Pregenerated sensors for PTPRN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026204Ensembl transcript IDs: ENSMUST00000027404.12, ENSMUST00000186178.7, ENSMUST00000189769.7
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGGACGCACATATCCAGAGAGGGAGACAGAGACTCAGGTAGGATaGGGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: WGRTYPERETETQVG*GSGTPVAGVHASPC Trigger: GCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCCCCATCCTACCTGAGTCTCTGTCTCCCTCTCTGGATATGTGCGTCCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR TCA 90 bp | GGCTCCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTaGAGAGTGGGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: GSHGQVRPRWQMGRG*RVGAQMLTQAEGAE Trigger: CTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR GCA 90 bp | GGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTaGTTCCCATGGGATACCATGGTTCTAGCATGGATAAAGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GHTCGRCPRLSLPAV*FPWDTMVLAWIKQG Trigger: GCCCTGCTTTATCCATGCTAGAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 90 bp | ATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTaGGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: MAKSDQGGRWVGAEE*VHRCSHRQKEPRPG Trigger: TCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 90 bp | TGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATaGGATACCATGGTTCTAGCATGGATAAAGCAGGGCGAGCCTACC | + |
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Preference number: 1 (lower is better) Translates to: CGRCPRLSLPAVCFP*DTMVLAWIKQGEPT Trigger: GGTAGGCTCGCCCTGCTTTATCCATGCTAGAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTCCTTCCACACTGGGTTaGGAAAGGCTCCCATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: GSGTPVAGVHASPCLLSAPSTLG*ERLPWP Trigger: TGGCCATGGGAGCCTTTCCCAACCCAGTGTGGAAGG...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR CCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTGGGAAAGGCTCCCATaGCCAAGTCAGACCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSGTPVAGVHASPCLLSAWERLP*PSQTKV Trigger: CACCTTGGTCTGACTTGGCCATGGGAGCCTTTCCCA...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CAA 90 bp | GAGAAGGTTGAGCAGGGTCAAGGTGGCAGGCCAGTGGTAGCAGGGTaGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: EKVEQGQGGRPVVAG*GELGFPRSALSIGG Trigger: ACCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACCACTGGCCTGCCACCTTGACCCTGCTCAACCTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR TCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGCAGATGGGTAGGGGCTaGAGAGTGGGTGCACAGATG | + |
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Preference number: 2 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWQMGRG*RVGAQM Trigger: CATCTGTGCACCCACTCTTCAGCCCCTACCCATCTG...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGGGGCTGAAGAGTGGGTaGACAGATGCTCACACAGGC | + |
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Preference number: 2 (lower is better) Translates to: GFPRSALSIGGRLVGVGTGLKSG*TDAHTG Trigger: GCCTGTGTGAGCATCTGTGCACCCACTCTTCAGCCC...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR CCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATGACCAAGGTGGCAGATaGGTAGGGGCTGAAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KASVLQLHRQHTNFIHTDDQGGR*VGAEEW Trigger: CCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTC...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR GCA 72 bp | GGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATaGTCACACAGGCAGAAGGAGCCGAGGCCAGGATGC | + |
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Preference number: 3 (lower is better) Translates to: GRWVGAEEWVHR*SHRQKEPRPGC Trigger: GCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR GCA 72 bp | TCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTaGCTGCTGTCTGCTTCCCATGGGATACCATGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SGTPVAGVHASP*LLSASHGIPWF Trigger: GAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 72 bp | ACATATCCAGAGAGGGAGACAGAGACTCAGGTAGGATaGGGCTCGGGCACACCTGTGGCCGGTGTCCACGCC | + |
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Preference number: 3 (lower is better) Translates to: TYPERETETQVG*GSGTPVAGVHA Trigger: GGCGTGGACACCGGCCACAGGTGTGCCCGAGCCCCATCCTACCTGAGTCTCTGTCTCCCTCTCTGGATATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR GCA 72 bp | GCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTaGTGTCTGCTTCCCATGGGATACCATGGTTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: AHLWPVSTPLLA*CLLPMGYHGSS Trigger: GCTAGAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 72 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTaGGTGCACAGATGCTCACACAGGCAGAAGGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: SDQGGRWVGAEE*VHRCSHRQKEP Trigger: CGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 72 bp | AAGGCTCCCATGGCCAAGTCAGACCAAGGTGGCAGATaGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KAPMAKSDQGGR*VGAEEWVHRCS Trigger: TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGGAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR GCA 72 bp | TGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTaGTTCCCATGGGATACCATGGTTCTAGCATGGATA | + |
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Preference number: 3 (lower is better) Translates to: CGRCPRLSLPAV*FPWDTMVLAWI Trigger: TATCCATGCTAGAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 72 bp | GCTGTCTGCTTCCCATGGGATACCATGGTTCTAGCATaGATAAAGCAGGGCGAGCCTACCCCTTCCTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: AVCFPWDTMVLA*IKQGEPTPSFP Trigger: AGGGAAGGAAGGGGTAGGCTCGCCCTGCTTTATCCATGCTAGAACCATGGTATCCCATGGGAAGCAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR CCA 72 bp | TGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATaGGATACCATGGTTCTAGCATGGATAAAGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: CPRLSLPAVCFP*DTMVLAWIKQG Trigger: GCCCTGCTTTATCCATGCTAGAACCATGGTATCCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| 3UTR-3UTR CAA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATCCAGTGGTAGCAGGGTaGGGGGAGCTGGGGTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KASVLQLHRQHTNFIHTDPVVAG*GELGFP Trigger: AGGAAACCCCAGCTCCCCCAACCCTGCTACCACTGG...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTCCTGGGCCGCGTCGCTaGACTGGGAGGACACACTGC | + |
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Preference number: 4 (lower is better) Translates to: GSGTPVAGVHASPCLLSAPGPRR*TGRTHC Trigger: GCAGTGTGTCCTCCCAGTTCAGCGACGCGGCCCAGG...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTAAGAGGGGCCGTGCCTaGCCCACTCCTGCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GSGTPVAGVHASPCLLSAKRGRA*PTPAWH Trigger: GTGCCAGGCAGGAGTGGGGCAGGCACGGCCCCTCTT...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGAACTGGGGCTGGCCTaGGCCGCGTCGCTGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTEELGLA*AASLNW Trigger: CCAGTTCAGCGACGCGGCCCAGGCCAGCCCCAGTTC...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTAGCGGTCACACTGTTTaGCACCGTCCTCCACCAACG | + |
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Preference number: 4 (lower is better) Translates to: GSGTPVAGVHASPCLLSASGHTV*HRPPPT Trigger: CGTTGGTGGAGGACGGTGTCAAACAGTGTGACCGCT...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGGGAAGTGGAACTGAGTaGGCGTGCGCGTCTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGGSGTE*ACASPG Trigger: CCCAGGAGACGCGCACGCTCACTCAGTTCCACTTCC...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGTCCGTCCCCACCCCCTaGAGGCCTTGGAAAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTESVPTP*RPWKAL Trigger: CAGGGCTTTCCAAGGCCTGCAGGGGGTGGGGACGGA...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTGACTTTGTGGCCATGTaGTGGCGACACAGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GSGTPVAGVHASPCLLSADFVAM*WRHRSW Trigger: CCAGGACCTGTGTCGCCAGCACATGGCCACAAAGTC...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGAGGAGCCCAGAGGGCTaGGTGTGTGGGGAGGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRRSPEG*VCGEVQ Trigger: CTGAACCTCCCCACACACCCAGCCCTCTGGGCTCCT...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTACTGTGGGCTGGCTCTaGCCCAAGGGACTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSGTPVAGVHASPCLLSATVGWL*PKGLFF Trigger: GAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGT...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGCCCACCACTGTGGGCTaGCTCTGGCCCAAGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTEPTTVG*LWPKGL Trigger: AAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGG...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGAAAGTAGTGTCACCATaGGCCCCCTCCGGCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTEKVVSP*APSGPS Trigger: GCTGGGGCCGGAGGGGGCCCATGGTGACACTACTTT...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGGAGCCTGCCACTCCTTaGCCAACCGGTCCCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVEPATP*PTGPGS Trigger: GGAACCGGGACCGGTTGGCCAAGGAGTGGCAGGCTC...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGCTTCTCCAGAAGGACTaGGGAGGAGCCCAGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTELLQKD*GGAQRA Trigger: AGCCCTCTGGGCTCCTCCTCAGTCCTTCTGGAGAAG...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGGGCCGGAGTGCCCTCTaGCGGCCAGCTGAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWGRSAL*RPAEEV Trigger: CACTTCCTCAGCTGGCCGGCAGAGGGCACTCCGGCC...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGAACCCCCTGCAGGCCTTaGAAAGCCCTGGGCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKSDQGGRWVGAEEWVHRTPCRP*KALGSR Trigger: CCTGCTGCCCAGGGCTTTCCAAGGCCTGCAGGGGGT...TCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGTTCTTCCTGTGCCCTTaGGCAGCAACTGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGFFLCP*AATAAG Trigger: CCCTGCTGCAGTTGCTGCCCAAGGGCACAGGAAGAA...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGAGAGGGCTGGGTGTGTaGGGAGGTTCAGGGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGRGLGV*GGSGKP Trigger: TGGTTTCCCTGAACCTCCCCACACACCCAGCCCTCT...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGGCCGTCCCACCACTGTaGGCTGGCTCTGGCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTAVPPL*AGSGPR Trigger: CCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGC...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGGGCGGCACAGGTGTTTaGCTCTGCTTGGTAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRGGTGV*LCLVGA Trigger: TGCGCCTACCAAGCAGAGCCAAACACCTGTGCCGCC...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGTCCCGGTTCCGAAGGTaGTCCTCCATGTATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGSRFRR*SSMYAR Trigger: TCTGGCATACATGGAGGATCACCTTCGGAACCGGGA...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGTGCCTGCCCCACTCCTaGCTGGCACTGTCCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTECLPHS*LALSKQ Trigger: TTGTTTGGACAGTGCCAGGCAGGAGTGGGGCAGGCA...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGTTGGTGCCCGGGCTCTaGCAGGCACTGGCAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVLVPGL*QALATL Trigger: AAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAA...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGCTCTGGCAACCTTGGTaGCCGGGCTCTGCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWLWQPW*PGSARH Trigger: GTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAG...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGCTCTCCCACACCATCTaGCAGAAGTCCGCGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRLSHTI*QKSAMV Trigger: CACCATCGCGGACTTCTGGCAGATGGTGTGGGAGAG...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGCACCGTCACTGCAGTaGACTATGATGGGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTEAPSLQ*TMMGQE Trigger: CTCCTGCCCCATCATAGTGCACTGCAGTGACGGTGC...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGCGCTGGTCACGGACATaGTCCAGGGTGGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRRWSRT*SRVAAI Trigger: TATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCG...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGTGCCAGGACAAGCCTTaGGACATGAGTTGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTECQDKP*DMSCRS Trigger: GCTCCGGCAACTCATGTCCCAAGGCTTGTCCTGGCA...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGGCTCTGCCAGGCACTaGCAACTCTTGGGCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTEGSARH*QLLGHV Trigger: TACATGGCCCAAGAGTTGCCAGTGCCTGGCAGAGCC...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGATTCTCTGGCAACCTTaGTGCCCGGGCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVILWQP*CPGSAR Trigger: CCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAAT...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGGCAGCACTGAGCGCATaGGAGATATGCCATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGAALSA*EICHGL Trigger: AAGCCCATGGCATATCTCCCATGCGCTCAGTGCTGC...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGCTCCTCGCACCAAGATaGTGTGCTGCTGTGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGLLAPR*CAAVGT Trigger: AGTTCCCACAGCAGCACACCATCTTGGTGCGAGGAG...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGGCCGGATTCGGAAGGTaGCAGCTGGTCCCACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTAGFGR*QLVPPH Trigger: GTGTGGTGGGACCAGCTGTCACCTTCCGAATCCGGC...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGTGGGTAAGGTCATCATaGCAGGACAAGCCTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGWVRSS*QDKPWD Trigger: GTCCCAAGGCTTGTCCTGGCATGATGACCTTACCCA...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGGGTAACAACTCAGCCTaGAGAGAGGACAGTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRGNNSA*REDSGE Trigger: CTCCCCACTGTCCTCTCTGCAGGCTGAGTTGTTACC...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGAGTCCTCTGCCCTGTTaGCCCCATTCTCTGGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVSPLPC*PHSLAT Trigger: GGTTGCCAGAGAATGGGGGCAACAGGGCAGAGGACT...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCCCTTGGGCAGCAACTaGAGCAGGGTCAAGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVPLGSN*SRVKRV Trigger: TACCCTCTTGACCCTGCTGCAGTTGCTGCCCAAGGG...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGGGGCAGAGCTTCTGCTaGGTCTCCTCTCTGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVGQSFC*VSSLHL Trigger: CAGATGCAGAGAGGAGACCCAGCAGAAGCTCTGCCC...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGCAGGAAGCGAGGGTGTaGGGGGCAGAGCTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTQEARV*GAELLL Trigger: CAGCAGAAGCTCTGCCCCCCACACCCTCGCTTCCTG...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGACCAGCCCAGCTTGCTaGGTCACATCTGCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRTSPAC*VTSAKD Trigger: GTCTTTGGCAGATGTGACCCAGCAAGCTGGGCTGGT...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGATCTGGAGCCCTGTCTaGGCTTCCAGTTCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRIWSPV*ASSSDF Trigger: GAAGTCTGAACTGGAAGCGCAGACAGGGCTCCAGAT...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGAGTGAGTCCCCAAAATaGCCTTGGAGGCACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRSESPK*PWRHFC Trigger: GCAGAAGTGCCTCCAAGGCCATTTTGGGGACTCACT...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGAGTACTTCCTCCTCATaGCCCTCTGAAGAGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPVAGVHASPCLLSASHGSTSSS*PSEESS Trigger: AGAGGACTCTTCAGAGGGCCATGAGGAGGAAGTACT...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGTCGGAAGGTGACAGCTaGTCCCACCACACTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRSEGDS*SHHTDV Trigger: AACATCAGTGTGGTGGGACCAGCTGTCACCTTCCGA...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGACAAGTCCAGGCCGCTaGTCACGGACATGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWTSPGR*SRTCSR Trigger: CCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGT...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR TCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGCTCCTCATGGCCCTCTaGAGAGTCCTCTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWLLMAL*RVLCPV Trigger: AACAGGGCAGAGGACTCTTCAGAGGGCCATGAGGAG...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGTCTCCACTTTCAGCTTaGTTCGGGCATGGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTESPLSA*FGHGHR Trigger: CCTATGACCATGCCCGAATCAAGCTGAAAGTGGAGA...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTCTGGTTGTGCTGCTTaGGGAGGGGACTTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWSGCAA*GGDFSP Trigger: TGGGGAGAAGTCCCCTCCCCAAGCAGCACAACCAGA...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGCCTTGGGACATGAGTTaGCGGAGCACACCTTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWPWDMS*RSTPCR Trigger: CCTACAAGGTGTGCTCCGGCAACTCATGTCCCAAGG...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGCTCTACTCCATAGCCTaGCAGTACAGCAGTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GAQMLTQAEGAEARMPTELYSIA*QYSSQS Trigger: AGATTGACTGCTGTACTGGCAGGCTATGGAGTAGAG...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGTTGCTGGGTCACATCTaGCAAAGACAGGTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVLLGHI*QRQVLL Trigger: GAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAA...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGAGCGCATGGGAGATATaGCATGGGCTTGTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTSAWEI*HGLVGE Trigger: TTCCCCGACAAGCCCATGGCATATCTCCCATGCGCT...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGACAGGTGTTTGGCTCTaGTTGGTAGGCGCACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTTGVWL*LVGAQS Trigger: GCTCTGTGCGCCTACCAAGCAGAGCCAAACACCTGT...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | GCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGAACTTCTGCTGAAGAGTaGAGGACCTTCAGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AKSDQGGRWVGAEEWVHRTSAEE*RTFSLG Trigger: TCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGT...TCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCAGCCAAAGACAGGTTCTaGTCATTGTGCCGGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDQGGRWVGAEEWVHRCSAKDRF*SLCRIR Trigger: CCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGC...TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTTCACCAGCCCAGCTTaGTGGGTCACATCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWFTSPA*WVTSAK Trigger: TTTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAA...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGTCACTCCTTTGGCCATaGGATTCAGGACCATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVSLLWP*DSGPCQ Trigger: TTGACATGGTCCTGAATCGCATGGCCAAAGGAGTGA...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGCTGCAGACTCAATTCTaGTTGTGCTGCTTGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWLQTQF*LCCLGR Trigger: CCTCCCCAAGCAGCACAACCAGAATTGAGTCTGCAG...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR GCA 90 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCAACTCAATTCTGGTTGTaGTGCTTGGGGAGGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SDQGGRWVGAEEWVHRCSTQFWL*CLGRGL Trigger: AAGTCCCCTCCCCAAGCAGCACAACCAGAATTGAGT...TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCAAGGTTCTGCTCATTGTaGCGGATTCGGAAGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDQGGRWVGAEEWVHRCSRFCSL*RIRKVT Trigger: TGTCACCTTCCGAATCCGGCACAATGAGCAGAACCT...TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CCA 90 bp | GCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGAGGTAGGAAGTCAGGATaGCGGTTCTTCTTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKSDQGGRWVGAEEWVHRGRKSG*RFFLML Trigger: CAACATCAAGAAGAACCGCCATCCTGACTTCCTACC...TCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTCTCCTTCACTCCTTTaGCCATGCGATTCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWSPSLL*PCDSGP Trigger: TGGTCCTGAATCGCATGGCCAAAGGAGTGAAGGAGA...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGCCAAACAAGCCATCCTaGATACAGACTTCCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPRSALSIGGRLVGVGTPNKPS*IQTSRC Trigger: GCATCTGGAAGTCTGTATTCAGGATGGCTTGTTTGG...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR TCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATAGGCAGGGCTGGCAGTaGGGTACCCAGGAAGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KASVLQLHRQHTNFIHTDRQGWQ*GTQEAR Trigger: CCTCGCTTCCTGGGTACCTCACTGCCAGCCCTGCCT...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGAATACAGACTTCCAGATaGGAACAAAGTCTGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AKSDQGGRWVGAEEWVHRIQTSR*EQSLRS Trigger: TGACCGCAGACTTTGTTCGCATCTGGAAGTCTGTAT...TCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGGCTGGGTCTCCTCTCTaGATCTGTTGTATTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWAGSPL*ICCIVF Trigger: GAAAACAATACAACAGATGCAGAGAGGAGACCCAGC...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATGCCGCGTCGCTGAACTaGGAGGACACACTGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KASVLQLHRQHTNFIHTDAASLN*EDTLLT Trigger: GGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCGGC...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGGTTGGGGGAGCTGGGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGACAGCAGTCAATCTCTaGAGACTCAATTCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRVGGAGVSSFCFVYRWTAVNL*RLNSGC Trigger: ACAACCAGAATTGAGTCTGCAGAGATTGACTGCTGT...CCACCTATAGACAAAGCAGAACGAGGAAACCCCAGCTCCCCCAACCCTGCTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATGGGAAGGACTTCAGCTaGTTCCTCCCTCTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KASVLQLHRQHTNFIHTDGKDFS*FLPLSH Trigger: GTGGGACAGAGGGAGGAAGCAGCTGAAGTCCTTCCC...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATTGTCCCACCCCTGTCTaGAAAATCTGGAGCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KASVLQLHRQHTNFIHTDCPTPV*KIWSPV Trigger: GACAGGGCTCCAGATTTTGCAGACAGGGGTGGGACA...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATCCTGTCTGCAAAATCTaGAGCCCTGTCTGCGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KASVLQLHRQHTNFIHTDPVCKI*SPVCAS Trigger: GGAAGCGCAGACAGGGCTCCAGATTTTGCAGACAGG...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTCACTGGGGCAGGGCCTaGAGGATAGCATTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGTPVAGVHASPCLLSAHWGRA*RIAFTS Trigger: GGAGGTGAATGCTATCCTCAAGGCCCTGCCCCAGTG...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | GTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGAGAGCCTGCCACTCCTaGGCCAACCGGTCCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VHRCSHRQKEPRPGCPLRRACHS*ANRSRF Trigger: GAACCGGGACCGGTTGGCCAAGGAGTGGCAGGCTCT...CCTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 90 bp | TCCGGCCCCAGCGCTGCCAGGCGCTCCTTATCCCGCTGTCTCGAATaGTGGCGCATACACAAGGCCACTGCCAAAGCCACTAGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGPSAARRSLSRCLE*WRIHKATAKATSSP Trigger: TGGGCTGCTAGTGGCTTTGGCAGTGGCCTTGTGTATGCGCCATCATTCGAGACAGCGGGATAAGGAGCGCCTGGCAGCGCTGGGGCCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | GCCGATGGTCGAGCTGATGGCCGTCCCACCACTGTGGGCTGGCTCTaGCCCAAGGGACTTTTCTTCTCCAGAAGGACTGAGGAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADGRADGRPTTVGWL*PKGLFFSRRTEEEP Trigger: GGGCTCCTCCTCAGTCCTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCGACCATCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | GGCTCGGGCACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTGACAGGTTCTGCTCATaGTGCCGGATTCGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGTPVAGVHASPCLLSADRFCS*CRIRKV Trigger: CACCTTCCGAATCCGGCACAATGAGCAGAACCTGTC...AGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGTGCCCGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS GCA 90 bp | CTGCCCTGTTGCCCCCATTCTCTGGCAACCTTGGTGCCCGGGCTCTaGCAGGCACTGGCAACTCTTGGGCCATGTAGAGCAGCCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPCCPHSLATLVPGL*QALATLGPCRAALN Trigger: ATTCAGGGCTGCTCTACATGGCCCAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCAACAGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | TCCTCGGCCGATGGTCGAGCTGATGGCCGTCCCACCACTGTGGGCTaGCTCTGGCCCAAGGGACTTTTCTTCTCCAGAAGGACTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSADGRADGRPTTVG*LWPKGLFFSRRTEE Trigger: CTCCTCAGTCCTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCGACCATCGGCCGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGCACCCCCTGCAGGCCTaGGAAAGCCCTGGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFPRSALSIGGRLVGVGTHPLQA*ESPGQQ Trigger: CTGCTGCCCAGGGCTTTCCAAGGCCTGCAGGGGGTG...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 90 bp | CCAGCAGCCTCACTCCAGCCACCAGGCTCAGGGGTTTCTGGTCAGTaGCGATATAGCCATACTCCTCGGCCGATGGTCGAGCTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAASLQPPGSGVSGQ*RYSHTPRPMVELMA Trigger: GGCCATCAGCTCGACCATCGGCCGAGGAGTATGGCTATATCGTCACTGACCAGAAACCCCTGAGCCTGGTGGCTGGAGTGAGGCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | GACAAGCCTTGGGACATGAGTTGCCGGAGCACACCTTGTAGGCGCTaGAGAACTGGGGAAGTGACTTGTAAGAGGGGCCGTGCCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DKPWDMSCRSTPCRR*RTGEVTCKRGRACP Trigger: GGGGCAGGCACGGCCCCTCTTACAAGTCACTTCCCCAGTTCTCCAGCGCCTACAAGGTGTGCTCCGGCAACTCATGTCCCAAGGCTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027404.12 ENSMUST00000186178.7 ENSMUST00000189769.7 |
||
| CDS CCA 90 bp | CATACTCCTCGGCCGATGGTCGAGCTGATGGCCGTCCCACCACTGTaGGCTGGCTCTGGCCCAAGGGACTTTTCTTCTCCAGAAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: HTPRPMVELMAVPPL*AGSGPRDFSSPEGL Trigger: CAGTCCTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCGACCATCGGCCGAGGAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | CGCGTCGCTGAACTGGGAGGACACACTGCTCACCCTAGAAGGCTCTaGCTGACCCTCCGCCCGGTTAAACAGGGACTTTGTGGCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVAELGGHTAHPRRL*LTLRPVKQGLCGHV Trigger: CACATGGCCACAAAGTCCCTGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCAGTTCAGCGACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGAGGCACTGGCAACTCTaGGGCCATGTAGAGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVRHWQL*GHVEQP Trigger: GGGCTGCTCTACATGGCCCAAGAGTTGCCAGTGCCT...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCACGGCGGCACAGGTGTTaGGCTCTGCTTGGTAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SDQGGRWVGAEEWVHRCSRRHRC*ALLGRR Trigger: GCGCCTACCAAGCAGAGCCAAACACCTGTGCCGCCG...TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 90 bp | GAGGCACTTCTGCTGAAGAGTGCAGGACCTTCAGCCTTGGACAGGTaGCCAACACCAACTACCCCAGAGGAGCTCTCTGAGCCCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EALLLKSAGPSALDR*PTPTTPEELSEPRE Trigger: CTCCCGGGGCTCAGAGAGCTCCTCTGGGGTAGTTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 90 bp | TCGCTGAACTGGGAGGACACACTGCTCACCCTAGAAGGCTCTGGCTaGCCCTCCGCCCGGTTAAACAGGGACTTTGTGGCCATGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLNWEDTLLTLEGSG*PSARLNRDFVAMCW Trigger: CCAGCACATGGCCACAAAGTCCCTGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCAGTTCAGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | AGGGACTTTTCTTCTCCAGAAGGACTGAGGAGGAGCCCAGAGGGCTaGGTGTGTGGGGAGGTTCAGGGAAACCAGGGCTCAGCACCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDFSSPEGLRRSPEG*VCGEVQGNQGSAPA Trigger: AGCAGGTGCTGAGCCCTGGTTTCCCTGAACCTCCCCACACACCCAGCCCTCTGGGCTCCTCCTCAGTCCTTCTGGAGAAGAAAAGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGCATTCTCTGGCAACCTaGGTGCCCGGGCTCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFPRSALSIGGRLVGVGTHSLAT*VPGLCQ Trigger: CTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATG...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGCAGACTCAATTCTGGTaGTGCTGCTTGGGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GAQMLTQAEGAEARMPTEQTQFW*CCLGRG Trigger: TCCCCTCCCCAAGCAGCACAACCAGAATTGAGTCTG...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS-3UTR CAA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGCCCACCACACTGATGTaGATAAAGCTACCGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TPVAGVHASPCLLSASHGPTTLM*IKLPED Trigger: GTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGG...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | ACACCTGTGGCCGGTGTCCACGCCTCTCCTTGCCTGCTGTCTGCTTCCCATGGGATCTCCTTCACTCCTTaGGCCATGCGATTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TPVAGVHASPCLLSASHGISFTP*AMRFRT Trigger: GGTCCTGAATCGCATGGCCAAAGGAGTGAAGGAGAT...CCCATGGGAAGCAGACAGCAGGCAAGGAGAGGCGTGGACACCGGCCACAGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | TCCTCCCTCTGTCCCACCCCTGTCTGCAAAATCTGGAGCCCTGTCTaGGCTTCCAGTTCAGACTTCACCAGCCCAGCTTGCTGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSLCPTPVCKIWSPV*ASSSDFTSPACWVT Trigger: TGTGACCCAGCAAGCTGGGCTGGTGAAGTCTGAACTGGAAGCGCAGACAGGGCTCCAGATTTTGCAGACAGGGGTGGGACAGAGGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 90 bp | AGGGCCACTAGAGTAAGCAGCACTGAGCGCATGGGAGATATGCCATaGGCTTGTCGGGGAAGGACTTCAGCTGCTTCCTCCCTCTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RATRVSSTERMGDMP*ACRGRTSAASSLCP Trigger: GGGACAGAGGGAGGAAGCAGCTGAAGTCCTTCCCCGACAAGCCCATGGCATATCTCCCATGCGCTCAGTGCTGCTTACTCTAGTGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | CCCATGGCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGGTCCCCAAAATGGCCTaGGAGGCACTTCTGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PMAKSDQGGRWVGAEEWVVPKMA*EALLLK Trigger: CTTCAGCAGAAGTGCCTCCAAGGCCATTTTGGGGAC...CACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGCCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | TCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGATGCTCATTCTGGTTGTGCTGCTaGGGGAGGGGACTTCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDQGGRWVGAEEWVHRCSFWLCC*GRGLLP Trigger: GGGGAGAAGTCCCCTCCCCAAGCAGCACAACCAGAA...TGAGCATCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | GCCAAGTCAGACCAAGGTGGCAGATGGGTAGGGGCTGAAGAGTGGGTGCACAGACTTCACCAGCCCAGCTaGCTGGGTCACATCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AKSDQGGRWVGAEEWVHRLHQPS*LGHICQ Trigger: TTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAAG...TCTGTGCACCCACTCTTCAGCCCCTACCCATCTGCCACCTTGGTCTGACTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | GGGTTTCCTCGTTCTGCTTTGTCTATAGGTGGTAGGCTGGTGGGAGTGGGGACGATGCCAGGACAAGCCTaGGGACATGAGTTGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GFPRSALSIGGRLVGVGTMPGQA*GHELPE Trigger: CTCCGGCAACTCATGTCCCAAGGCTTGTCCTGGCAT...CGTCCCCACTCCCACCAGCCTACCACCTATAGACAAAGCAGAACGAGGAAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGGGATGGCGGTTCTTCTaGATGTTGCTCTCATCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GAQMLTQAEGAEARMPTEGWRFF*MLLSSC Trigger: ACAGGATGAGAGCAACATCAAGAAGAACCGCCATCC...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | CCCACCACACTGATGTTGATAAAGCTACCGGAGGACATATGCACGTaGTCAGCCAGAATCTCCAGCAGCCTCACTCCAGCCACCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTTLMLIKLPEDICT*SARISSSLTPATRL Trigger: GAGCCTGGTGGCTGGAGTGAGGCTGCTGGAGATTCTGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | GCTGGTCCCACCACACTGATGTTGATAAAGCTACCGGAGGACATATaGACGTGCTCAGCCAGAATCTCCAGCAGCCTCACTCCAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGPTTLMLIKLPEDI*TCSARISSSLTPAT Trigger: GGTGGCTGGAGTGAGGCTGCTGGAGATTCTGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGGACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | TTCACCAGCCCAGCTTGCTGGGTCACATCTGCCAAAGACAGGTTCTaGTCATTGTGCCGGATTCGGAAGGTGACAGCTGGTCCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: FTSPACWVTSAKDRF*SLCRIRKVTAGPTT Trigger: TGTGGTGGGACCAGCTGTCACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 90 bp | TTCGGGCATGGTCATAGGGTAGGAAGTCAGGATGGCGGTTCTTCTTaGTGTTGCTCTCATCCTGTGCGGCGGCACAGGTGTTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FGHGHRVGSQDGGSS*CCSHPVRRHRCLAL Trigger: CAGAGCCAAACACCTGTGCCGCCGCACAGGATGAGAGCAACATCAAGAAGAACCGCCATCCTGACTTCCTACCCTATGACCATGCCCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | AGAGTGAGTCCCCAAAATGGCCTTGGAGGCACTTCTGCTGAAGAGTaGAGGACCTTCAGCCTTGGACAGGTGACCAACACCAACTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSPQNGLGGTSAEE*RTFSLGQVTNTNYP Trigger: GGGGTAGTTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGTGCCTCCAAGGCCATTTTGGGGACTCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | CCAGCTTGCTGGGTCACATCTGCCAAAGACAGGTTCTGCTCATTGTaGCGGATTCGGAAGGTGACAGCTGGTCCCACCACACTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PACWVTSAKDRFCSL*RIRKVTAGPTTLML Trigger: CAACATCAGTGTGGTGGGACCAGCTGTCACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | AACTGGTCCTTAGAACGGACAAGTCCAGGCCGCTGGTCACGGACATaGTCCAGGGTGGCAGCAATATCAATCTCCTTCACTCCTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NWSLERTSPGRWSRT*SRVAAISISFTPLA Trigger: GGCCAAAGGAGTGAAGGAGATTGATATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGTCCGTTCTAAGGACCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 90 bp | AGTGTCCAGAGTGAGTCCCCAAAATGGCCTTGGAGGCACTTCTGCTaGAGAGTGCAGGACCTTCAGCCTTGGACAGGTGACCAACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SVQSESPKWPWRHFC*RVQDLQPWTGDQHQ Trigger: TTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGTGCCTCCAAGGCCATTTTGGGGACTCACTCTGGACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS-3UTR CAA 90 bp | GGTGCACAGATGCTCACACAGGCAGAAGGAGCCGAGGCCAGGATGCCCACTGAGTCCTCTCTGCATCTGTaGTATTGTTTTCTTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: GAQMLTQAEGAEARMPTESSLHL*YCFLDI Trigger: GATGTCAAGAAAACAATACAACAGATGCAGAGAGGA...CTCAGTGGGCATCCTGGCCTCGGCTCCTTCTGCCTGTGTGAGCATCTGTGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 90 bp | AGAAAACTGCTCCGGGGTCAACTGACGCAGCTCTACTCCATAGCCTaGCAGTACAGCAGTCAATCTCTGCAGACTCAATTCTGGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKLLRGQLTQLYSIA*QYSSQSLQTQFWLC Trigger: GCACAACCAGAATTGAGTCTGCAGAGATTGACTGCTGTACTGGCAGGCTATGGAGTAGAGCTGCGTCAGTTGACCCCGGAGCAGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS GCA 90 bp | CAAACAAGCCATCCTGAATACAGACTTCCAGATGCGAACAAAGTCTaGGGTCAAACAGACAGCCCGAGCTTCTTGCTTTTGCGACGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTSHPEYRLPDANKV*GQTDSPSFLLLRRF Trigger: GAAGCGTCGCAAAAGCAAGAAGCTCGGGCTGTCTGTTTGACCGCAGACTTTGTTCGCATCTGGAAGTCTGTATTCAGGATGGCTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189769.7 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCCGTGTTGCAGCTGCACAGACAACACACTAACTTTATTCACACTGATAGATATGCCATGGGCTaGTCGGGGAAGGACTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KASVLQLHRQHTNFIHTDRYAMG*SGKDFS Trigger: GCTGAAGTCCTTCCCCGACAAGCCCATGGCATATCT...ATCAGTGTGAATAAAGTTAGTGTGTTGTCTGTGCAGCTGCAACACGGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 90 bp | GAGCTTCTGCTGGGTCTCCTCTCTGCATCTGTTGTATTGTTTTCTTaGCATCGGCTCCTCCAACATTTACAGCCCCTTCAAGATTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELLLGLLSASVVLFS*HRLLQHLQPLQDFF Trigger: GAAGAAATCTTGAAGGGGCTGTAAATGTTGGAGGAGCCGATGTCAAGAAAACAATACAACAGATGCAGAGAGGAGACCCAGCAGAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS GCA 72 bp | CTCTGCCCTGTTGCCCCCATTCTCTGGCAACCTTGGTaGCCGGGCTCTGCCAGGCACTGGCAACTCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCPVAPILWQPW*PGSARHWQLLG Trigger: GCCCAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCAACAGGGCAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 72 bp | GTCCTCTGCCCTGTTGCCCCCATTCTCTGGCAACCTTaGTGCCCGGGCTCTGCCAGGCACTGGCAACTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLCPVAPILWQP*CPGSARHWQLL Trigger: CAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCAACAGGGCAGAGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CCA 72 bp | CGGCCGATGGTCGAGCTGATGGCCGTCCCACCACTGTaGGCTGGCTCTGGCCCAAGGGACTTTTCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPMVELMAVPPL*AGSGPRDFSSP Trigger: TGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCGACCATCGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS CAA 90 bp | CCTAGTACTTCCTCCTCATGGCCCTCTGAAGAGTCCTCTGCCCTGTaGCCCCCATTCTCTGGCAACCTTGGTGCCCGGGCTCTGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSTSSSWPSEESSAL*PPFSGNLGARALPG Trigger: GCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCAACAGGGCAGAGGACTCTTCAGAGGGCCATGAGGAGGAAGTACTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 72 bp | CAGGTGACCAACACCAACTACCCCAGAGGAGCTCTCTaGGCCCCGGGAGCCATCTCGGGAGCCAAACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVTNTNYPRGAL*APGAISGAKLV Trigger: CACCAGTTTGGCTCCCGAGATGGCTCCCGGGGCTCAGAGAGCTCCTCTGGGGTAGTTGGTGTTGGTCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS TCA 72 bp | TGGGGAGGTTCAGGGAAACCAGGGCTCAGCACCTGCTaGACTTCGCTGGAGGCAGGGCTGGCAGTGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WGGSGKPGLSTC*TSLEAGLAVRY Trigger: GTACCTCACTGCCAGCCCTGCCTCCAGCGAAGTTCAGCAGGTGCTGAGCCCTGGTTTCCCTGAACCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
||
| CDS GCA 72 bp | TGCCCCCATTCTCTGGCAACCTTGGTGCCCGGGCTCTaGCAGGCACTGGCAACTCTTGGGCCATGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: CPHSLATLVPGL*QALATLGPCRA Trigger: TGCTCTACATGGCCCAAGAGTTGCCAGTGCCTGGCAGAGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 72 bp | TCCTCCTCATGGCCCTCTGAAGAGTCCTCTGCCCTGTaGCCCCCATTCTCTGGCAACCTTGGTGCCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSWPSEESSAL*PPFSGNLGARA Trigger: AGCCCGGGCACCAAGGTTGCCAGAGAATGGGGGCAACAGGGCAGAGGACTCTTCAGAGGGCCATGAGGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 72 bp | TGGGAGGACACACTGCTCACCCTAGAAGGCTCTGGCTaGCCCTCCGCCCGGTTAAACAGGGACTTTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: WEDTLLTLEGSG*PSARLNRDFVA Trigger: GGCCACAAAGTCCCTGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CCA 72 bp | TCTTCTCCAGAAGGACTGAGGAGGAGCCCAGAGGGCTaGGTGTGTGGGGAGGTTCAGGGAAACCAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSPEGLRRSPEG*VCGEVQGNQGS Trigger: TGAGCCCTGGTTTCCCTGAACCTCCCCACACACCCAGCCCTCTGGGCTCCTCCTCAGTCCTTCTGGAGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CCA 72 bp | CGAGCTGATGGCCGTCCCACCACTGTGGGCTGGCTCTaGCCCAAGGGACTTTTCTTCTCCAGAAGGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: RADGRPTTVGWL*PKGLFFSRRTE Trigger: CTCAGTCCTTCTGGAGAAGAAAAGTCCCTTGGGCCAGAGCCAGCCCACAGTGGTGGGACGGCCATCAGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 72 bp | AGCGCTGCCAGGCGCTCCTTATCCCGCTGTCTCGAATaGTGGCGCATACACAAGGCCACTGCCAAAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: SAARRSLSRCLE*WRIHKATAKAT Trigger: AGTGGCTTTGGCAGTGGCCTTGTGTATGCGCCATCATTCGAGACAGCGGGATAAGGAGCGCCTGGCAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | AGAACTGGGGAAGTGACTTGTAAGAGGGGCCGTGCCTaGCCCACTCCTGCCTGGCACTGTCCAAACAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RTGEVTCKRGRA*PTPAWHCPNKP Trigger: TGGCTTGTTTGGACAGTGCCAGGCAGGAGTGGGGCAGGCACGGCCCCTCTTACAAGTCACTTCCCCAGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027404.12 ENSMUST00000186178.7 ENSMUST00000189769.7 |
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| CDS TCA 72 bp | TCACTCCAGCCACCAGGCTCAGGGGTTTCTGGTCAGTaGCGATATAGCCATACTCCTCGGCCGATGGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SLQPPGSGVSGQ*RYSHTPRPMVE Trigger: CTCGACCATCGGCCGAGGAGTATGGCTATATCGTCACTGACCAGAAACCCCTGAGCCTGGTGGCTGGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CCA 72 bp | TGGGACATGAGTTGCCGGAGCACACCTTGTAGGCGCTaGAGAACTGGGGAAGTGACTTGTAAGAGGGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: WDMSCRSTPCRR*RTGEVTCKRGR Trigger: ACGGCCCCTCTTACAAGTCACTTCCCCAGTTCTCCAGCGCCTACAAGGTGTGCTCCGGCAACTCATGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027404.12 ENSMUST00000186178.7 ENSMUST00000189769.7 |
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| CDS CCA 72 bp | GAACTGGGAGGACACACTGCTCACCCTAGAAGGCTCTaGCTGACCCTCCGCCCGGTTAAACAGGGACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ELGGHTAHPRRL*LTLRPVKQGLC Trigger: ACAAAGTCCCTGTTTAACCGGGCGGAGGGTCAGCCAGAGCCTTCTAGGGTGAGCAGTGTGTCCTCCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 90 bp | AGCCCAGCTTGCTGGGTCACATCTGCCAAAGACAGGTTCTGCTCATaGTGCCGGATTCGGAAGGTGACAGCTGGTCCCACCACACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SPACWVTSAKDRFCS*CRIRKVTAGPTTLM Trigger: CATCAGTGTGGTGGGACCAGCTGTCACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 72 bp | CTGCTGAAGAGTGCAGGACCTTCAGCCTTGGACAGGTaGCCAACACCAACTACCCCAGAGGAGCTCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLKSAGPSALDR*PTPTTPEELSE Trigger: CTCAGAGAGCTCCTCTGGGGTAGTTGGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | CCCCAAAATGGCCTTGGAGGCACTTCTGCTGAAGAGTaGAGGACCTTCAGCCTTGGACAGGTGACCAACACC | + |
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Preference number: 6 (lower is better) Translates to: PQNGLGGTSAEE*RTFSLGQVTNT Trigger: GGTGTTGGTCACCTGTCCAAGGCTGAAGGTCCTGCACTCTTCAGCAGAAGTGCCTCCAAGGCCATTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | CCCTCCGCCCGGTTAAACAGGGACTTTGTGGCCATGTaGTGGCGACACAGGTCCTGGTACTCAAAAGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: PSARLNRDFVAM*WRHRSWYSKVV Trigger: CACTACTTTTGAGTACCAGGACCTGTGTCGCCAGCACATGGCCACAAAGTCCCTGTTTAACCGGGCGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | AGGATGGCGGTTCTTCTTGATGTTGCTCTCATCCTGTaGGGCGGCACAGGTGTTTGGCTCTGCTTGGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: RMAVLLDVALIL*GGTGVWLCLVG Trigger: GCCTACCAAGCAGAGCCAAACACCTGTGCCGCCGCACAGGATGAGAGCAACATCAAGAAGAACCGCCATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 72 bp | TGCTGGGTCACATCTGCCAAAGACAGGTTCTGCTCATaGTGCCGGATTCGGAAGGTGACAGCTGGTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: CWVTSAKDRFCS*CRIRKVTAGPT Trigger: GGTGGGACCAGCTGTCACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 72 bp | GGTCATAGGGTAGGAAGTCAGGATGGCGGTTCTTCTTaGTGTTGCTCTCATCCTGTGCGGCGGCACAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GHRVGSQDGGSS*CCSHPVRRHRC Trigger: ACACCTGTGCCGCCGCACAGGATGAGAGCAACATCAAGAAGAACCGCCATCCTGACTTCCTACCCTATGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | CCTTCAAGATTTCTTCCTGTGCCCTTGGGCAGCAACTaGAGCAGGGTCAAGAGGGTAGAAAACTGCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRFLPVPLGSN*SRVKRVENCSG Trigger: CCCGGAGCAGTTTTCTACCCTCTTGACCCTGCTGCAGTTGCTGCCCAAGGGCACAGGAAGAAATCTTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | TGGGTCACATCTGCCAAAGACAGGTTCTGCTCATTGTaGCGGATTCGGAAGGTGACAGCTGGTCCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: WVTSAKDRFCSL*RIRKVTAGPTT Trigger: TGTGGTGGGACCAGCTGTCACCTTCCGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CCA 72 bp | TCAAACTGGTCCTTAGAACGGACAAGTCCAGGCCGCTaGTCACGGACATGCTCCAGGGTGGCAGCAATATCA | + |
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Preference number: 6 (lower is better) Translates to: SNWSLERTSPGR*SRTCSRVAAIS Trigger: TGATATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGTCCGTTCTAAGGACCAGTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | CTCCGGGGTCAACTGACGCAGCTCTACTCCATAGCCTaGCAGTACAGCAGTCAATCTCTGCAGACTCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LRGQLTQLYSIA*QYSSQSLQTQF Trigger: GAATTGAGTCTGCAGAGATTGACTGCTGTACTGGCAGGCTATGGAGTAGAGCTGCGTCAGTTGACCCCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | CTGATGTTGATAAAGCTACCGGAGGACATATGCACGTaGTCAGCCAGAATCTCCAGCAGCCTCACTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LMLIKLPEDICT*SARISSSLTPA Trigger: GGCTGGAGTGAGGCTGCTGGAGATTCTGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | TTCAGACTTCACCAGCCCAGCTTGCTGGGTCACATCTaGCAAAGACAGGTTCTGCTCATTGTGCCGGATTCG | + |
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Preference number: 6 (lower is better) Translates to: FRLHQPSLLGHI*QRQVLLIVPDS Trigger: CGAATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTGACCCAGCAAGCTGGGCTGGTGAAGTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | TTAGAACGGACAAGTCCAGGCCGCTGGTCACGGACATaGTCCAGGGTGGCAGCAATATCAATCTCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LERTSPGRWSRT*SRVAAISISFT Trigger: AGTGAAGGAGATTGATATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGGCCTGGACTTGTCCGTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 90 bp | GCTCCTCCAACATTTACAGCCCCTTCAAGATTTCTTCCTGTGCCCTaGGGCAGCAACTGCAGCAGGGTCAAGAGGGTAGAAAACTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: APPTFTAPSRFLPVP*GSNCSRVKRVENCS Trigger: GGAGCAGTTTTCTACCCTCTTGACCCTGCTGCAGTTGCTGCCCAAGGGCACAGGAAGAAATCTTGAAGGGGCTGTAAATGTTGGAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS TCA 72 bp | AATCACTCCGAGAAGGGCTGCTCTCCACTTTCAGCTTaGTTCGGGCATGGTCATAGGGTAGGAAGTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: NHSEKGCSPLSA*FGHGHRVGSQD Trigger: ATCCTGACTTCCTACCCTATGACCATGCCCGAATCAAGCTGAAAGTGGAGAGCAGCCCTTCTCGGAGTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS GCA 72 bp | ACCACACTGATGTTGATAAAGCTACCGGAGGACATATaGACGTGCTCAGCCAGAATCTCCAGCAGCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: TTLMLIKLPEDI*TCSARISSSLT Trigger: AGTGAGGCTGCTGGAGATTCTGGCTGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 72 bp | ATTCGGAAGGTGACAGCTGGTCCCACCACACTGATGTaGATAAAGCTACCGGAGGACATATGCACGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: IRKVTAGPTTLM*IKLPEDICTCS Trigger: TGAGCACGTGCATATGTCCTCCGGTAGCTTTATCAACATCAGTGTGGTGGGACCAGCTGTCACCTTCCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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| CDS CAA 72 bp | GCTGGGTCTCCTCTCTGCATCTGTTGTATTGTTTTCTaGACATCGGCTCCTCCAACATTTACAGCCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AGSPLCICCIVF*TSAPPTFTAPS Trigger: TGAAGGGGCTGTAAATGTTGGAGGAGCCGATGTCAAGAAAACAATACAACAGATGCAGAGAGGAGACCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027404.12 |
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