTAGGCTCATATAGTACACTGTATACTTGTATGAAAATTTCAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CCA 90 bp | AACCATTTGTCTGCAGCAAGCCTCATAAATTACCTGAGTCATAACCATGTATTTCAAAGGACAACAGCATaGTTTGAGAAAAGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: NHLSAASLINYLSHNHVFQRTTA*FEKRVI Trigger: GATTACTCTTTTCTCAAACCATGCTGTTGTCCTTTG...AAATACATGGTTATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CAA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGCTGAACCAGCATCCTTaGCAAGAGGAACAAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLLNQHP*QEEQVP Trigger: GGGCACTTGTTCCTCTTGCAAAGGATGCTGGTTCAG...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CAA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGGTGTATACCTTGTGGTaGAGAGGGTGTTGGATTCCC | + |
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Preference number: 3 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLVYTLW*RGCWIP Trigger: GGGAATCCAACACCCTCTCAACCACAAGGTATACAC...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 72 bp | AACAGTGCACTGAGTTCAATCAATGCTGACACTGTTTaGAAGCATGTGGGGCCATCTACAGGAGCATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: NSALSSINADTV*KHVGPSTGAWA Trigger: GGCCCATGCTCCTGTAGATGGCCCCACATGCTTTCAAACAGTGTCAGCATTGATTGAACTCAGTGCACTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CCA 72 bp | ATGTGGGCTGAGGAATCTGATGGTTCCTTGTTCATGTaGACCATCAGCAGGAACACACTAGAACCGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: MWAEESDGSLFM*TISRNTLEPGI Trigger: GATTCCCGGTTCTAGTGTGTTCCTGCTGATGGTCCACATGAACAAGGAACCATCAGATTCCTCAGCCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACCTGAACCAGCATCCTTaGCAAGAGGAACAAGTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PSQVDLFHNSALSSINADLNQHP*QEEQVP Trigger: GGGCACTTGTTCCTCTTGCAAAGGATGCTGGTTCAG...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACGTACTCTTTGGATGTTaGAGGACTTGCCTGCGTGTA | + |
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Preference number: 3 (lower is better) Translates to: PSQVDLFHNSALSSINADVLFGC*RTCLRV Trigger: TACACGCAGGCAAGTCCTCAAACATCCAAAGAGTAC...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 72 bp | GCGTCATTACAGGCACTGTCTCACTTCCAATCTGTTTaGGACCCTATCACTCCACAGGAGCATTTAGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: ASLQALSHFQSV*DPITPQEHLEN Trigger: ATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTAATGACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR GCA 72 bp | TCTAGAAACTGTTGCTACTGTGGCATCATTCAGTGTTaGGATTGGTCCTGTACCATTTATGCTTCCGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: SRNCCYCGIIQC*DWSCTIYASVG Trigger: TCCTACGGAAGCATAAATGGTACAGGACCAATCGCAACACTGAATGATGCCACAGTAGCAACAGTTTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CCA 72 bp | ATGTATACTGTGTATACCTTGTGGTTGAGAGGGTGTTaGATTCCCTGGAACTGGATCTGGATGCTTGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: MYTVYTLWLRGC*IPWNWIWMLVN Trigger: GTTTACAAGCATCCAGATCCAGTTCCAGGGAATCCAACACCCTCTCAACCACAAGGTATACACAGTATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 72 bp | TTTAACTGCTTCATCAGGCCAAGTGAGACTTTATTGTaGATGTGGGCTGAGGAATCTGATGGTTCCTTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FNCFIRPSETLL*MWAEESDGSLF Trigger: GAACAAGGAACCATCAGATTCCTCAGCCCACATTCACAATAAAGTCTCACTTGGCCTGATGAAGCAGTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 72 bp | TTTGAAATAGAAATGAATTTAGAGAGTAGCTGGGTATaGTGGTTCATAACTTCCATCCCTCCCAGGTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: FEIEMNLESSWV*WFITSIPPRWE Trigger: CTCCCACCTGGGAGGGATGGAAGTTATGAACCATCATACCCAGCTACTCTCTAAATTCATTTCTATTTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR GCA 72 bp | CTTGACTCATGTATAAACATTCTGTCTAGAAACTGTTaGTACTGTGGCATCATTCAGTGTTGCGATTGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LDSCINILSRNC*YCGIIQCCDWS Trigger: GGACCAATCGCAACACTGAATGATGCCACAGTAGCAACAGTTTCTAGACAGAATGTTTATACATGAGTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR-3UTR CAA 90 bp | AACCATTTGTCTGCAGCAAGCCTCATAAATTACCTGAGTCATAACCATGTATTTACTAAGCACTTTAACTaGGAGACTGCCTACAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: NHLSAASLINYLSHNHVFTKHFN*ETAYSC Trigger: ACAACTGTAGGCAGTCTCCAAGTTAAAGTGCTTAGT...AAATACATGGTTATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR TCA 72 bp | CCTCTTGTTTCAGTAAAAATGTTCTATGAAGTTAGCTaGGCTCACAAACTAGACAACAGCCCTTTAGACAAA | + |
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Preference number: 3 (lower is better) Translates to: PLVSVKMFYEVS*AHKLDNSPLDK Trigger: TTTGTCTAAAGGGCTGTTGTCTAGTTTGTGAGCTCAGCTAACTTCATAGAACATTTTTACTGAAACAAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CCA 72 bp | TTATTCTTGAGACTTCCTTTTTCTTTATGTACTCTTTaGATGTTTGAGGACTTGCCTGCGTGTATATATGTA | + |
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Preference number: 3 (lower is better) Translates to: LFLRLPFSLCTL*MFEDLPACIYV Trigger: TACATATATACACGCAGGCAAGTCCTCAAACATCCAAAGAGTACATAAAGAAAAAGGAAGTCTCAAGAATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS-3UTR TCA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGCTTCATCTGGAGCTTTaGCCACCACTTTGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLLHLEL*PPLWAG Trigger: GCCAGCCCAAAGTGGTGGTCAAAGCTCCAGATGAAG...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS-3UTR TCA 90 bp | TACAGGCACTGTCTCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCGCAGACACGGCAGCATaGGAACACTGGGCAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: YRHCLTSNLFETLSLHRSADTAA*EHWAAT Trigger: GGTTGCTGCCCAGTGTTCTCATGCTGCCGTGTCTGC...GCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS-3UTR CCA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACGGGAACATCCCAAGGTaGCTCCGGAGGCCCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PSQVDLFHNSALSSINADGNIPR*LRRPQP Trigger: GGGCTGGGGCCTCCGGAGCCACCTTGGGATGTTCCC...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS-3UTR TCA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGGAACCTGGTTCAATCTaGGTACGTCCAGCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLEPGSI*VRPASW Trigger: CCAAGATGCTGGACGTACTCAGATTGAACCAGGTTC...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| 3UTR CAA 72 bp | CCACCTACCAAGGAGGACTTCCCTAAAGACTTCTTATaGCCCAGCTTTCAGTTCCCAAAGCCCTTCCCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPTKEDFPKDFL*PSFQFPKPFPY Trigger: GTAGGGGAAGGGCTTTGGGAACTGAAAGCTGGGCAATAAGAAGTCTTTAGGGAAGTCCTCCTTGGTAGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTCATAACCATGTATTTAAGATTGAGTTCTACTCAGTTACATGTGGTTGCGGGAACATCCCAAGGTaGCTCCGGAGGCCCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHNHVFKIEFYSVTCGCGNIPR*LRRPQP Trigger: GGGCTGGGGCCTCCGGAGCCACCTTGGGATGTTCCC...GCAACCACATGTAACTGAGTAGAACTCAATCTTAAATACATGGTTATGACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGCACTGTCTCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCTCACTTGTTGAGTTCTaGGGGAACATCCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRHCLTSNLFETLSLHRSSLVEF*GNIPRW Trigger: CCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGA...GCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCTCAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACCTTCATCTGGAGCTTTaGCCACCACTTTGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSQVDLFHNSALSSINADLHLEL*PPLWAG Trigger: GCCAGCCCAAAGTGGTGGTCAAAGCTCCAGATGAAG...GTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTGAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTCATAACCATGTATTTAAGATTGAGTTCTACTCAGTTACATGTGGTTGCGCAGACACGGCAGCATaGGAACACTGGGCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSHNHVFKIEFYSVTCGCADTAA*EHWAAT Trigger: GGTTGCTGCCCAGTGTTCTCATGCTGCCGTGTCTGC...GCAACCACATGTAACTGAGTAGAACTCAATCTTAAATACATGGTTATGACTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCATTTAGAGAATGTAGTACTCCCACTCTTTaGGCACTTGAGGGCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPICLRPYHSTGAFRECSTPTL*ALEGFS Trigger: GGAGAAGCCCTCAAGTGCTCAAAGAGTGGGAGTACT...ACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | CTGAACCAGCATCCTTTGCAAGAGGAACAAGTGCCCTTAATCACTGAGGAATCTGACAGTTCGAGAACCTaGTTCAATCTGAGTACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNQHPLQEEQVPLITEESDSSRT*FNLSTS Trigger: GGACGTACTCAGATTGAACCAGGTTCTCGAACTGTC...AGATTCCTCAGTGATTAAGGGCACTTGTTCCTCTTGCAAAGGATGCTGGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCATTTAGAGAATGTTCACTTGTTGAGTTCTaGGGGAACATCCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPICLRPYHSTGAFRECSLVEF*GNIPRW Trigger: CCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGA...ACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| 3UTR CAA 72 bp | AGCGTCATTACAGGCACTGTCTCACTTCCAATCTGTTaGAGACCCTATCACTCCACAGGAGCATTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVITGTVSLPIC*RPYHSTGAFRE Trigger: TTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGAGACAGTGCCTGTAATGACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCATTTAGAGAATGTGAGGGTGTCTTCATCTaGAGCTTTGACCACCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPICLRPYHSTGAFRECEGVFI*SFDHHF Trigger: AAAGTGGTGGTCAAAGCTCCAGATGAAGACACCCTC...ACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| 3UTR CAA 72 bp | CCCAGCTGGGAATCTAGTCTTTTAGTGTGGAACCATTaGTCTGCAGCAAGCCTCATAAATTACCTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSWESSLLVWNH*SAASLINYLSH Trigger: ATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTTCCACACTAAAAGACTAGATTCCCAGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCCAATCTGTTTGAGACCCTATCACTCCACAGGAGCATTTAGAGAATGTCTGAGTGTACCAGGATaGACCAAATACTCCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPICLRPYHSTGAFRECLSVPG*TKYSIV Trigger: GACTATGGAGTATTTGGTTCATCCTGGTACACTCAG...ACATTCTCTAAATGCTCCTGTGGAGTGATAGGGTCTCAAACAGATTGGAAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTCTCTCCCAAGATGCTTaGTTCAGTTCCAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVDLFHNSALSSINADTVLSQDA*FSSSLC Trigger: ACAGAGACTGGAACTGAAGCAAGCATCTTGGGAGAG...AACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACCACTCTCTCCCAAGATaGTTGCTTCAGTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHHSLPR*LLQFQS Trigger: AGACTGGAACTGAAGCAAGCATCTTGGGAGAGAGTG...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| 3UTR CAA 72 bp | TATGTATACTGTGTATACCTTGTGGTTGAGAGGGTGTaGGATTCCCTGGAACTGGATCTGGATGCTTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YVYCVYLVVERV*DSLELDLDACK Trigger: TTTACAAGCATCCAGATCCAGTTCCAGGGAATCCAACACCCTCTCAACCACAAGGTATACACAGTATACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACCTGAGTGTACCAGGATaGACCAAATACTCCATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHLSVPG*TKYSIV Trigger: GACTATGGAGTATTTGGTTCATCCTGGTACACTCAG...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| 3UTR CAA 72 bp | AAACTGTTGCTACTGTGGCATCATTCAGTGTTGCGATaGGTCCTGTACCATTTATGCTTCCGTAGGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLLLWHHSVLR*VLYHLCFRRIK Trigger: TTTTATCCTACGGAAGCATAAATGGTACAGGACCAATCGCAACACTGAATGATGCCACAGTAGCAACAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGAATTAAGCATTTATTGTTACTGACAGGCTCCATAGTCTTCGGACAGAATCACTCTCTCCCAAGATaGTTGCTTCAGTTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRIKHLLLLTGSIVFGQNHSLPR*LLQFQS Trigger: AGACTGGAACTGAAGCAAGCATCTTGGGAGAGAGTG...ATTCTGTCCGAAGACTATGGAGCCTGTCAGTAACAATAAATGCTTAATTCTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAAATTTTCATACAAGTATACAGTGTACTATATGAGCCTAGCACCCCAAGACAGTTCGAGAACCTaGTTCAATCTGAGTACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKFSYKYTVYYMSLAPQDSSRT*FNLSTS Trigger: GGACGTACTCAGATTGAACCAGGTTCTCGAACTGTC...TTGGGGTGCTAGGCTCATATAGTACACTGTATACTTGTATGAAAATTTCAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCATCATTCTGCTTAGTTCCTACTTACGGTCTTACTTTCCTTAACATCATTCTCTCCCAAGATGCTTaGTTCAGTTCCAGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSFCLVPTYGLTFLNIILSQDA*FSSSLC Trigger: ACAGAGACTGGAACTGAAGCAAGCATCTTGGGAGAG...AATGATGTTAAGGAAAGTAAGACCGTAAGTAGGAACTAAGCAGAATGATGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTTGATCTCTTTCATAACAGTGCACTGAGTTCAATCAATGCTGACACTGTTGTACGTCCAGCATCTTaGATTAAACTTACAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVDLFHNSALSSINADTVVRPAS*IKLTVS Trigger: ACTGACTGTAAGTTTAATCCAAGATGCTGGACGTAC...AACAGTGTCAGCATTGATTGAACTCAGTGCACTGTTATGAAAGAGATCAACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| 3UTR CAA 72 bp | ATACCAAGAGCAGGTGAACCAGAAAAATACCGTGACTaGTCACCAGAATTAACAAGTTTTACTATGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPRAGEPEKYRD*SPELTSFTMSL Trigger: CAAGGACATAGTAAAACTTGTTAATTCTGGTGACAAGTCACGGTATTTTTCTGGTTCACCTGCTCTTGGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAAATTTTCATACAAGTATACAGTGTACTATATGAGCCTAGCACCCCAAGTACGTCCAGCATCTTaGATTAAACTTACAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKFSYKYTVYYMSLAPQVRPAS*IKLTVS Trigger: ACTGACTGTAAGTTTAATCCAAGATGCTGGACGTAC...TTGGGGTGCTAGGCTCATATAGTACACTGTATACTTGTATGAAAATTTCAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CCA 90 bp | TCTCTATTTGCCTCACTTGTTGAGTTCTGGGGGAACATCCCAAGGTaGCTCCGGAGGCCCCAGCCCAGGCACATGCCACAAGCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLFASLVEFWGNIPR*LRRPQPRHMPQATP Trigger: TGGAGTTGCTTGTGGCATGTGCCTGGGCTGGGGCCTCCGGAGCCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGAGGCAAATAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 90 bp | GCTTGCTTCAGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTTGTTaGGTTCTGGGGGAACATCCCAAGGTGGCTCCGGAGGCCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ACFSSSLCVSICLTC*VLGEHPKVAPEAPA Trigger: GGCTGGGGCCTCCGGAGCCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGAGGCAAATAGAGACACAGAGACTGGAACTGAAGCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGTCTTCATCTGGAGCTTaGACCACCACTTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLSSSGA*TTTLGW Trigger: CCAGCCCAAAGTGGTGGTCAAAGCTCCAGATGAAGA...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 90 bp | GGTCCTGGCCCAATTCCCAGGACAGTTCGAGAACCTGGTTCAATCTaGGTACGTCCAGCATCTTGGATTAAACTTACAGTCAGTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGPIPRTVREPGSI*VRPASWIKLTVSPK Trigger: CTTGGGACTGACTGTAAGTTTAATCCAAGATGCTGGACGTACTCAGATTGAACCAGGTTCTCGAACTGTCCTGGGAATTGGGCCAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | CGCAGCCTCCTTCTCACCCAGCGTCATTACAGGCACTGTCTCACTTCCAATCTGTCTCTGTGTCTCTATTaGCCTCACTTGTTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSLLLTQRHYRHCLTSNLSLCLY*PHLLSS Trigger: AGAACTCAACAAGTGAGGCAAATAGAGACACAGAGA...CAGATTGGAAGTGAGACAGTGCCTGTAATGACGCTGGGTGAGAAGGAGGCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | TATACCTTGTGGTTGAGAGGGTGTTGGATTCCCTGGAACTGGATCTGGATGCTTTCTCTCCCAAGATGCTaGCTTCAGTTCCAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTLWLRGCWIPWNWIWMLSLPRC*LQFQSL Trigger: CAGAGACTGGAACTGAAGCAAGCATCTTGGGAGAGA...AAGCATCCAGATCCAGTTCCAGGGAATCCAACACCCTCTCAACCACAAGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | CTGAACCAGCATCCTTTGCAAGAGGAACAAGTGCCCTTAATCACTGAGGAATCTACCACAAGAATCATTTaGTATTCCCCACTCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LNQHPLQEEQVPLITEESTTRII*YSPLSP Trigger: GGGAGAGAGTGGGGAATACAAAATGATTCTTGTGGT...AGATTCCTCAGTGATTAAGGGCACTTGTTCCTCTTGCAAAGGATGCTGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | AACCATTTGTCTGCAGCAAGCCTCATAAATTACCTGAGTCATAACCATGTATTTGCTTTGACCACCACTTaGGGCTGGCCACAGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: NHLSAASLINYLSHNHVFALTTT*GWPQYS Trigger: GGAGTACTGTGGCCAGCCCAAAGTGGTGGTCAAAGC...AAATACATGGTTATGACTCAGGTAATTTATGAGGCTTGCTGCAGACAAATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | ACAAGAATTAAGCATTTATTGTTACTGACAGGCTCCATAGTCTTCGGACAGAATGCTTTGACCACCACTTaGGGCTGGCCACAGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRIKHLLLLTGSIVFGQNALTTT*GWPQYS Trigger: GGAGTACTGTGGCCAGCCCAAAGTGGTGGTCAAAGC...ATTCTGTCCGAAGACTATGGAGCCTGTCAGTAACAATAAATGCTTAATTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS GCA 90 bp | TTCGAACCACAAGAATCATTTTGTATTCCCCACTCTCTCCCAAGATaGTTGCTTCAGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FEPQESFCIPHSLPR*LLQFQSLCLYLPHL Trigger: CAAGTGAGGCAAATAGAGACACAGAGACTGGAACTGAAGCAAGCATCTTGGGAGAGAGTGGGGAATACAAAATGATTCTTGTGGTTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCATCATTCTGCTTAGTTCCTACTTACGGTCTTACTTTCCTTAACATCATTTCTTCATCTGGAGCTTaGACCACCACTTTGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSFCLVPTYGLTFLNIISSSGA*TTTLGW Trigger: CCAGCCCAAAGTGGTGGTCAAAGCTCCAGATGAAGA...AATGATGTTAAGGAAAGTAAGACCGTAAGTAGGAACTAAGCAGAATGATGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCTGGGTACAGTTACAGTCCTTTAGTTCCCATAAATTCTCACATTTACACTCTCTGTGTCTCTATTaGCCTCACTTGTTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGWVQLQSFSSHKFSHLHSLCLY*PHLLSS Trigger: AGAACTCAACAAGTGAGGCAAATAGAGACACAGAGA...GTGTAAATGTGAGAATTTATGGGAACTAAAGGACTGTAACTGTACCCAGCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGTCATAACCATGTATTTAAGATTGAGTTCTACTCAGTTACATGTGGTTGCACCACAAGAATCATTTaGTATTCCCCACTCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSHNHVFKIEFYSVTCGCTTRII*YSPLSP Trigger: GGGAGAGAGTGGGGAATACAAAATGATTCTTGTGGT...GCAACCACATGTAACTGAGTAGAACTCAATCTTAAATACATGGTTATGACTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CAA 90 bp | GACCACCACTTTGGGCTGGCCACAGTACTCCCACTCTTTGAGCACTaGAGGGCTTCTCCTTTGAGTCTGCTTGTAGGCAGACACGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DHHFGLATVLPLFEH*RASPLSLLVGRHGS Trigger: GCTGCCGTGTCTGCCTACAAGCAGACTCAAAGGAGAAGCCCTCAAGTGCTCAAAGAGTGGGAGTACTGTGGCCAGCCCAAAGTGGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CAA 90 bp | TGCTTGCTTCAGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTTGTaGAGTTCTGGGGGAACATCCCAAGGTGGCTCCGGAGGCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLLQFQSLCLYLPHL*SSGGTSQGGSGGPS Trigger: GCTGGGGCCTCCGGAGCCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGAGGCAAATAGAGACACAGAGACTGGAACTGAAGCAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CAA 90 bp | AGATGCTTGCTTCAGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTaGTTGAGTTCTGGGGGAACATCCCAAGGTGGCTCCGGAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RCLLQFQSLCLYLPH*LSSGGTSQGGSGGP Trigger: GGGGCCTCCGGAGCCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGAGGCAAATAGAGACACAGAGACTGGAACTGAAGCAAGCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 72 bp | CCACCACTTTGGGCTGGCCACAGTACTCCCACTCTTTaGGCACTTGAGGGCTTCTCCTTTGAGTCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPLWAGHSTPTL*ALEGFSFESAC Trigger: ACAAGCAGACTCAAAGGAGAAGCCCTCAAGTGCTCAAAGAGTGGGAGTACTGTGGCCAGCCCAAAGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 72 bp | AGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTTGTTaGGTTCTGGGGGAACATCCCAAGGTGGCTCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLCVSICLTC*VLGEHPKVAPE Trigger: CTCCGGAGCCACCTTGGGATGTTCCCCCAGAACTCAACAAGTGAGGCAAATAGAGACACAGAGACTGGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CAA 72 bp | GTACTCCCACTCTTTGAGCACTTGAGGGCTTCTCCTTaGAGTCTGCTTGTAGGCAGACACGGCAGCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLPLFEHLRASP*SLLVGRHGSMR Trigger: TCTCATGCTGCCGTGTCTGCCTACAAGCAGACTCAAAGGAGAAGCCCTCAAGTGCTCAAAGAGTGGGAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS CAA 72 bp | ATGAGGGTGTCTTCATCTGGAGCTTTGACCACCACTTaGGGCTGGCCACAGTACTCCCACTCTTTGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: MRVSSSGALTTT*GWPQYSHSLST Trigger: AGTGCTCAAAGAGTGGGAGTACTGTGGCCAGCCCAAAGTGGTGGTCAAAGCTCCAGATGAAGACACCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 72 bp | CAAGCAACTCCAGCAGCCAAGCTGAGTGTACCAGGATaGACCAAATACTCCATAGTCAAGAACTTGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QATPAAKLSVPG*TKYSIVKNLES Trigger: GCTCTCCAAGTTCTTGACTATGGAGTATTTGGTTCATCCTGGTACACTCAGCTTGGCTGCTGGAGTTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
||
| CDS TCA 72 bp | CCAATTCCCAGGACAGTTCGAGAACCTGGTTCAATCTaGGTACGTCCAGCATCTTGGATTAAACTTACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PIPRTVREPGSI*VRPASWIKLTV Trigger: GACTGTAAGTTTAATCCAAGATGCTGGACGTACTCAGATTGAACCAGGTTCTCGAACTGTCCTGGGAATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS CAA 90 bp | GAACCACAAGAATCATTTTGTATTCCCCACTCTCTCCCAAGATGCTaGCTTCAGTTCCAGTCTCTGTGTCTCTATTTGCCTCACTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: EPQESFCIPHSLPRC*LQFQSLCLYLPHLL Trigger: CAACAAGTGAGGCAAATAGAGACACAGAGACTGGAACTGAAGCAAGCATCTTGGGAGAGAGTGGGGAATACAAAATGATTCTTGTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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| CDS CAA 72 bp | CCCATTTTAAGGTCAGTTCGAACCACAAGAATCATTTaGTATTCCCCACTCTCTCCCAAGATGCTTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PILRSVRTTRII*YSPLSPKMLAS Trigger: TGAAGCAAGCATCTTGGGAGAGAGTGGGGAATACAAAATGATTCTTGTGGTTCGAACTGACCTTAAAATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108021.2 ENSMUST00000108022.8 |
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