RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056553

Ensembl transcript IDs: ENSMUST00000070733.9, ENSMUST00000190247.7

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTaGAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGC +
Preference number: 1 (lower is better)
Translates to: FHSCRRRHCQQKERE*KAAYPCVNRLSKAS
Trigger: GCTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR GCA 90 bp AACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCC +
Preference number: 1 (lower is better)
Translates to: NCSFVWTMPGLWSLK*SRVAAISISLAPLA
Trigger: GGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR TCA 90 bp TGGGTGTTTCCACACATGTGCTATTTGGTCAATCAGAAGTACACATaGCTAGCCACCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTA +
Preference number: 1 (lower is better)
Translates to: WVFPHMCYLVNQKYT*LATCTDCGARRTLL
Trigger: TAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGGTGGCTAGTCATGTGTACTTCTGATTGACCAAATAGCACATGTGTGGAAACACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR-3UTR GCA 90 bp TGGGGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGAGAGAGTGAAAGGCTaGCTACCCTTGTGTGAACAG +
Preference number: 2 (lower is better)
Translates to: WGPASSSFSAYWGRAFRMERVKG*LPLCEQ
Trigger: CTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTC...CATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR-3UTR TCA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCCTGCCTACCCTTGTGTaGACAGGCTCAGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: HLIENHVNQDVGSTPAGALPTLV*TGSAKP
Trigger: TGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAG...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR-3UTR GCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGCCTTTGTCTGGACCATaGCTGGTCTCTGGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWPLSGP*LVSGPS
Trigger: TGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGG...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR-3UTR GCA 90 bp AGCCACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTTACTACACAGAAGATaGAGGACTGATATCCTGTTG +
Preference number: 2 (lower is better)
Translates to: SHSCQRKLKLLLCLDHAWLLHRR*RTDILL
Trigger: CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA...CCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR CCA 72 bp AGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTaGTGGGGTCCCGCCAGCTCCAGCTTCAGCGCCTAC +
Preference number: 3 (lower is better)
Translates to: RTDILLRFWKHS*WGPASSSFSAY
Trigger: GTAGGCGCTGAAGCTGGAGCTGGCGGGACCCCACCACGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR CCA 72 bp CACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTaGAAGCACTCGTGGTGGGGTCCCGCCAGCTCCAGC +
Preference number: 3 (lower is better)
Translates to: HRRCRTDILLRF*KHSWWGPASSS
Trigger: GCTGGAGCTGGCGGGACCCCACCACGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
3UTR CCA 72 bp CGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTaGTCTCTGGTCCCTCAAGTGCTCCAGGGTCGCTGC +
Preference number: 3 (lower is better)
Translates to: RKLKLLLCLDHA*SLVPQVLQGRC
Trigger: GCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR GCA 72 bp TCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATaGCTGGTCTCTGGTCCCTCAAGTGCTCCAGGGTCG +
Preference number: 3 (lower is better)
Translates to: SAQTQTAPLSGP*LVSGPSSAPGS
Trigger: CGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR CCA 72 bp TCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTaGTCCCTCAAGTGCTCCAGGGTCGCTGCGATATCA +
Preference number: 3 (lower is better)
Translates to: SNCSFVWTMPGL*SLKCSRVAAIS
Trigger: TGATATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR TCA 72 bp AGAAGGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTaGACAGGCTCAGCAAAGCCAGCAGCCAAGTCCTTC +
Preference number: 3 (lower is better)
Translates to: RRRESERLPTLV*TGSAKPAAKSF
Trigger: GAAGGACTTGGCTGCTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR GCA 72 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTaGGGTTCTGGAAGCACTCGTGGTGGGGTCCCGCCA +
Preference number: 3 (lower is better)
Translates to: CYYTEDAGLISC*GSGSTRGGVPP
Trigger: TGGCGGGACCCCACCACGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
3UTR TCA 72 bp CCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTaGTATCCTGTTGCGGTTCTGGAAGCACTCGTGGTG +
Preference number: 3 (lower is better)
Translates to: PKDPVTTQKMQD*YPVAVLEALVV
Trigger: CACCACGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
3UTR GCA 72 bp TTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATATCAATCTCTTTAGCA +
Preference number: 3 (lower is better)
Translates to: FVWTMPGLWSLK*SRVAAISISLA
Trigger: TGCTAAAGAGATTGATATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR TCA 72 bp CCACACATGTGCTATTTGGTCAATCAGAAGTACACATaGCTAGCCACCTGCACTGACTGTGGAGCCCGAAGG +
Preference number: 3 (lower is better)
Translates to: PHMCYLVNQKYT*LATCTDCGARR
Trigger: CCTTCGGGCTCCACAGTCAGTGCAGGTGGCTAGTCATGTGTACTTCTGATTGACCAAATAGCACATGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCATGCGGAAATCCAGGAGTaGCCTCGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPPAPASAPTGEGPSGWHAEIQE*PRGGRD
Trigger: GTCCCTTCCTCCACGAGGTCACTCCTGGATTTCCGC...ATGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGGGGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGAGAGCTTCTGTAAGGTaGCCTTCAGGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: WGPASSSFSAYWGRAFRMRASVR*PSGAAG
Trigger: CCCTGCTGCACCTGAAGGTCACCTTACAGAAGCTCT...CATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGGGGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGTTGGTAGGCGCACAGTaGTTCCCACTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WGPASSSFSAYWGRAFRMLVGAQ*FPLLLQ
Trigger: CTGGAGAAGGAGTGGGAAGCACTGTGCGCCTACCAA...CATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCACCTGGGCTGGGGCTCTaGGTTTGGTTTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GPASSSFSAYWGRAFRMAPGLGL*VWFPFK
Trigger: TTTGAAAGGAAACCAAACTCAGAGCCCCAGCCCAGG...TGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCATTCAAGCCTCCTGGGCTaGGGCTCTGAGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VPPAPASAPTGEGPSGWHSSLLG*GSEFGF
Trigger: GAAACCAAACTCAGAGCCCCAGCCCAGGAGGCTTGA...ATGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCACCAGGGAACGGTTCTTaGGTGCATTCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPASSSFSAYWGRAFRMAPGNGS*VHSPLS
Trigger: AGAGAGAGGAGAATGCACCCAAGAACCGTTCCCTGG...TGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCATGGGATGAGACGCTGTTaGTGCGTGATGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: VPPAPASAPTGEGPSGWHGMRRC*CVMYVV
Trigger: GACCACATACATCACGCATCAACAGCGTCTCATCCC...ATGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp ACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCTGCCTGCATCGGCCCATCGCTaGACTGGGATGAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: TPAGAVTVNRRRESERLPASAHR*TGMRRC
Trigger: ACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGC...AGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGTCCCGCCAGCTCCAGCTTCAGCGCCTACTGGGGAAGGGCCTTCAGGATGGCAAAGGTACCGTGGCTCTaGGTCATTTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPASSSFSAYWGRAFRMAKVPWL*VIFSRK
Trigger: CTTCCTGGAGAAAATGACCCAGAGCCACGGTACCTT...TGCCATCCTGAAGGCCCTTCCCCAGTAGGCGCTGAAGCTGGAGCTGGCGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp ACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCTGCCTGGCGTCTCCAGGAGGTaGAGGCCATCTCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: TPAGAVTVNRRRESERLPGVSRR*RPSLRQ
Trigger: TTGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCC...AGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGGGCAGTAGGCAAGGCTaGAAGCCAGGAGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQGSRQG*KPGEPP
Trigger: TGGGGGTTCTCCTGGCTTCCAGCCTTGCCTACTGCC...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp ACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCTGCCTAGTCATCTTGCCACGTaGAACCTGTACGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPAGAVTVNRRRESERLPSHLAT*NLYGRA
Trigger: AGCTCTCCCGTACAGGTTTCACGTGGCAAGATGACT...AGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGATCTCTGGGCCACAAGTaGGCTGTTGGGCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGSLGHK*AVGLCL
Trigger: CAAGCAGAGCCCAACAGCTCACTTGTGGCCCAGAGA...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGAGGCCTTGGGGAGGTTTaGAAGCTCCTGGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGGLGEV*KLLGNH
Trigger: GTGATTGCCCAGGAGCTTGCAAACCTCCCCAAGGCC...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGGTCCGGCTCCTCACATaGTCCACCCCAGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILVRLLT*STPAVS
Trigger: GGAGACTGCTGGGGTGGAGCATGTGAGGAGCCGGAC...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGGGAGAACCCCCAGGATaGAGGCAATGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQGEPPG*RQWRGR
Trigger: CCTTCCTCTCCATTGCCTGCATCCTGGGGGTTCTCC...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACAGACCAGGATGAAGTaGTGCTCCGAGCCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGQTRMK*CSEPKD
Trigger: GTCCTTCGGCTCGGAGCAGCACTTCATCCTGGTCTG...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGCTGAGCTCATCTGGCTaGAGCCGGCTAAAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILLSSSG*SRLKGR
Trigger: GCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAG...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGCTCGGTTTTGGAACTaGTCCTCAAGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTARFWN*SSSLLG
Trigger: GCCCAGGAGGCTTGAGGATCAGTTCCAAAACCGAGC...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGGCATCGGCCCATCGCTaGACTGGGATGAGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GARRTLLLHRRCRTDILLASAHR*TGMRRC
Trigger: ACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGC...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCCTCCTCAGACCAGGATaGAGTGCTGCTCCGAGCCGA +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCLLRPG*SAAPSR
Trigger: TCGGCTCGGAGCAGCACTTCATCCTGGTCTGAGGAG...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCTCCTCAGACCAGGATaGAGTGCTGCTCCGAGCCGA +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCLLRPG*SAAPSR
Trigger: TCGGCTCGGAGCAGCACTTCATCCTGGTCTGAGGAG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGCGGAAATCCAGGAGTaGCCTCGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCAEIQE*PRGGRD
Trigger: GTCCCTTCCTCCACGAGGTCACTCCTGGATTTCCGC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGGCCTTGGGGAGGTTTaGAAGCTCCTGGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTGLGEV*KLLGNH
Trigger: GTGATTGCCCAGGAGCTTGCAAACCTCCCCAAGGCC...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAGTCCGGCTCCTCACATaGTCCACCCCAGCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGVRLLT*STPAVS
Trigger: GGAGACTGCTGGGGTGGAGCATGTGAGGAGCCGGAC...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTCAGACCAGGATGAAGTaGTGCTCCGAGCCGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTQTRMK*CSEPKD
Trigger: GTCCTTCGGCTCGGAGCAGCACTTCATCCTGGTCTG...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGGGAACTGGGTCACCGTaGGAGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRGTGSP*ESRWSA
Trigger: TGCAGACCAACGAGACTCGCACGGTGACCCAGTTCC...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCTGTTGTAAGGACCTaGCTGGGCCGGACGCTTCCC +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLISVVRT*LGRTLP
Trigger: GGGAAGCGTCCGGCCCAGCCAGGTCCTTACAACAGA...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCGGGGCTGAGCTCATCTaGCTGGAGCCGGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSGAELI*LEPAKG
Trigger: CCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCC...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGGGGGCTGAGCTCATCTaGCTGGAGCCGGCTAAAGGG +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWGAELI*LEPAKG
Trigger: CCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCC...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGCTCCCGTGGCTTTCTTaGCTTCCCTCTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQLPWLS*LPSAGS
Trigger: TGATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAG...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTTCAGCCCCTCTCCCGTaGCTTTCTTGGCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTSAPLP*LSWLPS
Trigger: AGAGGGAAGCCAAGAAAGCCACGGGAGAGGGGCTGA...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGGATCCTCAAGCCTCCTaGGCTGGGGCTCTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRDPQAS*AGALSL
Trigger: CAAACTCAGAGCCCCAGCCCAGGAGGCTTGAGGATC...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCCCTGGTAGGCTTCAGTaGCATCTGCACTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLIENHVNQDVGSTPAGAPGRLQ*HLHWGQ
Trigger: CTGACCCCAGTGCAGATGCCACTGAAGCCTACCAGG...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
3UTR CAA 72 bp CTGTTACTACACAGAAGATGCAGGACTGATATCCTGTaGCGGTTCTGGAAGCACTCGTGGTGGGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LLLHRRCRTDIL*RFWKHSWWGPA
Trigger: GGCGGGACCCCACCACGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGAAGCAGTCTCCTCTTCTaGAGACAAGACCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGSSLLF*RQDLLW
Trigger: CCAGAGGAGGTCTTGTCTTCAGAAGAGGAGACTGCT...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATAGGAGAACCCCCAGGATaGAGGCAATGGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIGEPPG*RQWRGR
Trigger: CCTTCCTCTCCATTGCCTGCATCCTGGGGGTTCTCC...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCTTTCCCACACCATCTaGCAGAAGTCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: GARRTLLLHRRCRTDILLLSHTI*QKSATV
Trigger: CACGGTGGCCGACTTCTGGCAGATGGTGTGGGAAAG...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCCTCTGGTCCCTCAAGTaGTCCAGGGTCGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCLWSLK*SRVAAI
Trigger: TATCGCAGCGACCCTGGAGCACTTGAGGGACCAGAG...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTAGCGCCGAAGGGTCTTaGCCAGGGCCACCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTSAEGS*PGPPPS
Trigger: AGAGGGAGGTGGCCCTGGCCAAGACCCTTCGGCGCT...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCTGAGCTCATCTGGCTaGAGCCGGCTAAAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSLSSSG*SRLKGR
Trigger: GCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATAGGCGTCTCCAGGAGGTaGAGGCCATCTCTGAGACAA +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIGVSRR*RPSLRQ
Trigger: TTGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCC...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTACTCGGGGAGTCTTTaGCGTCTCCAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILYSGSL*RLQEVE
Trigger: CTCCACCTCCTGGAGACGCCAAAGACTCCCCGAGTA...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp ACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCTGCCTCAGGATCACTTTGTATaGCTCCAGCAACTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TPAGAVTVNRRRESERLPQDHFV*LQQLSL
Trigger: CAGACTCAGTTGCTGGAGCCATACAAAGTGATCCTG...AGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTCTCCCGTGGCTTTCTTaGCTTCCCTCTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTLPWLS*LPSAGS
Trigger: TGATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAG...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTGATCCTCAAGCCTCCTaGGCTGGGGCTCTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCDPQAS*AGALSL
Trigger: CAAACTCAGAGCCCCAGCCCAGGAGGCTTGAGGATC...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAGGCAGTAGGCAAGGCTaGAAGCCAGGAGAACCCCCA +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGGSRQG*KPGEPP
Trigger: TGGGGGTTCTCCTGGCTTCCAGCCTTGCCTACTGCC...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCCAGTGGCATCTGCACTaGGGTCAGCGCCTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSQWHLH*GQRLVQ
Trigger: CTGGACTAGGCGCTGACCCCAGTGCAGATGCCACTG...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCAATGTCCATGTTGGACTaGACAGGCTCCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: AQTQTAPLSGPCLVSGPSMSMLD*TGSSDQ
Trigger: CTGGTCTGAGGAGCCTGTCCAGTCCAACATGGACAT...TGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCAAGTGCCACAAGTGAGCTGTTaGGCTCTGCTTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: KLKLLLCLDHAWSLVPQVPQVSC*ALLGRR
Trigger: GCGCCTACCAAGCAGAGCCCAACAGCTCACTTGTGG...CACTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGCACACAGGTCTCCAGTaGTCCACACAAGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILHTGLQ*STQAIL
Trigger: GAGGATGGCTTGTGTGGATCACTGGAGACCTGTGTG...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCAGCAGTCTCCTCTTCTaGAGACAAGACCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLIENHVNQDVGSTPAGASSLLF*RQDLLW
Trigger: CCAGAGGAGGTCTTGTCTTCAGAAGAGGAGACTGCT...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGTGTTGGCACTTACTTTaGAGGTCACTGCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQCWHLL*RSLLVP
Trigger: TGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACA...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCATACTTGGCCCGGGTTaGAGGAGGATAGGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCILGPG*RRIGQC
Trigger: GCACTGACCTATCCTCCTGCAACCCGGGCCAAGTAT...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTTGTTCCTCAGAAGGCTaGACTTCCAGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTCSSEG*TSSCRP
Trigger: AGGCCTACAGCTGGAAGTGCAGCCTTCTGAGGAACA...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp AGCCACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGACTTGGTCCATCAGCTaGTTCCCCTTCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SHSCQRKLKLLLCLDHAWTWSIS*FPFSGL
Trigger: AAGTCCAGAGAAGGGGAAGCAGCTGATGGACCAAGT...CCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGGTAGGCGCACAGTaGTTCCCACTCCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILLVGAQ*FPLLLQ
Trigger: CTGGAGAAGGAGTGGGAAGCACTGTGCGCCTACCAA...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGCCATAGGTAGGCCTTaGGGAGGTTTGCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCAIGRP*GGLQAP
Trigger: AGGAGCTTGCAAACCTCCCCAAGGCCTACCTATGGC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGATACTCGGGGAGTCTTTaGCGTCTCCAGGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGYSGSL*RLQEVE
Trigger: CTCCACCTCCTGGAGACGCCAAAGACTCCCCGAGTA...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCATCTGTCTGCTCTCTTaGCTGTCCTTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: HLIENHVNQDVGSTPAGAICLLS*LSFSPS
Trigger: AGAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGAT...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCAAGCCTCCTGGGCTaGGGCTCTGAGTTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLISSLLG*GSEFGF
Trigger: GAAACCAAACTCAGAGCCCCAGCCCAGGAGGCTTGA...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCAGTGGCATCTGCACTaGGGTCAGCGCCTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSQWHLH*GQRLVQ
Trigger: CTGGACTAGGCGCTGACCCCAGTGCAGATGCCACTG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGCCCATCGCTGAACTaGGATGAGACGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCGPSLN*DETLLM
Trigger: CATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGATGTCCATGTTGGACTaGACAGGCTCCTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRMSMLD*TGSSDQ
Trigger: CTGGTCTGAGGAGCCTGTCCAGTCCAACATGGACAT...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp ACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCAGACATGGTAGAGGTTaGAGCCTTCATCGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TAVSANSNCSFVWTMPGLRHGRG*SLHRAS
Trigger: ACTGGCCCGATGAAGGCTCCAACCTCTACCATGTCT...GAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTCACCAGGAAATCCTaGCACCATATGTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGLTRKS*HHMCSE
Trigger: CTCTGAGCACATATGGTGCCAGGATTTCCTGGTGAG...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGAGGAAGGGACTCCCTaGTCATACCAACTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTEEGTP*SYQLRK
Trigger: CTTCCTGAGTTGGTATGACCAGGGAGTCCCTTCCTC...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGCGCCGTCACTGCAATaGACAATGATCGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTAPSLQ*TMIGQE
Trigger: CTCTTGTCCGATCATTGTCCATTGCAGTGACGGCGC...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR TCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGAGACAAAGCAGTTGCTaGGAATGGCCTTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRRQSSC*EWPWCS
Trigger: AGAGCACCAAGGCCATTCTCAGCAACTGCTTTGTCT...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCGGTGGAGGCCATCTCTaGGACAAAGCAGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSGGGHL*DKAVAE
Trigger: CTCAGCAACTGCTTTGTCTCAGAGATGGCCTCCACC...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCCCTGTGCTGCCAATTTaGGGCTTTCTTCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCPVLPI*GFLHPP
Trigger: GGGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGG...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTGTTGGCACTTACTTTaGAGGTCACTGCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRCWHLL*RSLLVP
Trigger: TGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACA...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTTCTCTGGGCCACAAGTaGGCTGTTGGGCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSSLGHK*AVGLCL
Trigger: CAAGCAGAGCCCAACAGCTCACTTGTGGCCCAGAGA...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTAAGGTGACCTTCAGGTaGAGCAGGGCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSKVTFR*SRAPGG
Trigger: ACCACCAGGAGCCCTGCTGCACCTGAAGGTCACCTT...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGATTCTTGGCTTCCCTCTaGAGGATCACTTTGTATGGC +
Preference number: 4 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGFLASL*RITLYG
Trigger: GCCATACAAAGTGATCCTGCAGAGGGAAGCCAAGAA...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATAAGGGGGTCCCTGTGCTaGCAATTTGAGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIRGSLC*QFEAFF
Trigger: GAAGAAAGCCTCAAATTGGCAGCACAGGGACCCCCT...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATTGTTCCTCAGAAGGCTaGACTTCCAGCTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDCSSEG*TSSCRP
Trigger: AGGCCTACAGCTGGAAGTGCAGCCTTCTGAGGAACA...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCAGCATGACAATGACTaGACAGCCGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCQHDND*TAAFPH
Trigger: GTGTGGGAAAGCGGCTGTGCAGTCATTGTCATGCTG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAACTGGGTCACCGTaGGAGTCTCGTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSGTGSP*ESRWSA
Trigger: TGCAGACCAACGAGACTCGCACGGTGACCCAGTTCC...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCCCTTTGTCTGGACCATaGCTGGTCTCTGGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSPLSGP*LVSGPS
Trigger: TGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGG...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGGCCATAGGTAGGCCTTaGGGAGGTTTGCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWAIGRP*GGLQAP
Trigger: AGGAGCTTGCAAACCTCCCCAAGGCCTACCTATGGC...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGCCACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTTGAAGCATTGTCTCTaGGGCATCTGTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SHSCQRKLKLLLCLDHAWLKHCL*GICLLS
Trigger: AGAGAGCAGACAGATGCCCCAGAGACAATGCTTCAA...CCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCGGCCCATCGCTGAACTaGGATGAGACGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RRTLLLHRRCRTDILLRFGPSLN*DETLLM
Trigger: CATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCC...GAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCCACAAGTGAGCTGTTaGGCTCTGCTTGGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSPQVSC*ALLGRR
Trigger: GCGCCTACCAAGCAGAGCCCAACAGCTCACTTGTGG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGCATTCTCCTCTCTCTaGGCCACAAGTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCAFSSL*ATSELL
Trigger: CAACAGCTCACTTGTGGCCCAGAGAGAGGAGAATGC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCCAGGGAACGGTTCTTaGGTGCATTCTCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCPGNGS*VHSPLS
Trigger: AGAGAGAGGAGAATGCACCCAAGAACCGTTCCCTGG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTAACTGCTCCTTTGTCTaGACCATGCCTGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCNCSFV*TMPGLW
Trigger: CCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTT...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp CGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCGAAGGGCCTTCAGGATaGCATTCACCTCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRTLLLHRRCRTDILLRFEGPSG*HSPPQP
Trigger: TGGCTGAGGAGGTGAATGCCATCCTGAAGGCCCTTC...GAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp ACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCCAAGTGGGGCTGCAATaGACAATGATCGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: TAVSANSNCSFVWTMPGLQVGLQ*TMIGQE
Trigger: CTCTTGTCCGATCATTGTCCATTGCAGCCCCACTTG...GAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTAGAGCTTCTGTAAGGTaGCCTTCAGGTGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSRASVR*PSGAAG
Trigger: CCCTGCTGCACCTGAAGGTCACCTTACAGAAGCTCT...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGTCATCTTGCCACGTaGAACCTGTACGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGSHLAT*NLYGRA
Trigger: AGCTCTCCCGTACAGGTTTCACGTGGCAAGATGACT...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGAGACAAAGCAGTTGCTaGGAATGGCCTTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GARRTLLLHRRCRTDILLRQSSC*EWPWCS
Trigger: AGAGCACCAAGGCCATTCTCAGCAACTGCTTTGTCT...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGTGGAGGCCATCTCTaGGACAAAGCAGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSGGGHL*DKAVAE
Trigger: CTCAGCAACTGCTTTGTCTCAGAGATGGCCTCCACC...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGTATGGCTCCAGCAACTaGGTCTGCTTTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GARRTLLLHRRCRTDILLYGSSN*VCFLLL
Trigger: AAGGAGGAGAAAGCAGACTCAGTTGCTGGAGCCATA...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTGCTCGGTTTTGGAACTaGTCCTCAAGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTARFWN*SSSLLG
Trigger: GCCCAGGAGGCTTGAGGATCAGTTCCAAAACCGAGC...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGACCTGTGCTGCCAATTTaGGGCTTTCTTCATCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGPVLPI*GFLHPP
Trigger: GGGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGG...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCTGCCATGGCTGTTTTaGGACTTCAACAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: GARRTLLLHRRCRTDILLLPWLF*DFNRIL
Trigger: CAGGATCCTGTTGAAGTCTCAAAACAGCCATGGCAG...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATCTGCCATGGCTGTTTTaGGACTTCAACAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDLPWLF*DFNRIL
Trigger: CAGGATCCTGTTGAAGTCTCAAAACAGCCATGGCAG...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCCATCTTATTGAGAACAAGGTGACCTTCAGGTaGAGCAGGGCTCCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGRCDINLFSTFGHLIENKVTFR*SRAPGG
Trigger: ACCACCAGGAGCCCTGCTGCACCTGAAGGTCACCTT...GTTCTCAATAAGATGGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCATCCACTTCAGAGTTCTaGTGCAAATCCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AQTQTAPLSGPCLVSGPSSTSEF*CKSFRR
Trigger: TCTCCTGAAGGATTTGCAGCAGAACTCTGAAGTGGA...TGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCTTCCTTCCATCCTAACTGGGTGTTTCCACACATGTGCTATTTGGTCAATCAGCTTTCCCACACCATCTaGCAGAAGTCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: PSFHPNWVFPHMCYLVNQLSHTI*QKSATV
Trigger: CACGGTGGCCGACTTCTGGCAGATGGTGTGGGAAAG...CTGATTGACCAAATAGCACATGTGTGGAAACACCCAGTTAGGATGGAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGTGCTCCAGGGTCGCTaGGATATCAATCTCTTTAGC +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCVLQGR*DINLFS
Trigger: GCTAAAGAGATTGATATCGCAGCGACCCTGGAGCAC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp TTTAGCACCTTTGGCCATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCTCTGTTGTAAGGACCTaGCTGGGCCGGACGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FSTFGHLIENHVNQDVGSSVVRT*LGRTLP
Trigger: GGGAAGCGTCCGGCCCAGCCAGGTCCTTACAACAGA...GGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATGGCCAAAGGTGCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGGTGTGCATTTGCTGTTaGGGTCTGGGACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWVCICC*GLGQKL
Trigger: GAGCTTCTGTCCCAGACCCCAACAGCAAATGCACAC...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGAAGGTACCGTGGCTCTaGGTCATTTTCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILKVPWL*VIFSRK
Trigger: CTTCCTGGAGAAAATGACCCAGAGCCACGGTACCTT...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGATGTACAAGGTACCGTaGCTCTGGGTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRMYKVP*LWVIFS
Trigger: GGAGAAAATGACCCAGAGCCACGGTACCTTGTACAT...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAATCTGTCTGCTCTCTTaGCTGTCCTTCAGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGICLLS*LSFSPS
Trigger: AGAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGAT...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp ACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTATCTGCAAAGAAGCTaGAAGGTACCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: TAVSANSNCSFVWTMPGLYLQRS*KVPGGC
Trigger: ACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATA...GAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCCTGGTAGGCTTCAGTaGCATCTGCACTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTPGRLQ*HLHWGQ
Trigger: CTGACCCCAGTGCAGATGCCACTGAAGCCTACCAGG...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCGCATTCTCCTCTCTCTaGGCCACAAGTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSAFSSL*ATSELL
Trigger: CAACAGCTCACTTGTGGCCCAGAGAGAGGAGAATGC...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGTACCAACTCAGGAAGTaGAACTGGGTCACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWYQLRK*NWVTVR
Trigger: TCGCACGGTGACCCAGTTCCACTTCCTGAGTTGGTA...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCGAGGAAGGGACTCCCTaGTCATACCAACTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRTLLLHRRCRTDILLRFEEGTP*SYQLRK
Trigger: CTTCCTGAGTTGGTATGACCAGGGAGTCCCTTCCTC...GAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTACCATGCCTGGTCTCTaGTCCCTCAAGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTTMPGL*SLKCSR
Trigger: CCTGGAGCACTTGAGGGACCAGAGACCAGGCATGGT...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTGTCTGGACCATGCCTaGTCTCTGGTCCCTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSCLDHA*SLVPQV
Trigger: CACTTGAGGGACCAGAGACCAGGCATGGTCCAGACA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR TCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCCCTCCCTCTCCAGACTaGACCATTTTTCATTGTCAG +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCPPSPD*TIFHCQ
Trigger: CTGACAATGAAAAATGGTTCAGTCTGGAGAGGGAGG...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCCTCCTCTGGCTGCTCTaGTTTCTTAATCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HLIENHVNQDVGSTPAGALLWLL*FLNLFS
Trigger: AGAGAAGAGATTAAGAAATCAGAGCAGCCAGAGGAG...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCCTGGGCTGGGGCTCTaGGTTTGGTTTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSPGLGL*VWFPFK
Trigger: TTTGAAAGGAAACCAAACTCAGAGCCCCAGCCCAGG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCAGTGTAGGCGCCCAGTaGTGCAATCAGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSSVGAQ*CNQLLF
Trigger: AAACAGAAGCTGATTGCAGCACTGGGCGCCTACACT...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGTGTAGGCGCCCAGTaGTGCAATCAGCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGSVGAQ*CNQLLF
Trigger: AAACAGAAGCTGATTGCAGCACTGGGCGCCTACACT...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGACTTCAGAGTTCTGCTaGAAATCCTTCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRTSEFC*KSFRRL
Trigger: GAGTCTCCTGAAGGATTTGCAGCAGAACTCTGAAGT...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGAGGGGGTCCCTGTGCTaGCAATTTGAGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSRGSLC*QFEAFF
Trigger: GAAGAAAGCCTCAAATTGGCAGCACAGGGACCCCCT...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTTGGTCCATCAGCTaGTTCCCCTTCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSTWSIS*FPFSGL
Trigger: AAGTCCAGAGAAGGGGAAGCAGCTGATGGACCAAGT...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGCAGCATGACAATGACTaGACAGCCGCTTTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSQHDND*TAAFPH
Trigger: GTGTGGGAAAGCGGCTGTGCAGTCATTGTCATGCTG...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCAGCGCAAACTCAAACTaGTCCTTTGTCTGGACCATG +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCSANSN*SFVWTM
Trigger: CATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCT...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS-3UTR CCA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCATGTACAAGGTACCGTaGCTCTGGGTCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCMYKVP*LWVIFS
Trigger: GGAGAAAATGACCCAGAGCCACGGTACCTTGTACAT...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGCCACAGCTGTCAGCGCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTTTCAAATAGGTCTTTaGAGTAAGTCCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHSCQRKLKLLLCLDHAWFQIGL*SKSGSS
Trigger: TGAGGAGCCGGACTTACTCCAAAGACCTATTTGAAA...CCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGCGCTGACAGCTGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGGTTGCCTTCTCCAGCTaGTCTTTGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWVAFSS*SLLSAA
Trigger: TGCAGCTGACAACAAAGACCAGCTGGAGAAGGCAAC...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTAGACATGGTAGAGGTTaGAGCCTTCATCGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSRHGRG*SLHRAS
Trigger: ACTGGCCCGATGAAGGCTCCAACCTCTACCATGTCT...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTACCAACTCAGGAAGTaGAACTGGGTCACCGTGCGA +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSYQLRK*NWVTVR
Trigger: TCGCACGGTGACCCAGTTCCACTTCCTGAGTTGGTA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATAATCACCGGAACCTTTTaGCATCTTCCAAACACACCA +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIITGTF*HLPNTP
Trigger: TGGTGTGTTTGGAAGATGTCAAAAGGTTCCGGTGAT...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCTGGTCCCAAAACTTTaGTATCTGCAAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCLVPKL*YLQRSW
Trigger: CCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGCTGGTCCCAAAACTTTaGTATCTGCAAAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CGARRTLLLHRRCRTDILLVPKL*YLQRSW
Trigger: CCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAG...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTGGGATGAGACGCTGTTaGTGCGTGATGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTGMRRC*CVMYVV
Trigger: GACCACATACATCACGCATCAACAGCGTCTCATCCC...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTCCTTCAGGAGACTCTaGAGGAGTGTGTCATCATCC +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSSFRRL*RSVSSS
Trigger: GGATGATGACACACTCCTGCAGAGTCTCCTGAAGGA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCTTCTTGGCTTCCCTCTaGAGGATCACTTTGTATGGC +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSFLASL*RITLYG
Trigger: GCCATACAAAGTGATCCTGCAGAGGGAAGCCAAGAA...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGTACTTTGAAGGTCACTaGTGGTCCCAAAACTTTGAT +
Preference number: 4 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQYFEGH*WSQNFD
Trigger: ATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTA...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTGTGTGCATTTGCTGTTaGGGTCTGGGACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTVCICC*GLGQKL
Trigger: GAGCTTCTGTCCCAGACCCCAACAGCAAATGCACAC...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGTATCTGCAAAGAAGCTaGAAGGTACCCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWYLQRS*KVPGGC
Trigger: ACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATA...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCATCACCGGAACCTTTTaGCATCTTCCAAACACACCA +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSITGTF*HLPNTP
Trigger: TGGTGTGTTTGGAAGATGTCAAAAGGTTCCGGTGAT...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGCCTCCCTCTCCAGACTaGACCATTTTTCATTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSPPSPD*TIFHCQ
Trigger: CTGACAATGAAAAATGGTTCAGTCTGGAGAGGGAGG...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp CAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCCATCTTATTGAGAACTATGGCTCCAGCAACTaGGTCTGCTTTCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QGRCDINLFSTFGHLIENYGSSN*VCFLLL
Trigger: AAGGAGGAGAAAGCAGACTCAGTTGCTGGAGCCATA...GTTCTCAATAAGATGGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR TCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGCTCCTCTGGCTGCTCTaGTTTCTTAATCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWLLWLL*FLNLFS
Trigger: AGAGAAGAGATTAAGAAATCAGAGCAGCCAGAGGAG...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAACTTCAGAGTTCTGCTaGAAATCCTTCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGTSEFC*KSFRRL
Trigger: GAGTCTCCTGAAGGATTTGCAGCAGAACTCTGAAGT...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGTCCACTTCAGAGTTCTaGTGCAAATCCTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWSTSEF*CKSFRR
Trigger: TCTCCTGAAGGATTTGCAGCAGAACTCTGAAGTGGA...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATTTGTTCACTTTTCTaGGGAAATCCAGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDICSLF*GNPGVT
Trigger: GGTCACTCCTGGATTTCCGCAGAAAAGTGAACAAAT...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCAGGATCACTTTGTATaGCTCCAGCAACTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSQDHFV*LQQLSL
Trigger: CAGACTCAGTTGCTGGAGCCATACAAAGTGATCCTG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTTGAAGCATTGTCTCTaGGGCATCTGTCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSLKHCL*GICLLS
Trigger: AGAGAGCAGACAGATGCCCCAGAGACAATGCTTCAA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCTTCCTTCCATCCTAACTGGGTGTTTCCACACATGTGCTATTTGGTCAATCAGGTTGCCTTCTCCAGCTaGTCTTTGTTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PSFHPNWVFPHMCYLVNQVAFSS*SLLSAA
Trigger: TGCAGCTGACAACAAAGACCAGCTGGAGAAGGCAAC...CTGATTGACCAAATAGCACATGTGTGGAAACACCCAGTTAGGATGGAAGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp CCTTCCTTCCATCCTAACTGGGTGTTTCCACACATGTGCTATTTGGTCAATCAGCTCACCAGGAAATCCTaGCACCATATGTGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PSFHPNWVFPHMCYLVNQLTRKS*HHMCSE
Trigger: CTCTGAGCACATATGGTGCCAGGATTTCCTGGTGAG...CTGATTGACCAAATAGCACATGTGTGGAAACACCCAGTTAGGATGGAAGGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCATTTGTTCACTTTTCTaGGGAAATCCAGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSICSLF*GNPGVT
Trigger: GGTCACTCCTGGATTTCCGCAGAAAAGTGAACAAAT...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATACAAAACTTTGATATCTaGAAAGAAGCTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIQNFDI*KEAGRY
Trigger: GTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTTG...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCTACTTTGAAGGTCACTaGTGGTCCCAAAACTTTGAT +
Preference number: 4 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSYFEGH*WSQNFD
Trigger: ATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTA...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGATTTGAAGGTCACTGCTaGTCCCAAAACTTTGATATC +
Preference number: 4 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGFEGHC*SQNFDI
Trigger: GATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAA...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTTTTCAAATAGGTCTTTaGAGTAAGTCCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTFQIGL*SKSGSS
Trigger: TGAGGAGCCGGACTTACTCCAAAGACCTATTTGAAA...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGGCAGTTGTCATGTTTTaGATGTTGGCACTTACTTTG +
Preference number: 4 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSAVVMF*MLALTL
Trigger: CAAAGTAAGTGCCAACATCCAAAACATGACAACTGC...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGCAGTTGTCATGTTTTaGATGTTGGCACTTACTTTG +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSAVVMF*MLALTL
Trigger: CAAAGTAAGTGCCAACATCCAAAACATGACAACTGC...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR GCA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCAAAACTTTGATATCTaGAAAGAAGCTGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSQNFDI*KEAGRY
Trigger: GTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTTG...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CCA 90 bp TTTAGCACCTTTGGCCATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCTTTGAAGGTCACTGCTaGTCCCAAAACTTTGATATC +
Preference number: 4 (lower is better)
Translates to: FSTFGHLIENHVNQDVGSFEGHC*SQNFDI
Trigger: GATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAA...GGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATGGCCAAAGGTGCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS GCA 90 bp GAAGTCGGCCACCGTGGCGGGAAGTGGGCCTTGGGTGGCAATGTATaGGGGGTTTCGTGGGTCATGGTCCATAATGGGGCTGGCATTGAT +
Preference number: 5 (lower is better)
Translates to: EVGHRGGKWALGGNV*GVSWVMVHNGAGID
Trigger: ATCAATGCCAGCCCCATTATGGACCATGACCCACGAAACCCCGCATACATTGCCACCCAAGGCCCACTTCCCGCCACGGTGGCCGACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TGGCCTTGGTGCTCTCGCGGAACCATGTACAAGGTACCGTGGCTCTaGGTCATTTTCTCCAGGAAGCCTCTGAGCAGTGTAGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: WPWCSRGTMYKVPWL*VIFSRKPLSSVGAQ
Trigger: CTGGGCGCCTACACTGCTCAGAGGCTTCCTGGAGAAAATGACCCAGAGCCACGGTACCTTGTACATGGTTCCGCGAGAGCACCAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp GTGCTGCTCCGAGCCGAAGGACTAGGCATCGGCCCATCGCTGAACTaGGATGAGACGCTGTTGATGCGTGATGTATGTGGTCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VLLRAEGLGIGPSLN*DETLLMRDVCGPSE
Trigger: CTCTGAGGGACCACATACATCACGCATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGCCTAGTCCTTCGGCTCGGAGCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp GGCGTCTCCAGGAGGTGGAGGCCATCTCTGAGACAAAGCAGTTGCTaGGAATGGCCTTGGTGCTCTCGCGGAACCATGTACAAGGTACCG +
Preference number: 5 (lower is better)
Translates to: GVSRRWRPSLRQSSC*EWPWCSRGTMYKVP
Trigger: CGGTACCTTGTACATGGTTCCGCGAGAGCACCAAGGCCATTCTCAGCAACTGCTTTGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp GGATCCTGGAGTGGTCATAGGTCAGCACAGCCAGGGAACGGTTCTTaGGTGCATTCTCCTCTCTCTGGGCCACAAGTGAGCTGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: GSWSGHRSAQPGNGS*VHSPLSGPQVSCWA
Trigger: AGCCCAACAGCTCACTTGTGGCCCAGAGAGAGGAGAATGCACCCAAGAACCGTTCCCTGGCTGTGCTGACCTATGACCACTCCAGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp CGTGGCGGGAAGTGGGCCTTGGGTGGCAATGTATGCGGGGTTTCGTaGGTCATGGTCCATAATGGGGCTGGCATTGATGTAGTCGGAACT +
Preference number: 5 (lower is better)
Translates to: RGGKWALGGNVCGVS*VMVHNGAGIDVVGT
Trigger: AGTTCCGACTACATCAATGCCAGCCCCATTATGGACCATGACCCACGAAACCCCGCATACATTGCCACCCAAGGCCCACTTCCCGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp ACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCTGCCTTGGAAGCTCAGACGGTaGACCTCCTTGTACACTGGG +
Preference number: 5 (lower is better)
Translates to: TPAGAVTVNRRRESERLPWKLRR*TSLYTG
Trigger: CCCAGTGTACAAGGAGGTCAACCGTCTGAGCTTCCA...AGGCAGCCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGAGCTGTTGGGCTCTGCTaGGTAGGCGCACAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGAVGLC*VGAQCF
Trigger: GAAGCACTGTGCGCCTACCAAGCAGAGCCCAACAGC...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp ATACTCGGGGAGTCTTTGGCGTCTCCAGGAGGTGGAGGCCATCTCTaGGACAAAGCAGTTGCTGAGAATGGCCTTGGTGCTCTCGCGGAA +
Preference number: 5 (lower is better)
Translates to: ILGESLASPGGGGHL*DKAVAENGLGALAE
Trigger: TTCCGCGAGAGCACCAAGGCCATTCTCAGCAACTGCTTTGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCCAAAGACTCCCCGAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp GGACGTAGGTTCCACTCCTGCCGGCGCCGTCACTGCAATGGACAATaGTCGGACAAGAGCGGCCTCGGTAGCATTTGTTCACTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GRRFHSCRRRHCNGQ*SDKSGLGSICSLFC
Trigger: GCAGAAAAGTGAACAAATGCTACCGAGGCCGCTCTTGTCCGATCATTGTCCATTGCAGTGACGGCGCCGGCAGGAGTGGAACCTACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS CCA 90 bp GTCTGCTCTCTTGGCTGTCCTTCAGCCCCTCTCCCGTGGCTTTCTTaGCTTCCCTCTGCAGGATCACTTTGTATGGCTCCAGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: VCSLGCPSAPLPWLS*LPSAGSLCMAPATE
Trigger: CTCAGTTGCTGGAGCCATACAAAGTGATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAGAGGGGCTGAAGGACAGCCAAGAGAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TACGCTGGCGGCATAGCTCCTGGTAGGCTTCAGTGGCATCTGCACTaGGGTCAGCGCCTAGTCCAGACAACTTGTCCTTCAGCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: YAGGIAPGRLQWHLH*GQRLVQTTCPSACS
Trigger: ACTACAAGCTGAAGGACAAGTTGTCTGGACTAGGCGCTGACCCCAGTGCAGATGCCACTGAAGCCTACCAGGAGCTATGCCGCCAGCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCACTCCTGCCGGCGCCGCTGTTGGGCTCTGCTaGGTAGGCGCACAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: HLIENHVNQDVGSTPAGAAVGLC*VGAQCF
Trigger: GAAGCACTGTGCGCCTACCAAGCAGAGCCCAACAGC...GGCGCCGGCAGGAGTGGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS TCA 90 bp GTTATCAGGATACTTGGCCCGGGTTGCAGGAGGATAGGTCAGTGCTaGTGTGTGGGCCACGTAGGTCAGGATGTTCTCAGGGGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: VIRILGPGCRRIGQC*CVGHVGQDVLRGRV
Trigger: GACTCTTCCCCTGAGAACATCCTGACCTACGTGGCCCACACATCAGCACTGACCTATCCTCCTGCAACCCGGGCCAAGTATCCTGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TGTTTGTCTATGTCACCGTCTACCTTGGGGCTGAGCTCATCTGGCTaGAGCCGGCTAAAGGGCCGCAGAAGGTTATCAGGATACTTGGCC +
Preference number: 5 (lower is better)
Translates to: CLSMSPSTLGLSSSG*SRLKGRRRLSGYLA
Trigger: GGCCAAGTATCCTGATAACCTTCTGCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACATAGACAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp GGAGACTCTGCAGGAGTGTGTCATCATCCATACTCGGGGAGTCTTTaGCGTCTCCAGGAGGTGGAGGCCATCTCTGAGACAAAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GDSAGVCHHPYSGSL*RLQEVEAISETKQL
Trigger: CAACTGCTTTGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCCAAAGACTCCCCGAGTATGGATGATGACACACTCCTGCAGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TCTGTGATCTTGAAGCATTGTCTCTGGGGCATCTGTCTGCTCTCTTaGCTGTCCTTCAGCCCCTCTCCCGTGGCTTTCTTGGCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: SVILKHCLWGICLLS*LSFSPSPVAFLASL
Trigger: GAGGGAAGCCAAGAAAGCCACGGGAGAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGATGCCCCAGAGACAATGCTTCAAGATCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TCCCTGTGCTGCCAATTTGAGGCTTTCTTCATCCTCCCACAACTCTaGAGCTCGGTTTTGGAACTGATCCTCAAGCCTCCTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLCCQFEAFFILPQL*SSVLELILKPPGLG
Trigger: CCCCAGCCCAGGAGGCTTGAGGATCAGTTCCAAAACCGAGCTCCAGAGTTGTGGGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGACCGTGCGAGTCTCGTaGGTCTGCAGGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRTVRVS*VCRFFR
Trigger: CCTGAAGAACCTGCAGACCAACGAGACTCGCACGGT...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp GCGGCCTCGGTAGCATTTGTTCACTTTTCTGCGGAAATCCAGGAGTaGCCTCGTGGAGGAAGGGACTCCCTGGTCATACCAACTCAGGAA +
Preference number: 5 (lower is better)
Translates to: AASVAFVHFSAEIQE*PRGGRDSLVIPTQE
Trigger: TTCCTGAGTTGGTATGACCAGGGAGTCCCTTCCTCCACGAGGTCACTCCTGGATTTCCGCAGAAAAGTGAACAAATGCTACCGAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TCCTGGGCTGGGGCTCTGAGTTTGGTTTCCTTTCAAATAGGTCTTTaGAGTAAGTCCGGCTCCTCACATGCTCCACCCCAGCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: SWAGALSLVSFQIGL*SKSGSSHAPPQQSP
Trigger: AGGAGACTGCTGGGGTGGAGCATGTGAGGAGCCGGACTTACTCCAAAGACCTATTTGAAAGGAAACCAAACTCAGAGCCCCAGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GGTTCCACTCCTGCCGGCGCCGTCACTGTCAACAGAAGGAGAGAGAGTGAAAGGCATCACCGGAACCTTTaGACATCTTCCAAACACACC +
Preference number: 5 (lower is better)
Translates to: GSTPAGAVTVNRRRESERHHRNL*TSSKHT
Trigger: GGTGTGTTTGGAAGATGTCAAAAGGTTCCGGTGATG...CCTTTCACTCTCTCTCCTTCTGTTGACAGTGACGGCGCCGGCAGGAGTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTATGTCACCGTCTACCTaGGGGCTGAGCTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCMSPST*GLSSSG
Trigger: GCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACAT...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp ACAGAAGGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAATGTCACCGTCTACCTaGGGGCTGAGCTCATCTGGC +
Preference number: 5 (lower is better)
Translates to: TEGERVKGCLPLCEQAQQMSPST*GLSSSG
Trigger: GCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACAT...TTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCTCTCCCGTGGCTTTCTaGGCTTCCCTCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCSPVAF*ASLCRI
Trigger: GATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAGA...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATCATCTGTCTGCTCTCTaGGCTGTCCTTCAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDHLSAL*AVLQPL
Trigger: GAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGATG...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCATCTGTCTGCTCTCTaGGCTGTCCTTCAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCHLSAL*AVLQPL
Trigger: GAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGATG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp CTTTTGACATCTTCCAAACACACCATCGTTCACACAGGTCTCCAGTaGTCCACACAAGCCATCCTCAAACAAGCATCCCAGGCGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LLTSSKHTIVHTGLQ*STQAILKQASQAPR
Trigger: CCGGGGCGCCTGGGATGCTTGTTTGAGGATGGCTTGTGTGGATCACTGGAGACCTGTGTGAACGATGGTGTGTTTGGAAGATGTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 90 bp CCATCAGCTGCTTCCCCTTCTCTGGACTTAGAGGGTTGTTTCCTGTaGGGATGTATCCCTGCTGTTCCTCAGAAGGCTGCACTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PSAASPSLDLEGCFL*GCIPAVPQKAALPA
Trigger: AGCTGGAAGTGCAGCCTTCTGAGGAACAGCAGGGATACATCCTCACAGGAAACAACCCTCTAAGTCCAGAGAAGGGGAAGCAGCTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp CTTCTGTTTGTCTATGTCACCGTCTACCTTGGGGCTGAGCTCATCTaGCTGGAGCCGGCTAAAGGGCCGCAGAAGGTTATCAGGATACTT +
Preference number: 5 (lower is better)
Translates to: LLFVYVTVYLGAELI*LEPAKGPQKVIRIL
Trigger: AAGTATCCTGATAACCTTCTGCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACATAGACAAACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp TGTAGTCGGAACTGCCATGGCTGTTTTGAGACTTCAACAGGATCCTaGAGTGGTCATAGGTCAGCACAGCCAGGGAACGGTTCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: CSRNCHGCFETSTGS*SGHRSAQPGNGSWV
Trigger: CACCCAAGAACCGTTCCCTGGCTGTGCTGACCTATGACCACTCCAGGATCCTGTTGAAGTCTCAAAACAGCCATGGCAGTTCCGACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CCTGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGGGTATAGTCATCTaGCCACGTGAAACCTGTACG +
Preference number: 5 (lower is better)
Translates to: PALTVEPEGPCYYTEDAGLGIVI*PRETCT
Trigger: CGTACAGGTTTCACGTGGCAAGATGACTATACCCAG...TCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATAGAAGAGTCTTCACCCTaGGCTGGACGAGTCTCATGG +
Preference number: 5 (lower is better)
Translates to: LTVEPEGPCYYTEDAGLIEESSP*AGRVSW
Trigger: CCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTC...TATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTAGGTTATCAGGATACTaGGCCCGGGTTGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCRLSGY*ARVAGG
Trigger: TCCTCCTGCAACCCGGGCCAAGTATCCTGATAACCT...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GGAGAGAGAGTGAAAGGCTGCCTACCCTTGTGTGAACAGGCTCAGCAAAGCCAGATGTTGGCACTTACTTaGAAGGTCACTGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GERVKGCLPLCEQAQQSQMLALT*KVTAGP
Trigger: GGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACAT...CTGGCTTTGCTGAGCCTGTTCACACAAGGGTAGGCAGCCTTTCACTCTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS CCA 90 bp ATGTTCTCAGGGGAAGAGTCTTCACCCTTGGCTGGACGAGTCTCATaGTCTATCCTAGAGTGTGCATTTGCTGTTGGGGTCTGGGACAGA +
Preference number: 5 (lower is better)
Translates to: MFSGEESSPLAGRVS*SILECAFAVGVWDR
Trigger: TCTGTCCCAGACCCCAACAGCAAATGCACACTCTAGGATAGACCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTCCCCTGAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp CACGTAGGTCAGGATGTTCTCAGGGGAAGAGTCTTCACCCTTGGCTaGACGAGTCTCATGGTCTATCCTAGAGTGTGCATTTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: HVGQDVLRGRVFTLG*TSLMVYPRVCICCW
Trigger: CCAACAGCAAATGCACACTCTAGGATAGACCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTCCCCTGAGAACATCCTGACCTACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTTCTGAGACAAAGCAGTaGCTGAGAATGGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTSETKQ*LRMALV
Trigger: CACCAAGGCCATTCTCAGCAACTGCTTTGTCTCAGA...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATCCCTGTGCTGCCAATTaGAGGCTTTCTTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDPCAAN*RLSSSS
Trigger: GGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGGG...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTTGGGATGAGACGCTGTaGATGCGTGATGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTWDETL*MRDVCG
Trigger: ACCACATACATCACGCATCAACAGCGTCTCATCCCA...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGACTCAAACTGCTCCTTaGTCTGGACCATGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GARRTLLLHRRCRTDILLTQTAP*SGPCLV
Trigger: GACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGT...CAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000070733.9
CDS CCA 90 bp ATATCTGCAAAGAAGCTGGAAGGTACCCGGAGGATGTGGGCAACTTaGTCCATCAGCTGCTTCCCCTTCTCTGGACTTAGAGGGTTGTTT +
Preference number: 5 (lower is better)
Translates to: ISAKKLEGTRRMWAT*SISCFPFSGLRGLF
Trigger: AAACAACCCTCTAAGTCCAGAGAAGGGGAAGCAGCTGATGGACCAAGTTGCCCACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGTGTGCATTTGCTGTaGGGGTCTGGGACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGSVHLL*GSGTEA
Trigger: AGCTTCTGTCCCAGACCCCAACAGCAAATGCACACT...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGGAAGAGTCTTCACCCTaGGCTGGACGAGTCTCATGG +
Preference number: 5 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSEESSP*AGRVSW
Trigger: CCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTC...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTAGGTTATCAGGATACTaGGCCCGGGTTGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSRLSGY*ARVAGG
Trigger: TCCTCCTGCAACCCGGGCCAAGTATCCTGATAACCT...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTTCTCCCGTGGCTTTCTaGGCTTCCCTCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTSPVAF*ASLCRI
Trigger: GATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAGA...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTGGAAGCTCAGACGGTaGACCTCCTTGTACACTGGG +
Preference number: 5 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSWKLRR*TSLYTG
Trigger: CCCAGTGTACAAGGAGGTCAACCGTCTGAGCTTCCA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGCCCTGTGCTGCCAATTaGAGGCTTTCTTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWPCAAN*RLSSSS
Trigger: GGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGGG...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCTCCAGCTGGTCTTTGTaGTCAGCTGCAGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: PCYYTEDAGLISCCGSGSSSWSL*SAAALM
Trigger: CATCAAGGCTGCAGCTGACAACAAAGACCAGCTGGA...GCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGATTCTCCAGCTGGTCTTaGTTGTCAGCTGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GPCYYTEDAGLISCCGSGFSSWS*LSAAAL
Trigger: CAAGGCTGCAGCTGACAACAAAGACCAGCTGGAGAA...TCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp ACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATTTCTCCAGGCGGTTCTaGTTCTTCAGATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TDCGARRTLLLHRRCRTDFSRRF*FFRWSS
Trigger: GGAAGACCATCTGAAGAACAAGAACCGCCTGGAGAA...ATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CCTTCCTTCCATCCTAACTGGGTGTTTCCACACATGTGCTATTTGGTCAATCAGACCGTGCGAGTCTCGTaGGTCTGCAGGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSFHPNWVFPHMCYLVNQTVRVS*VCRFFR
Trigger: CCTGAAGAACCTGCAGACCAACGAGACTCGCACGGT...CTGATTGACCAAATAGCACATGTGTGGAAACACCCAGTTAGGATGGAAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS GCA 90 bp GATTGTCAGTCCAGTTGCCTTCTCCAGCTGGTCTTTGTTGTCAGCTaGAGCCTTGATGACATCGGCAGTTGTCATGTTTTGGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: DCQSSCLLQLVFVVS*SLDDIGSCHVLDVG
Trigger: GCCAACATCCAAAACATGACAACTGCCGATGTCATCAAGGCTGCAGCTGACAACAAAGACCAGCTGGAGAAGGCAACTGGACTGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCATCACCGGAACCTTTaGACATCTTCCAAACACACC +
Preference number: 5 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCHHRNL*TSSKHT
Trigger: GGTGTGTTTGGAAGATGTCAAAAGGTTCCGGTGATG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTCTGAGACAAAGCAGTaGCTGAGAATGGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RRTLLLHRRCRTDILLRFSETKQ*LRMALV
Trigger: CACCAAGGCCATTCTCAGCAACTGCTTTGTCTCAGA...GAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTCTGGACTTAGAGGGTaGTTTCCTGTGAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: ARRTLLLHRRCRTDILLRSGLRG*FPVRMY
Trigger: ATACATCCTCACAGGAAACAACCCTCTAAGTCCAGA...CCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GCAAACTCAAACTGCTCCTTTGTCTGGACCATGCCTGGTCTCTGGTCCCTCAAGGCTGGTCCCAAAACTTaGATATCTGCAAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ANSNCSFVWTMPGLWSLKAGPKT*ISAKKL
Trigger: CAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGC...CTTGAGGGACCAGAGACCAGGCATGGTCCAGACAAAGGAGCAGTTTGAGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTCGTTCTCCAGCTGGTCTTaGTTGTCAGCTGCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LLHRRCRTDILLRFWKHSFSSWS*LSAAAL
Trigger: CAAGGCTGCAGCTGACAACAAAGACCAGCTGGAGAA...CGAGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp AGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGTGGGATGAGACGCTGTaGATGCGTGATGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: RTLLLHRRCRTDILLRFWWDETL*MRDVCG
Trigger: ACCACATACATCACGCATCAACAGCGTCTCATCCCA...CCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp AAAACTTTGATATCTGCAAAGAAGCTGGAAGGTACCCGGAGGATGTaGGCAACTTGGTCCATCAGCTGCTTCCCCTTCTCTGGACTTAGA +
Preference number: 5 (lower is better)
Translates to: KTLISAKKLEGTRRM*ATWSISCFPFSGLR
Trigger: TCTAAGTCCAGAGAAGGGGAAGCAGCTGATGGACCAAGTTGCCCACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTAGTGTGCATTTGCTGTaGGGGTCTGGGACAGAAGCT +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTSVHLL*GSGTEA
Trigger: AGCTTCTGTCCCAGACCCCAACAGCAAATGCACACT...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCTGGACTTAGAGGGTaGTTTCCTGTGAGGATGTAT +
Preference number: 5 (lower is better)
Translates to: CGARRTLLLHRRCRTDILSGLRG*FPVRMY
Trigger: ATACATCCTCACAGGAAACAACCCTCTAAGTCCAGA...CAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGCTGGTCCCAAAACTTaGATATCTGCAAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCAGPKT*ISAKKL
Trigger: CAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGC...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGCACTGACTGTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGGCAGTTGTCATGTTTaGGATGTTGGCACTTACTTT +
Preference number: 5 (lower is better)
Translates to: CTDCGARRTLLLHRRCRTGSCHV*DVGTYF
Trigger: AAAGTAAGTGCCAACATCCAAAACATGACAACTGCC...AGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCACAGTCAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTGGATTGTCAGTCCAGTaGCCTTCTCCAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTGLSVQ*PSPAGL
Trigger: AAGACCAGCTGGAGAAGGCAACTGGACTGACAATCC...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCCATCTTATTGAGAACGGATTGTCAGTCCAGTaGCCTTCTCCAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: QGRCDINLFSTFGHLIENGLSVQ*PSPAGL
Trigger: AAGACCAGCTGGAGAAGGCAACTGGACTGACAATCC...GTTCTCAATAAGATGGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCTTCCACTTTGAAGGATaGTCAGTCCAGTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: EPEGPCYYTEDAGLISCCFHFEG*SVQLPS
Trigger: AGAAGGCAACTGGACTGACAATCCTTCAAAGTGGAA...GCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 90 bp TCCACCCCAGCAGTCTCCTCTTCTGAAGACAAGACCTCCTCTGGCTaGTCTGATTTCTTAATCTCTTCTCTGGAGGATTTTTCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: STPAVSSSEDKTSSG*SDFLISSLEDFSRR
Trigger: CCTTCTAGAAAAATCCTCCAGAGAAGAGATTAAGAAATCAGAGCAGCCAGAGGAGGTCTTGTCTTCAGAAGAGGAGACTGCTGGGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp CAGGGTCGCTGCGATATCAATCTCTTTAGCACCTTTGGCCATCTTATTGAGAACCTGGGTATAGTCATCTaGCCACGTGAAACCTGTACG +
Preference number: 5 (lower is better)
Translates to: QGRCDINLFSTFGHLIENLGIVI*PRETCT
Trigger: CGTACAGGTTTCACGTGGCAAGATGACTATACCCAG...GTTCTCAATAAGATGGCCAAAGGTGCTAAAGAGATTGATATCGCAGCGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTATGTTGGCACTTACTTaGAAGGTCACTGCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTMLALT*KVTAGP
Trigger: GGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACAT...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TTTAGCACCTTTGGCCATCTTATTGAGAACCATGTCAATCAGGACGTAGGTTCCTCCAGCTGGTCTTTGTaGTCAGCTGCAGCCTTGATG +
Preference number: 5 (lower is better)
Translates to: FSTFGHLIENHVNQDVGSSSWSL*SAAALM
Trigger: CATCAAGGCTGCAGCTGACAACAAAGACCAGCTGGA...GGAACCTACGTCCTGATTGACATGGTTCTCAATAAGATGGCCAAAGGTGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTTTCTCCAGGCGGTTCTaGTTCTTCAGATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTFSRRF*FFRWSS
Trigger: GGAAGACCATCTGAAGAACAAGAACCGCCTGGAGAA...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GTGGAGCCCGAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTCTGAACCATTTTTCATaGTCAGCATTCTGTTGTAAG +
Preference number: 5 (lower is better)
Translates to: VEPEGPCYYTEDAGLISCLNHFS*SAFCCK
Trigger: CTTACAACAGAATGCTGACAATGAAAAATGGTTCAG...ACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTCGGGCTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp GAAGGACCCTGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGCAGTTGTCATGTTTaGGATGTTGGCACTTACTTT +
Preference number: 5 (lower is better)
Translates to: EGPCYYTEDAGLISCCGSGSCHV*DVGTYF
Trigger: AAAGTAAGTGCCAACATCCAAAACATGACAACTGCC...AGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACAGGGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS-3UTR CAA 90 bp TGTTACTACACAGAAGATGCAGGACTGATATCCTGTTGCGGTTCTGGAAGCACTTTCCACTTTGAAGGATaGTCAGTCCAGTTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CYYTEDAGLISCCGSGSTFHFEG*SVQLPS
Trigger: AGAAGGCAACTGGACTGACAATCCTTCAAAGTGGAA...AGTGCTTCCAGAACCGCAACAGGATATCAGTCCTGCATCTTCTGTGTAGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 90 bp GGCAGTTGTCATGTTTTGGATGTTGGCACTTACTTTGAAGGTCACTaGTGGTCCCAAAACTTTGATATCTGCAAAGAAGCTGGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: GSCHVLDVGTYFEGH*WSQNFDICKEAGRY
Trigger: GTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 90 bp AGTTGTCATGTTTTGGATGTTGGCACTTACTTTGAAGGTCACTGCTaGTCCCAAAACTTTGATATCTGCAAAGAAGCTGGAAGGTACCCG +
Preference number: 5 (lower is better)
Translates to: SCHVLDVGTYFEGHC*SQNFDICKEAGRYP
Trigger: CGGGTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CTGGGCCGGACGCTTCCCCATGCCATAGGTAGGCCTTaGGGAGGTTTGCAAGCTCCTGGGCAATCACACGCT +
Preference number: 6 (lower is better)
Translates to: LGRTLPHAIGRP*GGLQAPGQSHA
Trigger: AGCGTGTGATTGCCCAGGAGCTTGCAAACCTCCCCAAGGCCTACCTATGGCATGGGGAAGCGTCCGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CCATACGCTGGCGGCATAGCTCCTGGTAGGCTTCAGTaGCATCTGCACTGGGGTCAGCGCCTAGTCCAGACA +
Preference number: 6 (lower is better)
Translates to: PYAGGIAPGRLQ*HLHWGQRLVQT
Trigger: TGTCTGGACTAGGCGCTGACCCCAGTGCAGATGCCACTGAAGCCTACCAGGAGCTATGCCGCCAGCGTATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp CTGGGCCGGACGCTTCCCCATGCCATAGGTAGGCCTTGGGGAGGTTaGCAAGCTCCTGGGCAATCACACGCTGGGTATAGTCATCTTGCC +
Preference number: 6 (lower is better)
Translates to: LGRTLPHAIGRPWGG*QAPGQSHAGYSHLA
Trigger: GGCAAGATGACTATACCCAGCGTGTGATTGCCCAGGAGCTTGCAAACCTCCCCAAGGCCTACCTATGGCATGGGGAAGCGTCCGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp CCTGTGAGGATGTATCCCTGCTGTTCCTCAGAAGGCTaGACTTCCAGCTGTAGGCCTCCACTAGGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: PVRMYPCCSSEG*TSSCRPPLGGP
Trigger: GGGACCCCCTAGTGGAGGCCTACAGCTGGAAGTGCAGCCTTCTGAGGAACAGCAGGGATACATCCTCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp GGCATCGGCCCATCGCTGAACTGGGATGAGACGCTGTaGATGCGTGATGTATGTGGTCCCTCAGAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: GIGPSLNWDETL*MRDVCGPSERS
Trigger: GGACCGCTCTGAGGGACCACATACATCACGCATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp CCCAGTGCTGCAATCAGCTTCTGTTTGTCTATGTCACCGTCTACCTaGGGGCTGAGCTCATCTGGCTGGAGCCGGCTAAAGGGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: PSAAISFCLSMSPST*GLSSSGWSRLKGRR
Trigger: TCTGCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACATAGACAAACAGAAGCTGATTGCAGCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp GAAGGACTAGGCATCGGCCCATCGCTGAACTGGGATGAGACGCTGTaGATGCGTGATGTATGTGGTCCCTCAGAGCGGTCCTGTGGACGA +
Preference number: 6 (lower is better)
Translates to: EGLGIGPSLNWDETL*MRDVCGPSERSCGR
Trigger: TCGTCCACAGGACCGCTCTGAGGGACCACATACATCACGCATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGCCTAGTCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TCCTTCAGGGGGCCCAGGCGGTCCACTTCAGAGTTCTaGTGCAAATCCTTCAGGAGACTCTGCAGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: SFRGPRRSTSEF*CKSFRRLCRSV
Trigger: CACACTCCTGCAGAGTCTCCTGAAGGATTTGCAGCAGAACTCTGAAGTGGACCGCCTGGGCCCCCTGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp ATGTCACCGTCTACCTTGGGGCTGAGCTCATCTGGCTaGAGCCGGCTAAAGGGCCGCAGAAGGTTATCAGGA +
Preference number: 6 (lower is better)
Translates to: MSPSTLGLSSSG*SRLKGRRRLSG
Trigger: TCCTGATAACCTTCTGCGGCCCTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 72 bp ATACTTGGCCCGGGTTGCAGGAGGATAGGTCAGTGCTaGTGTGTGGGCCACGTAGGTCAGGATGTTCTCAGG +
Preference number: 6 (lower is better)
Translates to: ILGPGCRRIGQC*CVGHVGQDVLR
Trigger: CCTGAGAACATCCTGACCTACGTGGCCCACACATCAGCACTGACCTATCCTCCTGCAACCCGGGCCAAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TTCAGGGGGCCCAGGCGGTCCACTTCAGAGTTCTGCTaGAAATCCTTCAGGAGACTCTGCAGGAGTGTGTCA +
Preference number: 6 (lower is better)
Translates to: FRGPRRSTSEFC*KSFRRLCRSVS
Trigger: TGACACACTCCTGCAGAGTCTCCTGAAGGATTTGCAGCAGAACTCTGAAGTGGACCGCCTGGGCCCCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CCTTGGTGCTCTCGCGGAACCATGTACAAGGTACCGTaGCTCTGGGTCATTTTCTCCAGGAAGCCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: PWCSRGTMYKVP*LWVIFSRKPLS
Trigger: GCTCAGAGGCTTCCTGGAGAAAATGACCCAGAGCCACGGTACCTTGTACATGGTTCCGCGAGAGCACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GCAGGAGTGTGTCATCATCCATACTCGGGGAGTCTTTaGCGTCTCCAGGAGGTGGAGGCCATCTCTGAGACA +
Preference number: 6 (lower is better)
Translates to: AGVCHHPYSGSL*RLQEVEAISET
Trigger: TGTCTCAGAGATGGCCTCCACCTCCTGGAGACGCCAAAGACTCCCCGAGTATGGATGATGACACACTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CTTGGCTGTCCTTCAGCCCCTCTCCCGTGGCTTTCTTaGCTTCCCTCTGCAGGATCACTTTGTATGGCTCCA +
Preference number: 6 (lower is better)
Translates to: LGCPSAPLPWLS*LPSAGSLCMAP
Trigger: TGGAGCCATACAAAGTGATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAGAGGGGCTGAAGGACAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GGCATAGCTCCTGGTAGGCTTCAGTGGCATCTGCACTaGGGTCAGCGCCTAGTCCAGACAACTTGTCCTTCA +
Preference number: 6 (lower is better)
Translates to: GIAPGRLQWHLH*GQRLVQTTCPS
Trigger: TGAAGGACAAGTTGTCTGGACTAGGCGCTGACCCCAGTGCAGATGCCACTGAAGCCTACCAGGAGCTATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CGAGCCGAAGGACTAGGCATCGGCCCATCGCTGAACTaGGATGAGACGCTGTTGATGCGTGATGTATGTGGT +
Preference number: 6 (lower is better)
Translates to: RAEGLGIGPSLN*DETLLMRDVCG
Trigger: ACCACATACATCACGCATCAACAGCGTCTCATCCCAGTTCAGCGATGGGCCGATGCCTAGTCCTTCGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TCTTGGCTGTCCTTCAGCCCCTCTCCCGTGGCTTTCTaGGCTTCCCTCTGCAGGATCACTTTGTATGGCTCC +
Preference number: 6 (lower is better)
Translates to: SWLSFSPSPVAF*ASLCRITLYGS
Trigger: GGAGCCATACAAAGTGATCCTGCAGAGGGAAGCCAAGAAAGCCACGGGAGAGGGGCTGAAGGACAGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp GCTTTCTTCATCCTCCCACAACTCTGGAGCTCGGTTTaGGAACTGATCCTCAAGCCTCCTGGGCTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: AFFILPQLWSSV*ELILKPPGLGL
Trigger: GAGCCCCAGCCCAGGAGGCTTGAGGATCAGTTCCAAAACCGAGCTCCAGAGTTGTGGGAGGATGAAGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp ACTTCCAGCTGTAGGCCTCCACTAGGGGGTCCCTGTGCTGCCAATTaGAGGCTTTCTTCATCCTCCCACAACTCTGGAGCTCGGTTTTGG +
Preference number: 6 (lower is better)
Translates to: TSSCRPPLGGPCAAN*RLSSSSHNSGARFW
Trigger: CCAAAACCGAGCTCCAGAGTTGTGGGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGGGACCCCCTAGTGGAGGCCTACAGCTGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 72 bp TCATCCTCCCACAACTCTGGAGCTCGGTTTTGGAACTaGTCCTCAAGCCTCCTGGGCTGGGGCTCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: SSSHNSGARFWN*SSSLLGWGSEF
Trigger: AAACTCAGAGCCCCAGCCCAGGAGGCTTGAGGATCAGTTCCAAAACCGAGCTCCAGAGTTGTGGGAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp TTGAAGCATTGTCTCTGGGGCATCTGTCTGCTCTCTTaGCTGTCCTTCAGCCCCTCTCCCGTGGCTTTCTTG +
Preference number: 6 (lower is better)
Translates to: LKHCLWGICLLS*LSFSPSPVAFL
Trigger: CAAGAAAGCCACGGGAGAGGGGCTGAAGGACAGCCAAGAGAGCAGACAGATGCCCCAGAGACAATGCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TGTAGGCCTCCACTAGGGGGTCCCTGTGCTGCCAATTaGAGGCTTTCTTCATCCTCCCACAACTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: CRPPLGGPCAAN*RLSSSSHNSGA
Trigger: AGCTCCAGAGTTGTGGGAGGATGAAGAAAGCCTCAAATTGGCAGCACAGGGACCCCCTAGTGGAGGCCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TGGACGAGTCTCATGGTCTATCCTAGAGTGTGCATTTaGTGTTGGGGTCTGGGACAGAAGCTCCAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: WTSLMVYPRVCI*CWGLGQKLQVG
Trigger: CCCTACCTGGAGCTTCTGTCCCAGACCCCAACAGCAAATGCACACTCTAGGATAGACCATGAGACTCGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TCCAGGAAGCCTCTGAGCAGTGTAGGCGCCCAGTGCTaGAATCAGCTTCTGTTTGTCTATGTCACCGTCTAC +
Preference number: 6 (lower is better)
Translates to: SRKPLSSVGAQC*NQLLFVYVTVY
Trigger: GTAGACGGTGACATAGACAAACAGAAGCTGATTGCAGCACTGGGCGCCTACACTGCTCAGAGGCTTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TTCTCCAGGAAGCCTCTGAGCAGTGTAGGCGCCCAGTaGTGCAATCAGCTTCTGTTTGTCTATGTCACCGTC +
Preference number: 6 (lower is better)
Translates to: FSRKPLSSVGAQ*CNQLLFVYVTV
Trigger: GACGGTGACATAGACAAACAGAAGCTGATTGCAGCACTGGGCGCCTACACTGCTCAGAGGCTTCCTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GGGGAAGAGTCTTCACCCTTGGCTGGACGAGTCTCATaGTCTATCCTAGAGTGTGCATTTGCTGTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: GEESSPLAGRVS*SILECAFAVGV
Trigger: GACCCCAACAGCAAATGCACACTCTAGGATAGACCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp AAGAAGCTGGAAGGTACCCGGAGGATGTGGGCAACTTaGTCCATCAGCTGCTTCCCCTTCTCTGGACTTAGA +
Preference number: 6 (lower is better)
Translates to: KKLEGTRRMWAT*SISCFPFSGLR
Trigger: TCTAAGTCCAGAGAAGGGGAAGCAGCTGATGGACCAAGTTGCCCACATCCTCCGGGTACCTTCCAGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp AAGTGGGCCTTGGGTGGCAATGTATGCGGGGTTTCGTaGGTCATGGTCCATAATGGGGCTGGCATTGATGTA +
Preference number: 6 (lower is better)
Translates to: KWALGGNVCGVS*VMVHNGAGIDV
Trigger: TACATCAATGCCAGCCCCATTATGGACCATGACCCACGAAACCCCGCATACATTGCCACCCAAGGCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp GCAATCAGCTTCTGTTTGTCTATGTCACCGTCTACCTaGGGGCTGAGCTCATCTGGCTGGAGCCGGCTAAAG +
Preference number: 6 (lower is better)
Translates to: AISFCLSMSPST*GLSSSGWSRLK
Trigger: CTTTAGCCGGCTCCAGCCAGATGAGCTCAGCCCCAAGGTAGACGGTGACATAGACAAACAGAAGCTGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp GCCATCTCTGAGACAAAGCAGTTGCTGAGAATGGCCTaGGTGCTCTCGCGGAACCATGTACAAGGTACCGTG +
Preference number: 6 (lower is better)
Translates to: AISETKQLLRMA*VLSRNHVQGTV
Trigger: CACGGTACCTTGTACATGGTTCCGCGAGAGCACCAAGGCCATTCTCAGCAACTGCTTTGTCTCAGAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TCCTTCAAGAGGTCCCCAAGCTGGAAGCTCAGACGGTaGACCTCCTTGTACACTGGGTCATCCACCTCTGAT +
Preference number: 6 (lower is better)
Translates to: SFKRSPSWKLRR*TSLYTGSSTSD
Trigger: ATCAGAGGTGGATGACCCAGTGTACAAGGAGGTCAACCGTCTGAGCTTCCAGCTTGGGGACCTCTTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GGGGCTCTGAGTTTGGTTTCCTTTCAAATAGGTCTTTaGAGTAAGTCCGGCTCCTCACATGCTCCACCCCAG +
Preference number: 6 (lower is better)
Translates to: GALSLVSFQIGL*SKSGSSHAPPQ
Trigger: CTGGGGTGGAGCATGTGAGGAGCCGGACTTACTCCAAAGACCTATTTGAAAGGAAACCAAACTCAGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp ATATCTGCAAAGAAGCTGGAAGGTACCCGGAGGATGTaGGCAACTTGGTCCATCAGCTGCTTCCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: ISAKKLEGTRRM*ATWSISCFPFS
Trigger: AGAGAAGGGGAAGCAGCTGATGGACCAAGTTGCCCACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp AACTGCCATGGCTGTTTTGAGACTTCAACAGGATCCTaGAGTGGTCATAGGTCAGCACAGCCAGGGAACGGT +
Preference number: 6 (lower is better)
Translates to: NCHGCFETSTGS*SGHRSAQPGNG
Trigger: ACCGTTCCCTGGCTGTGCTGACCTATGACCACTCCAGGATCCTGTTGAAGTCTCAAAACAGCCATGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp GGCAATGGAGAGGAAGGTGAGCAAAATGAACTTGGTAGAGTCCTCTaGCTCTTCCTGATGCGGCAGGAGTTTGAGCTTTCCCTTCGGCCT +
Preference number: 6 (lower is better)
Translates to: GNGEEGEQNELGRVL*LFLMRQEFELSLRP
Trigger: AGGCCGAAGGGAAAGCTCAAACTCCTGCCGCATCAGGAAGAGCAAGAGGACTCTACCAAGTTCATTTTGCTCACCTTCCTCTCCATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp GGTTTTGGAACTGATCCTCAAGCCTCCTGGGCTGGGGCTCTGAGTTaGGTTTCCTTTCAAATAGGTCTTTGGAGTAAGTCCGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: GFGTDPQASWAGALS*VSFQIGLWSKSGSS
Trigger: TGAGGAGCCGGACTTACTCCAAAGACCTATTTGAAAGGAAACCAAACTCAGAGCCCCAGCCCAGGAGGCTTGAGGATCAGTTCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp CATAATGGGGCTGGCATTGATGTAGTCGGAACTGCCATGGCTGTTTaGAGACTTCAACAGGATCCTGGAGTGGTCATAGGTCAGCACAGC +
Preference number: 6 (lower is better)
Translates to: HNGAGIDVVGTAMAV*RLQQDPGVVIGQHS
Trigger: GCTGTGCTGACCTATGACCACTCCAGGATCCTGTTGAAGTCTCAAAACAGCCATGGCAGTTCCGACTACATCAATGCCAGCCCCATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 72 bp GTAGCATTTGTTCACTTTTCTGCGGAAATCCAGGAGTaGCCTCGTGGAGGAAGGGACTCCCTGGTCATACCA +
Preference number: 6 (lower is better)
Translates to: VAFVHFSAEIQE*PRGGRDSLVIP
Trigger: TGGTATGACCAGGGAGTCCCTTCCTCCACGAGGTCACTCCTGGATTTCCGCAGAAAAGTGAACAAATGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp AGTCTCATGGTCTATCCTAGAGTGTGCATTTGCTGTTaGGGTCTGGGACAGAAGCTCCAGGTAGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: SLMVYPRVCICC*GLGQKLQVGQI
Trigger: TATCTGCCCTACCTGGAGCTTCTGTCCCAGACCCCAACAGCAAATGCACACTCTAGGATAGACCATGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp CAGGATGTTCTCAGGGGAAGAGTCTTCACCCTTGGCTaGACGAGTCTCATGGTCTATCCTAGAGTGTGCATT +
Preference number: 6 (lower is better)
Translates to: QDVLRGRVFTLG*TSLMVYPRVCI
Trigger: AATGCACACTCTAGGATAGACCATGAGACTCGTCCAGCCAAGGGTGAAGACTCTTCCCCTGAGAACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp GGTCATCCACCTCTGATAGTCTGTGATCTTGAAGCATaGTCTCTGGGGCATCTGTCTGCTCTCTTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: GHPPLIVCDLEA*SLGHLSALLAV
Trigger: GACAGCCAAGAGAGCAGACAGATGCCCCAGAGACAATGCTTCAAGATCACAGACTATCAGAGGTGGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TCCATCAGCTGCTTCCCCTTCTCTGGACTTAGAGGGTaGTTTCCTGTGAGGATGTATCCCTGCTGTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SISCFPFSGLRG*FPVRMYPCCSS
Trigger: TGAGGAACAGCAGGGATACATCCTCACAGGAAACAACCCTCTAAGTCCAGAGAAGGGGAAGCAGCTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp AGGATTGTCAGTCCAGTTGCCTTCTCCAGCTGGTCTTaGTTGTCAGCTGCAGCCTTGATGACATCGGCAGTT +
Preference number: 6 (lower is better)
Translates to: RIVSPVAFSSWS*LSAAALMTSAV
Trigger: AACTGCCGATGTCATCAAGGCTGCAGCTGACAACAAAGACCAGCTGGAGAAGGCAACTGGACTGACAATCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 72 bp TCTTCCAAACACACCATCGTTCACACAGGTCTCCAGTaGTCCACACAAGCCATCCTCAAACAAGCATCCCAG +
Preference number: 6 (lower is better)
Translates to: SSKHTIVHTGLQ*STQAILKQASQ
Trigger: CTGGGATGCTTGTTTGAGGATGGCTTGTGTGGATCACTGGAGACCTGTGTGAACGATGGTGTGTTTGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TTTGAAGGTCACTGCTGGTCCCAAAACTTTGATATCTaGAAAGAAGCTGGAAGGTACCCGGAGGATGTGGGC +
Preference number: 6 (lower is better)
Translates to: FEGHCWSQNFDI*KEAGRYPEDVG
Trigger: GCCCACATCCTCCGGGTACCTTCCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp TCCAGTTGCCTTCTCCAGCTGGTCTTTGTTGTCAGCTaGAGCCTTGATGACATCGGCAGTTGTCATGTTTTG +
Preference number: 6 (lower is better)
Translates to: SSCLLQLVFVVS*SLDDIGSCHVL
Trigger: CAAAACATGACAACTGCCGATGTCATCAAGGCTGCAGCTGACAACAAAGACCAGCTGGAGAAGGCAACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp TGCCAATTTGAGGCTTTCTTCATCCTCCCACAACTCTaGAGCTCGGTTTTGGAACTGATCCTCAAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: CQFEAFFILPQL*SSVLELILKPP
Trigger: AGGAGGCTTGAGGATCAGTTCCAAAACCGAGCTCCAGAGTTGTGGGAGGATGAAGAAAGCCTCAAATTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp ACTGATCCTCAAGCCTCCTGGGCTGGGGCTCTGAGTTaGGTTTCCTTTCAAATAGGTCTTTGGAGTAAGTCC +
Preference number: 6 (lower is better)
Translates to: TDPQASWAGALS*VSFQIGLWSKS
Trigger: GGACTTACTCCAAAGACCTATTTGAAAGGAAACCAAACTCAGAGCCCCAGCCCAGGAGGCTTGAGGATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS TCA 72 bp GGAAATCCTGGCACCATATGTGCTCAGAGACTAGATTaGCCTCGTAGACATGGTAGAGGTTGGAGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: GNPGTICAQRLD*PRRHGRGWSLH
Trigger: ATGAAGGCTCCAACCTCTACCATGTCTACGAGGTCAATCTAGTCTCTGAGCACATATGGTGCCAGGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GCTGCAGCCTTGATGACATCGGCAGTTGTCATGTTTTaGATGTTGGCACTTACTTTGAAGGTCACTGCTGGT +
Preference number: 6 (lower is better)
Translates to: AAALMTSAVVMF*MLALTLKVTAG
Trigger: ACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACTGCCGATGTCATCAAGGCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp AGCTGCAGCCTTGATGACATCGGCAGTTGTCATGTTTaGGATGTTGGCACTTACTTTGAAGGTCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: SCSLDDIGSCHV*DVGTYFEGHCW
Trigger: CCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACTGCCGATGTCATCAAGGCTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TACCTCATATCGGTAAGTGTCCATCACCGGAACCTTTaGACATCTTCCAAACACACCATCGTTCACACAGGT +
Preference number: 6 (lower is better)
Translates to: YLISVSVHHRNL*TSSKHTIVHTG
Trigger: ACCTGTGTGAACGATGGTGTGTTTGGAAGATGTCAAAAGGTTCCGGTGATGGACACTTACCGATATGAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CCA 72 bp GTTTTGGATGTTGGCACTTACTTTGAAGGTCACTGCTaGTCCCAAAACTTTGATATCTGCAAAGAAGCTGGA +
Preference number: 6 (lower is better)
Translates to: VLDVGTYFEGHC*SQNFDICKEAG
Trigger: TCCAGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 72 bp TCGGCAGTTGTCATGTTTTGGATGTTGGCACTTACTTaGAAGGTCACTGCTGGTCCCAAAACTTTGATATCT +
Preference number: 6 (lower is better)
Translates to: SAVVMFWMLALT*KVTAGPKTLIS
Trigger: AGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACTGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS CAA 90 bp TTGATGACATCGGCAGTTGTCATGTTTTGGATGTTGGCACTTACTTaGAAGGTCACTGCTGGTCCCAAAACTTTGATATCTGCAAAGAAG +
Preference number: 6 (lower is better)
Translates to: LMTSAVVMFWMLALT*KVTAGPKTLISAKK
Trigger: CTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATGACAACTGCCGATGTCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7
CDS GCA 72 bp CATGTTTTGGATGTTGGCACTTACTTTGAAGGTCACTaGTGGTCCCAAAACTTTGATATCTGCAAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: HVLDVGTYFEGH*WSQNFDICKEA
Trigger: AGCTTCTTTGCAGATATCAAAGTTTTGGGACCAGCAGTGACCTTCAAAGTAAGTGCCAACATCCAAAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000070733.9
ENSMUST00000190247.7