RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRZ1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068748

Ensembl transcript IDs: ENSMUST00000090568.7, ENSMUST00000202102.2, ENSMUST00000202579.4

Found 515 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGAAATCATGAGTGAAATTATATTTATAGGAGCTACAAATGGTTaGACGTTCTGGTTAAAAAGTGAAGGTCTGCTGGTGGACCGGAAT +
Preference number: 1 (lower is better)
Translates to: FEIMSEIIFIGATNG*TFWLKSEGLLVDRN
Trigger: ATTCCGGTCCACCAGCAGACCTTCACTTTTTAACCAGAACGTTCAACCATTTGTAGCTCCTATAAATATAATTTCACTCATGATTTCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTTCTGGTTAAAAAGTaGAGGTCTGCTGGTGGACCG +
Preference number: 2 (lower is better)
Translates to: LTFKAHICIACCSLLQETVLVKK*RSAGGP
Trigger: CGGTCCACCAGCAGACCTTCACTTTTTAACCAGAAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTTAGAAAGAGACAATaGATGGATGAGGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFFRKRQ*MDEGCP
Trigger: AGGACATCCCTCATCCATGCATTGTCTCTTTCTAAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
3UTR-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTCCTTTGTTTCTGTTaGTGGATAGGTGCTCATAGC +
Preference number: 2 (lower is better)
Translates to: LTFKAHICIACCSLLQETLLCFC*WIGAHS
Trigger: GCTATGAGCACCTATCCACCAACAGAAACAAAGGAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTAATGGTGTCAATTTaGCAGCAGAATGAGTTACTG +
Preference number: 2 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFLMVSI*QQNELL
Trigger: CAGTAACTCATTCTGCTGCCAAATTGACACCATTAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
3UTR-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACGTTGATGTGCACATaGGAAGTGTCTCCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LTFKAHICIACCSLLQETTLMCT*EVSPLF
Trigger: AAACAAAGGAGACACTTCCCATGTGCACATCAACGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTTTGTTTCTGTTGGTaGATAGGTGCTCATAGCATA +
Preference number: 2 (lower is better)
Translates to: LTFKAHICIACCSLLQETLCFCW*IGAHSI
Trigger: TATGCTATGAGCACCTATCCACCAACAGAAACAAAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTTAGAAAGAGACAATaGATGGATGAGGGATGTCCT +
Preference number: 2 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFRKRQ*MDEGCP
Trigger: AGGACATCCCTCATCCATGCATTGTCTCTTTCTAAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTAATGGTGTCAATTTaGCAGCAGAATGAGTTACTG +
Preference number: 2 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLMVSI*QQNELL
Trigger: CAGTAACTCATTCTGCTGCCAAATTGACACCATTAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTTATCGGGGATGAAGTaGTTTACTTACAATCTACTA +
Preference number: 2 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLSGMK*FTYNLL
Trigger: TAGTAGATTGTAAGTAAACCACTTCATCCCCGATAA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
3UTR-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATATAGGAGCTACAAATaGTTGAACGTTCTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: LTFKAHICIACCSLLQETYRSYK*LNVLVK
Trigger: TTTAACCAGAACGTTCAACCATTTGTAGCTCCTATA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTATCGGGGATGAAGTaGTTTACTTACAATCTACTA +
Preference number: 2 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLSGMK*FTYNLL
Trigger: TAGTAGATTGTAAGTAAACCACTTCATCCCCGATAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR TCA 72 bp AGGAGCTACAAATGGTTGAACGTTCTGGTTAAAAAGTaGAGGTCTGCTGGTGGACCGGAATTCCTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: RSYKWLNVLVKK*RSAGGPEFLSS
Trigger: GGAAGAAAGGAATTCCGGTCCACCAGCAGACCTTCACTTTTTAACCAGAACGTTCAACCATTTGTAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR CCA 72 bp CATTCAAAAAGGCACACGTTGTTAATGGTGTCAATTTaGCAGCAGAATGAGTTACTGTCAGGTCACAAGAAG +
Preference number: 3 (lower is better)
Translates to: HSKRHTLLMVSI*QQNELLSGHKK
Trigger: CTTCTTGTGACCTGACAGTAACTCATTCTGCTGCCAAATTGACACCATTAACAACGTGTGCCTTTTTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGGAAGTGTCTCCTTaGTTTCTGTTGGTGGATAGG +
Preference number: 3 (lower is better)
Translates to: LTFKAHICIACCSLLQETWEVSP*FLLVDR
Trigger: CCTATCCACCAACAGAAACAAAGGAGACACTTCCCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACACAGCACACTGCATaGCAATATACTAACGGTGTA +
Preference number: 3 (lower is better)
Translates to: LTFKAHICIACCSLLQETTQHTA*QYTNGV
Trigger: TACACCGTTAGTATATTGCAATGCAGTGTGCTGTGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCAAAAAGGCACACGTaGTTAATGGTGTCAATTTGG +
Preference number: 3 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSKRHT*LMVSIW
Trigger: CCAAATTGACACCATTAACAACGTGTGCCTTTTTGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
3UTR-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGGAGCTACAAATGGTaGAACGTTCTGGTTAAAAAG +
Preference number: 3 (lower is better)
Translates to: LTFKAHICIACCSLLQETRSYKW*NVLVKK
Trigger: CTTTTTAACCAGAACGTTCAACCATTTGTAGCTCCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR GCA 72 bp CATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTaGTTCAAGAAACATCTGGCTAATAAACCAATTTGC +
Preference number: 3 (lower is better)
Translates to: HLKHTSVLHVAV*FKKHLANKPIC
Trigger: GCAAATTGGTTTATTAGCCAGATGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
3UTR-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCAAAAAGGCACACGTaGTTAATGGTGTCAATTTGG +
Preference number: 3 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSKRHT*LMVSIW
Trigger: CCAAATTGACACCATTAACAACGTGTGCCTTTTTGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR TCA 72 bp ATGAGTGAAATTATATTTATAGGAGCTACAAATGGTTaGACGTTCTGGTTAAAAAGTGAAGGTCTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: MSEIIFIGATNG*TFWLKSEGLLV
Trigger: CACCAGCAGACCTTCACTTTTTAACCAGAACGTTCAACCATTTGTAGCTCCTATAAATATAATTTCACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCACAGGCACAGGAGCTaGACGCACGCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFHRHRS*THARKL
Trigger: GAGCTTCCTCGCGTGCGTTCAGCTCCTGTGCCTGTG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAACAACTGGCCCGACTaGATGGCGCTTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFNNWPD*MALGLG
Trigger: GCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTGGCCCGACTGCATaGCGCTTGGCCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSTGPTA*RLAWAA
Trigger: GGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTGGCCCGACTGCATaGCGCTTGGCCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTGPTA*RLAWAA
Trigger: GGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACACAGGCACAGGAGCTaGACGCACGCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETHRHRS*THARKL
Trigger: GAGCTTCCTCGCGTGCGTTCAGCTCCTGTGCCTGTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGCATGGCGCTTGGCCTaGGCAGCCTTTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFAWRLA*AAFLTK
Trigger: CTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGCAGTGGACAACAACTaGCCCGACTGCATGGCGCTT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFAVDNN*PDCMAL
Trigger: AAGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCACGCCAGCACTGCAGTaGACAACAACTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFTPALQ*TTTGPT
Trigger: AGTCGGGCCAGTTGTTGTCCACTGCAGTGCTGGCGT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCACAGGCACAGGAGCTaGACGCACGCGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHRHRS*THARKL
Trigger: GAGCTTCCTCGCGTGCGTTCAGCTCCTGTGCCTGTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCATCCCTCTCAGCAGCTaGAGTGACTTGCGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFIPLSS*SDLRKG
Trigger: ACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGAT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAACAACTGGCCCGACTaGATGGCGCTTGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCNNWPD*MALGLG
Trigger: GCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGATGGGTTCTCTTCCTaGCTTGTGCTGACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFDGFSS*LVLTRL
Trigger: CAGCCTCGTCAGCACAAGGCAGGAAGAGAACCCATC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGAGCAAGGGCTGTGTTaGAGGGTGTACTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFEQGLC*RVYYFP
Trigger: AGGGAAGTAGTACACCCTTCAACACAGCCCTTGCTC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTAGATCCTGGGGTATaGGGAAGGACAGCACTACCC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFLDPGV*GRTALP
Trigger: GGGTAGTGCTGTCCTTCCTCATACCCCAGGATCTAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCATTCCACGGTGTCTGTaGAGGGAGGGGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFIPRCL*REGMSM
Trigger: CATTGACATCCCCTCCCTGCACAGACACCGTGGAAT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCTATCTGAGGTGCCTTaGCCTGACCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFLSEVP*PDPLSS
Trigger: TGAAGAGAGTGGGTCAGGGCAAGGCACCTCAGATAG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGAGGTTGAGGGGCTaGAGCCTGAAGAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETWRLRG*SLKSHR
Trigger: CCGATGACTCTTCAGGCTCCAGCCCCTCAACCTCCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCGACTGCATGGCGCTTaGCCTGGGCAGCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRLHGA*PGQPFS
Trigger: TGAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGTCCAGAGAGGTGGATaGGTTCTCTTCCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFVQRGG*VLFLPC
Trigger: ACAAGGCAGGAAGAGAACCCATCCACCTCTCTGGAC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCCATTGTATACTGGTTaGGTCGTCTGCGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFPLYTG*VVCEWR
Trigger: CCTCCATTCGCAGACGACTCAACCAGTATACAATGG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCAGGATGGATTCAAATaGCACACCAACACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFQDGFK*HTNTGG
Trigger: TCCCCCAGTGTTGGTGTGTCATTTGAATCCATCCTG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAATCCCTCTCAGCAGCTaGAGTGACTTGCGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETIPLSS*SDLRKG
Trigger: ACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGAT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAAGTCCTTGATGGTGTaGAGCAGGGGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSKSLMV*SRGCWV
Trigger: CACCCAGCATCCCCTGCTGCACACCATCAAGGACTT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGTCATTTCCCGCCAGTaGCTGGTACAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFVISRQ*LVQNCK
Trigger: TTTGCAGTTCTGTACCAGCCACTGGCGGGAAATGAC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGGAGGTTGAGGGGCTaGAGCCTGAAGAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCWRLRG*SLKSHR
Trigger: CCGATGACTCTTCAGGCTCCAGCCCCTCAACCTCCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGCATGGCGCTTGGCCTaGGCAGCCTTTCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCAWRLA*AAFLTK
Trigger: CTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGCAGTGGACAACAACTaGCCCGACTGCATGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCAVDNN*PDCMAL
Trigger: AAGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACGCCAGCACTGCAGTaGACAACAACTGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTPALQ*TTTGPT
Trigger: AGTCGGGCCAGTTGTTGTCCACTGCAGTGCTGGCGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCCGGATTTGGCCATTTaGGGCACTGGAAATGCCTTA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFPDLAI*GTGNAL
Trigger: TAAGGCATTTCCAGTGCCCCAAATGGCCAAATCCGG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGTCTGGAGGATGGAGTaGAAGCCTGTGGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSVWRME*KPVVSL
Trigger: AAGTGACACCACAGGCTTTCACTCCATCCTCCAGAC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTCTGGAGGATGGAGTaGAAGCCTGTGGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVWRME*KPVVSL
Trigger: AAGTGACACCACAGGCTTTCACTCCATCCTCCAGAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGTAGTGTTGAGGGTCTaGTTGTCAAGCAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFVVLRV*LSSNKG
Trigger: CCCTTTGTTGCTTGACAATCAGACCCTCAACACTAC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGCCGAATCACTACTTaGAGCAGCAGGGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETGRITT*SSRGSV
Trigger: AACACTACCCCTGCTGCTTCAAGTAGTGATTCGGCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGAGCAAGGGCTGTGTTaGAGGGTGTACTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETEQGLC*RVYYFP
Trigger: AGGGAAGTAGTACACCCTTCAACACAGCCCTTGCTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGAACTGTTAAGCCTTaGAGTGGAGTGGAGTGCACC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETGTVKP*SGVECT
Trigger: GGTGCACTCCACTCCACTTCAAGGCTTAACAGTTCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTAGATCCTGGGGTATaGGGAAGGACAGCACTACCC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLDPGV*GRTALP
Trigger: GGGTAGTGCTGTCCTTCCTCATACCCCAGGATCTAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTCGACCAGTGTATCGTaGATGAAGACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSTSVS*MKTYCS
Trigger: GGAGCAGTATGTCTTCATTCACGATACACTGGTCGA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCACCAGCTGGGCATTATaGTCCCATATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFTSWAL*SHIILQ
Trigger: CTGGAGAATGATATGGGATCATAATGCCCAGCTGGT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCCGGCCTCATCAAATTaGTCATCTTGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFPASSN*SSWLLG
Trigger: ACCAAGTAGCCAAGATGATCAATTTGATGAGGCCGG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAATTCCACGGTGTCTGTaGAGGGAGGGGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETIPRCL*REGMSM
Trigger: CATTGACATCCCCTCCCTGCACAGACACCGTGGAAT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGGGCTGGAGGAGGCTaGAGTAATGATGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSRAGGG*SNDAVG
Trigger: TCCAACTGCATCATTACTGCAGCCTCCTCCAGCCCT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGGGCTGGAGGAGGCTaGAGTAATGATGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRAGGG*SNDAVG
Trigger: TCCAACTGCATCATTACTGCAGCCTCCTCCAGCCCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTATCTGAGGTGCCTTaGCCTGACCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLSEVP*PDPLSS
Trigger: TGAAGAGAGTGGGTCAGGGCAAGGCACCTCAGATAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCACTCAGGGATGAAATaGCCACCCTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFHSGMK*PPLIFP
Trigger: TGGAAAGATCAAGGGTGGGCATTTCATCCCTGAGTG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAAGTCCTTGATGGTGTaGAGCAGGGGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCKSLMV*SRGCWV
Trigger: CACCCAGCATCCCCTGCTGCACACCATCAAGGACTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGATGGGTTCTCTTCCTaGCTTGTGCTGACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDGFSS*LVLTRL
Trigger: CAGCCTCGTCAGCACAAGGCAGGAAGAGAACCCATC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTCCATCAGGCAAAGCTaGACCATTACTGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSIRQS*TITVQR
Trigger: TCTCTGGACAGTAATGGTGCAGCTTTGCCTGATGGA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCTGTGGAGTTAACCTaGAGAAAGCTCTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSVELT*RKLSRP
Trigger: CGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCTGTGGAGTTAACCTaGAGAAAGCTCTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSVELT*RKLSRP
Trigger: CGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCAAGCAACAAAGGGGTaGCTAGAGGAAAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFQATKG*LEERLH
Trigger: GTGAAGTCTTTCCTCTAGCCACCCCTTTGTTGCTTG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGCTGTGGACTTCAGTaGACCCTGGGCAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSCGLQ*TLGSNV
Trigger: TACATTGCTGCCCAGGGTCCACTGAAGTCCACAGCT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTGCTTCAGGGCTGTaGAGTAGTCACTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSTASGL*SSHSGG
Trigger: TCCTCCAGAGTGACTACTCCACAGCCCTGAAGCAGT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGGCCATTTGGGGCACTaGAAATGCCTTACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSGHLGH*KCLTSS
Trigger: GCTGGAAGTAAGGCATTTCCAGTGCCCCAAATGGCC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGAGGTCTTTCCCATGTaGCCAGAAGGCTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSEVFPM*PEGWCN
Trigger: ATTACACCAGCCTTCTGGTCACATGGGAAAGACCTC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGAGGTCTTTCCCATGTaGCCAGAAGGCTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETEVFPM*PEGWCN
Trigger: ATTACACCAGCCTTCTGGTCACATGGGAAAGACCTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTCTGGAGGATGGAGTaGAAGCCTGTGGTGTCACTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVWRME*KPVVSL
Trigger: AAGTGACACCACAGGCTTTCACTCCATCCTCCAGAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCATTGTATACTGGTTaGGTCGTCTGCGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETPLYTG*VVCEWR
Trigger: CCTCCATTCGCAGACGACTCAACCAGTATACAATGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGCCGAATCACTACTTaGAGCAGCAGGGGTAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGRITT*SSRGSV
Trigger: AACACTACCCCTGCTGCTTCAAGTAGTGATTCGGCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAGGATGGATTCAAATaGCACACCAACACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETQDGFK*HTNTGG
Trigger: TCCCCCAGTGTTGGTGTGTCATTTGAATCCATCCTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACTTGCGGAAGGGTTTaGGAAACCGTATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETTCGRV*ETVCRW
Trigger: CCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGTAGTGGCCTGATGTaGCGCCACATCAGAATACTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSSGLM*RHIRIL
Trigger: CAGTATTCTGATGTGGCGTCACATCAGGCCACTACT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGGAGGACTCAGGCATTaGTATATGGCTAGGATTGAT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFGGLRH*YMARID
Trigger: ATCAATCCTAGCCATATATCAATGCCTGAGTCCTCC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGAACTGTTAAGCCTTaGAGTGGAGTGGAGTGCACC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGTVKP*SGVECT
Trigger: GGTGCACTCCACTCCACTTCAAGGCTTAACAGTTCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGCTTGTTGTCTGGGTaGTTGGAGCTGTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCLLSG*LELSAV
Trigger: CACAGCAGACAGCTCCAATCACCCAGACAACAAGCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCACTCTGGAGGATATTTaGCTGACTCAGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFTLEDI*LTQKLE
Trigger: TTCCAGCTTCTGAGTCAGTCAAATATCCTCCAGAGT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCTCCAGAAGTCCTTaGTGGTGTGCAGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFSRSP*WCAAGD
Trigger: ATCCCCTGCTGCACACCATCAAGGACTTCTGGAGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATTCCACGGTGTCTGTaGAGGGAGGGGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCIPRCL*REGMSM
Trigger: CATTGACATCCCCTCCCTGCACAGACACCGTGGAAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGATCCAGTCTCAGACTaGGTTGTTAGGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETDPVSD*VVRSVE
Trigger: CTCCACAGACCTAACAACGCAGTCTGAGACTGGATC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGTGTGCAGCAGGGGATaGTGGGTGATGATGAATTCA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSVCSRG*WVMMNS
Trigger: TGAATTCATCATCACCCAGCATCCCCTGCTGCACAC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCAAACTTCTCAATCATaGCGTCATAAACGACCCGAG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFQTSQS*RHKRPE
Trigger: CTCGGGTCGTTTATGACGCCATGATTGAGAAGTTTG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTCATTTCCCGCCAGTaGCTGGTACAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVISRQ*LVQNCK
Trigger: TTTGCAGTTCTGTACCAGCCACTGGCGGGAAATGAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTCAGATCCTCTTGTTaGAGATCGGTTAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFFRSSC*RSVSLG
Trigger: GCCAAGACTAACCGATCTCCAACAAGAGGATCTGAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGCCTTCCACATTGTGTaGTGGCAGGTTAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETAFHIV*WQVSSS
Trigger: ACTGGAACTAACCTGCCACCACACAATGTGGAAGGC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGCGTTGTTAGGTCTGTaGAGCCAGGAAACCATACAC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSALLGL*SQETIH
Trigger: GTGTATGGTTTCCTGGCTCCACAGACCTAACAACGC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGCGTTGTTAGGTCTGTaGAGCCAGGAAACCATACAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETALLGL*SQETIH
Trigger: GTGTATGGTTTCCTGGCTCCACAGACCTAACAACGC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCTGTGGAGTTAACCTaGAGAAAGCTCTCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSVELT*RKLSRP
Trigger: CGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTGGTGTCACTTCGGTTaGGAGGTAGGCAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSWCHFG*EVGKGR
Trigger: TCTACCTTTGCCTACCTCCCAACCGAAGTGACACCA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGTGTCACTTCGGTTaGGAGGTAGGCAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETWCHFG*EVGKGR
Trigger: TCTACCTTTGCCTACCTCCCAACCGAAGTGACACCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAAGTGGTCTGGAGGATaGAGTGAAAGCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETKWSGG*SESLWC
Trigger: ACACCACAGGCTTTCACTCCATCCTCCAGACCACTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCTCACCATTGTATACTaGTTGAGTCGTCTGCGAATG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFLTIVY*LSRLRM
Trigger: CATTCGCAGACGACTCAACCAGTATACAATGGTGAG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGGAAGCAGAGGAAAATaGGAGCAGAGGTGCATCATC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSGSRGK*EQRCII
Trigger: GATGATGCACCTCTGCTCCCATTTTCCTCTGCTTCC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGAAGCAGAGGAAAATaGGAGCAGAGGTGCATCATC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETGSRGK*EQRCII
Trigger: GATGATGCACCTCTGCTCCCATTTTCCTCTGCTTCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAACTGTAAGAAACAGTaGGTACGTGGTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSNCKKQ*VRGGSP
Trigger: AGGGCTCCCACCACGTACCCACTGTTTCTTACAGTT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAACTGTAAGAAACAGTaGGTACGTGGTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETNCKKQ*VRGGSP
Trigger: AGGGCTCCCACCACGTACCCACTGTTTCTTACAGTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTGGGAAGATAATTTCTaGAACGTGACTAACCCCCTG +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFWEDNF*NVTNPL
Trigger: CAGGGGGTTAGTCACGTTCCAGAAATTATCTTCCCA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGATGGCAGCACTTGCTaGGGACTTTTGCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDGSTC*GLLLLS
Trigger: GCTTAAGAGCAAAAGTCCCCAGCAAGTGCTGCCATC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGATGGCAGCACTTGCTaGGGACTTTTGCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETDGSTC*GLLLLS
Trigger: GCTTAAGAGCAAAAGTCCCCAGCAAGTGCTGCCATC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGAAGCAACTTGGCTGTaGTCACAGAATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFEATWL*SQNHLC
Trigger: ACAGAGATGATTCTGTGACCACAGCCAAGTTGCTTC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGCTGTGGACTTCAGTaGACCCTGGGCAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSCGLQ*TLGSNV
Trigger: TACATTGCTGCCCAGGGTCCACTGAAGTCCACAGCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTGCTTCAGGGCTGTaGAGTAGTCACTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTASGL*SSHSGG
Trigger: TCCTCCAGAGTGACTACTCCACAGCCCTGAAGCAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGCCATTTGGGGCACTaGAAATGCCTTACTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGHLGH*KCLTSS
Trigger: GCTGGAAGTAAGGCATTTCCAGTGCCCCAAATGGCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTCCAGAGAGGTGGATaGGTTCTCTTCCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVQRGG*VLFLPC
Trigger: ACAAGGCAGGAAGAGAACCCATCCACCTCTCTGGAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTACTGTCCAGAGAGGTaGATGGGTTCTCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCYCPER*MGSLPA
Trigger: GGCAGGAAGAGAACCCATCCACCTCTCTGGACAGTA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGAGGTCTTTCCCATGTaGCCAGAAGGCTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCEVFPM*PEGWCN
Trigger: ATTACACCAGCCTTCTGGTCACATGGGAAAGACCTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTAGTGTTGAGGGTCTaGTTGTCAAGCAACAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVVLRV*LSSNKG
Trigger: CCCTTTGTTGCTTGACAATCAGACCCTCAACACTAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTTGCGGAAGGGTTTaGGAAACCGTATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTCGRV*ETVCRW
Trigger: CCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGCCACATCAGAATACTaGACAAGGCTGGGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSATSEY*TRLGSN
Trigger: GTTAGAACCCAGCCTTGTTCAGTATTCTGATGTGGC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGCCACATCAGAATACTaGACAAGGCTGGGTTCTAAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETATSEY*TRLGSN
Trigger: GTTAGAACCCAGCCTTGTTCAGTATTCTGATGTGGC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGTAGTGGCCTGATGTaGCGCCACATCAGAATACTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSSGLM*RHIRIL
Trigger: CAGTATTCTGATGTGGCGTCACATCAGGCCACTACT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGCAGTGTGTGTAGGTTaGACTGGGAAGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFAVCVG*TGKIIS
Trigger: AGAAATTATCTTCCCAGTTCAACCTACACACACTGC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCAACATCAGAAGCCTaGAAGGAAGGTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSTSEA*KEGCSN
Trigger: GTTGCTGCAACCTTCCTTTCAGGCTTCTGATGTTGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAAAACTCGTCATTGCTaGACAAAGATGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFKTRHC*TKMAAL
Trigger: AAGTGCTGCCATCTTTGTTCAGCAATGACGAGTTTT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTTGGCAGGAGGTTCTaGAAGACGAATGGATCTAAA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFFGRRF*KTNGSK
Trigger: TTTAGATCCATTCGTCTTGCAGAACCTCCTGCCAAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTTCTCAGGGTCAGCTTaGACATTTTCTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFFSGSA*TFSGSE
Trigger: TTCAGAACCAGAAAATGTGCAAGCTGACCCTGAGAA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTAAGGAGGCTGAAGTaGCTTCCACATTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLRRLK*LPHCVV
Trigger: CACCACACAATGTGGAAGGCACTTCAGCCTCCTTAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGATCCAGTCTCAGACTaGGTTGTTAGGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDPVSD*VVRSVE
Trigger: CTCCACAGACCTAACAACGCAGTCTGAGACTGGATC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGATACAGGCGTAGCATaGAAGGCCGAATCACTACTT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDTGVA*KAESLL
Trigger: AAGTAGTGATTCGGCCTTGCATGCTACGCCTGTATC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGATACAGGCGTAGCATaGAAGGCCGAATCACTACTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETDTGVA*KAESLL
Trigger: AAGTAGTGATTCGGCCTTGCATGCTACGCCTGTATC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCCAGATGCTTGAGATaGAGTGTGTGTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETPRCLR*SVCRLN
Trigger: GTTCAACCTACACACACTGCATCTCAAGCATCTGGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTGTGCAGCAGGGGATaGTGGGTGATGATGAATTCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVCSRG*WVMMNS
Trigger: TGAATTCATCATCACCCAGCATCCCCTGCTGCACAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTGTAATACTTGTCAGTaGAGTTTGGCAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFCNTCQ*SLAGGS
Trigger: AGAACCTCCTGCCAAACTCCACTGACAAGTATTACA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTCATTTCCCGCCAGTaGCTGGTACAGAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVISRQ*LVQNCK
Trigger: TTTGCAGTTCTGTACCAGCCACTGGCGGGAAATGAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGTTCGGCATCTTCAGTaGGCATGTCCACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSVRHLQ*ACPLSV
Trigger: AACTGATAGTGGACATGCCCACTGAAGATGCCGAAC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTTCGGCATCTTCAGTaGGCATGTCCACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVRHLQ*ACPLSV
Trigger: AACTGATAGTGGACATGCCCACTGAAGATGCCGAAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGTCGTGGTAGAAACCTaGGGTTCCTTTTTCCTTATT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFVVVET*GSFFLI
Trigger: AATAAGGAAAAAGGAACCCCAGGTTTCTACCACGAC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTCCACATTGTGTGGTaGCAGGTTAGTTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETFHIVW*QVSSSL
Trigger: CAGACTGGAACTAACCTGCCACCACACAATGTGGAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGCCTTCCACATTGTGTaGTGGCAGGTTAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCAFHIV*WQVSSS
Trigger: ACTGGAACTAACCTGCCACCACACAATGTGGAAGGC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGCGTTGTTAGGTCTGTaGAGCCAGGAAACCATACAC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCALLGL*SQETIH
Trigger: GTGTATGGTTTCCTGGCTCCACAGACCTAACAACGC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGGTGTCACTTCGGTTaGGAGGTAGGCAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCWCHFG*EVGKGR
Trigger: TCTACCTTTGCCTACCTCCCAACCGAAGTGACACCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAAGTGGTCTGGAGGATaGAGTGAAAGCCTGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCKWSGG*SESLWC
Trigger: ACACCACAGGCTTTCACTCCATCCTCCAGACCACTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGGAGCCAAATCAAGTaGTCTGGAGGATGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSRSQIK*SGGWSE
Trigger: TTCACTCCATCCTCCAGACCACTTGATTTGGCTCCT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGGAGCCAAATCAAGTaGTCTGGAGGATGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRSQIK*SGGWSE
Trigger: TTCACTCCATCCTCCAGACCACTTGATTTGGCTCCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAAGCAACAAAGGGGTaGCTAGAGGAAAGACTTCAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETQATKG*LEERLH
Trigger: GTGAAGTCTTTCCTCTAGCCACCCCTTTGTTGCTTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCATCACTAGGCACAGATaGGAGAGCAGTTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFITRHR*ESSFKQ
Trigger: TTGCTTAAAACTGCTCTCCCATCTGTGCCTAGTGAT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACAAGACTGCTCTCCTaGGTGTCCGAGTCATTCATT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSTRLLS*VSESFI
Trigger: AATGAATGACTCGGACACCCAGGAGAGCAGTCTTGT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACAAGACTGCTCTCCTaGGTGTCCGAGTCATTCATT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETTRLLS*VSESFI
Trigger: AATGAATGACTCGGACACCCAGGAGAGCAGTCTTGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCATGGCTACTATTACTaGCCTCTGCCTCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSHGYYY*PLPLNC
Trigger: ACAGTTCAGAGGCAGAGGCCAGTAATAGTAGCCATG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCGGATTTGGCCATTTaGGGCACTGGAAATGCCTTA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPDLAI*GTGNAL
Trigger: TAAGGCATTTCCAGTGCCCCAAATGGCCAAATCCGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTCCGATCCTTCAGATaGCACATTGCATTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETFRSFR*HIAFSP
Trigger: TGGGGAAAATGCAATGTGTCATCTGAAGGATCGGAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTCCTTTCCAGTATATaGGGAAAACACCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETFLSSI*GKHLPG
Trigger: TCCAGGCAGGTGTTTTCCTCATATACTGGAAAGGAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGGTTAGTTCCAGTCTaGGAAGGCAAGGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRLVPV*EGKEIP
Trigger: AGGAATTTCCTTGCCTTCTCAGACTGGAACTAACCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGAGGACTCAGGCATTaGTATATGGCTAGGATTGAT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETGGLRH*YMARID
Trigger: ATCAATCCTAGCCATATATCAATGCCTGAGTCCTCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAGCTACGGAAACAGGTaGAGAAATGTTAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSYGNR*RNVKSS
Trigger: AGAACTCTTAACATTTCTTCACCTGTTTCCGTAGCT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCAACATCAGAAGCCTaGAAGGAAGGTTGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSTSEA*KEGCSN
Trigger: GTTGCTGCAACCTTCCTTTCAGGCTTCTGATGTTGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTCTTTTCCATCATTGTaGTTCTGGGGTAGCATACTT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSFPSL*FWGSIL
Trigger: AAGTATGCTACCCCAGAATCACAATGATGGAAAAGA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTGCTCCAATATCATCTaGAATTGGAAAGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFCSNII*NWKDGC
Trigger: ACACCCATCTTTCCAATTTCAGATGATATTGGAGCA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCGACCAGTGTATCGTaGATGAAGACATACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSTSVS*MKTYCS
Trigger: GGAGCAGTATGTCTTCATTCACGATACACTGGTCGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACCAGCTGGGCATTATaGTCCCATATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTSWAL*SHIILQ
Trigger: CTGGAGAATGATATGGGATCATAATGCCCAGCTGGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCGGCCTCATCAAATTaGTCATCTTGGCTACTTGGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPASSN*SSWLLG
Trigger: ACCAAGTAGCCAAGATGATCAATTTGATGAGGCCGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGCTGGTACAGAACTaGAAACTTCTCAATCATGGC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETWLVQN*KLLNHG
Trigger: GCCATGATTGAGAAGTTTGCAGTTCTGTACCAGCCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTAAGGAGGCTGAAGTaGCTTCCACATTGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLRRLK*LPHCVV
Trigger: CACCACACAATGTGGAAGGCACTTCAGCCTCCTTAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCCAGATGCTTGAGATaGAGTGTGTGTAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPRCLR*SVCRLN
Trigger: GTTCAACCTACACACACTGCATCTCAAGCATCTGGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAACAGGAGTAACAAATaGATGCCTCCCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETNRSNK*MPPFWR
Trigger: CCTCCAAAAGGGAGGCATGCATTTGTTACTCCTGTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCACTCAGGGATGAAATaGCCACCCTTGATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHSGMK*PPLIFP
Trigger: TGGAAAGATCAAGGGTGGGCATTTCATCCCTGAGTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCCATCAGGCAAAGCTaGACCATTACTGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSIRQS*TITVQR
Trigger: TCTCTGGACAGTAATGGTGCAGCTTTGCCTGATGGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAAACTTCTCAATCATaGCGTCATAAACGACCCGAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETQTSQS*RHKRPE
Trigger: CTCGGGTCGTTTATGACGCCATGATTGAGAAGTTTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTTCGGCATCTTCAGTaGGCATGTCCACTATCAGTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVRHLQ*ACPLSV
Trigger: AACTGATAGTGGACATGCCCACTGAAGATGCCGAAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTCAGATCCTCTTGTTaGAGATCGGTTAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETFRSSC*RSVSLG
Trigger: GCCAAGACTAACCGATCTCCAACAAGAGGATCTGAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCCACATTGTGTGGTaGCAGGTTAGTTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFHIVW*QVSSSL
Trigger: CAGACTGGAACTAACCTGCCACCACACAATGTGGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGGAGCCAAATCAAGTaGTCTGGAGGATGGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRSQIK*SGGWSE
Trigger: TTCACTCCATCCTCCAGACCACTTGATTTGGCTCCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTCACCATTGTATACTaGTTGAGTCGTCTGCGAATG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLTIVY*LSRLRM
Trigger: CATTCGCAGACGACTCAACCAGTATACAATGGTGAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGGAAGATAATTTCTaGAACGTGACTAACCCCCTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETWEDNF*NVTNPL
Trigger: CAGGGGGTTAGTCACGTTCCAGAAATTATCTTCCCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAATCAGAAGCAAGCGTTaGGAGACCAGTAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETIRSKR*ETSKYL
Trigger: AAGGTACTTACTGGTCTCCCAACGCTTGCTTCTGAT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCATTGTCAAGGAAATaGGCCCACTTCCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETPLSRK*AHFLME
Trigger: TTCCATTAGGAAGTGGGCCCATTTCCTTGACAATGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGAAGCAACTTGGCTGTaGTCACAGAATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETEATWL*SQNHLC
Trigger: ACAGAGATGATTCTGTGACCACAGCCAAGTTGCTTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCCAATACGAGACTCATaGCTACTATTACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSPIRDS*LLLLAS
Trigger: AGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGCAGCAGGGGATGCTaGGTGATGATGAATTCATTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCSRGC*VMMNSL
Trigger: CAATGAATTCATCATCACCCAGCATCCCCTGCTGCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTTTTCCCAGTGTTGTaGATGAACGTGTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVFPVL*MNVFSK
Trigger: CTTGGAAAACACGTTCATTCACAACACTGGGAAAAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTTGAAGACCTTTTCTaGAAGTCCTCCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLEDLF*KSSTEI
Trigger: TATCTCAGTGGAGGACTTTCAGAAAAGGTCTTCAAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCCGATCCTTCAGATaGCACATTGCATTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFRSFR*HIAFSP
Trigger: TGGGGAAAATGCAATGTGTCATCTGAAGGATCGGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGTAATCCATCAACATaGCATACCCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSNPST*HTQTVA
Trigger: TGCAACAGTCTGGGTATGTCATGTTGATGGATTACT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGTAATCCATCAACATaGCATACCCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSNPST*HTQTVA
Trigger: TGCAACAGTCTGGGTATGTCATGTTGATGGATTACT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCCTTTCCAGTATATaGGGAAAACACCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFLSSI*GKHLPG
Trigger: TCCAGGCAGGTGTTTTCCTCATATACTGGAAAGGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACACATTTTCTGGTTCTaGACTACACACTACTTCGTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETHIFWF*TTHYFV
Trigger: CACGAAGTAGTGTGTAGTTCAGAACCAGAAAATGTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCCTTATTTGGTTTGTaGCACTGTCTCTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSLFGL*HCLYQD
Trigger: ATCCTGGTAGAGACAGTGTCACAAACCAAATAAGGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCCTTATTTGGTTTGTaGCACTGTCTCTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSLFGL*HCLYQD
Trigger: ATCCTGGTAGAGACAGTGTCACAAACCAAATAAGGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGGTTAGTTCCAGTCTaGGAAGGCAAGGAAATTCCT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRLVPV*EGKEIP
Trigger: AGGAATTTCCTTGCCTTCTCAGACTGGAACTAACCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGCAGTGTGTGTAGGTTaGACTGGGAAGATAATTTCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETAVCVG*TGKIIS
Trigger: AGAAATTATCTTCCCAGTTCAACCTACACACACTGC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAAAACTCGTCATTGCTaGACAAAGATGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETKTRHC*TKMAAL
Trigger: AAGTGCTGCCATCTTTGTTCAGCAATGACGAGTTTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCTATAGGGCAAGCATaGCATACACTTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSIGQA*HTLIHR
Trigger: CCTGTGAATAAGTGTATGTCATGCTTGCCCTATAGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCTATAGGGCAAGCATaGCATACACTTATTCACAGG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSIGQA*HTLIHR
Trigger: CCTGTGAATAAGTGTATGTCATGCTTGCCCTATAGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCTGGATCTTCCTTTCTaGGAGCCCTTCTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLDLPF*EPFFNF
Trigger: AAAGTTAAAGAAGGGCTCTCAGAAAGGAAGATCCAG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTCTGGAGGATATTTaGCTGACTCAGAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTLEDI*LTQKLE
Trigger: TTCCAGCTTCTGAGTCAGTCAAATATCCTCCAGAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCCTCTGCCATGTTTTaGCCATCTGGAATCATAACC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSSAMF*PSGIIT
Trigger: GGTTATGATTCCAGATGGTCAAAACATGGCAGAGGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTTCAGATGACACATTaGATTTTCCCCAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLQMTH*IFPSGK
Trigger: CTTTCCACTGGGGAAAATGCAATGTGTCATCTGAAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGATCTAAAGCAGCCTaGTTTCCAAAACGACTAACA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETGSKAA*FPKRLT
Trigger: TGTTAGTCGTTTTGGAAAGCAGGCTGCTTTAGATCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTCTCAGGGTCAGCTTaGACATTTTCTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETFSGSA*TFSGSE
Trigger: TTCAGAACCAGAAAATGTGCAAGCTGACCCTGAGAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGGCTGGTACAGAACTaGAAACTTCTCAATCATGGC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCWLVQN*KLLNHG
Trigger: GCCATGATTGAGAAGTTTGCAGTTCTGTACCAGCCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCCCGAAGAGTATGCATaGATAACAACATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSPEEYA*ITTSLL
Trigger: CAGAAGTGATGTTGTTATGCATGCATACTCTTCGGG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCCGAAGAGTATGCATaGATAACAACATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETPEEYA*ITTSLL
Trigger: CAGAAGTGATGTTGTTATGCATGCATACTCTTCGGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACCATGCAGAGGCATTaGAGAACTGTAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSTMQRH*RTVRNS
Trigger: ACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACCATGCAGAGGCATTaGAGAACTGTAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETTMQRH*RTVRNS
Trigger: ACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAACAGGAGTAACAAATaGATGCCTCCCTTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCNRSNK*MPPFWR
Trigger: CCTCCAAAAGGGAGGCATGCATTTGTTACTCCTGTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTATGACTTCCACATTATaGTCCCAGATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSMTSTL*SQIILQ
Trigger: CTGGAGAATGATCTGGGAGCATAATGTGGAAGTCAT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTTGCATTTTCCCCAGTaGAAAGTTATCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLHFPQ*KVILLA
Trigger: GGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTGCATTTTCCCCAGTaGAAAGTTATCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLHFPQ*KVILLA
Trigger: GGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCTGCTTCCTCAAAACTaGAAAATCTGTCCGCATCAA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLLPQN*KICPHQ
Trigger: TTGATGCGGACAGATTTTCCAGTTTTGAGGAAGCAG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTGCTTCCTCAAAACTaGAAAATCTGTCCGCATCAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLLPQN*KICPHQ
Trigger: TTGATGCGGACAGATTTTCCAGTTTTGAGGAAGCAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGTAATACTTGTCAGTaGAGTTTGGCAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETCNTCQ*SLAGGS
Trigger: AGAACCTCCTGCCAAACTCCACTGACAAGTATTACA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCAAAATACAGCCAGCTaGCTTTCAGAGATGCTAACT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSQNTAS*LSEMLT
Trigger: AGTTAGCATCTCTGAAAGCCAGCTGGCTGTATTTTG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAAAATACAGCCAGCTaGCTTTCAGAGATGCTAACT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETQNTAS*LSEMLT
Trigger: AGTTAGCATCTCTGAAAGCCAGCTGGCTGTATTTTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCTACACACTACTTCGTaGATCTCTTCCTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLHTTS*ISSFPV
Trigger: TACTGGAAAGGAAGAGATCCACGAAGTAGTGTGTAG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTACACACTACTTCGTaGATCTCTTCCTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLHTTS*ISSFPV
Trigger: TACTGGAAAGGAAGAGATCCACGAAGTAGTGTGTAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCAAACTTCTCAATCATaGCGTCATAAACGACCCGAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCQTSQS*RHKRPE
Trigger: CTCGGGTCGTTTATGACGCCATGATTGAGAAGTTTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCATGTCCACTATCAGTTaGTCACTGTACTTTCCATAT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFMSTIS*SLYFPY
Trigger: ATATGGAAAGTACAGTGACCAACTGATAGTGGACAT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTCGTGGTAGAAACCTaGGGTTCCTTTTTCCTTATT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVVVET*GSFFLI
Trigger: AATAAGGAAAAAGGAACCCCAGGTTTCTACCACGAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCAGATCCTCTTGTTaGAGATCGGTTAGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFRSSC*RSVSLG
Trigger: GCCAAGACTAACCGATCTCCAACAAGAGGATCTGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAATCACTAGGCACAGATaGGAGAGCAGTTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETITRHR*ESSFKQ
Trigger: TTGCTTAAAACTGCTCTCCCATCTGTGCCTAGTGAT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATCAGAAGCAAGCGTTaGGAGACCAGTAAGTACCTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCIRSKR*ETSKYL
Trigger: AAGGTACTTACTGGTCTCCCAACGCTTGCTTCTGAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCCCTAATGGAACAGAATaGTCAGTAGATGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFPNGTE*SVDEST
Trigger: TGTACTTTCATCTACTGACCATTCTGTTCCATTAGG...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCATTGTCAAGGAAATaGGCCCACTTCCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPLSRK*AHFLME
Trigger: TTCCATTAGGAAGTGGGCCCATTTCCTTGACAATGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAAGGAAGAAGCAACTTaGCTGTGGTCACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSKEEAT*LWSQNH
Trigger: ATGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAAGGAAGAAGCAACTTaGCTGTGGTCACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETKEEAT*LWSQNH
Trigger: ATGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACAGCACTACCCATTTaGATGTCACTGTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETTALPI*MSLSSF
Trigger: AAAAGAGGACAGTGACATCCAAATGGGTAGTGCTGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCATGTTTTGACCATCTaGAATCATAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSHVLTI*NHNHQL
Trigger: CAGCTGGTGGTTATGATTCCAGATGGTCAAAACATG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGGGCTCATCTTTATTTaGCCAGTAGACAAACTCATC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSGLIFI*PVDKLI
Trigger: GATGAGTTTGTCTACTGGCCAAATAAAGATGAGCCC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCAATACGAGACTCATaGCTACTATTACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPIRDS*LLLLAS
Trigger: TGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTTTTCCCAGTGTTGTaGATGAACGTGTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVFPVL*MNVFSK
Trigger: CTTGGAAAACACGTTCATTCACAACACTGGGAAAAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTTGAAGACCTTTTCTaGAAGTCCTCCACTGAGATA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLEDLF*KSSTEI
Trigger: TATCTCAGTGGAGGACTTTCAGAAAAGGTCTTCAAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAGACTGTTGCATTGTaGGAACTTCACAAAATACAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETQTVAL*ELHKIQ
Trigger: CTGTATTTTGTGAAGTTCTCACAATGCAACAGTCTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGTAATCCATCAACATaGCATACCCAGACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSNPST*HTQTVA
Trigger: TGCAACAGTCTGGGTATGTCATGTTGATGGATTACT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCACATTTTCTGGTTCTaGACTACACACTACTTCGTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHIFWF*TTHYFV
Trigger: CACGAAGTAGTGTGTAGTTCAGAACCAGAAAATGTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCCTTATTTGGTTTGTaGCACTGTCTCTACCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSLFGL*HCLYQD
Trigger: ATCCTGGTAGAGACAGTGTCACAAACCAAATAAGGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGCTACGGAAACAGGTaGAGAAATGTTAAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSYGNR*RNVKSS
Trigger: AGAACTCTTAACATTTCTTCACCTGTTTCCGTAGCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGAATGGTCAGTAGATaGAAGTACATCAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRMVSR*KYIRSK
Trigger: CTTGCTTCTGATGTACTTTCATCTACTGACCATTCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCTTTTCCATCATTGTaGTTCTGGGGTAGCATACTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETSFPSL*FWGSIL
Trigger: AAGTATGCTACCCCAGAATCACAATGATGGAAAAGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGAACACTCTTTTGGTTaGCTAGGAAGCTCCCATATT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCEHSFG*LGSSHI
Trigger: AATATGGGAGCTTCCTAGTCAACCAAAAGAGTGTTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTGGATCTTCCTTTCTaGGAGCCCTTCTTTAACTTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLDLPF*EPFFNF
Trigger: AAAGTTAAAGAAGGGCTCTCAGAAAGGAAGATCCAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTTCAGATGACACATTaGATTTTCCCCAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLQMTH*IFPSGK
Trigger: CTTTCCACTGGGGAAAATGCAATGTGTCATCTGAAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGATCTAAAGCAGCCTaGTTTCCAAAACGACTAACA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGSKAA*FPKRLT
Trigger: TGTTAGTCGTTTTGGAAAGCAGGCTGCTTTAGATCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTATGAGGAAAACACCTaGCTGGAAAACTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSYEENT*LENLYC
Trigger: ACAGTACAAGTTTTCCAGGCAGGTGTTTTCCTCATA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATATGAGGAAAACACCTaGCTGGAAAACTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETYEENT*LENLYC
Trigger: ACAGTACAAGTTTTCCAGGCAGGTGTTTTCCTCATA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCTCAGGGTCAGCTTaGACATTTTCTGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFSGSA*TFSGSE
Trigger: TTCAGAACCAGAAAATGTGCAAGCTGACCCTGAGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGCTTTTAGAAGGGTATaGCATGTCACTGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSAFRRV*HVTERR
Trigger: TCTTCTTTCAGTGACATGGCATACCCTTCTAAAAGC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR GCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGCTTTTAGAAGGGTATaGCATGTCACTGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETAFRRV*HVTERR
Trigger: TCTTCTTTCAGTGACATGGCATACCCTTCTAAAAGC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATGACTTCCACATTATaGTCCCAGATCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCMTSTL*SQIILQ
Trigger: CTGGAGAATGATCTGGGAGCATAATGTGGAAGTCAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTGCATTTTCCCCAGTaGAAAGTTATCTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLHFPQ*KVILLA
Trigger: GGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTGCTTCCTCAAAACTaGAAAATCTGTCCGCATCAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLLPQN*KICPHQ
Trigger: TTGATGCGGACAGATTTTCCAGTTTTGAGGAAGCAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGTAATACTTGTCAGTaGAGTTTGGCAGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCNTCQ*SLAGGS
Trigger: AGAACCTCCTGCCAAACTCCACTGACAAGTATTACA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCAAAATACAGCCAGCTaGCTTTCAGAGATGCTAACT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCQNTAS*LSEMLT
Trigger: AGTTAGCATCTCTGAAAGCCAGCTGGCTGTATTTTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGGAAAACACCTGCCTaGAAAACTTGTACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSRKTPA*KTCTVV
Trigger: AACAACAGTACAAGTTTTCCAGGCAGGTGTTTTCCT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGGAAAACACCTGCCTaGAAAACTTGTACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRKTPA*KTCTVV
Trigger: AACAACAGTACAAGTTTTCCAGGCAGGTGTTTTCCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTACACACTACTTCGTaGATCTCTTCCTTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLHTTS*ISSFPV
Trigger: TACTGGAAAGGAAGAGATCCACGAAGTAGTGTGTAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTCGTGGTAGAAACCTaGGGTTCCTTTTTCCTTATT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVVVET*GSFFLI
Trigger: AATAAGGAAAAAGGAACCCCAGGTTTCTACCACGAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAGACAAGTTCATCTGTaGGAAGATAAAGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFRQVHL*EDKESF
Trigger: AAAACTCTCTTTATCTTCCCACAGATGAACTTGTCT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACATAGGAAGACAGGATaGATTCAAATGACACACCAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETHRKTG*IQMTHQ
Trigger: TTGGTGTGTCATTTGAATCCATCCTGTCTTCCTATG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGTGTGTAGGTTGAACTaGGAAGATAATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETVCRLN*EDNFWN
Trigger: GTTCCAGAAATTATCTTCCCAGTTCAACCTACACAC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACAGCACTACCCATTTaGATGTCACTGTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTALPI*MSLSSF
Trigger: AAAAGAGGACAGTGACATCCAAATGGGTAGTGCTGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCAGTAGGCCAGTACTaGTCACATTTTCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSVGQY*SHFLLP
Trigger: AGGAAGAAGAAAATGTGACCAGTACTGGCCTACTGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCATGTTTTGACCATCTaGAATCATAACCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHVLTI*NHNHQL
Trigger: CAGCTGGTGGTTATGATTCCAGATGGTCAAAACATG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGGCTCATCTTTATTTaGCCAGTAGACAAACTCATC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGLIFI*PVDKLI
Trigger: GATGAGTTTGTCTACTGGCCAAATAAAGATGAGCCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCAGACTGTTGCATTGTaGGAACTTCACAAAATACAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCQTVAL*ELHKIQ
Trigger: CTGTATTTTGTGAAGTTCTCACAATGCAACAGTCTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCATATTCTTCCTCCTTaGTTATTTCTTCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSHILPP*LFLQSQ
Trigger: TTGGGACTGAAGAAATAATCAAGGAGGAAGAATATG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACATATTCTTCCTCCTTaGTTATTTCTTCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETHILPP*LFLQSQ
Trigger: TTGGGACTGAAGAAATAATCAAGGAGGAAGAATATG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGAATGGTCAGTAGATaGAAGTACATCAGAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRMVSR*KYIRSK
Trigger: CTTGCTTCTGATGTACTTTCATCTACTGACCATTCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGCTCCAATATCATCTaGAATTGGAAAGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCSNII*NWKDGC
Trigger: ACACCCATCTTTCCAATTTCAGATGATATTGGAGCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGAAGCCAAATATGTTaGCGGTTCCTTCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRSQIC*RFLHVE
Trigger: TTCAACATGAAGGAACCGTCAACATATTTGGCTTCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTATGAGGAAAACACCTaGCTGGAAAACTTGTACTGT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCYEENT*LENLYC
Trigger: ACAGTACAAGTTTTCCAGGCAGGTGTTTTCCTCATA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGGAAAACACCTGCCTaGAAAACTTGTACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRKTPA*KTCTVV
Trigger: AACAACAGTACAAGTTTTCCAGGCAGGTGTTTTCCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAATGTCCACTATCAGTTaGTCACTGTACTTTCCATAT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETMSTIS*SLYFPY
Trigger: ATATGGAAAGTACAGTGACCAACTGATAGTGGACAT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCATAGGAAGACAGGATaGATTCAAATGACACACCAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHRKTG*IQMTHQ
Trigger: TTGGTGTGTCATTTGAATCCATCCTGTCTTCCTATG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGTGTGTAGGTTGAACTaGGAAGATAATTTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCVCRLN*EDNFWN
Trigger: GTTCCAGAAATTATCTTCCCAGTTCAACCTACACAC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCTAATGGAACAGAATaGTCAGTAGATGAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETPNGTE*SVDEST
Trigger: TGTACTTTCATCTACTGACCATTCTGTTCCATTAGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGCTTTCACAATTTATaGGCTCATCTTTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSFHNL*AHLYLA
Trigger: GGCCAAATAAAGATGAGCCCATAAATTGTGAAAGCT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCATGGCTACTATTACTaGCCTCATTGTATACTGGTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHGYYY*PHCILV
Trigger: AACCAGTATACAATGAGGCCAGTAATAGTAGCCATG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCATATTCTTCCTCCTTaGTTATTTCTTCAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCHILPP*LFLQSQ
Trigger: TTGGGACTGAAGAAATAATCAAGGAGGAAGAATATG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR TCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCTCAAATTCTTCAGTaGACCCATTACTTGCATGTA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSQILQ*THYLHV
Trigger: TACATGCAAGTAATGGGTTCACTGAAGAATTTGAGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR GCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCTTTTTCTAGTTGGTaGATAAGGGTTGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSFSSW*IRVVRA
Trigger: TGCTCTTACAACCCTTATGCACCAACTAGAAAAAGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAATAGGAGACTGCTTTaGGCTATTACATATTGGATA +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETNRRLL*AITYWI
Trigger: TATCCAATATGTAATAGCCCAAAGCAGTCTCCTATT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATGTCCACTATCAGTTaGTCACTGTACTTTCCATAT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCMSTIS*SLYFPY
Trigger: ATATGGAAAGTACAGTGACCAACTGATAGTGGACAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGACAAGTTCATCTGTaGGAAGATAAAGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETRQVHL*EDKESF
Trigger: AAAACTCTCTTTATCTTCCCACAGATGAACTTGTCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACTTTGTACTCTGTTATaGGAACCGTATTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: LTFKAHICIACCSLLQETLCTLL*EPYLRI
Trigger: AATCCTTAAATACGGTTCCCATAACAGAGTACAAAG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGCTTTCACAATTTATaGGCTCATCTTTATTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSFHNL*AHLYLA
Trigger: GGCCAAATAAAGATGAGCCCATAAATTGTGAAAGCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR CAA 72 bp CACTCTACTTCAGGTGAATACTGCAGTTGTAAAATGTaGAATATTATCGGGGATGAAGTGGTTTACTTACAA +
Preference number: 4 (lower is better)
Translates to: HSTSGEYCSCKM*NIIGDEVVYLQ
Trigger: TTGTAAGTAAACCACTTCATCCCCGATAATATTCAACATTTTACAACTGCAGTATTCACCTGAAGTAGAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
3UTR CAA 72 bp GACAAATACTGTAACAAACACGAAGTAGAATGTATTTaGCTGGTTTATACTGCCCTCTTTAGGCAACATAAA +
Preference number: 4 (lower is better)
Translates to: DKYCNKHEVECI*LVYTALFRQHK
Trigger: TTTATGTTGCCTAAAGAGGGCAGTATAAACCAGCAAAATACATTCTACTTCGTGTTTGTTACAGTATTTGTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAATAGGAGACTGCTTTaGGCTATTACATATTGGATA +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCNRRLL*AITYWI
Trigger: TATCCAATATGTAATAGCCCAAAGCAGTCTCCTATT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAGACAAGTTCATCTGTaGGAAGATAAAGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCRQVHL*EDKESF
Trigger: AAAACTCTCTTTATCTTCCCACAGATGAACTTGTCT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCTTTGTACTCTGTTATaGGAACCGTATTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLCTLL*EPYLRI
Trigger: AATCCTTAAATACGGTTCCCATAACAGAGTACAAAG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CCA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATCTGCAACGTGCTTTaGAAAATGCTTTATTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCICNVL*KMLYWN
Trigger: ATTCCAATAAAGCATTTTCCAAAGCACGTTGCAGAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 90 bp GCACTGCAGTGGACAACAACTGGCCCGACTGCATGGCGCTTGGCCTaGGCAGCCTTTCTCACAAAGGCCAGCACGGGCAGGGAGTACTCG +
Preference number: 5 (lower is better)
Translates to: ALQWTTTGPTAWRLA*AAFLTKASTGREYS
Trigger: CGAGTACTCCCTGCCCGTGCTGGCCTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 90 bp CACCAGCAGAGAAGCATGCAAAGACAGCTCATCCCTCTCAGCAGCTaGAGTGACTTGCGGAAGGGTTTGAGAAACCGTATGCAGATGGCG +
Preference number: 5 (lower is better)
Translates to: HQQRSMQRQLIPLSS*SDLRKGLRNRMQMA
Trigger: CGCCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGATGAGCTGTCTTTGCATGCTTCTCTGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 90 bp GAGTTAACCTGGAGAAAGCTCTCTCGGCCGGATCCAGTCTCAGACTaGGTTGTTAGGTCTGTGGAGCCAGGAAACCATACACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: ELTWRKLSRPDPVSD*VVRSVEPGNHTLPS
Trigger: TGAAGGGAGTGTATGGTTTCCTGGCTCCACAGACCTAACAACGCAGTCTGAGACTGGATCCGGCCGAGAGAGCTTTCTCCAGGTTAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 90 bp CTGGGTTCTAACAGCAAATCACCCCTAGCCACCAGCAGAGAAGCATaGAAAGACAGCTCATCCCTCTCAGCAGCTGAAGTGACTTGCGGA +
Preference number: 5 (lower is better)
Translates to: LGSNSKSPLATSREA*KDSSSLSAAEVTCG
Trigger: TCCGCAAGTCACTTCAGCTGCTGAGAGGGATGAGCTGTCTTTGCATGCTTCTCTGCTGGTGGCTAGGGGTGATTTGCTGTTAGAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 90 bp CTACTATTACTGGCCTCTGCCTCTGAACTGTTGGATACTCCTGAGTaGCCACTAGTAACAGATGGTGTGGAGGACCGTGGAGATCCCGGA +
Preference number: 5 (lower is better)
Translates to: LLLLASASELLDTPE*PLVTDGVEDRGDPG
Trigger: TCCGGGATCTCCACGGTCCTCCACACCATCTGTTACTAGTGGGCACTCAGGAGTATCCAACAGTTCAGAGGCAGAGGCCAGTAATAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS TCA 90 bp TGGGAGCAGAGGTGCATCATCATAGGAAGACAGGATGGATTCAAATaGCACACCAACACTGGGGGATACAGGCGTAGCATGCAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: WEQRCIIIGRQDGFK*HTNTGGYRRSMQGR
Trigger: TCGGCCTTGCATGCTACGCCTGTATCCCCCAGTGTTGGTGTGTCATTTGAATCCATCCTGTCTTCCTATGATGATGCACCTCTGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp CCCCACTCAGGGATGAAATGCCCACCCTTGATCTTTCCACAGGGATaGTGGACGATGTTCTGTTCTTCTCCCTGTTACACTGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PHSGMKCPPLIFPQG*WTMFCSSPCYTASG
Trigger: CCCTGAAGCAGTGTAACAGGGAGAAGAACAGAACATCGTCCATCATCCCTGTGGAAAGATCAAGGGTGGGCATTTCATCCCTGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 90 bp CATCGACAGAACCATGCAGAGGCATTGCAGAACTGTAAGAAACAGTaGGTACGTGGTGGGAGCCCTCAACGGTATAAGAAGGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: HRQNHAEALQNCKKQ*VRGGSPQRYKKVQA
Trigger: GGCCTGAACCTTCTTATACCGTTGAGGGCTCCCACCACGTACCCACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTTCTGTCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp GCAGAGAAGCATGCAAAGACAGCTCATCCCTCTCAGCAGCTGAAGTaGCTTGCGGAAGGGTTTGAGAAACCGTATGCAGATGGCGAAACA +
Preference number: 5 (lower is better)
Translates to: AEKHAKTAHPSQQLK*LAEGFEKPYADGET
Trigger: TGTTTCGCCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGATGAGCTGTCTTTGCATGCTTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 90 bp CTCATGCTTGGCTTGGTCATTTCCCGCCAGTGGCTGGTACAGAACTaGAAACTTCTCAATCATGGCGTCATAAACGACCCGAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LMLGLVISRQWLVQN*KLLNHGVINDPRSF
Trigger: GAAAGACCTCGGGTCGTTTATGACGCCATGATTGAGAAGTTTGCAGTTCTGTACCAGCCACTGGCGGGAAATGACCAAGCCAAGCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 90 bp ATGGATTCAAATGACACACCAACACTGGGGGATACAGGCGTAGCATaGAAGGCCGAATCACTACTTGAAGCAGCAGGGGTAGTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: MDSNDTPTLGDTGVA*KAESLLEAAGVVLR
Trigger: CCTCAACACTACCCCTGCTGCTTCAAGTAGTGATTCGGCCTTGCATGCTACGCCTGTATCCCCCAGTGTTGGTGTGTCATTTGAATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp AGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAAATCAAGTaGTCTGGAGGATGGAGTGAAAGCCTGTGGTGTCACTTCGGTTGG +
Preference number: 5 (lower is better)
Translates to: SRLRMEDVDSRSQIK*SGGWSESLWCHFGW
Trigger: CCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTTGATTTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 90 bp ATTTCCATCAGGCAAAGCTGCACCATTACTGTCCAGAGAGGTGGATaGGTTCTCTTCCTGCCTTGTGCTGACGAGGCTGAGGACTACTTT +
Preference number: 5 (lower is better)
Translates to: ISIRQSCTITVQRGG*VLFLPCADEAEDYF
Trigger: AAAGTAGTCCTCAGCCTCGTCAGCACAAGGCAGGAAGAGAACCCATCCACCTCTCTGGACAGTAATGGTGCAGCTTTGCCTGATGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 90 bp CCATCTTCACCACCTCCCACTAAATCGGCATCAGATCTGGCGCTCTaGGTCAGCTTAGAAGTAGCTGTAGAAGGAAGAAGCAACTTGGCT +
Preference number: 5 (lower is better)
Translates to: PSSPPPTKSASDLAL*VSLEVAVEGRSNLA
Trigger: AGCCAAGTTGCTTCTTCCTTCTACAGCTACTTCTAAGCTGACTCAGAGCGCCAGATCTGATGCCGATTTAGTGGGAGGTGGTGAAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp AAGTGGTCTGGAGGATGGAGTGAAAGCCTGTGGTGTCACTTCGGTTaGGAGGTAGGCAAAGGTAGAATAATGTGGCATTCCCATGTCTGT +
Preference number: 5 (lower is better)
Translates to: KWSGGWSESLWCHFG*EVGKGRIMWHSHVC
Trigger: ACAGACATGGGAATGCCACATTATTCTACCTTTGCCTACCTCCCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 90 bp AGTAGGAGCCAAATCAAGTGGTCTGGAGGATGGAGTGAAAGCCTGTaGTGTCACTTCGGTTGGGAGGTAGGCAAAGGTAGAATAATGTGG +
Preference number: 5 (lower is better)
Translates to: SRSQIKWSGGWSESL*CHFGWEVGKGRIMW
Trigger: CCACATTATTCTACCTTTGCCTACCTCCCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTTGATTTGGCTCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 90 bp ATGGAGGATGTTGATAGTAGGAGCCAAATCAAGTGGTCTGGAGGATaGAGTGAAAGCCTGTGGTGTCACTTCGGTTGGGAGGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: MEDVDSRSQIKWSGG*SESLWCHFGWEVGK
Trigger: TTTGCCTACCTCCCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTTGATTTGGCTCCTACTATCAACATCCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS TCA 90 bp AAGGCCGAATCACTACTTGAAGCAGCAGGGGTAGTGTTGAGGGTCTaGTTGTCAAGCAACAAAGGGGTGGCTAGAGGAAAGACTTCACTA +
Preference number: 5 (lower is better)
Translates to: KAESLLEAAGVVLRV*LSSNKGVARGKTSL
Trigger: TAGTGAAGTCTTTCCTCTAGCCACCCCTTTGTTGCTTGACAATCAGACCCTCAACACTACCCCTGCTGCTTCAAGTAGTGATTCGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp GACAGCTCATCCCTCTCAGCAGCTGAAGTGACTTGCGGAAGGGTTTaGGAAACCGTATGCAGATGGCGAAACATTTCACTACTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: DSSSLSAAEVTCGRV*ETVCRWRNISLLKE
Trigger: TTCCTTCAGTAGTGAAATGTTTCGCCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGATGAGCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp TCCTGCCTTGTGCTGACGAGGCTGAGGACTACTTTGTACAGAAACTaGTACTGCTCAATGTCAGTGAAGACTCCCGGCCTCATCAAATTG +
Preference number: 5 (lower is better)
Translates to: SCLVLTRLRTTLYRN*YCSMSVKTPGLIKL
Trigger: CAATTTGATGAGGCCGGGAGTCTTCACTGACATTGAGCAGTATCAGTTTCTGTACAAAGTAGTCCTCAGCCTCGTCAGCACAAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 90 bp GTTGTCTCCCTCGATTCATCAATTTGTATGTCTGTGGAGTTAACCTaGAGAAAGCTCTCTCGGCCGGATCCAGTCTCAGACTGCGTTGTT +
Preference number: 5 (lower is better)
Translates to: VVSLDSSICMSVELT*RKLSRPDPVSDCVV
Trigger: AACAACGCAGTCTGAGACTGGATCCGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGACATACAAATTGATGAATCGAGGGAGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 90 bp TTCTTCTCAGACTCCAACCCCTCAGCTAGACCAATACGAGACTCATaGCTACTATTACTGGCCTCTGCCTCTGAACTGTTGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: FFSDSNPSARPIRDS*LLLLASASELLDTP
Trigger: AGGAGTATCCAACAGTTCAGAGGCAGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGTCTAGCTGAGGGGTTGGAGTCTGAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS CCA 90 bp CCAACCCCTCAGCTAGACCAATACGAGACTCATGGCTACTATTACTaGCCTCATTGTATACTGGTTGAGTCGTCTGCGAATGGAGGATGT +
Preference number: 5 (lower is better)
Translates to: PTPQLDQYETHGYYY*PHCILVESSANGGC
Trigger: ACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGTCTAGCTGAGGGGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCCGACTGCATGGCGCTaGGCCTGGGCAGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSPTAWR*AWAAFL
Trigger: GAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS TCA 90 bp ACTTCTCAATCATGGCGTCATAAACGACCCGAGGTCTTTCCCATGTaGCCAGAAGGCTGGTGTAATTCTCAGGGTCAGCTTGCACATTTT +
Preference number: 5 (lower is better)
Translates to: TSQSWRHKRPEVFPM*PEGWCNSQGQLAHF
Trigger: AAAATGTGCAAGCTGACCCTGAGAATTACACCAGCCTTCTGGTCACATGGGAAAGACCTCGGGTCGTTTATGACGCCATGATTGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 90 bp AAATCTGTGGACGTCTCATTATCATTAAGGCTATCTGAGGTGCCTTaGCCTGACCCACTCTCTTCATCACTTGTCAAAACTGCCCACGCT +
Preference number: 5 (lower is better)
Translates to: KSVDVSLSLRLSEVP*PDPLSSSLVKTAHA
Trigger: AGCGTGGGCAGTTTTGACAAGTGATGAAGAGAGTGGGTCAGGGCAAGGCACCTCAGATAGCCTTAATGATAATGAGACGTCCACAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp TCATACGTGATAGCCTCGGGCATGTCTGAAGAAGTTATGTATCCATaGGATAGATTATCTGAGGAAAAGGGGACAGTGGAGGTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SYVIASGMSEEVMYP*DRLSEEKGTVEVEG
Trigger: CCCCTCAACCTCCACTGTCCCCTTTTCCTCAGATAATCTATCCCATGGATACATAACTTCTTCAGACATGCCCGAGGCTATCACGTATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCGACTGCATGGCGCTaGGCCTGGGCAGCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPTAWR*AWAAFL
Trigger: GAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGGTACCTCCGTTTCCTaGCTGAGTATGGCCTCGACC +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFGTSVS*LSMAST
Trigger: GGTCGAGGCCATACTCAGCAAGGAAACGGAGGTACC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS TCA 90 bp GAAGGGTTTGAGAAACCGTATGCAGATGGCGAAACATTTCACTACTaGAGGAAGCAGAGGAAAATGGGAGCAGAGGTGCATCATCATAGG +
Preference number: 5 (lower is better)
Translates to: EGFEKPYADGETFHY*RKQRKMGAEVHHHR
Trigger: CCTATGATGATGCACCTCTGCTCCCATTTTCCTCTGCTTCCTTCAGTAGTGAAATGTTTCGCCATCTGCATACGGTTTCTCAAACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp ACAGCACTACCCATTTGGATGTCACTGTCCTCTTTTCCATCATTGTaGTTCTGGGGTAGCATACTTGGTGGTGGTGACTTATCCACCCTA +
Preference number: 5 (lower is better)
Translates to: TALPIWMSLSSFPSL*FWGSILGGGDLSTL
Trigger: TAGGGTGGATAAGTCACCACCACCAAGTATGCTACCCCAGAATCACAATGATGGAAAAGAGGACAGTGACATCCAAATGGGTAGTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp TCTTCATCACTTGTCAAAACTGCCCACGCTTTAGATCCTGGGGTATaGGGAAGGACAGCACTACCCATTTGGATGTCACTGTCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SSSLVKTAHALDPGV*GRTALPIWMSLSSF
Trigger: AAAAGAGGACAGTGACATCCAAATGGGTAGTGCTGTCCTTCCTCATACCCCAGGATCTAAAGCGTGGGCAGTTTTGACAAGTGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 90 bp TCTCAAAGAGTAAAGGTGAAATTGGGTCACTCTGATCCACAAGACTaGTCTCCTGGGTGTCCGAGTCATTCATTACCTTTTCCCGGGATT +
Preference number: 5 (lower is better)
Translates to: SQRVKVKLGHSDPQD*SPGCPSHSLPFPGI
Trigger: AATCCCGGGAAAAGGTAATGAATGACTCGGACACCCAGGAGAGCAGTCTTGTGGATCAGAGTGACCCAATTTCACCTTTACTCTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp GACTCAGGCATTGATATATGGCTAGGATTGATAAGTAAGGACCCCTaGTCAGATACATCGACAGAACCATGCAGAGGCATTGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: DSGIDIWLGLISKDP*SDTSTEPCRGIAEL
Trigger: CAGTTCTGCAATGCCTCTGCATGGTTCTGTCGATGTATCTGATCAGGGGTCCTTACTTATCAATCCTAGCCATATATCAATGCCTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp TTCACTACTGTAGGAAGGTTGAAGAGGTGTCTCACCATTGTATACTaGTTGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: FTTVGRLKRCLTIVY*LSRLRMEDVDSRSQ
Trigger: TTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGGTGAGACACCTCTTCAACCTTCCTACAGTAGTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp ACCAATACGAGACTCATGGCTACTATTACTGGCCTCATTGTATACTaGTTGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: TNTRLMATITGLIVY*LSRLRMEDVDSRSQ
Trigger: TTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTCCGGATTTGGCCATTaGGGGCACTGGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSGFGH*GHWKCL
Trigger: AAGGCATTTCCAGTGCCCCAAATGGCCAAATCCGGA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS TCA 90 bp CGAGTCATTCATTACCTTTTCCCGGGATTCTCTATAGGGCAAGCATaGCATACACTTATTCACAGGAAAGCGACCCCTATCTATGTCATC +
Preference number: 5 (lower is better)
Translates to: RVIHYLFPGFSIGQA*HTLIHRKATPIYVI
Trigger: GATGACATAGATAGGGGTCGCTTTCCTGTGAATAAGTGTATGTCATGCTTGCCCTATAGAGAATCCCGGGAAAAGGTAATGAATGACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp TCTTCTTCTGTATTCTCAAAGAGTAAAGGTGAAATTGGGTCACTCTaGTCCACAAGACTGCTCTCCTGGGTGTCCGAGTCATTCATTACC +
Preference number: 5 (lower is better)
Translates to: SSSVFSKSKGEIGSL*STRLLSWVSESFIT
Trigger: GGTAATGAATGACTCGGACACCCAGGAGAGCAGTCTTGTGGATCAGAGTGACCCAATTTCACCTTTACTCTTTGAGAATACAGAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 90 bp ATACGAGACTCATGGCTACTATTACTGGCCTCATTGTATACTGGTTaGGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAAATCA +
Preference number: 5 (lower is better)
Translates to: IRDSWLLLLASLYTG*VVCEWRMLIVGAKS
Trigger: TGATTTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAGTCTCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS CCA 90 bp AGGGAGGGGATGTCAATGATCCATTGTAAATGTAATACTTGTCAGTaGAGTTTGGCAGGAGGTTCTGCAAGACGAATGGATCTAAAGCAG +
Preference number: 5 (lower is better)
Translates to: REGMSMIHCKCNTCQ*SLAGGSARRMDLKQ
Trigger: CTGCTTTAGATCCATTCGTCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGTATTACATTTACAATGGATCATTGACATCCCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 90 bp ATGCAGATGGCGAAACATTTCACTACTGAAGGAAGCAGAGGAAAATaGGAGCAGAGGTGCATCATCATAGGAAGACAGGATGGATTCAAA +
Preference number: 5 (lower is better)
Translates to: MQMAKHFTTEGSRGK*EQRCIIIGRQDGFK
Trigger: TTTGAATCCATCCTGTCTTCCTATGATGATGCACCTCTGCTCCCATTTTCCTCTGCTTCCTTCAGTAGTGAAATGTTTCGCCATCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 90 bp TGCTTGAGATGCAGTGTGTGTAGGTTGAACTGGGAAGATAATTTCTaGAACGTGACTAACCCCCTGTTCAAAACCCTTAGTTGTGGGATA +
Preference number: 5 (lower is better)
Translates to: CLRCSVCRLNWEDNF*NVTNPLFKTLSCGI
Trigger: TATCCCACAACTAAGGGTTTTGAACAGGGGGTTAGTCACGTTCCAGAAATTATCTTCCCAGTTCAACCTACACACACTGCATCTCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGAACTCATGCTTGGCTaGGTCATTTCCCGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETELMLG*VISRQW
Trigger: CCACTGGCGGGAAATGACCAAGCCAAGCATGAGTTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGTACCTCCGTTTCCTaGCTGAGTATGGCCTCGACC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGTSVS*LSMAST
Trigger: GGTCGAGGCCATACTCAGCAAGGAAACGGAGGTACC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTGGGACTATCCGGATTaGGCCATTTGGGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSWDYPD*AIWGTG
Trigger: TCCAGTGCCCCAAATGGCCAAATCCGGATAGTCCCA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCTGCCTCTGAACTGTaGGATACTCCTGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETPASEL*DTPECP
Trigger: TGGGCACTCAGGAGTATCCAACAGTTCAGAGGCAGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS TCA 90 bp CGAATGTGCTTTAAGAAGCCAAATATGTTGACGGTTCCTTCATGTTaGATCTGCTGCAGCATACTGTCTAGCACAATGTATGTCCCCGTT +
Preference number: 5 (lower is better)
Translates to: RMCFKKPNMLTVPSC*ICCSILSSTMYVPV
Trigger: AACGGGGACATACATTGTGCTAGACAGTATGCTGCAGCAGATTCAACATGAAGGAACCGTCAACATATTTGGCTTCTTAAAGCACATTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 90 bp AGTGTTGGGAACATCACTCTTTCCAGAGAATTCAGATCCTCTTGTTaGAGATCGGTTAGTCTTGGCTTCATTGTATTTAGTCCCCATGTG +
Preference number: 5 (lower is better)
Translates to: SVGNITLSREFRSSC*RSVSLGFIVFSPHV
Trigger: CACATGGGGACTAAATACAATGAAGCCAAGACTAACCGATCTCCAACAAGAGGATCTGAATTCTCTGGAAAGAGTGATGTTCCCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGAACTCATGCTTGGCTaGGTCATTTCCCGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCELMLG*VISRQW
Trigger: CCACTGGCGGGAAATGACCAAGCCAAGCATGAGTTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCACCATTGTATACTGGTaGAGTCGTCTGCGAATGGAG +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFTIVYW*SRLRME
Trigger: CTCCATTCGCAGACGACTCAACCAGTATACAATGGT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTAGTGTCCCCAGATGCTaGAGATGCAGTGTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSVPRC*RCSVCR
Trigger: CCTACACACACTGCATCTCAAGCATCTGGGGACACT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGTGTCCCCAGATGCTaGAGATGCAGTGTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETSVPRC*RCSVCR
Trigger: CCTACACACACTGCATCTCAAGCATCTGGGGACACT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAGCCTGAAAGGAAGGTaGCAGCAACGCTTCAGTATT +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFSLKGR*QQRFSI
Trigger: AATACTGAAGCGTTGCTGCAACCTTCCTTTCAGGCT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCTGCCTCTGAACTGTaGGATACTCCTGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSASEL*DTPECP
Trigger: TGGGCACTCAGGAGTATCCAACAGTTCAGAGGCAGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGGGACTATCCGGATTaGGCCATTTGGGGCACTGGA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCWDYPD*AIWGTG
Trigger: TCCAGTGCCCCAAATGGCCAAATCCGGATAGTCCCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 90 bp AATGCCTTACTTCCAGCACATAGTCATCCTGTGTTGCTTCCAAGATaGAGTCTTGAACGATCAGTTTTTCCTCGTTCGAAAGGCATTTGT +
Preference number: 5 (lower is better)
Translates to: NALLPAHSHPVLLPR*SLERSVFPRSKGIC
Trigger: ACAAATGCCTTTCGAACGAGGAAAAACTGATCGTTCAAGACTTCATCTTGGAAGCAACACAGGATGACTATGTGCTGGAAGTAAGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTGTCAGTGGAGTTaGGCAGGAGGTTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSTCQWS*AGGSAR
Trigger: TCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGT...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACTTGTCAGTGGAGTTaGGCAGGAGGTTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTCQWS*AGGSAR
Trigger: TCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGACTTGCGGAAGGGTTaGAGAAACCGTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDLRKG*RNRMQM
Trigger: CATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGACTTGCGGAAGGGTTaGAGAAACCGTATGCAGATG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETDLRKG*RNRMQM
Trigger: CATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCAAAGATGGCAGCACTaGCTGGGGACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSQRWQH*LGTFAL
Trigger: AAGAGCAAAAGTCCCCAGCAAGTGCTGCCATCTTTG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACAAAGATGGCAGCACTaGCTGGGGACTTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETQRWQH*LGTFAL
Trigger: AAGAGCAAAAGTCCCCAGCAAGTGCTGCCATCTTTG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGTTGGGAGAAACCATaGTCAAGGAAATGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETCWEKP*SRKWAH
Trigger: GTGGGCCCATTTCCTTGACAATGGTTTCTCCCAACA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCCGGATTTGGCCATTaGGGGCACTGGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSGFGH*GHWKCL
Trigger: AAGGCATTTCCAGTGCCCCAAATGGCCAAATCCGGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTTGTCAGTGGAGTTaGGCAGGAGGTTCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTCQWS*AGGSAR
Trigger: TCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGGAGATCGGTTAGTCTaGGCTTCATTGTATTTAGTC +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFGDRLV*ASLYLV
Trigger: GACTAAATACAATGAAGCCAAGACTAACCGATCTCC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACCATTGTATACTGGTaGAGTCGTCTGCGAATGGAG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTIVYW*SRLRME
Trigger: CTCCATTCGCAGACGACTCAACCAGTATACAATGGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTGCAGTGTGTGTAGGTaGAACTGGGAAGATAATTTC +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFCSVCR*NWEDNF
Trigger: GAAATTATCTTCCCAGTTCAACCTACACACACTGCA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGCCTGAAAGGAAGGTaGCAGCAACGCTTCAGTATT +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETSLKGR*QQRFSI
Trigger: AATACTGAAGCGTTGCTGCAACCTTCCTTTCAGGCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGTTGGGAGAAACCATaGTCAAGGAAATGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCWEKP*SRKWAH
Trigger: GTGGGCCCATTTCCTTGACAATGGTTTCTCCCAACA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGAAGGAAGAAGCAACTaGGCTGTGGTCACAGAATCA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETEGRSN*AVVTES
Trigger: TGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAGAGTAAAGGTGAAATaGGGTCACTCTGATCCACAA +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFRVKVK*GHSDPQ
Trigger: TTGTGGATCAGAGTGACCCAATTTCACCTTTACTCT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGACAGCACTACCCATTaGGATGTCACTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETDSTTH*DVTVLF
Trigger: AAAGAGGACAGTGACATCCAAATGGGTAGTGCTGTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGACGGTTCCTTCATGTaGAATCTGCTGCAGCATACT +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDGSFM*NLLQHT
Trigger: AGTATGCTGCAGCAGATTCAACATGAAGGAACCGTC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCTGGGCTCATCTTTATTaGGCCAGTAGACAAACTCAT +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFWAHLY*ASRQTH
Trigger: ATGAGTTTGTCTACTGGCCAAATAAAGATGAGCCCA...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCCGGCCTCATCAAATaGATCATCTTGGCTACTTGG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPGLIK*IILATW
Trigger: CCAAGTAGCCAAGATGATCAATTTGATGAGGCCGGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCAACAAGTTTCCTCTGTaGTCTGTAGTATCCATAAGC +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFNKFPL*SVVSIS
Trigger: GCTTATGGATACTACAGACAACAGAGGAAACTTGTT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCCTTCAGATGACACATaGCATTTTCCCCAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSPSDDT*HFPQWK
Trigger: TTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCTTCAGATGACACATaGCATTTTCCCCAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETPSDDT*HFPQWK
Trigger: TTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGACATACCCAGACTGTaGCATTGTGAGAACTTCACA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDIPRL*HCENFT
Trigger: TGTGAAGTTCTCACAATGCAACAGTCTGGGTATGTC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGACATACCCAGACTGTaGCATTGTGAGAACTTCACA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETDIPRL*HCENFT
Trigger: TGTGAAGTTCTCACAATGCAACAGTCTGGGTATGTC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACCTGCCTGGAAAACTaGTACTGTTGTTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTCLEN*YCCSRK
Trigger: TTTCCGAGAACAACAGTACAAGTTTTCCAGGCAGGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTCAGCAGAAACCTCTTaGTACTCTGTTATGGGAACC +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSSAETS*YSVMGT
Trigger: GGTTCCCATAACAGAGTACAAAGAGGTTTCTGCTGA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATCAGCAGAAACCTCTTaGTACTCTGTTATGGGAACC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETSAETS*YSVMGT
Trigger: GGTTCCCATAACAGAGTACAAAGAGGTTTCTGCTGA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGCGAATGGAGGATGTaGATAGTAGGAGCCAAATCA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETCEWRM*IVGAKS
Trigger: TGATTTGGCTCCTACTATCAACATCCTCCATTCGCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACTACTGTAGGAAGGTaGAAGAGGTGTCTCACCATT +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTTVGR*KRCLTI
Trigger: AATGGTGAGACACCTCTTCAACCTTCCTACAGTAGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAACCATGCAGAGGCATaGCAGAACTGTAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETNHAEA*QNCKKQ
Trigger: CTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACTTGCTGGGGACTTTaGCTCTTAAGCAAACCTTGT +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTCWGL*LLSKPC
Trigger: ACAAGGTTTGCTTAAGAGCAAAAGTCCCCAGCAAGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTGGAAAAACTCGTCATaGCTGAACAAAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSWKNSS*LNKDGS
Trigger: GCTGCCATCTTTGTTCAGCAATGACGAGTTTTTCCA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGGAAAAACTCGTCATaGCTGAACAAAGATGGCAGC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETWKNSS*LNKDGS
Trigger: GCTGCCATCTTTGTTCAGCAATGACGAGTTTTTCCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGAAGGAAGAAGCAACTaGGCTGTGGTCACAGAATCA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCEGRSN*AVVTES
Trigger: TGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGACAGCACTACCCATTaGGATGTCACTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDSTTH*DVTVLF
Trigger: AAAGAGGACAGTGACATCCAAATGGGTAGTGCTGTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGACGGTTCCTTCATGTaGAATCTGCTGCAGCATACT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDGSFM*NLLQHT
Trigger: AGTATGCTGCAGCAGATTCAACATGAAGGAACCGTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCATACTGCTCCTCTGTTaGCACCAAATAATTCCTTTG +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFILLLC*HQIIPL
Trigger: CAAAGGAATTATTTGGTGCAAACAGAGGAGCAGTAT...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTCTCTAGTTTTGTCTaGCCTGTTGGTCCGGGTATG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCFSSFV*PVGPGM
Trigger: CATACCCGGACCAACAGGCAAGACAAAACTAGAGAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGATCATCTTGGCTACTaGGTAAACATCCATGGCGTT +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDHLGY*VNIHGV
Trigger: AACGCCATGGATGTTTACCAAGTAGCCAAGATGATC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS CCA 90 bp GTCATCTGTTTCCAGGACACCATCAGTATCCTTTTCATTAACATCTaGAAAACTGAAATCTGTGGACGTCTCATTATCATTAAGGCTATC +
Preference number: 5 (lower is better)
Translates to: VICFQDTISILFINI*KTEICGRLIIIKAI
Trigger: GATAGCCTTAATGATAATGAGACGTCCACAGATTTCAGTTTTCCAGATGTTAATGAAAAGGATACTGATGGTGTCCTGGAAACAGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCAGTGGAAAGTTATCTaGCTTGCCTTGAAGACCTTT +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSQWKVI*LALKTF
Trigger: AAAGGTCTTCAAGGCAAGCAAGATAACTTTCCACTG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCTTCAGATGACACATaGCATTTTCCCCAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPSDDT*HFPQWK
Trigger: TTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGACATACCCAGACTGTaGCATTGTGAGAACTTCACA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDIPRL*HCENFT
Trigger: TGTGAAGTTCTCACAATGCAACAGTCTGGGTATGTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTACTTCGGAAAACTTGTACTGTaGTTCTCGGAAATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: WSMETPEQYLHKLLSLYFGKLVL*FSEIVL
Trigger: CAAAACAATTTCCGAGAACAACAGTACAAGTTTTCC...GAAGTAGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACCTGCCTGGAAAACTaGTACTGTTGTTCTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTCLEN*YCCSRK
Trigger: TTTCCGAGAACAACAGTACAAGTTTTCCAGGCAGGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGAGATCGGTTAGTCTaGGCTTCATTGTATTTAGTC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETGDRLV*ASLYLV
Trigger: GACTAAATACAATGAAGCCAAGACTAACCGATCTCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTCAGCAGAAACCTCTTaGTACTCTGTTATGGGAACC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCSAETS*YSVMGT
Trigger: GGTTCCCATAACAGAGTACAAAGAGGTTTCTGCTGA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGCGAATGGAGGATGTaGATAGTAGGAGCCAAATCA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCCEWRM*IVGAKS
Trigger: TGATTTGGCTCCTACTATCAACATCCTCCATTCGCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTACTGTAGGAAGGTaGAAGAGGTGTCTCACCATT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTTVGR*KRCLTI
Trigger: AATGGTGAGACACCTCTTCAACCTTCCTACAGTAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAACCATGCAGAGGCATaGCAGAACTGTAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCNHAEA*QNCKKQ
Trigger: CTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATGCAGTGTGTGTAGGTaGAACTGGGAAGATAATTTC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETCSVCR*NWEDNF
Trigger: GAAATTATCTTCCCAGTTCAACCTACACACACTGCA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACTTGCTGGGGACTTTaGCTCTTAAGCAAACCTTGT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTCWGL*LLSKPC
Trigger: ACAAGGTTTGCTTAAGAGCAAAAGTCCCCAGCAAGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAACAGAATCATCTCTGTaGGGAGAAACCATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETTESSL*GETIVK
Trigger: CTTGACAATGGTTTCTCCCAACAGAGATGATTCTGT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAGAGTAAAGGTGAAATaGGGTCACTCTGATCCACAA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETRVKVK*GHSDPQ
Trigger: TTGTGGATCAGAGTGACCCAATTTCACCTTTACTCT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCAGCAATGTAAGCCTTaGGTCTGTTGTAACCATCAA +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSQQCKP*VCCNHQ
Trigger: TTGATGGTTACAACAGACCAAAGGCTTACATTGCTG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATTGTTTCTCTAGTTTaGTCTTGCCTGTTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCIVSLV*SCLLVR
Trigger: CCGGACCAACAGGCAAGACAAAACTAGAGAAACAAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGATCATCTTGGCTACTaGGTAAACATCCATGGCGTT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDHLGY*VNIHGV
Trigger: AACGCCATGGATGTTTACCAAGTAGCCAAGATGATC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAAACAAGTTTCCTCTGTaGTCTGTAGTATCCATAAGC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETNKFPL*SVVSIS
Trigger: GCTTATGGATACTACAGACAACAGAGGAAACTTGTT...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCAGTGGAAAGTTATCTaGCTTGCCTTGAAGACCTTT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCQWKVI*LALKTF
Trigger: AAAGGTCTTCAAGGCAAGCAAGATAACTTTCCACTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTTTAGGTAGTAAATTATaGAGAATGGCACCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSLGSKL*RMAPKS
Trigger: GGACTTGGGTGCCATTCTCAATAATTTACTACCTAA...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACATTAGGTAGTAAATTATaGAGAATGGCACCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETLGSKL*RMAPKS
Trigger: GGACTTGGGTGCCATTCTCAATAATTTACTACCTAA...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCATATTCTTCCTCCTaGATTATTTCTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETPYSSS*IISSVP
Trigger: TGGGACTGAAGAAATAATCAAGGAGGAAGAATATGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGAGATCGGTTAGTCTaGGCTTCATTGTATTTAGTC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGDRLV*ASLYLV
Trigger: GACTAAATACAATGAAGCCAAGACTAACCGATCTCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTCCTCGATTCATCAATTaGTATGTCTGTGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSPRFIN*YVCGVN
Trigger: GTTAACTCCACAGACATACAAATTGATGAATCGAGG...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACACCTCGATTCATCAATTaGTATGTCTGTGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETPRFIN*YVCGVN
Trigger: GTTAACTCCACAGACATACAAATTGATGAATCGAGG...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTACAGAATCATCTCTGTaGGGAGAAACCATTGTCAAG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCTESSL*GETIVK
Trigger: CTTGACAATGGTTTCTCCCAACAGAGATGATTCTGT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCAGCAATGTAAGCCTTaGGTCTGTTGTAACCATCAA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCQQCKP*VCCNHQ
Trigger: TTGATGGTTACAACAGACCAAAGGCTTACATTGCTG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTGGGCTCATCTTTATTaGGCCAGTAGACAAACTCAT +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCWAHLY*ASRQTH
Trigger: ATGAGTTTGTCTACTGGCCAAATAAAGATGAGCCCA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTAACAAGTTTCCTCTGTaGTCTGTAGTATCCATAAGC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCNKFPL*SVVSIS
Trigger: GCTTATGGATACTACAGACAACAGAGGAAACTTGTT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp TTGACATTTAAAGCACACATCTGTATTGCATGTTGCAGTCTGCTTCAAGAAACAGGAAAACTTGTACTGTaGTTCTCGGAAATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: LTFKAHICIACCSLLQETGKLVL*FSEIVL
Trigger: CAAAACAATTTCCGAGAACAACAGTACAAGTTTTCC...TGTTTCTTGAAGCAGACTGCAACATGCAATACAGATGTGTGCTTTAAATGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202579.4
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTTTAGGTAGTAAATTATaGAGAATGGCACCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCLGSKL*RMAPKS
Trigger: GGACTTGGGTGCCATTCTCAATAATTTACTACCTAA...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCATATTCTTCCTCCTaGATTATTTCTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPYSSS*IISSVP
Trigger: TGGGACTGAAGAAATAATCAAGGAGGAAGAATATGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTCCTCGATTCATCAATTaGTATGTCTGTGGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCPRFIN*YVCGVN
Trigger: GTTAACTCCACAGACATACAAATTGATGAATCGAGG...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTATACTGCTCCTCTGTTaGCACCAAATAATTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCILLLC*HQIIPL
Trigger: CAAAGGAATTATTTGGTGCAAACAGAGGAGCAGTAT...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AAATTTGGTCCATGGAGACACCAGAGCAGTATTTACATAAGTTACTATCACTCTGACATAAGCGTGACTTaGAAGCTTTCACAATTTATG +
Preference number: 5 (lower is better)
Translates to: KFGPWRHQSSIYISYYHSDISVT*KLSQFM
Trigger: CATAAATTGTGAAAGCTTCAAAGTCACGCTTATGTC...AGAGTGATAGTAACTTATGTAAATACTGCTCTGGTGTCTCCATGGACCAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGGAAAACTTGTACTGTaGTTCTCGGAAATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCGKLVL*FSEIVL
Trigger: CAAAACAATTTCCGAGAACAACAGTACAAGTTTTCC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS-3UTR CAA 90 bp AGCAGTATTTACATAAGTTACTATCACTCTACTTCAGGTGAATACTGCAGTTGTGACATAAGCGTGACTTaGAAGCTTTCACAATTTATG +
Preference number: 5 (lower is better)
Translates to: SSIYISYYHSTSGEYCSCDISVT*KLSQFM
Trigger: CATAAATTGTGAAAGCTTCAAAGTCACGCTTATGTC...ACAACTGCAGTATTCACCTGAAGTAGAGTGATAGTAACTTATGTAAATACTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp TGGACAACAACTGGCCCGACTGCATGGCGCTTGGCCTaGGCAGCCTTTCTCACAAAGGCCAGCACGGGCAGG +
Preference number: 6 (lower is better)
Translates to: WTTTGPTAWRLA*AAFLTKASTGR
Trigger: CCTGCCCGTGCTGGCCTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTTGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp TGCAGTGGACAACAACTGGCCCGACTGCATGGCGCTTaGCCTGGGCAGCCTTTCTCACAAAGGCCAGCACGG +
Preference number: 6 (lower is better)
Translates to: CSGQQLARLHGA*PGQPFSQRPAR
Trigger: CCGTGCTGGCCTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CAA 72 bp CTGCAGTGGACAACAACTGGCCCGACTGCATGGCGCTaGGCCTGGGCAGCCTTTCTCACAAAGGCCAGCACG +
Preference number: 6 (lower is better)
Translates to: LQWTTTGPTAWR*AWAAFLTKAST
Trigger: CGTGCTGGCCTTTGTGAGAAAGGCTGCCCAGGCCAAGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS GCA 72 bp GCACAATGTATGTCCCCGTTCTCCCCACGCCAGCACTaGAGTGGACAACAACTGGCCCGACTGCATGGCGCT +
Preference number: 6 (lower is better)
Translates to: AQCMSPFSPRQH*SGQQLARLHGA
Trigger: AGCGCCATGCAGTCGGGCCAGTTGTTGTCCACTGCAGTGCTGGCGTGGGGAGAACGGGGACATACATTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS GCA 72 bp CTGGCCTCTGCCTCTGAACTGTTGGATACTCCTGAGTaGCCACTAGTAACAGATGGTGTGGAGGACCGTGGA +
Preference number: 6 (lower is better)
Translates to: LASASELLDTPE*PLVTDGVEDRG
Trigger: TCCACGGTCCTCCACACCATCTGTTACTAGTGGGCACTCAGGAGTATCCAACAGTTCAGAGGCAGAGGCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS CCA 72 bp AGGCAAAGCTGCACCATTACTGTCCAGAGAGGTGGATaGGTTCTCTTCCTGCCTTGTGCTGACGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RQSCTITVQRGG*VLFLPCADEAE
Trigger: CTCAGCCTCGTCAGCACAAGGCAGGAAGAGAACCCATCCACCTCTCTGGACAGTAATGGTGCAGCTTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CAA 72 bp GAAAGCTCTCTCGGCCGGATCCAGTCTCAGACTGCGTaGTTAGGTCTGTGGAGCCAGGAAACCATACACTCC +
Preference number: 6 (lower is better)
Translates to: ESSLGRIQSQTA*LGLWSQETIHS
Trigger: GGAGTGTATGGTTTCCTGGCTCCACAGACCTAACAACGCAGTCTGAGACTGGATCCGGCCGAGAGAGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 72 bp TGGAGAAAGCTCTCTCGGCCGGATCCAGTCTCAGACTaGGTTGTTAGGTCTGTGGAGCCAGGAAACCATACA +
Preference number: 6 (lower is better)
Translates to: WRKLSRPDPVSD*VVRSVEPGNHT
Trigger: TGTATGGTTTCCTGGCTCCACAGACCTAACAACGCAGTCTGAGACTGGATCCGGCCGAGAGAGCTTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 72 bp CAGATGGTGTGGAGGACCGTGGAGATCCCGGAGCTATaGCTGTGTCATCTGTTTCCAGGACACCATCAGTAT +
Preference number: 6 (lower is better)
Translates to: QMVWRTVEIPEL*LCHLFPGHHQY
Trigger: ATACTGATGGTGTCCTGGAAACAGATGACACAGGCATAGCTCCGGGATCTCCACGGTCCTCCACACCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CAATGTGTCCGAAGCAGCACGAGTAGTGGCCTGATGTaGCGCCACATCAGAATACTGAACAAGGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: QCVRSSTSSGLM*RHIRILNKAGF
Trigger: GAACCCAGCCTTGTTCAGTATTCTGATGTGGCGTCACATCAGGCCACTACTCGTGCTGCTTCGGACACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp AATGACACACCAACACTGGGGGATACAGGCGTAGCATaGAAGGCCGAATCACTACTTGAAGCAGCAGGGGTA +
Preference number: 6 (lower is better)
Translates to: NDTPTLGDTGVA*KAESLLEAAGV
Trigger: TACCCCTGCTGCTTCAAGTAGTGATTCGGCCTTGCATGCTACGCCTGTATCCCCCAGTGTTGGTGTGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp AACAGCAAATCACCCCTAGCCACCAGCAGAGAAGCATaGAAAGACAGCTCATCCCTCTCAGCAGCTGAAGTG +
Preference number: 6 (lower is better)
Translates to: NSKSPLATSREA*KDSSSLSAAEV
Trigger: CACTTCAGCTGCTGAGAGGGATGAGCTGTCTTTGCATGCTTCTCTGCTGGTGGCTAGGGGTGATTTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp CCATTACTGTCCAGAGAGGTGGATGGGTTCTCTTCCTaGCTTGTGCTGACGAGGCTGAGGACTACTTTGTAC +
Preference number: 6 (lower is better)
Translates to: PLLSREVDGFSS*LVLTRLRTTLY
Trigger: GTACAAAGTAGTCCTCAGCCTCGTCAGCACAAGGCAGGAAGAGAACCCATCCACCTCTCTGGACAGTAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CAA 90 bp GTTGAGGGGCTGGAGCCTGAAGAGTCATCGGCTCCCGTATCGAGCTaGAAATCAGTCAGGAAGTTTTCTTCCTCACTGACGTCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: VEGLEPEESSAPVSS*KSVRKFSSSLTSAE
Trigger: TTCTGCTGACGTCAGTGAGGAAGAAAACTTCCTGACTGATTTCAAGCTCGATACGGGAGCCGATGACTCTTCAGGCTCCAGCCCCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp TGCTCCTGTGTAGGACCAGCCAATCTCTTCAACAAGTTTCCTCTGTaGTCTGTAGTATCCATAAGCCCAGTCCAGGCGACACAGGCACAG +
Preference number: 6 (lower is better)
Translates to: CSCVGPANLFNKFPL*SVVSISPVQATQAQ
Trigger: CTGTGCCTGTGTCGCCTGGACTGGGCTTATGGATACTACAGACAACAGAGGAAACTTGTTGAAGAGATTGGCTGGTCCTACACAGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp GTAAGGACCCCTGATCAGATACATCGACAGAACCATGCAGAGGCATaGCAGAACTGTAAGAAACAGTGGGTACGTGGTGGGAGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: VRTPDQIHRQNHAEA*QNCKKQWVRGGSPQ
Trigger: TTGAGGGCTCCCACCACGTACCCACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTTCTGTCGATGTATCTGATCAGGGGTCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp TCATGGCGTCATAAACGACCCGAGGTCTTTCCCATGTaGCCAGAAGGCTGGTGTAATTCTCAGGGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: SWRHKRPEVFPM*PEGWCNSQGQL
Trigger: AAGCTGACCCTGAGAATTACACCAGCCTTCTGGTCACATGGGAAAGACCTCGGGTCGTTTATGACGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS TCA 72 bp CCACCTCCCACTAAATCGGCATCAGATCTGGCGCTCTaGGTCAGCTTAGAAGTAGCTGTAGAAGGAAGAAGC +
Preference number: 6 (lower is better)
Translates to: PPPTKSASDLAL*VSLEVAVEGRS
Trigger: GCTTCTTCCTTCTACAGCTACTTCTAAGCTGACTCAGAGCGCCAGATCTGATGCCGATTTAGTGGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CAAAAAGTTCCTGCTGTTACTCCCCCGTGCTCATCGTaGACAATCATGGGCCCATCCCTGTTAGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: QKVPAVTPPCSS*TIMGPSLLAAS
Trigger: AGAAGCTGCTAACAGGGATGGGCCCATGATTGTTCACGATGAGCACGGGGGAGTAACAGCAGGAACTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 72 bp GTGCTGACGAGGCTGAGGACTACTTTGTACAGAAACTaGTACTGCTCAATGTCAGTGAAGACTCCCGGCCTC +
Preference number: 6 (lower is better)
Translates to: VLTRLRTTLYRN*YCSMSVKTPGL
Trigger: GAGGCCGGGAGTCTTCACTGACATTGAGCAGTATCAGTTTCTGTACAAAGTAGTCCTCAGCCTCGTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp CAAATCAAGTGGTCTGGAGGATGGAGTGAAAGCCTGTaGTGTCACTTCGGTTGGGAGGTAGGCAAAGGTAGA +
Preference number: 6 (lower is better)
Translates to: QIKWSGGWSESL*CHFGWEVGKGR
Trigger: TCTACCTTTGCCTACCTCCCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTTGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 72 bp GTTGATAGTAGGAGCCAAATCAAGTGGTCTGGAGGATaGAGTGAAAGCCTGTGGTGTCACTTCGGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: VDSRSQIKWSGG*SESLWCHFGWE
Trigger: CTCCCAACCGAAGTGACACCACAGGCTTTCACTCCATCCTCCAGACCACTTGATTTGGCTCCTACTATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 72 bp GACTCCAACCCCTCAGCTAGACCAATACGAGACTCATaGCTACTATTACTGGCCTCTGCCTCTGAACTGTTG +
Preference number: 6 (lower is better)
Translates to: DSNPSARPIRDS*LLLLASASELL
Trigger: CAACAGTTCAGAGGCAGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGTCTAGCTGAGGGGTTGGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS CAA 72 bp GCTAAGCCCGGGTTTAAGCCAAGTGTCCCCAGATGCTaGAGATGCAGTGTGTGTAGGTTGAACTGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: AKPGFKPSVPRC*RCSVCRLNWED
Trigger: ATCTTCCCAGTTCAACCTACACACACTGCATCTCAAGCATCTGGGGACACTTGGCTTAAACCCGGGCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp TCACTACTTGAAGCAGCAGGGGTAGTGTTGAGGGTCTaGTTGTCAAGCAACAAAGGGGTGGCTAGAGGAAAG +
Preference number: 6 (lower is better)
Translates to: SLLEAAGVVLRV*LSSNKGVARGK
Trigger: CTTTCCTCTAGCCACCCCTTTGTTGCTTGACAATCAGACCCTCAACACTACCCCTGCTGCTTCAAGTAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp AGAAGCATGCAAAGACAGCTCATCCCTCTCAGCAGCTaGAGTGACTTGCGGAAGGGTTTGAGAAACCGTATG +
Preference number: 6 (lower is better)
Translates to: RSMQRQLIPLSS*SDLRKGLRNRM
Trigger: CATACGGTTTCTCAAACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGATGAGCTGTCTTTGCATGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CTTGTCAAAACTGCCCACGCTTTAGATCCTGGGGTATaGGGAAGGACAGCACTACCCATTTGGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: LVKTAHALDPGV*GRTALPIWMSL
Trigger: CAGTGACATCCAAATGGGTAGTGCTGTCCTTCCTCATACCCCAGGATCTAAAGCGTGGGCAGTTTTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp AACCATGCAGAGGCATTGCAGAACTGTAAGAAACAGTaGGTACGTGGTGGGAGCCCTCAACGGTATAAGAAG +
Preference number: 6 (lower is better)
Translates to: NHAEALQNCKKQ*VRGGSPQRYKK
Trigger: CTTCTTATACCGTTGAGGGCTCCCACCACGTACCCACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp GGGGGTTCCAGCCAGTATTGGATCACTAGGCACAGATaGGAGAGCAGTTTTAAGCAAGGTGTCAACATCAGA +
Preference number: 6 (lower is better)
Translates to: GGSSQYWITRHR*ESSFKQGVNIR
Trigger: TCTGATGTTGACACCTTGCTTAAAACTGCTCTCCCATCTGTGCCTAGTGATCCAATACTGGCTGGAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp GCAGCATGCTTTCGCTTGAACCAGACTCTGATGCCATaGGATGAGACACGGAAGAGCTACTTTGTTCAACCT +
Preference number: 6 (lower is better)
Translates to: AACFRLNQTLMP*DETRKSYFVQP
Trigger: AGGTTGAACAAAGTAGCTCTTCCGTGTCTCATCCCATGGCATCAGAGTCTGGTTCAAGCGAAAGCATGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp CCTGATCAGATACATCGACAGAACCATGCAGAGGCATaGCAGAACTGTAAGAAACAGTGGGTACGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: PDQIHRQNHAEA*QNCKKQWVRGG
Trigger: CCCACCACGTACCCACTGTTTCTTACAGTTCTGCAATGCCTCTGCATGGTTCTGTCGATGTATCTGATCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 90 bp AGCATCTGGAGAAAACGACTCGGTTGTCTCCCTCGATTCATCAATTaGTATGTCTGTGGAGTTAACCTGGAGAAAGCTCTCTCGGCCGGA +
Preference number: 6 (lower is better)
Translates to: SIWRKRLGCLPRFIN*YVCGVNLEKALSAG
Trigger: TCCGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGACATACAAATTGATGAATCGAGGGAGACAACCGAGTCGTTTTCTCCAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS TCA 72 bp AGGTGCATCATCATAGGAAGACAGGATGGATTCAAATaGCACACCAACACTGGGGGATACAGGCGTAGCATG +
Preference number: 6 (lower is better)
Translates to: RCIIIGRQDGFK*HTNTGGYRRSM
Trigger: CATGCTACGCCTGTATCCCCCAGTGTTGGTGTGTCATTTGAATCCATCCTGTCTTCCTATGATGATGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp TCCCTCTCAGCAGCTGAAGTGACTTGCGGAAGGGTTTaGGAAACCGTATGCAGATGGCGAAACATTTCACTA +
Preference number: 6 (lower is better)
Translates to: SLSAAEVTCGRV*ETVCRWRNISL
Trigger: TAGTGAAATGTTTCGCCATCTGCATACGGTTTCTCAAACCCTTCCGCAAGTCACTTCAGCTGCTGAGAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp GGGATGAAATGCCCACCCTTGATCTTTCCACAGGGATaGTGGACGATGTTCTGTTCTTCTCCCTGTTACACT +
Preference number: 6 (lower is better)
Translates to: GMKCPPLIFPQG*WTMFCSSPCYT
Trigger: AGTGTAACAGGGAGAAGAACAGAACATCGTCCATCATCCCTGTGGAAAGATCAAGGGTGGGCATTTCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS GCA 72 bp TTCCAGGCTTTCAGCTATATTTCCATCAGGCAAAGCTaGACCATTACTGTCCAGAGAGGTGGATGGGTTCTC +
Preference number: 6 (lower is better)
Translates to: FQAFSYISIRQS*TITVQRGGWVL
Trigger: GAGAACCCATCCACCTCTCTGGACAGTAATGGTGCAGCTTTGCCTGATGGAAATATAGCTGAAAGCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp CTCGATTCATCAATTTGTATGTCTGTGGAGTTAACCTaGAGAAAGCTCTCTCGGCCGGATCCAGTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: LDSSICMSVELT*RKLSRPDPVSD
Trigger: GTCTGAGACTGGATCCGGCCGAGAGAGCTTTCTCCAGGTTAACTCCACAGACATACAAATTGATGAATCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 72 bp ATGGGAGCAGAGGTGCATCATCATAGGAAGACAGGATaGATTCAAATGACACACCAACACTGGGGGATACAG +
Preference number: 6 (lower is better)
Translates to: MGAEVHHHRKTG*IQMTHQHWGIQ
Trigger: CTGTATCCCCCAGTGTTGGTGTGTCATTTGAATCCATCCTGTCTTCCTATGATGATGCACCTCTGCTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp CAGCTAGACCAATACGAGACTCATGGCTACTATTACTaGCCTCTGCCTCTGAACTGTTGGATACTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: QLDQYETHGYYY*PLPLNCWILLS
Trigger: ACTCAGGAGTATCCAACAGTTCAGAGGCAGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGTCTAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000090568.7
CDS CAA 72 bp CTAACGTCCAGATGTGCGCTTTGGAAAAACTCGTCATaGCTGAACAAAGATGGCAGCACTTGCTGGGGACTT +
Preference number: 6 (lower is better)
Translates to: LTSRCALWKNSS*LNKDGSTCWGL
Trigger: AAGTCCCCAGCAAGTGCTGCCATCTTTGTTCAGCAATGACGAGTTTTTCCAAAGCGCACATCTGGACGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 90 bp GTAGAAGGAAGAAGCAACTTGGCTGTGGTCACAGAATCATCTCTGTaGGGAGAAACCATTGTCAAGGAAATGGGCCCACTTCCTAATGGA +
Preference number: 6 (lower is better)
Translates to: VEGRSNLAVVTESSL*GETIVKEMGPLPNG
Trigger: TCCATTAGGAAGTGGGCCCATTTCCTTGACAATGGTTTCTCCCAACAGAGATGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp GTATTCTCAAAGAGTAAAGGTGAAATTGGGTCACTCTaGTCCACAAGACTGCTCTCCTGGGTGTCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: VFSKSKGEIGSL*STRLLSWVSES
Trigger: TGACTCGGACACCCAGGAGAGCAGTCTTGTGGATCAGAGTGACCCAATTTCACCTTTACTCTTTGAGAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp TACTGTGTGACTAGGCGCCCACTGGATCTTCCTTTCTaGGAGCCCTTCTTTAACTTTGTGTTTCTTAGGGTG +
Preference number: 6 (lower is better)
Translates to: YCVTRRPLDLPF*EPFFNFVFLRV
Trigger: CACCCTAAGAAACACAAAGTTAAAGAAGGGCTCTCAGAAAGGAAGATCCAGTGGGCGCCTAGTCACACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 72 bp GTTTCCTTGCTGAGTATGGCCTCGACCAGTGTATCGTaGATGAAGACATACTGCTCCTCTGTTTGCACCAAA +
Preference number: 6 (lower is better)
Translates to: VSLLSMASTSVS*MKTYCSSVCTK
Trigger: TTTGGTGCAAACAGAGGAGCAGTATGTCTTCATTCACGATACACTGGTCGAGGCCATACTCAGCAAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CAA 72 bp GGAAGGTTGAAGAGGTGTCTCACCATTGTATACTGGTaGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGG +
Preference number: 6 (lower is better)
Translates to: GRLKRCLTIVYW*SRLRMEDVDSR
Trigger: CCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGGTGAGACACCTCTTCAACCTTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp AAGCAAGGTGTCAACATCAGAAGCCTGAAAGGAAGGTaGCAGCAACGCTTCAGTATTAAAAGGAGTTGCGGC +
Preference number: 6 (lower is better)
Translates to: KQGVNIRSLKGR*QQRFSIKRSCG
Trigger: GCCGCAACTCCTTTTAATACTGAAGCGTTGCTGCAACCTTCCTTTCAGGCTTCTGATGTTGACACCTTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp CTGTGGTCACAGAATCATCTCTGTTGGGAGAAACCATaGTCAAGGAAATGGGCCCACTTCCTAATGGAACAG +
Preference number: 6 (lower is better)
Translates to: LWSQNHLCWEKP*SRKWAHFLMEQ
Trigger: CTGTTCCATTAGGAAGTGGGCCCATTTCCTTGACAATGGTTTCTCCCAACAGAGATGATTCTGTGACCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp AGAAGCAACTTGGCTGTGGTCACAGAATCATCTCTGTaGGGAGAAACCATTGTCAAGGAAATGGGCCCACTT +
Preference number: 6 (lower is better)
Translates to: RSNLAVVTESSL*GETIVKEMGPL
Trigger: AAGTGGGCCCATTTCCTTGACAATGGTTTCTCCCAACAGAGATGATTCTGTGACCACAGCCAAGTTGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 90 bp ACTACTGTAGGAAGGTTGAAGAGGTGTCTCACCATTGTATACTGGTaGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAAATC +
Preference number: 6 (lower is better)
Translates to: TTVGRLKRCLTIVYW*SRLRMEDVDSRSQI
Trigger: GATTTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGGTGAGACACCTCTTCAACCTTCCTACAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CATTACCTTTTCCCGGGATTCTCTATAGGGCAAGCATaGCATACACTTATTCACAGGAAAGCGACCCCTATC +
Preference number: 6 (lower is better)
Translates to: HYLFPGFSIGQA*HTLIHRKATPI
Trigger: GATAGGGGTCGCTTTCCTGTGAATAAGTGTATGTCATGCTTGCCCTATAGAGAATCCCGGGAAAAGGTAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CCCATTTGGATGTCACTGTCCTCTTTTCCATCATTGTaGTTCTGGGGTAGCATACTTGGTGGTGGTGACTTA +
Preference number: 6 (lower is better)
Translates to: PIWMSLSSFPSL*FWGSILGGGDL
Trigger: TAAGTCACCACCACCAAGTATGCTACCCCAGAATCACAATGATGGAAAAGAGGACAGTGACATCCAAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp GTAAAGGTGAAATTGGGTCACTCTGATCCACAAGACTaGTCTCCTGGGTGTCCGAGTCATTCATTACCTTTT +
Preference number: 6 (lower is better)
Translates to: VKVKLGHSDPQD*SPGCPSHSLPF
Trigger: AAAAGGTAATGAATGACTCGGACACCCAGGAGAGCAGTCTTGTGGATCAGAGTGACCCAATTTCACCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp GACGTCTCATTATCATTAAGGCTATCTGAGGTGCCTTaGCCTGACCCACTCTCTTCATCACTTGTCAAAACT +
Preference number: 6 (lower is better)
Translates to: DVSLSLRLSEVP*PDPLSSSLVKT
Trigger: AGTTTTGACAAGTGATGAAGAGAGTGGGTCAGGGCAAGGCACCTCAGATAGCCTTAATGATAATGAGACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp TTGGTGCATAAGGGTTGTAAGAGCACAAAAAGTTCCTaGTGTTACTCCCCCGTGCTCATCGTGAACAATCAT +
Preference number: 6 (lower is better)
Translates to: LVHKGCKSTKSS*CYSPVLIVNNH
Trigger: ATGATTGTTCACGATGAGCACGGGGGAGTAACAGCAGGAACTTTTTGTGCTCTTACAACCCTTATGCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp ATAGCCTCGGGCATGTCTGAAGAAGTTATGTATCCATaGGATAGATTATCTGAGGAAAAGGGGACAGTGGAG +
Preference number: 6 (lower is better)
Translates to: IASGMSEEVMYP*DRLSEEKGTVE
Trigger: CTCCACTGTCCCCTTTTCCTCAGATAATCTATCCCATGGATACATAACTTCTTCAGACATGCCCGAGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 72 bp GTAGGAAGGTTGAAGAGGTGTCTCACCATTGTATACTaGTTGAGTCGTCTGCGAATGGAGGATGTTGATAGT +
Preference number: 6 (lower is better)
Translates to: VGRLKRCLTIVY*LSRLRMEDVDS
Trigger: ACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGGTGAGACACCTCTTCAACCTTCCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp GTAGACAAACTCATCCTCTGCCATGTTTTGACCATCTaGAATCATAACCACCAGCTGGGCATTATGATCCCA +
Preference number: 6 (lower is better)
Translates to: VDKLILCHVLTI*NHNHQLGIMIP
Trigger: TGGGATCATAATGCCCAGCTGGTGGTTATGATTCCAGATGGTCAAAACATGGCAGAGGATGAGTTTGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp CAGCTAGACCAATACGAGACTCATGGCTACTATTACTaGCCTCATTGTATACTGGTTGAGTCGTCTGCGAAT +
Preference number: 6 (lower is better)
Translates to: QLDQYETHGYYY*PHCILVESSAN
Trigger: ATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAGTCTCGTATTGGTCTAGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS CAA 72 bp GTCAGCTTAGAAGTAGCTGTAGAAGGAAGAAGCAACTaGGCTGTGGTCACAGAATCATCTCTGTTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: VSLEVAVEGRSN*AVVTESSLLGE
Trigger: TTCTCCCAACAGAGATGATTCTGTGACCACAGCCAAGTTGCTTCTTCCTTCTACAGCTACTTCTAAGCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp CTCATGGCTACTATTACTGGCCTCATTGTATACTGGTaGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGG +
Preference number: 6 (lower is better)
Translates to: LMATITGLIVYW*SRLRMEDVDSR
Trigger: CCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS CAA 90 bp GGGATGTCAATGATCCATTGTAAATGTAATACTTGTCAGTGGAGTTaGGCAGGAGGTTCTGCAAGACGAATGGATCTAAAGCAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GMSMIHCKCNTCQWS*AGGSARRMDLKQPA
Trigger: AGCAGGCTGCTTTAGATCCATTCGTCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGTATTACATTTACAATGGATCATTGACATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp TCAGTCAGGAAGTTTTCTTCCTCACTGACGTCAGCAGAAACCTCTTaGTACTCTGTTATGGGAACCGTATTTAAGGATTCTGCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: SVRKFSSSLTSAETS*YSVMGTVFKDSAVP
Trigger: TGGGACTGCAGAATCCTTAAATACGGTTCCCATAACAGAGTACAAAGAGGTTTCTGCTGACGTCAGTGAGGAAGAAAACTTCCTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp AATACGAGACTCATGGCTACTATTACTGGCCTCATTGTATACTGGTaGAGTCGTCTGCGAATGGAGGATGTTGATAGTAGGAGCCAAATC +
Preference number: 6 (lower is better)
Translates to: NTRLMATITGLIVYW*SRLRMEDVDSRSQI
Trigger: GATTTGGCTCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGAGTCTCGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS TCA 72 bp TCATGGCTACTATTACTGGCCTCATTGTATACTGGTTaGGTCGTCTGCGAATGGAGGATGTTGATAGTAGGA +
Preference number: 6 (lower is better)
Translates to: SWLLLLASLYTG*VVCEWRMLIVG
Trigger: TCCTACTATCAACATCCTCCATTCGCAGACGACTCAACCAGTATACAATGAGGCCAGTAATAGTAGCCATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202102.2
CDS CCA 72 bp TGCAGTGTGTGTAGGTTGAACTGGGAAGATAATTTCTaGAACGTGACTAACCCCCTGTTCAAAACCCTTAGT +
Preference number: 6 (lower is better)
Translates to: CSVCRLNWEDNF*NVTNPLFKTLS
Trigger: ACTAAGGGTTTTGAACAGGGGGTTAGTCACGTTCCAGAAATTATCTTCCCAGTTCAACCTACACACACTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp AACTCGTCATTGCTGAACAAAGATGGCAGCACTTGCTaGGGACTTTTGCTCTTAAGCAAACCTTGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: NSSLLNKDGSTC*GLLLLSKPCSE
Trigger: TTCTGAACAAGGTTTGCTTAAGAGCAAAAGTCCCCAGCAAGTGCTGCCATCTTTGTTCAGCAATGACGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp CCTTCTAAGCTATGTTCCGATCCTTCAGATGACACATaGCATTTTCCCCAGTGGAAAGTTATCTTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: PSKLCSDPSDDT*HFPQWKVILLA
Trigger: GGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGGATCGGAACATAGCTTAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 72 bp AGAAAACGACTCGGTTGTCTCCCTCGATTCATCAATTaGTATGTCTGTGGAGTTAACCTGGAGAAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: RKRLGCLPRFIN*YVCGVNLEKAL
Trigger: GAGAGCTTTCTCCAGGTTAACTCCACAGACATACAAATTGATGAATCGAGGGAGACAACCGAGTCGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp AACTTCTGTCCTTCTAAGCTATGTTCCGATCCTTCAGATGACACATaGCATTTTCCCCAGTGGAAAGTTATCTTGCTTGCCTTGAAGACC +
Preference number: 6 (lower is better)
Translates to: NFCPSKLCSDPSDDT*HFPQWKVILLALKT
Trigger: GGTCTTCAAGGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGGATCGGAACATAGCTTAGAAGGACAGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS GCA 72 bp CTTCTAAGCTATGTTCCGATCCTTCAGATGACACATTaGATTTTCCCCAGTGGAAAGTTATCTTGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: LLSYVPILQMTH*IFPSGKLSCLP
Trigger: AGGCAAGCAAGATAACTTTCCACTGGGGAAAATGCAATGTGTCATCTGAAGGATCGGAACATAGCTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 90 bp TACTTCCAGCACATAGTCATCCTGTGTTGCTTCCAAGATGAAGTCTaGAACGATCAGTTTTTCCTCGTTCGAAAGGCATTTGTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: YFQHIVILCCFQDEV*NDQFFLVRKAFVFF
Trigger: GAAGAACACAAATGCCTTTCGAACGAGGAAAAACTGATCGTTCAAGACTTCATCTTGGAAGCAACACAGGATGACTATGTGCTGGAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 72 bp GTGGAAAGTTATCTTGCTTGCCTTGAAGACCTTTTCTaGAAGTCCTCCACTGAGATAGTAGTCATTAGTGAG +
Preference number: 6 (lower is better)
Translates to: VESYLACLEDLF*KSSTEIVVISE
Trigger: CTCACTAATGACTACTATCTCAGTGGAGGACTTTCAGAAAAGGTCTTCAAGGCAAGCAAGATAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS TCA 72 bp ATTGATATATGGCTAGGATTGATAAGTAAGGACCCCTaGTCAGATACATCGACAGAACCATGCAGAGGCATT +
Preference number: 6 (lower is better)
Translates to: IDIWLGLISKDP*SDTSTEPCRGI
Trigger: AATGCCTCTGCATGGTTCTGTCGATGTATCTGATCAGGGGTCCTTACTTATCAATCCTAGCCATATATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp AGATGTCGTATATGTAAATTCAGCTACGGAAACAGGTaGAGAAATGTTAAGAGTTCTCAGCCCATCTGCGTC +
Preference number: 6 (lower is better)
Translates to: RCRICKFSYGNR*RNVKSSQPICV
Trigger: GACGCAGATGGGCTGAGAACTCTTAACATTTCTTCACCTGTTTCCGTAGCTGAATTTACATATACGACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS GCA 72 bp TGGATCTCTTCCTTTCCAGTATATGAGGAAAACACCTaGCTGGAAAACTTGTACTGTTGTTCTCGGAAATTG +
Preference number: 6 (lower is better)
Translates to: WISSFPVYEENT*LENLYCCSRKL
Trigger: CAATTTCCGAGAACAACAGTACAAGTTTTCCAGGCAGGTGTTTTCCTCATATACTGGAAAGGAAGAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 72 bp CACATAGTCATCCTGTGTTGCTTCCAAGATGAAGTCTaGAACGATCAGTTTTTCCTCGTTCGAAAGGCATTT +
Preference number: 6 (lower is better)
Translates to: HIVILCCFQDEV*NDQFFLVRKAF
Trigger: AAATGCCTTTCGAACGAGGAAAAACTGATCGTTCAAGACTTCATCTTGGAAGCAACACAGGATGACTATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp CAACATCACTTCTGGGTGATTCAATCTGAGAAACCATaGACGTTTTATAAAAGACAGCAGACTCACTACCAA +
Preference number: 6 (lower is better)
Translates to: QHHFWVIQSEKP*TFYKRQQTHYQ
Trigger: TTGGTAGTGAGTCTGCTGTCTTTTATAAAACGTCCATGGTTTCTCAGATTGAATCACCCAGAAGTGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 72 bp ATGATCCATTGTAAATGTAATACTTGTCAGTGGAGTTaGGCAGGAGGTTCTGCAAGACGAATGGATCTAAAG +
Preference number: 6 (lower is better)
Translates to: MIHCKCNTCQWS*AGGSARRMDLK
Trigger: CTTTAGATCCATTCGTCTTGCAGAACCTCCTGCCAAACTCCACTGACAAGTATTACATTTACAATGGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 72 bp AAGTTTTCTTCCTCACTGACGTCAGCAGAAACCTCTTaGTACTCTGTTATGGGAACCGTATTTAAGGATTCT +
Preference number: 6 (lower is better)
Translates to: KFSSSLTSAETS*YSVMGTVFKDS
Trigger: AGAATCCTTAAATACGGTTCCCATAACAGAGTACAAAGAGGTTTCTGCTGACGTCAGTGAGGAAGAAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 72 bp TTGCTGAACAAAGATGGCAGCACTTGCTGGGGACTTTaGCTCTTAAGCAAACCTTGTTCAGAAAATTTCTTA +
Preference number: 6 (lower is better)
Translates to: LLNKDGSTCWGL*LLSKPCSENFL
Trigger: TAAGAAATTTTCTGAACAAGGTTTGCTTAAGAGCAAAAGTCCCCAGCAAGTGCTGCCATCTTTGTTCAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CAA 90 bp ATTGGCATTGATGTAATCAGTCAGTTTTCCATCTTTTTCAGCAAGTaGTGTGAGCTTAACCCTGCTATGATCATAGGCTACGATATTGAC +
Preference number: 6 (lower is better)
Translates to: IGIDVISQFSIFFSK*CELNPAMIIGYDID
Trigger: GTCAATATCGTAGCCTATGATCATAGCAGGGTTAAGCTCACACAACTTGCTGAAAAAGATGGAAAACTGACTGATTACATCAATGCCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS TCA 72 bp TTTAAGAAGCCAAATATGTTGACGGTTCCTTCATGTTaGATCTGCTGCAGCATACTGTCTAGCACAATGTAT +
Preference number: 6 (lower is better)
Translates to: FKKPNMLTVPSC*ICCSILSSTMY
Trigger: ATACATTGTGCTAGACAGTATGCTGCAGCAGATTCAACATGAAGGAACCGTCAACATATTTGGCTTCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CCA 72 bp TCTCTTCCTTTCCAGTATATGAGGAAAACACCTGCCTaGAAAACTTGTACTGTTGTTCTCGGAAATTGTTTT +
Preference number: 6 (lower is better)
Translates to: SLPFQYMRKTPA*KTCTVVLGNCF
Trigger: AAAACAATTTCCGAGAACAACAGTACAAGTTTTCCAGGCAGGTGTTTTCCTCATATACTGGAAAGGAAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CCA 72 bp AACATCACTCTTTCCAGAGAATTCAGATCCTCTTGTTaGAGATCGGTTAGTCTTGGCTTCATTGTATTTAGT +
Preference number: 6 (lower is better)
Translates to: NITLSREFRSSC*RSVSLGFIVFS
Trigger: ACTAAATACAATGAAGCCAAGACTAACCGATCTCCAACAAGAGGATCTGAATTCTCTGGAAAGAGTGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS CAA 72 bp CTGTCTCTACCAGGATTCAAGCCAGTGTCTTCTTCATaGTCTTTTCCATATTCTTCCTCCTTGATTATTTCT +
Preference number: 6 (lower is better)
Translates to: LSLPGFKPVSSS*SFPYSSSLIIS
Trigger: AGAAATAATCAAGGAGGAAGAATATGGAAAAGACAATGAAGAAGACACTGGCTTGAATCCTGGTAGAGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
ENSMUST00000202579.4
CDS TCA 72 bp CGAAGAGTATGCATGCATAACAACATCACTTCTGGGTaGTTCAATCTGAGAAACCATGGACGTTTTATAAAA +
Preference number: 6 (lower is better)
Translates to: RRVCMHNNITSG*FNLRNHGRFIK
Trigger: TTTTATAAAACGTCCATGGTTTCTCAGATTGAATCACCCAGAAGTGATGTTGTTATGCATGCATACTCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp TTCAAAACCCTTAGTTGTGGGATAAACAAGAGACTCTaGAAACACACTCTTCATGCTAGAAATAGAAACAGA +
Preference number: 6 (lower is better)
Translates to: FKTLSCGINKRL*KHTLHARNRNR
Trigger: TCTGTTTCTATTTCTAGCATGAAGAGTGTGTTTCCAGAGTCTCTTGTTTATCCCACAACTAAGGGTTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS CCA 72 bp TTCCAGGACACCATCAGTATCCTTTTCATTAACATCTaGAAAACTGAAATCTGTGGACGTCTCATTATCATT +
Preference number: 6 (lower is better)
Translates to: FQDTISILFINI*KTEICGRLIII
Trigger: AATGATAATGAGACGTCCACAGATTTCAGTTTTCCAGATGTTAATGAAAAGGATACTGATGGTGTCCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202579.4
CDS TCA 72 bp CCTTTGGTCTGTTGTAACCATCAACATAATTGGCATTaGTGTAATCAGTCAGTTTTCCATCTTTTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: PLVCCNHQHNWH*CNQSVFHLFQQ
Trigger: TTGCTGAAAAAGATGGAAAACTGACTGATTACATCAATGCCAATTATGTTGATGGTTACAACAGACCAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2
CDS CAA 72 bp GAAAGGCATTTGTGTTCTTCAGACATAAGCGTGACTTaGAAGCTTTCACAATTTATGGGCTCATCTTTATTT +
Preference number: 6 (lower is better)
Translates to: ERHLCSSDISVT*KLSQFMGSSLF
Trigger: AAATAAAGATGAGCCCATAAATTGTGAAAGCTTCAAAGTCACGCTTATGTCTGAAGAACACAAATGCCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000090568.7
ENSMUST00000202102.2