RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRK (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019889

Ensembl transcript IDs: ENSMUST00000166468.2, ENSMUST00000218276.2, ENSMUST00000218359.2, ENSMUST00000220357.2

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTaGTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: TPYIKISRCSNRYNS*WLNRRMDFCLDALQ
Trigger: TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTaGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATA +
Preference number: 1 (lower is better)
Translates to: PYIKISRCSNRYNSC*LNRRMDFCLDALQI
Trigger: TATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
3UTR GCA 90 bp GGTAATATTCCACATTGGGCAAGCTACCTGCAATGTCCTCTGCTGTaGAGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATG +
Preference number: 1 (lower is better)
Translates to: GNIPHWASYLQCPLL*RFLIGNHQAIIYLM
Trigger: CATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCTGCACAGCAGAGGACATTGCAGGTAGCTTGCCCAATGTGGAATATTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR-3UTR GCA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGGGATTTCTGCTTGGATaGTCTGCAAATAGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWGFLLG*SANSLS
Trigger: GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCC...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
3UTR CAA 90 bp GAGACCACACATCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTaGTGCTTGGAAACATCAAAAAGAACACTGCGCCGCTACGGTGGC +
Preference number: 2 (lower is better)
Translates to: ETTHLFALSIVETQS*CLETSKRTLRRYGG
Trigger: GCCACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGATGTGTGGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR-3UTR CCA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAAAGAGAAAAGGCTGTGTaGTCACTGGACAGACACAGA +
Preference number: 2 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKREKAV*SLDRHR
Trigger: TCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCT...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR-3UTR TCA 90 bp TATGTGGGGCACATGAATGAGACCACACATCTATTTGCACTGTCTATTGTAGAACAACAACAACAAAAATaGTTGTGTGGCGGTAGTATT +
Preference number: 2 (lower is better)
Translates to: YVGHMNETTHLFALSIVEQQQQK*LCGGSI
Trigger: AATACTACCGCCACACAATCATTTTTGTTGTTGTTG...TTCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR CCA 72 bp CTACAGAAAGCAGGAGAGAAAAGGCTGTGTGGTCACTaGACAGACACAGACCACTTCTCATCCAAATCTGCC +
Preference number: 3 (lower is better)
Translates to: LQKAGEKRLCGH*TDTDHFSSKSA
Trigger: GGCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR GCA 72 bp AATGCCACTTACAAAGTGCATGCAATGTGTGGTAGCTaGTCTACAGAAAGCAGGAGAGAAAAGGCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: NATYKVHAMCGS*STESRREKAVW
Trigger: CCACACAGCCTTTTCTCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR CCA 72 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTaGCTCAACAGACGAATGGATTTCTGCTTGGATGCT +
Preference number: 3 (lower is better)
Translates to: KISRCSNRYNSC*LNRRMDFCLDA
Trigger: AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
3UTR GCA 72 bp CCCAAAGCTTGTGCTTGGAAACATCAAAAAGAACACTaGGCCGCTACGGTGGCAGTTTATACTCTGCTAAAA +
Preference number: 3 (lower is better)
Translates to: PKACAWKHQKEH*AATVAVYTLLK
Trigger: TTTTAGCAGAGTATAAACTGCCACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR TCA 72 bp GAGGATGTGACACTACAGCTATGTGGGGCACATGAATaGGACCACACATCTATTTGCACTGTCTATTGTAGA +
Preference number: 3 (lower is better)
Translates to: EDVTLQLCGAHE*DHTSICTVYCR
Trigger: TCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATAGCTGTAGTGTCACATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR GCA 72 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTaGTGGCTCAACAGACGAATGGATTTCTGCTTGGAT +
Preference number: 3 (lower is better)
Translates to: IKISRCSNRYNS*WLNRRMDFCLD
Trigger: ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
3UTR GCA 72 bp CTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTaGTTGGAAACATCAAAAAGAACACTGCGCCGCTAC +
Preference number: 3 (lower is better)
Translates to: LFALSIVETQSL*LETSKRTLRRY
Trigger: GTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR-3UTR CAA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGATGACTTTGCACAGCTaGTTTCCTTCCCCATTCTTA +
Preference number: 3 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGEMTLHS*FPSPFL
Trigger: TAAGAATGGGGAAGGAAACAAGCTGTGCAAAGTCAT...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
3UTR CCA 72 bp CATCCAAATCTGCCTCTGATTAAAGATAAAATTAGGTaGCATGAAATGTGGATGCTCTCATACAGTCACAGA +
Preference number: 3 (lower is better)
Translates to: HPNLPLIKDKIR*HEMWMLSYSHR
Trigger: TCTGTGACTGTATGAGAGCATCCACATTTCATGCCACCTAATTTTATCTTTAATCAGAGGCAGATTTGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGGTTGTCACCCACGGTaGAGGGAGCAGGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFGCHPR*REQARE
Trigger: TTCCCGAGCCTGCTCCCTTCACCGTGGGTGACAACC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATGGCCACCCTGATGGCTaGGTGCAGCTGTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDGHPDG*VQLSCL
Trigger: CAGACAGGACAGCTGCACCCAGCCATCAGGGTGGCC...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGGTTGTCACCCACGGTaGAGGGAGCAGGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAGCHPR*REQARE
Trigger: TTCCCGAGCCTGCTCCCTTCACCGTGGGTGACAACC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCGGACTCCCAGTCCACTaGAATGCGCCTTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGGLPVH*NAPCLD
Trigger: ATCCAGGCAAGGCGCATTGCAGTGGACTGGGAGTCC...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGATCAGTGGTGGTCCTaGCAGCCCAGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFDQWWS*QPSSPF
Trigger: GAAGGGGGAACTGGGCTGCCAGGACCACCACTGATC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTTCCTTGGAGGGATTTaGCTGGCACAGGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVFLGGI*LAQARA
Trigger: TGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAATTCCTTGGAGGGATTTaGCTGGCACAGGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQFLGGI*LAQARA
Trigger: TGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAA...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTTCCTTGGAGGGATTTaGCTGGCACAGGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSFLGGI*LAQARA
Trigger: TGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGGTTGTCACCCACGGTaGAGGGAGCAGGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDGCHPR*REQARE
Trigger: TTCCCGAGCCTGCTCCCTTCACCGTGGGTGACAACC...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACCAGGCACTTCTCGATaGGAAGCCCAGCCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSPGTSR*EAQPRY
Trigger: GTACCTAGGCTGGGCTTCTCATCGAGAAGTGCCTGG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGGACTCCCAGTCCACTaGAATGCGCCTTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSGLPVH*NAPCLD
Trigger: ATCCAGGCAAGGCGCATTGCAGTGGACTGGGAGTCC...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGGGACTCCCAGTCCACTaGAATGCGCCTTGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALGLPVH*NAPCLD
Trigger: ATCCAGGCAAGGCGCATTGCAGTGGACTGGGAGTCC...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCACCAAGCAGTCTGCCCTaGTCTCATTGTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSPSSLP*SHCGHG
Trigger: TCCGTGGCCACAATGAGAGCAGGGCAGACTGCTTGG...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTAGGGGGTCTTCTGCATaGAGGGTGCTCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIRGSSA*RVLWSA
Trigger: TGCTGACCAGAGCACCCTGCATGCAGAAGACCCCCT...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGAGGGGGTCTTCTGCATaGAGGGTGCTCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWRGSSA*RVLWSA
Trigger: TGCTGACCAGAGCACCCTGCATGCAGAAGACCCCCT...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCACAGAACATGCCACTaGGCCCACCGCCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFHRTCH*AHRHSS
Trigger: GCTTGAATGGCGGTGGGCGCAGTGGCATGTTCTGTG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCTATGGCACAGAACATaGCACTGCGCCCACCGCCAT +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLLWHRT*HCAHRH
Trigger: ATGGCGGTGGGCGCAGTGGCATGTTCTGTGCCATAG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCTATGGCACAGAACATaGCACTGCGCCCACCGCCAT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDLWHRT*HCAHRH
Trigger: ATGGCGGTGGGCGCAGTGGCATGTTCTGTGCCATAG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCCCAACACCAAGCAGCTaGGGAGGAGCAATGGGTCTA +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGPTPSS*GGAMGL
Trigger: TAGACCCATTGCTCCTCCCCAGCTGCTTGGTGTTGG...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCCCAACACCAAGCAGCTaGGGAGGAGCAATGGGTCTA +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCPTPSS*GGAMGL
Trigger: TAGACCCATTGCTCCTCCCCAGCTGCTTGGTGTTGG...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp GCCACTTACAAAGTGCATGCAATGTGTGGTAGCTGCTCTACAGAAAGCAGGAGAGATCAGTGGTGGTCCTaGCAGCCCAGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: ATYKVHAMCGSCSTESRRDQWWS*QPSSPF
Trigger: GAAGGGGGAACTGGGCTGCCAGGACCACCACTGATC...TCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACGATCAGTGGTGGTCCTaGCAGCCCAGTTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNDQWWS*QPSSPF
Trigger: GAAGGGGGAACTGGGCTGCCAGGACCACCACTGATC...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCCGTTCTAGTGATCAGTaGTGGTCCTGGCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGRSSDQ*WSWQPS
Trigger: ACTGGGCTGCCAGGACCACCACTGATCACTAGAACG...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCCTGGTAGCATTCCATaGCCCCTGCTTCACGCTTCG +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWPGSIP*PLLHAS
Trigger: CGAAGCGTGAAGCAGGGGCCATGGAATGCTACCAGG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGGCCACCCTGATGGCTaGGTGCAGCTGTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDGHPDG*VQLSCL
Trigger: CAGACAGGACAGCTGCACCCAGCCATCAGGGTGGCC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGGCCACCCTGATGGCTaGGTGCAGCTGTCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTGHPDG*VQLSCL
Trigger: CAGACAGGACAGCTGCACCCAGCCATCAGGGTGGCC...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTGCAGTGTACGACAATaGGCCCAGCACTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWICSVRQ*AQHWEG
Trigger: ACCCTCCCAGTGCTGGGCCCATTGTCGTACACTGCA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGGCCAGTACTGTaGGCAGCCCTGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDFWPVL*AALRQV
Trigger: GACCTGTCTCAGGGCTGCCCACAGTACTGGCCAGAA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATGGTTCACAACATGCTaGGGGGCTTTGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSWFTTC*GALGSM
Trigger: CATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCA...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGGTTCACAACATGCTaGGGGGCTTTGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFWFTTC*GALGSM
Trigger: CATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACCCAGGCACTTCTCGATaGGAAGCCCAGCCTAGGTAC +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNPGTSR*EAQPRY
Trigger: GTACCTAGGCTGGGCTTCTCATCGAGAAGTGCCTGG...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCCATTGGGCCAAAAGGTaGTCACAGCTAGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGHWAKR*SQLVQP
Trigger: GGGCTGAACTAGCTGTGAGCACCTTTTGGCCCAATG...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR GCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCCAAGCAGTCTGCCCTaGTCTCATTGTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLPSSLP*SHCGHG
Trigger: TCCGTGGCCACAATGAGAGCAGGGCAGACTGCTTGG...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCATGTCCAAGCAGTCTaGCCTGCTCTCATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDHVQAV*PALIVA
Trigger: GGCCACAATGAGAGCAGGGCAGACTGCTTGGACATG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTCATGTCCAAGCAGTCTaGCCTGCTCTCATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIHVQAV*PALIVA
Trigger: GGCCACAATGAGAGCAGGGCAGACTGCTTGGACATG...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGCAGGCAGGCTATGCTaGAGTCTTCAGCTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCAGRLC*SLQLVV
Trigger: GACTACAAGCTGAAGACTGCAGCATAGCCTGCCTGC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACACAGAACATGCCACTaGGCCCACCGCCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKHRTCH*AHRHSS
Trigger: GCTTGAATGGCGGTGGGCGCAGTGGCATGTTCTGTG...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCTGCGCACTGACATaGACCCACTCAAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGSCALT*THSKSS
Trigger: CGATGACTTTGAGTGGGTCCATGTCAGTGCGCAGGA...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGTCTAGTGATCAGTGGTaGTCCTGGCAGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALSSDQW*SWQPSS
Trigger: GGAACTGGGCTGCCAGGACCACCACTGATCACTAGA...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTCGTTCTAGTGATCAGTaGTGGTCCTGGCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIRSSDQ*WSWQPS
Trigger: ACTGGGCTGCCAGGACCACCACTGATCACTAGAACG...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCATGCTGAGGGGCTTTaGGGTCCATGTCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDHAEGL*GPCPSS
Trigger: ACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCCCTGTTGCGTGGTATaGAACACCATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDPCCVV*NTMVRP
Trigger: TGGCCTGACCATGGTGTTCCATACCACGCAACAGGG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCCCTGTTGCGTGGTATaGAACACCATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFPCCVV*NTMVRP
Trigger: TGGCCTGACCATGGTGTTCCATACCACGCAACAGGG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATGCAGTGTACGACAATaGGCCCAGCACTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKCSVRQ*AQHWEG
Trigger: ACCCTCCCAGTGCTGGGCCCATTGTCGTACACTGCA...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCCTTGTCATGGTTCCTTaGCAGGCAGGCTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGLVMVP*QAGYAA
Trigger: TGCAGCATAGCCTGCCTGCCAAGGAACCATGACAAG...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACTTCTGGCCAGTACTGTaGGCAGCCCTGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNFWPVL*AALRQV
Trigger: GACCTGTCTCAGGGCTGCCCACAGTACTGGCCAGAA...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCGAACCTCGTTCTGACTaGGTTACGCAGCGGTACAAA +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGEPRSD*VTQRYK
Trigger: TTTGTACCGCTGCGTAACTCAGTCAGAACGAGGTTC...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR TCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCCCAGAACCTCGTTCTaGCTGAGTTACGCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLPRTSF*LSYAAV
Trigger: TACCGCTGCGTAACTCAGTCAGAACGAGGTTCTGGG...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCACATCCCAAGAGGCTaGCTGGCCTTCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDHIPRG*LAFKEA
Trigger: AGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGATGTG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCACATCCCAAGAGGCTaGCTGGCCTTCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFHIPRG*LAFKEA
Trigger: AGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGATGTG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCATACTGTGGGCAGCCCTaGGACAGGTCCACTTCATTT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSYCGQP*DRSTSF
Trigger: AAATGAAGTGGACCTGTCTCAGGGCTGCCCACAGTA...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACATTCAAGCAGTGGATaGTTGTCCGGCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSHSSSG*LSGLPL
Trigger: AAGGGGAAGGCCGGACAATCATCCACTGCTTGAATG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATCCAAGCAGTCTGCCCTaGTCTCATTGTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDPSSLP*SHCGHG
Trigger: TCCGTGGCCACAATGAGAGCAGGGCAGACTGCTTGG...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACATGTCCAAGCAGTCTaGCCTGCTCTCATTGTGGCC +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQHVQAV*PALIVA
Trigger: GGCCACAATGAGAGCAGGGCAGACTGCTTGGACATG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACAGGGGGTCTTCTGCATaGAGGGTGCTCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDRGSSA*RVLWSA
Trigger: TGCTGACCAGAGCACCCTGCATGCAGAAGACCCCCT...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWETTRL*CGTVVL
Trigger: GAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTC...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCAGGCAGACTGCTCTTaGCACACCATCCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWQADCS*HTILQK
Trigger: TTTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTG...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR GCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACACAGAACATGCCACTaGGCCCACCGCCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSHRTCH*AHRHSS
Trigger: GCTTGAATGGCGGTGGGCGCAGTGGCATGTTCTGTG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCTGCGCACTGACATaGACCCACTCAAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSSCALT*THSKSS
Trigger: CGATGACTTTGAGTGGGTCCATGTCAGTGCGCAGGA...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGCCAACACCAAGCAGCTaGGGAGGAGCAATGGGTCTA +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMPTPSS*GGAMGL
Trigger: TAGACCCATTGCTCCTCCCCAGCTGCTTGGTGTTGG...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTCTAGTGATCAGTGGTaGTCCTGGCAGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDASSDQW*SWQPSS
Trigger: GGAACTGGGCTGCCAGGACCACCACTGATCACTAGA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACGTTCTAGTGATCAGTaGTGGTCCTGGCAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKRSSDQ*WSWQPS
Trigger: ACTGGGCTGCCAGGACCACCACTGATCACTAGAACG...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACATGCTGAGGGGCTTTaGGGTCCATGTCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKHAEGL*GPCPSS
Trigger: ACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATG...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACCATGCTGAGGGGCTTTaGGGTCCATGTCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNHAEGL*GPCPSS
Trigger: ACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATG...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGACCTGGTAGCATTCCATaGCCCCTGCTTCACGCTTCG +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRPGSIP*PLLHAS
Trigger: CGAAGCGTGAAGCAGGGGCCATGGAATGCTACCAGG...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACCTGGTAGCATTCCATaGCCCCTGCTTCACGCTTCG +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSPGSIP*PLLHAS
Trigger: CGAAGCGTGAAGCAGGGGCCATGGAATGCTACCAGG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGTCTGGGATCACTTCTaGTTCTTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCVWDHF*FFCCCC
Trigger: GCAGCAGCAACAGAAGAACCAGAAGTGATCCCAGAC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCTGCTTTGCCGGGTCTaGGATCACTTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALLLCRV*DHFWFF
Trigger: GAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAG...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCTGCTTTGCCGGGTCTaGGATCACTTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFLLCRV*DHFWFF
Trigger: GAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGGCAGTCGGCACAAGTaGATCATTGGGCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFGSRHK*IIGQSW
Trigger: CCAAGATTGCCCAATGATCCACTTGTGCCGACTGCC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTCCCAAGAGGCTGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDSQEAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGGCCAGCCAGTGAAGTaGAACTGTTTGACTTCACGG +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIGQPVK*NCLTSR
Trigger: CCGTGAAGTCAAACAGTTCCACTTCACTGGCTGGCC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCCCTGTTGCGTGGTATaGAACACCATGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAPCCVV*NTMVRP
Trigger: TGGCCTGACCATGGTGTTCCATACCACGCAACAGGG...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTGCAGTGTACGACAATaGGCCCAGCACTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDCSVRQ*AQHWEG
Trigger: ACCCTCCCAGTGCTGGGCCCATTGTCGTACACTGCA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCTTGTCATGGTTCCTTaGCAGGCAGGCTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLLVMVP*QAGYAA
Trigger: TGCAGCATAGCCTGCCTGCCAAGGAACCATGACAAG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCAAACGGTTCTTGTCATaGTTCCTTGGCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGKRFLS*FLGRQA
Trigger: AGCCTGCCTGCCAAGGAACCATGACAAGAACCGTTT...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATTCTGGCCAGTACTGTaGGCAGCCCTGAGACAGGTC +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSFWPVL*AALRQV
Trigger: GACCTGTCTCAGGGCTGCCCACAGTACTGGCCAGAA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGGCTTCCACCATGTTTaGCTTGCTGTTCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSGFHHV*LAVPQR
Trigger: ACGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCC...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACCCAGAACCTCGTTCTaGCTGAGTTACGCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSPRTSF*LSYAAV
Trigger: TACCGCTGCGTAACTCAGTCAGAACGAGGTTCTGGG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATCCCAGAACCTCGTTCTaGCTGAGTTACGCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDPRTSF*LSYAAV
Trigger: TACCGCTGCGTAACTCAGTCAGAACGAGGTTCTGGG...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAAGTGTGGCAACGAGTaGTGTTGTAGCCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLKCGNE*CCSPRT
Trigger: AGTCCTTGGGCTACAACATCACTCGTTGCCACACTT...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGAAGTGTGGCAACGAGTaGTGTTGTAGCCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWKCGNE*CCSPRT
Trigger: AGTCCTTGGGCTACAACATCACTCGTTGCCACACTT...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATGGTTCACAACATGCTaGGGGGCTTTGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSWFTTC*GALGSM
Trigger: CATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGCCTCAATAGTACTGTaGTGGTGGTGGCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCASIVL*WWWQFH
Trigger: ATGAAACTGCCACCACCATCACAGTACTATTGAGGC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACACATCCCAAGAGGCTaGCTGGCCTTCAAAGAAGCT +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQHIPRG*LAFKEA
Trigger: AGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGATGTG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCCACAGGTTGCAGGATaGCTCTGGAGTGATCATATG +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFPQVAG*LWSDHM
Trigger: CATATGATCACTCCAGAGTCATCCTGCAACCTGTGG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCTTGTAGTCGAGGGGTaGCCGAATTCAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALLVVEG*PNSESE
Trigger: TTCAGACTCTGAATTCGGTCACCCCTCGACTACAAG...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACTACTGTGGGCAGCCCTaGGACAGGTCCACTTCATTT +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNYCGQP*DRSTSF
Trigger: AAATGAAGTGGACCTGTCTCAGGGCTGCCCACAGTA...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCATTCAAGCAGTGGATaGTTGTCCGGCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVHSSSG*LSGLPL
Trigger: AAGGGGAAGGCCGGACAATCATCCACTGCTTGAATG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCATTGGGCCAAAAGGTaGTCACAGCTAGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVHWAKR*SQLVQP
Trigger: GGGCTGAACTAGCTGTGAGCACCTTTTGGCCCAATG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTCTGTCTGTCTGCTTTaGCGGGTCTGGGATCACTTC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMSVCLL*RVWDHF
Trigger: GAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACTTCTGCATGCAGGGTaGTCTGGTCAGCATAACTTC +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSLLHAG*SGQHNF
Trigger: GAAGTTATGCTGACCAGAGCACCCTGCATGCAGAAG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQETTRL*CGTVVL
Trigger: GAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLETTRL*CGTVVL
Trigger: GAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCAGGCAGACTGCTCTTaGCACACCATCCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDQADCS*HTILQK
Trigger: TTTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAAGCAGGCAGGCTATGCTaGAGTCTTCAGCTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKAGRLC*SLQLVV
Trigger: GACTACAAGCTGAAGACTGCAGCATAGCCTGCCTGC...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGCAGGCAGGCTATGCTaGAGTCTTCAGCTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAAGRLC*SLQLVV
Trigger: GACTACAAGCTGAAGACTGCAGCATAGCCTGCCTGC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTTGGCAGGCAGGCTATaGTGCAGTCTTCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWILAGRL*CSLQLV
Trigger: TACAAGCTGAAGACTGCAGCATAGCCTGCCTGCCAA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGTGTGACGATGAAAGCTaGTGGCTGCCTATAGCTATC +
Preference number: 4 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWCDDES*WLPIAI
Trigger: GATAGCTATAGGCAGCCAGCAGCTTTCATCGTCACA...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR GCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCCCACCATGTTTGGCTTaGTGTTCCTCAGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCPPCLA*CSSASL
Trigger: TAAAGACGCTGAGGAACAGCAAGCCAAACATGGTGG...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTCCTGCGCACTGACATaGACCCACTCAAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSSCALT*THSKSS
Trigger: CGATGACTTTGAGTGGGTCCATGTCAGTGCGCAGGA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGGTGCGTTGACTGCATaGGTTTCTGTCCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIGALTA*VSVQDP
Trigger: AGGATCTTGGACAGAAACCCATGCAGTCAACGCACC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGATCTAGTGATCAGTGGTaGTCCTGGCAGCCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRSSDQW*SWQPSS
Trigger: GGAACTGGGCTGCCAGGACCACCACTGATCACTAGA...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATGTCTGGGATCACTTCTaGTTCTTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDVWDHF*FFCCCC
Trigger: GCAGCAGCAACAGAAGAACCAGAAGTGATCCCAGAC...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGGCAGTCGGCACAAGTaGATCATTGGGCAATCTTGG +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQGSRHK*IIGQSW
Trigger: CCAAGATTGCCCAATGATCCACTTGTGCCGACTGCC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCCCAAGAGGCTGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASQEAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTCCCAAGAGGCTGACTaGCCTTCAAAGAAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDASQEAD*PSKKLS
Trigger: CGAGAGCTTCTTTGAAGGCCAGTCAGCCTCTTGGGA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCAATGTAGTGGCTTaGTCTCTGGTAGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFCNVVA*SLVAIP
Trigger: AGGGATGGCTACCAGAGACCAAGCCACTACATTGCA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCCTTGTCATGGTTCCTTaGCAGGCAGGCTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSLVMVP*QAGYAA
Trigger: TGCAGCATAGCCTGCCTGCCAAGGAACCATGACAAG...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCAAACGGTTCTTGTCATaGTTCCTTGGCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFKRFLS*FLGRQA
Trigger: AGCCTGCCTGCCAAGGAACCATGACAAGAACCGTTT...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGACGATGAAAGCTGCTaGCTGCCTATAGCTATCCAT +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCDDESC*LPIAIH
Trigger: ATGGATAGCTATAGGCAGCCAGCAGCTTTCATCGTC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCGGCTTCCACCATGTTTaGCTTGCTGTTCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVGFHHV*LAVPQR
Trigger: ACGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCC...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGCCAATCACGACCAGTaGATCCAGTTACATTCCAAA +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCANHDQ*IQLHSK
Trigger: TTTGGAATGTAACTGGATTCACTGGTCGTGATTGGC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGAACCTCGTTCTGACTaGGTTACGCAGCGGTACAAA +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQEPRSD*VTQRYK
Trigger: TTTGTACCGCTGCGTAACTCAGTCAGAACGAGGTTC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTATATGTTGGTGCGTTaGCTGCATGGGTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFYMLVR*LHGFLS
Trigger: GGACAGAAACCCATGCAGTCAACGCACCAACATATA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCAAGTGTGGCAACGAGTaGTGTTGTAGCCCAAGGACT +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVKCGNE*CCSPRT
Trigger: AGTCCTTGGGCTACAACATCACTCGTTGCCACACTT...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGCCTCAATAGTACTGTaGTGGTGGTGGCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIASIVL*WWWQFH
Trigger: ATGAAACTGCCACCACCATCACAGTACTATTGAGGC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTCTCGTATTCCTCTTTaGACCCATAGCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCSRIPL*THSCLM
Trigger: CATCAGACAGCTATGGGTTCAAAGAGGAATACGAGA...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACCACAGGTTGCAGGATaGCTCTGGAGTGATCATATG +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKPQVAG*LWSDHM
Trigger: CATATGATCACTCCAGAGTCATCCTGCAACCTGTGG...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGCTTGTAGTCGAGGGGTaGCCGAATTCAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMLVVEG*PNSESE
Trigger: TTCAGACTCTGAATTCGGTCACCCCTCGACTACAAG...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp GAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCAAATCTGCGTGGGAGCATATCCATaGAACGGTTCTTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: EKAVWSLDRHRPLLIQICVGAYP*NGSCHG
Trigger: ACCATGACAAGAACCGTTTCATGGATATGCTCCCAC...GCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCGTGGGAGCATATCCATaGAACGGTTCTTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLVGAYP*NGSCHG
Trigger: ACCATGACAAGAACCGTTTCATGGATATGCTCCCAC...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGTCTCCATTGCGTCTCTaGAGCCATAACTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWSPLRL*SHNLLC
Trigger: GCATAACAAGTTATGGCTGCAGAGACGCAATGGAGA...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR GCA 90 bp GAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCAAATCTGCTGTTGGTGCGTTGACTaGATGGGTTTCTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EKAVWSLDRHRPLLIQICCWCVD*MGFCPR
Trigger: TCTTGGACAGAAACCCATGCAGTCAACGCACCAACA...GCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCTGTCTGTCTGCTTTaGCGGGTCTGGGATCACTTC +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSVCLL*RVWDHF
Trigger: GAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAACCCAAAGCTTGTGCTTGGAAACATCAAAAAGAACACTGCGCCGCTACGGTGCTTCTGCATGCAGGGTaGTCTGGTCAGCATAACTTC +
Preference number: 4 (lower is better)
Translates to: KPKACAWKHQKEHCAATVLLHAG*SGQHNF
Trigger: GAAGTTATGCTGACCAGAGCACCCTGCATGCAGAAG...CACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCTTCTGCATGCAGGGTaGTCTGGTCAGCATAACTTC +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVLLHAG*SGQHNF
Trigger: GAAGTTATGCTGACCAGAGCACCCTGCATGCAGAAG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTTGGCAGGCAGGCTATaGTGCAGTCTTCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSLAGRL*CSLQLV
Trigger: TACAAGCTGAAGACTGCAGCATAGCCTGCCTGCCAA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCACCACCATGTTTGGCTTaGTGTTCCTCAGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSPPCLA*CSSASL
Trigger: TAAAGACGCTGAGGAACAGCAAGCCAAACATGGTGG...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGGTAGTCACAAGCCCCTaGCCCATCATCAAAAGTACA +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALVVTSP*PIIKST
Trigger: TGTACTTTTGATGATGGGCCAGGGGCTTGTGACTAC...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGGTGCGTTGACTGCATaGGTTTCTGTCCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLGALTA*VSVQDP
Trigger: AGGATCTTGGACAGAAACCCATGCAGTCAACGCACC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGGTCTGGGATCACTTCTaGTTCTTCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAVWDHF*FFCCCC
Trigger: GCAGCAGCAACAGAAGAACCAGAAGTGATCCCAGAC...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATCTGCTTTGCCGGGTCTaGGATCACTTCTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDLLCRV*DHFWFF
Trigger: GAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAG...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCTGCTGTGGCACTGTaGTTCTCATCTAACACGGCA +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASAVAL*FSSNTA
Trigger: TGCCGTGTTAGATGAGAACCACAGTGCCACAGCAGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp GCCACTTACAAAGTGCATGCAATGTGTGGTAGCTGCTCTACAGAAAGCAGGAGATGCAATGTAGTGGCTTaGTCTCTGGTAGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: ATYKVHAMCGSCSTESRRCNVVA*SLVAIP
Trigger: AGGGATGGCTACCAGAGACCAAGCCACTACATTGCA...TCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGACATACTCAGCAAGTaGCTCCATTTCTACGCAGGT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSDILSK*LHFYAG
Trigger: ACCTGCGTAGAAATGGAGCCACTTGCTGAGTATGTC...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGACATACTCAGCAAGTaGCTCCATTTCTACGCAGGT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIDILSK*LHFYAG
Trigger: ACCTGCGTAGAAATGGAGCCACTTGCTGAGTATGTC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGGCCAGCCAGTGAAGTaGAACTGTTTGACTTCACGG +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSGQPVK*NCLTSR
Trigger: CCGTGAAGTCAAACAGTTCCACTTCACTGGCTGGCC...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAGGCCAGCCAGTGAAGTaGAACTGTTTGACTTCACGG +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRGQPVK*NCLTSR
Trigger: CCGTGAAGTCAAACAGTTCCACTTCACTGGCTGGCC...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCAGACATCTGTCAGGTaGGAGCATATCCATGAAACG +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLQTSVR*EHIHET
Trigger: CGTTTCATGGATATGCTCCCACCTGACAGATGTCTG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGACGATGAAAGCTGCTaGCTGCCTATAGCTATCCAT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIDDESC*LPIAIH
Trigger: ATGGATAGCTATAGGCAGCCAGCAGCTTTCATCGTC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGACATACATTCCACTTaGATAGGACCATATCGCAGC +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCDIHST*IGPYRS
Trigger: GCTGCGATATGGTCCTATCCAAGTGGAATGTATGTC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGCCAATCACGACCAGTaGATCCAGTTACATTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIANHDQ*IQLHSK
Trigger: TTTGGAATGTAACTGGATTCACTGGTCGTGATTGGC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATGCCAATCACGACCAGTaGATCCAGTTACATTCCAAA +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDANHDQ*IQLHSK
Trigger: TTTGGAATGTAACTGGATTCACTGGTCGTGATTGGC...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCCTGTAGCAATGCACTaGAATGTAGCATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLPVAMH*NVAFCP
Trigger: TGGGCAGAATGCTACATTTCAGTGCATTGCTACAGG...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTCACTTCTTGCAATCTaGAAGAGGCAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCSLLAI*KRQQIF
Trigger: GAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGTGA...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGAACCTCGTTCTGACTaGGTTACGCAGCGGTACAAA +
Preference number: 4 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTEPRSD*VTQRYK
Trigger: TTTGTACCGCTGCGTAACTCAGTCAGAACGAGGTTC...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTCTCTCACAATGAGTTaGGCAAAATTGGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCSLTMS*AKLETP
Trigger: TGGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGA...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTATATGTTGGTGCGTTaGCTGCATGGGTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMYMLVR*LHGFLS
Trigger: GGACAGAAACCCATGCAGTCAACGCACCAACATATA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTATATGTTGGTGCGTTaGCTGCATGGGTTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSYMLVR*LHGFLS
Trigger: GGACAGAAACCCATGCAGTCAACGCACCAACATATA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACTTCATCAGTTTGGATaGTTGTCTCTTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSLHQFG*LSLRSP
Trigger: AGGAGAGCGAAGAGACAATCATCCAAACTGATGAAG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCCTCAATAGTACTGTaGTGGTGGTGGCAGTTTCAT +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMASIVL*WWWQFH
Trigger: ATGAAACTGCCACCACCATCACAGTACTATTGAGGC...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTCTCGTATTCCTCTTTaGACCCATAGCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFSRIPL*THSCLM
Trigger: CATCAGACAGCTATGGGTTCAAAGAGGAATACGAGA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACCACAGGTTGCAGGATaGCTCTGGAGTGATCATATG +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSPQVAG*LWSDHM
Trigger: CATATGATCACTCCAGAGTCATCCTGCAACCTGTGG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCTAGGATATTCAAAGTaGCAGGGTTCAACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLLGYSK*QGSTPS
Trigger: AGAAGGGGTTGAACCCTGGCACTTTGAATATCCTAG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTGTTGGTGCGTTGACTaGATGGGTTTCTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVCWCVD*MGFCPR
Trigger: TCTTGGACAGAAACCCATGCAGTCAACGCACCAACA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGTGGTTCTTCTGTTGCTaGTGCTTTTGTAGCAATTCG +
Preference number: 4 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWWFFCC*CFCSNS
Trigger: CGAATTGCTACAAAAGCAGCAGCAACAGAAGAACCA...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR GCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTGTGACGATGAAAGCTaGTGGCTGCCTATAGCTATC +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSACDDES*WLPIAI
Trigger: GATAGCTATAGGCAGCCAGCAGCTTTCATCGTCACA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTGTGACGATGAAAGCTaGTGGCTGCCTATAGCTATC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMCDDES*WLPIAI
Trigger: GATAGCTATAGGCAGCCAGCAGCTTTCATCGTCACA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCCATCTCCACAACAATaGCTATGGCACAGAACATGC +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAPSPQQ*LWHRTC
Trigger: GCATGTTCTGTGCCATAGGCATTGTTGTGGAGATGG...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACCATCTCCACAACAATaGCTATGGCACAGAACATGC +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQPSPQQ*LWHRTC
Trigger: GCATGTTCTGTGCCATAGGCATTGTTGTGGAGATGG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGACATCCACCACATTTTaGCGCTTCACCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMTSTTF*RFTIST
Trigger: TGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGT...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGCCTCAGCGTCTTTACTaGATGGAAAACATCCACCAC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMPQRLY*MENIHH
Trigger: GTGGTGGATGTTTTCCATGCAGTAAAGACGCTGAGG...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCCTCAGCGTCTTTACTaGATGGAAAACATCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLPQRLY*MENIHH
Trigger: GTGGTGGATGTTTTCCATGCAGTAAAGACGCTGAGG...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGTAGTCACAAGCCCCTaGCCCATCATCAAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLVVTSP*PIIKST
Trigger: TGTACTTTTGATGATGGGCCAGGGGCTTGTGACTAC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp GAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCAAATCTGCTTACCTGGTATTCATTaGGCCAAAAGGTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: EKAVWSLDRHRPLLIQICLPGIH*AKRCSQ
Trigger: CTGTGAGCACCTTTTGGCCCAATGAATACCAGGTAA...GCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGAGCAATGGGTCTAGGTaGTTCTCTCACAATGAGTTG +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALSNGSR*FSHNEL
Trigger: CAACTCATTGTGAGAGAACCACCTAGACCCATTGCT...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGGTGCGTTGACTGCATaGGTTTCTGTCCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSGALTA*VSVQDP
Trigger: AGGATCTTGGACAGAAACCCATGCAGTCAACGCACC...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCCACAACTTATATGTTaGTGCGTTGACTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWPQLIC*CVDCMG
Trigger: ACCCATGCAGTCAACGCACCAACATATAAGTTGTGG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGACATTTGTGTAAGGTaGCAGATGGTTCACAACATG +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCDICVR*QMVHNM
Trigger: CATGTTGTGAACCATCTGCCACCTTACACAAATGTC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCAAAGGATGTTCCTTaGAGGGATTTGACTGGCACA +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWISKDVP*RDLTGT
Trigger: TGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGATTGATGGCTGTTGCTaGTCCAAAGCCTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALIDGCC*SKAFDS
Trigger: ACTGTCAAAGGCTTTGGACCAGCAACAGCCATCAAT...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGATGGCTGTTGCTaGTCCAAAGCCTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWIDGCC*SKAFDS
Trigger: ACTGTCAAAGGCTTTGGACCAGCAACAGCCATCAAT...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSGLKLC*SMKVRE
Trigger: TTCCCTCACCTTCATGGACCAACATAACTTCAGTCC...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATGCAATGTAGTGGCTTaGTCTCTGGTAGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSCNVVA*SLVAIP
Trigger: AGGGATGGCTACCAGAGACCAAGCCACTACATTGCA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGACATACTCAGCAAGTaGCTCCATTTCTACGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLDILSK*LHFYAG
Trigger: ACCTGCGTAGAAATGGAGCCACTTGCTGAGTATGTC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAAAACGGTTCTTGTCATaGTTCCTTGGCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTKRFLS*FLGRQA
Trigger: AGCCTGCCTGCCAAGGAACCATGACAAGAACCGTTT...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGACGATGAAAGCTGCTaGCTGCCTATAGCTATCCAT +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDADDESC*LPIAIH
Trigger: ATGGATAGCTATAGGCAGCCAGCAGCTTTCATCGTC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCACAGTGTTTGGCAGTaGGTATTGTGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDHSVWQ*VLCDDE
Trigger: TTCATCGTCACACAATACCCACTGCCAAACACTGTG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCACAGTGTTTGGCAGTaGGTATTGTGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLHSVWQ*VLCDDE
Trigger: TTCATCGTCACACAATACCCACTGCCAAACACTGTG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp GAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCAAATCTGCGACATACATTCCACTTaGATAGGACCATATCGCAGC +
Preference number: 4 (lower is better)
Translates to: EKAVWSLDRHRPLLIQICDIHST*IGPYRS
Trigger: GCTGCGATATGGTCCTATCCAAGTGGAATGTATGTC...GCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCAAAAACGAGCGTTTaGAGCCAGGCACTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASKTSV*SQALLD
Trigger: ATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCTGCTGTGGCACTGTaGTTCTCATATCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASAVAL*FSYLGL
Trigger: CAGTCCAAGATATGAGAACCACAGTGCCACAGCAGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGACCACTTCTCCCTCCTaGGACTTCAGCTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSATTSPS*DFSFKY
Trigger: ATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGT...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACCACTTCTCCCTCCTaGGACTTCAGCTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQTTSPS*DFSFKY
Trigger: ATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGT...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACCCTGTAGCAATGCACTaGAATGTAGCATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDPVAMH*NVAFCP
Trigger: TGGGCAGAATGCTACATTTCAGTGCATTGCTACAGG...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGTCTCTCACAATGAGTTaGGCAAAATTGGAAACCCCA +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALSLTMS*AKLETP
Trigger: TGGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGA...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp GCCACTTACAAAGTGCATGCAATGTGTGGTAGCTGCTCTACAGAAAGCAGGAGACTTCATCAGTTTGGATaGTTGTCTCTTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ATYKVHAMCGSCSTESRRLHQFG*LSLRSP
Trigger: AGGAGAGCGAAGAGACAATCATCCAAACTGATGAAG...TCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGGAACCCATAGCTGTCTaGTGTCTTCATGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALEPIAV*CLHEVN
Trigger: ATTAACCTCATGAAGACATCAGACAGCTATGGGTTC...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAATCTCGTATTCCTCTTTaGACCCATAGCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQSRIPL*THSCLM
Trigger: CATCAGACAGCTATGGGTTCAAAGAGGAATACGAGA...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGTGGGAGCATATCCATaGAACGGTTCTTGTCATGGT +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDVGAYP*NGSCHG
Trigger: ACCATGACAAGAACCGTTTCATGGATATGCTCCCAC...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CAGGCATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATACTGTGGGCAGCCCTaGGACAGGTCCACTTCATTT +
Preference number: 4 (lower is better)
Translates to: QACTQGNHYRKHCFLVYEYCGQP*DRSTSF
Trigger: AAATGAAGTGGACCTGTCTCAGGGCTGCCCACAGTA...TTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCACATCACAGTCCATTaGACAAGACATACATTCCAC +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWHITVH*TRHTFH
Trigger: GTGGAATGTATGTCTTGTTCAATGGACTGTGATGTG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACACATCACAGTCCATTaGACAAGACATACATTCCAC +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSHITVH*TRHTFH
Trigger: GTGGAATGTATGTCTTGTTCAATGGACTGTGATGTG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CAGGCATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAACATTCAAGCAGTGGATaGTTGTCCGGCCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: QACTQGNHYRKHCFLVYEHSSSG*LSGLPL
Trigger: AAGGGGAAGGCCGGACAATCATCCACTGCTTGAATG...TTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACTAGGATATTCAAAGTaGCAGGGTTCAACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQLGYSK*QGSTPS
Trigger: AGAAGGGGTTGAACCCTGGCACTTTGAATATCCTAG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCAAGCCATAACTTGTTATaGACAGCATCTCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSSHNLL*TASLPV
Trigger: TACAGGGAGAGATGCTGTGCATAACAAGTTATGGCT...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGCCATAACTTGTTATaGACAGCATCTCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLSHNLL*TASLPV
Trigger: TACAGGGAGAGATGCTGTGCATAACAAGTTATGGCT...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGAGCCATAACTTGTTATaGACAGCATCTCTCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWSHNLL*TASLPV
Trigger: TACAGGGAGAGATGCTGTGCATAACAAGTTATGGCT...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTCTCCATTGCGTCTCTaGAGCCATAACTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMSPLRL*SHNLLC
Trigger: GCATAACAAGTTATGGCTGCAGAGACGCAATGGAGA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACTGTTGGTGCGTTGACTaGATGGGTTTCTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDCWCVD*MGFCPR
Trigger: TCTTGGACAGAAACCCATGCAGTCAACGCACCAACA...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTTCACATTCCTCTTaGCATTTTTCCACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWISSHSS*HFSTCS
Trigger: ACTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATCCATCTCCACAACAATaGCTATGGCACAGAACATGC +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDPSPQQ*LWHRTC
Trigger: GCATGTTCTGTGCCATAGGCATTGTTGTGGAGATGG...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACACATCCACCACATTTTaGCGCTTCACCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDTSTTF*RFTIST
Trigger: TGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGT...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGACCACCATGTTTGGCTTaGTGTTCCTCAGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRPPCLA*CSSASL
Trigger: TAAAGACGCTGAGGAACAGCAAGCCAAACATGGTGG...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACTTACCTGGTATTCATTaGGCCAAAAGGTGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNLPGIH*AKRCSQ
Trigger: CTGTGAGCACCTTTTGGCCCAATGAATACCAGGTAA...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCAGCAATGGGTCTAGGTaGTTCTCTCACAATGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVSNGSR*FSHNEL
Trigger: CAACTCATTGTGAGAGAACCACCTAGACCCATTGCT...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGATTGATGGCTGTTGCTaGTCCAAAGCCTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMIDGCC*SKAFDS
Trigger: ACTGTCAAAGGCTTTGGACCAGCAACAGCCATCAAT...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSGLKLC*SMKVRE
Trigger: TTCCCTCACCTTCATGGACCAACATAACTTCAGTCC...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATCAGACATCTGTCAGGTaGGAGCATATCCATGAAACG +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDQTSVR*EHIHET
Trigger: CGTTTCATGGATATGCTCCCACCTGACAGATGTCTG...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCACAGTGTTTGGCAGTaGGTATTGTGTGACGATGAA +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVHSVWQ*VLCDDE
Trigger: TTCATCGTCACACAATACCCACTGCCAAACACTGTG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGATCAAAAACGAGCGTTTaGAGCCAGGCACTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRSKTSV*SQALLD
Trigger: ATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGA...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCAAAAACGAGCGTTTaGAGCCAGGCACTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSKTSV*SQALLD
Trigger: ATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGGGCTTCCACCATGTTTaGCTTGCTGTTCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGEGFHHV*LAVPQR
Trigger: ACGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCC...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAATCCAGGATCATGATTTaGGGAGTCCACAACCATATA +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQSRIMI*GVHNHI
Trigger: TATATGGTTGTGGACTCCTCAAATCATGATCCTGGA...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCCAGGATCATGATTTaGGGAGTCCACAACCATATA +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASRIMI*GVHNHI
Trigger: TATATGGTTGTGGACTCCTCAAATCATGATCCTGGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTCACTTCTTGCAATCTaGAAGAGGCAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDASLLAI*KRQQIF
Trigger: GAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGTGA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATGTGGTTCTCTCACAATaGGTTGAGCAAAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDVVLSQ*VEQNWK
Trigger: TTTCCAATTTTGCTCAACTCATTGTGAGAGAACCAC...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGTGGTTCTCTCACAATaGGTTGAGCAAAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFVVLSQ*VEQNWK
Trigger: TTTCCAATTTTGCTCAACTCATTGTGAGAGAACCAC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACACTTCATCAGTTTGGATaGTTGTCTCTTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTLHQFG*LSLRSP
Trigger: AGGAGAGCGAAGAGACAATCATCCAAACTGATGAAG...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGGAACCCATAGCTGTCTaGTGTCTTCATGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAEPIAV*CLHEVN
Trigger: ATTAACCTCATGAAGACATCAGACAGCTATGGGTTC...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTTCTTTGCTCTGTTTTaGTCCTTTTTAGCCACATCC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFFFALF*SFLATS
Trigger: GGATGTGGCTAAAAAGGATCAAAACAGAGCAAAGAA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGCTTGTAGTCGAGGGGTaGCCGAATTCAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGELVVEG*PNSESE
Trigger: TTCAGACTCTGAATTCGGTCACCCCTCGACTACAAG...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGCACATCACAGTCCATTaGACAAGACATACATTCCAC +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAHITVH*TRHTFH
Trigger: GTGGAATGTATGTCTTGTTCAATGGACTGTGATGTG...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACCTAGGATATTCAAAGTaGCAGGGTTCAACCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDLGYSK*QGSTPS
Trigger: AGAAGGGGTTGAACCCTGGCACTTTGAATATCCTAG...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCTCCATTGCGTCTCTaGAGCCATAACTTGTTATGC +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSPLRL*SHNLLC
Trigger: GCATAACAAGTTATGGCTGCAGAGACGCAATGGAGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGTTTTTGTCACTTCTTaGAATCTGAAAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFVFVTS*NLKEAA
Trigger: TGCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAAC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATGGTCAAATGATCTTATaGTGCTATAGCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDGQMIL*CYSSPH
Trigger: ATGAGGTGAGCTATAGCAGCATAAGATCATTTGACC...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGTTCTTCTGTTGCTGCTaGTTTTGTAGCAATTCGTAC +
Preference number: 4 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALFFCCC*FCSNSY
Trigger: GTACGAATTGCTACAAAAGCAGCAGCAACAGAAGAA...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTGGTTCTTCTGTTGCTaGTGCTTTTGTAGCAATTCG +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAWFFCC*CFCSNS
Trigger: CGAATTGCTACAAAAGCAGCAGCAACAGAAGAACCA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCATTCTGGTTCTTCTGTTaGTGCTGCTTTTGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSFWFFC*CCFCSN
Trigger: ATTGCTACAAAAGCAGCAGCAACAGAAGAACCAGAA...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TATGTGGGGCACATGAATGAGACCACACATCTATTTGCACTGTCTATTGTAGAATCTGTCTGTCTGCTTTaGCGGGTCTGGGATCACTTC +
Preference number: 4 (lower is better)
Translates to: YVGHMNETTHLFALSIVESVCLL*RVWDHF
Trigger: GAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGA...TTCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCTCTGGAGTGATCATATaGGATAATGTTTCCGTATCG +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLSGVII*DNVSVS
Trigger: CGATACGGAAACATTATCGCATATGATCACTCCAGA...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACTCTTCACATTCCTCTTaGCATTTTTCCACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNSSHSS*HFSTCS
Trigger: ACTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGA...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTCTTCACATTCCTCTTaGCATTTTTCCACCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMSSHSS*HFSTCS
Trigger: ACTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCTTGGATGTCATCAATaGCAATATAACCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWLGCHQ*QYNHFS
Trigger: GGAGAAGTGGTTATATTGCCATTGATGACATCCAAG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTTTATGTTCTTAGTCTaGGCTACGGGTATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIFMFLV*ATGMSS
Trigger: AGAAGACATACCCGTAGCCCAGACTAAGAACATAAA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTTATGTTCTTAGTCTaGGCTACGGGTATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDFMFLV*ATGMSS
Trigger: AGAAGACATACCCGTAGCCCAGACTAAGAACATAAA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAACCCAAAGCTTGTGCTTGGAAACATCAAAAAGAACACTGCGCCGCTACGGTGCAGCGGTACAAATCCTaGTCAGTTTTTGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: KPKACAWKHQKEHCAATVQRYKS*SVFVTS
Trigger: AGAAGTGACAAAAACTGACCAGGATTTGTACCGCTG...CACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACAGCGGTACAAATCCTaGTCAGTTTTTGTCACTTCT +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQQRYKS*SVFVTS
Trigger: AGAAGTGACAAAAACTGACCAGGATTTGTACCGCTG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATAGCAATGGGTCTAGGTaGTTCTCTCACAATGAGTTG +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSNGSR*FSHNEL
Trigger: CAACTCATTGTGAGAGAACCACCTAGACCCATTGCT...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACACCACAACTTATATGTTaGTGCGTTGACTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTPQLIC*CVDCMG
Trigger: ACCCATGCAGTCAACGCACCAACATATAAGTTGTGG...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGCAATGCGCCTTGCCTaGATTTCAGCAATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSAMRLA*ISAIFK
Trigger: TTTAAAGATTGCTGAAATCCAGGCAAGGCGCATTGC...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGCAATGCGCCTTGCCTaGATTTCAGCAATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLAMRLA*ISAIFK
Trigger: TTTAAAGATTGCTGAAATCCAGGCAAGGCGCATTGC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGACATTTGTGTAAGGTaGCAGATGGTTCACAACATG +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSDICVR*QMVHNM
Trigger: CATGTTGTGAACCATCTGCCACCTTACACAAATGTC...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAAGACATTTGTGTAAGGTaGCAGATGGTTCACAACATG +
Preference number: 4 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKDICVR*QMVHNM
Trigger: CATGTTGTGAACCATCTGCCACCTTACACAAATGTC...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCGCAATTCGTACACATTaGGTTTTAGTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLAIRTH*VLVSFS
Trigger: GGAGAAGGAAACTAAAACCCAATGTGTACGAATTGC...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDGLKLC*SMKVRE
Trigger: TTCCCTCACCTTCATGGACCAACATAACTTCAGTCC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGACATACATTCCACTTaGATAGGACCATATCGCAGC +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSDIHST*IGPYRS
Trigger: GCTGCGATATGGTCCTATCCAAGTGGAATGTATGTC...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTATATAACAGGTAACTaGAATCAATGCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIYITGN*NQCSGC
Trigger: ACACCCACTGCATTGATTTCAGTTACCTGTTATATA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCACTTCTTGCAATCTaGAAGAGGCAGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSLLAI*KRQQIF
Trigger: GAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGTGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCGTGGTTCTCTCACAATaGGTTGAGCAAAATTGGAAA +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVVVLSQ*VEQNWK
Trigger: TTTCCAATTTTGCTCAACTCATTGTGAGAGAACCAC...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAACCCATAGCTGTCTaGTGTCTTCATGAGGTTAAT +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDEPIAV*CLHEVN
Trigger: ATTAACCTCATGAAGACATCAGACAGCTATGGGTTC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR TCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTTCTTTGCTCTGTTTTaGTCCTTTTTAGCCACATCC +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSFFALF*SFLATS
Trigger: GGATGTGGCTAAAAAGGATCAAAACAGAGCAAAGAA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCGTATCTGGGTCTAAATaGCACAACTTATATGTTGGT +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFVSGSK*HNLYVG
Trigger: ACCAACATATAAGTTGTGGCATTTAGACCCAGATAC...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGGTATCTGGGTCTAAATaGCACAACTTATATGTTGGT +
Preference number: 4 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWVSGSK*HNLYVG
Trigger: ACCAACATATAAGTTGTGGCATTTAGACCCAGATAC...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGTTCTTCTGTTGCTGCTaGTTTTGTAGCAATTCGTAC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMFFCCC*FCSNSY
Trigger: GTACGAATTGCTACAAAAGCAGCAGCAACAGAAGAA...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTGGTTCTTCTGTTGCTaGTGCTTTTGTAGCAATTCG +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDWFFCC*CFCSNS
Trigger: CGAATTGCTACAAAAGCAGCAGCAACAGAAGAACCA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTTCTGGTTCTTCTGTTaGTGCTGCTTTTGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVFWFFC*CCFCSN
Trigger: ATTGCTACAAAAGCAGCAGCAACAGAAGAACCAGAA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTTCTGGTTCTTCTGTTaGTGCTGCTTTTGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAFWFFC*CCFCSN
Trigger: ATTGCTACAAAAGCAGCAGCAACAGAAGAACCAGAA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTCCGTATCGGTTCTTTaGTCTGTTTTGATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDSVSVL*SVLILF
Trigger: AAAAAGGATCAAAACAGAGCAAAGAACCGATACGGA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCTGGAGTGATCATATaGGATAATGTTTCCGTATCG +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASGVII*DNVSVS
Trigger: CGATACGGAAACATTATCGCATATGATCACTCCAGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTGCCATTTTTCCACCTaGAGTATCAATTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCCHFST*SINFKN
Trigger: GTTTTTGAAATTGATACTGCAGGTGGAAAAATGGCA...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CAGGCATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAAACATCCACCACATTTTaGCGCTTCACCATCTCCACA +
Preference number: 4 (lower is better)
Translates to: QACTQGNHYRKHCFLVYETSTTF*RFTIST
Trigger: TGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGT...TTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTTTATGTTCTTAGTCTaGGCTACGGGTATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAFMFLV*ATGMSS
Trigger: AGAAGACATACCCGTAGCCCAGACTAAGAACATAAA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACACATCTTCATCAGTTTaGATGATTGTCTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNTSSSV*MIVSSL
Trigger: GAGCGAAGAGACAATCATCCAAACTGATGAAGATGT...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCAATTCGTACACATTaGGTTTTAGTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMAIRTH*VLVSFS
Trigger: GGAGAAGGAAACTAAAACCCAATGTGTACGAATTGC...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGCAATTCGTACACATTaGGTTTTAGTTTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAAIRTH*VLVSFS
Trigger: GGAGAAGGAAACTAAAACCCAATGTGTACGAATTGC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCATCATTGGGCAATCTTaGACTGAAGTTATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSIIGQS*TEVMLV
Trigger: GACCAACATAACTTCAGTCCAAGATTGCCCAATGAT...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CCA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATCATTGGGCAATCTTaGACTGAAGTTATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLIIGQS*TEVMLV
Trigger: GACCAACATAACTTCAGTCCAAGATTGCCCAATGAT...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
3UTR CAA 72 bp TTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTaGGAAACATCAAAAAGAACACTGCGCCGCTACGGT +
Preference number: 4 (lower is better)
Translates to: FALSIVETQSLC*ETSKRTLRRYG
Trigger: ACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGTATCTGGGTCTAAATaGCACAACTTATATGTTGGT +
Preference number: 4 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQVSGSK*HNLYVG
Trigger: ACCAACATATAAGTTGTGGCATTTAGACCCAGATAC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGGTCAAATGATCTTATaGTGCTATAGCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSGQMIL*CYSSPH
Trigger: ATGAGGTGAGCTATAGCAGCATAAGATCATTTGACC...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGGTCAAATGATCTTATaGTGCTATAGCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDGQMIL*CYSSPH
Trigger: ATGAGGTGAGCTATAGCAGCATAAGATCATTTGACC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCCGTATCGGTTCTTTaGTCTGTTTTGATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASVSVL*SVLILF
Trigger: AAAAAGGATCAAAACAGAGCAAAGAACCGATACGGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCTGGAGTGATCATATaGGATAATGTTTCCGTATCG +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSGVII*DNVSVS
Trigger: CGATACGGAAACATTATCGCATATGATCACTCCAGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCCATTTTTCCACCTaGAGTATCAATTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFCHFST*SINFKN
Trigger: GTTTTTGAAATTGATACTGCAGGTGGAAAAATGGCA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGGCTTCAAATATTACCTaGTATTCATTGGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAASNIT*YSLGQK
Trigger: CTTTTGGCCCAATGAATACCAGGTAATATTTGAAGC...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCTTCAAATATTACCTaGTATTCATTGGGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMASNIT*YSLGQK
Trigger: CTTTTGGCCCAATGAATACCAGGTAATATTTGAAGC...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACTTGGATGTCATCAATaGCAATATAACCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSLGCHQ*QYNHFS
Trigger: GGAGAAGTGGTTATATTGCCATTGATGACATCCAAG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAACATCTTCATCAGTTTaGATGATTGTCTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRTSSSV*MIVSSL
Trigger: GAGCGAAGAGACAATCATCCAAACTGATGAAGATGT...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TATGTGGGGCACATGAATGAGACCACACATCTATTTGCACTGTCTATTGTAGAACAGACATCTGTCAGGTaGGAGCATATCCATGAAACG +
Preference number: 4 (lower is better)
Translates to: YVGHMNETTHLFALSIVEQTSVR*EHIHET
Trigger: CGTTTCATGGATATGCTCCCACCTGACAGATGTCTG...TTCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGTGGTTCTCATATCTTaGACTGAAGTTATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDVVLIS*TEVMLV
Trigger: GACCAACATAACTTCAGTCCAAGATATGAGAACCAC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
3UTR CAA 72 bp CATCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTaGTGCTTGGAAACATCAAAAAGAACACTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLFALSIVETQS*CLETSKRTLRR
Trigger: GCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGTCCAGGATCATGATTTaGGGAGTCCACAACCATATA +
Preference number: 4 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGESRIMI*GVHNHI
Trigger: TATATGGTTGTGGACTCCTCAAATCATGATCCTGGA...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTATATAACAGGTAACTaGAATCAATGCAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDYITGN*NQCSGC
Trigger: ACACCCACTGCATTGATTTCAGTTACCTGTTATATA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACTCCGTATCGGTTCTTTaGTCTGTTTTGATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDSVSVL*SVLILF
Trigger: AAAAAGGATCAAAACAGAGCAAAGAACCGATACGGA...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR GCA 90 bp CATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATAAACAGGCAGACTGCTCTTaGCACACCATCCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HVHKGTTTENIASWFMNKQADCS*HTILQK
Trigger: TTTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTG...TTTATTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTGCCATTTTTCCACCTaGAGTATCAATTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSCHFST*SINFKN
Trigger: GTTTTTGAAATTGATACTGCAGGTGGAAAAATGGCA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CCA 90 bp TATGTGGGGCACATGAATGAGACCACACATCTATTTGCACTGTCTATTGTAGAACCACAACTTATATGTTaGTGCGTTGACTGCATGGGT +
Preference number: 4 (lower is better)
Translates to: YVGHMNETTHLFALSIVEPQLIC*CVDCMG
Trigger: ACCCATGCAGTCAACGCACCAACATATAAGTTGTGG...TTCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR TCA 90 bp CATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATAAACCTGTAGCAATGCACTaGAATGTAGCATTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HVHKGTTTENIASWFMNKPVAMH*NVAFCP
Trigger: TGGGCAGAATGCTACATTTCAGTGCATTGCTACAGG...TTTATTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp CAGGCATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAAGTTTTTGTCACTTCTTaGAATCTGAAAGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QACTQGNHYRKHCFLVYEVFVTS*NLKEAA
Trigger: TGCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAAC...TTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp TATGTGGGGCACATGAATGAGACCACACATCTATTTGCACTGTCTATTGTAGAAGCAATGCGCCTTGCCTaGATTTCAGCAATCTTTAAA +
Preference number: 4 (lower is better)
Translates to: YVGHMNETTHLFALSIVEAMRLA*ISAIFK
Trigger: TTTAAAGATTGCTGAAATCCAGGCAAGGCGCATTGC...TTCTACAATAGACAGTGCAAATAGATGTGTGGTCTCATTCATGTGCCCCACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp CATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATAAATCAAAGGATGTTCCTTaGAGGGATTTGACTGGCACA +
Preference number: 4 (lower is better)
Translates to: HVHKGTTTENIASWFMNKSKDVP*RDLTGT
Trigger: TGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGA...TTTATTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR GCA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAATTCTTCTGTTGCTGCTaGTTTTGTAGCAATTCGTAC +
Preference number: 4 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKFFCCC*FCSNSY
Trigger: GTACGAATTGCTACAAAAGCAGCAGCAACAGAAGAA...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CCA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAACTTGGATGTCATCAATaGCAATATAACCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKLGCHQ*QYNHFS
Trigger: GGAGAAGTGGTTATATTGCCATTGATGACATCCAAG...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS CCA 90 bp TGGTGTCCGCATAGGTTCTGCACACTTCGTTCTAGTGATCAGTGGTaGTCCTGGCAGCCCAGTTCCCCCTTCGCCAGGTCTGGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: WCPHRFCTLRSSDQW*SWQPSSPFARSGKQ
Trigger: CTGCTTACCAGACCTGGCGAAGGGGGAACTGGGCTGCCAGGACCACCACTGATCACTAGAACGAAGTGTGCAGAACCTATGCGGACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 90 bp GCCAGCACTGATGCCCGCGATTTTCACCACTCTGTCTGTCTGCTTTaGCGGGTCTGGGATCACTTCTGGTTCTTCTGTTGCTGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ASTDARDFHHSVCLL*RVWDHFWFFCCCCF
Trigger: AAAGCAGCAGCAACAGAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAGTGGTGAAAATCGCGGGCATCAGTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 90 bp AGGATGCCAGCACTGATGCCCGCGATTTTCACCACTCTGTCTGTCTaGTTTGCCGGGTCTGGGATCACTTCTGGTTCTTCTGTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RMPALMPAIFTTLSV*FAGSGITSGSSVAA
Trigger: AGCAGCAACAGAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAGTGGTGAAAATCGCGGGCATCAGTGCTGGCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp CATTTGTGTAAGGTGGCAGATGGTTCACAACATGCTGAGGGGCTTTaGGGTCCATGTCCAAGCAGTCTGCCCTGCTCTCATTGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: HLCKVADGSQHAEGL*GPCPSSLPCSHCGH
Trigger: GTGGCCACAATGAGAGCAGGGCAGACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCATCTGCCACCTTACACAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp CATCCACCACATTTTGCCGCTTCACCATCTCCACAACAATGCCTATaGCACAGAACATGCCACTGCGCCCACCGCCATTCAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: HPPHFAASPSPQQCL*HRTCHCAHRHSSSG
Trigger: TCCACTGCTTGAATGGCGGTGGGCGCAGTGGCATGTTCTGTGCCATAGGCATTGTTGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 90 bp GGAAAACATCCACCACATTTTGCCGCTTCACCATCTCCACAACAATaGCTATGGCACAGAACATGCCACTGCGCCCACCGCCATTCAAGC +
Preference number: 5 (lower is better)
Translates to: GKHPPHFAASPSPQQ*LWHRTCHCAHRHSS
Trigger: GCTTGAATGGCGGTGGGCGCAGTGGCATGTTCTGTGCCATAGGCATTGTTGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGGGCTTCCACCATGTTaGGCTTGCTGTTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSGLPPC*ACCSSA
Trigger: CGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCCC...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp GTCGGCACAAGTGGATCATTGGGCAATCTTGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGCATGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VGTSGSLGNLGLKLC*SMKVRERGSSACRV
Trigger: CACCCTGCATGCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATTGCCCAATGATCCACTTGTGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS CCA 90 bp TATCGAGGAACATCCAGGAGACGACTAGACTCTGCTGTGGCACTGTaGTTCTCATCGGTTATAGGGACTAACACGGCAGTCGGCACAAGT +
Preference number: 5 (lower is better)
Translates to: YRGTSRRRLDSAVAL*FSSVIGTNTAVGTS
Trigger: ACTTGTGCCGACTGCCGTGTTAGTCCCTATAACCGATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGTTCCTCGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218276.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCTCTGTCTGTCTGCTTaGCCGGGTCTGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWLCLSA*PGLGSL
Trigger: AAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCTCTGTCTGTCTGCTTaGCCGGGTCTGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFLCLSA*PGLGSL
Trigger: AAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAG...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGGGCTTCCACCATGTTaGGCTTGCTGTTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAGLPPC*ACCSSA
Trigger: CGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCCC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp TCTGCTGTGGCACTGTGGTTCTCATATCTTGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGCATGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SAVALWFSYLGLKLC*SMKVRERGSSACRV
Trigger: CACCCTGCATGCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATATGAGAACCACAGTGCCACAGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTGCATTCTGCCCAGCATaGACCTCCACATCACCAAGG +
Preference number: 5 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAAFCPA*TSTSPR
Trigger: CCTTGGTGATGTGGAGGTCAATGCTGGGCAGAATGC...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACGCATTCTGCCCAGCATaGACCTCCACATCACCAAGG +
Preference number: 5 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNAFCPA*TSTSPR
Trigger: CCTTGGTGATGTGGAGGTCAATGCTGGGCAGAATGC...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAAGCATTCTGCCCAGCATaGACCTCCACATCACCAAGG +
Preference number: 5 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKAFCPA*TSTSPR
Trigger: CCTTGGTGATGTGGAGGTCAATGCTGGGCAGAATGC...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCCCACTGCAATGCGCCTaGCCTGGATTTCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLPLQCA*PGFQQS
Trigger: AGATTGCTGAAATCCAGGCAAGGCGCATTGCAGTGG...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATCCACTGCAATGCGCCTaGCCTGGATTTCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDPLQCA*PGFQQS
Trigger: AGATTGCTGAAATCCAGGCAAGGCGCATTGCAGTGG...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCTGATAGGAGCACCTTaGGCTTGTGCAGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWLIGAP*ACAGLN
Trigger: ATTGAGGCCTGCACAAGCCAAAGGTGCTCCTATCAG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCCTCTGTCTGTCTGCTTaGCCGGGTCTGGGATCACTT +
Preference number: 5 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSLCLSA*PGLGSL
Trigger: AAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAG...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCTTGCAATGTAGTGGCTaGGTCTCTGGTAGCCATCCC +
Preference number: 5 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLLQCSG*VSGSHP
Trigger: GGGATGGCTACCAGAGACCAAGCCACTACATTGCAA...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTTGCAATGTAGTGGCTaGGTCTCTGGTAGCCATCCC +
Preference number: 5 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFLQCSG*VSGSHP
Trigger: GGGATGGCTACCAGAGACCAAGCCACTACATTGCAA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGACAGGCAGACTGCTCTaGCCACACCATCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALTGRLL*PHHPPK
Trigger: TTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTGT...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAAGCAGGAGAGAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCAATGACAGGAGCCCTGTaGCGTGGTATGGAACACCAT +
Preference number: 5 (lower is better)
Translates to: KAGEKRLCGHWTDTDHFSMTGAL*RGMEHH
Trigger: ATGGTGTTCCATACCACGCAACAGGGCTCCTGTCAT...TGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTCTCTCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAATGACAGGAGCCCTGTaGCGTGGTATGGAACACCAT +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSMTGAL*RGMEHH
Trigger: ATGGTGTTCCATACCACGCAACAGGGCTCCTGTCAT...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAACCCAAAGCTTGTGCTTGGAAACATCAAAAAGAACACTGCGCCGCTACGGTGTCTTGTCATGGTTCCTaGGCAGGCAGGCTATGCTGC +
Preference number: 5 (lower is better)
Translates to: KPKACAWKHQKEHCAATVSCHGS*AGRLCC
Trigger: GCAGCATAGCCTGCCTGCCAAGGAACCATGACAAGA...CACCGTAGCGGCGCAGTGTTCTTTTTGATGTTTCCAAGCACAAGCTTTGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTCTTGTCATGGTTCCTaGGCAGGCAGGCTATGCTGC +
Preference number: 5 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDASCHGS*AGRLCC
Trigger: GCAGCATAGCCTGCCTGCCAAGGAACCATGACAAGA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCGTTTGGCAGTGGGTATaGTGTGACGATGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGVWQWV*CDDESC
Trigger: GCAGCTTTCATCGTCACACAATACCCACTGCCAAAC...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CAA 90 bp CCCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGGTTTGGCAGTGGGTATaGTGTGACGATGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: PTPYIKISRCSNRYNSCWVWQWV*CDDESC
Trigger: GCAGCTTTCATCGTCACACAATACCCACTGCCAAAC...CCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGGGCTTCCACCATGTTaGGCTTGCTGTTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTGLPPC*ACCSSA
Trigger: CGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCCC...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCGGTATGTCTTCTCCATaGCGTCTCTGCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLGMSSP*RLCSHN
Trigger: GTTATGGCTGCAGAGACGCAATGGAGAAGACATACC...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACCACTGCAATGCGCCTaGCCTGGATTTCAGCAATCT +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQPLQCA*PGFQQS
Trigger: AGATTGCTGAAATCCAGGCAAGGCGCATTGCAGTGG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCTTCCTTCCCTCTGGGTaGGTTAGGATCATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLFLPSG*VRIILR
Trigger: CCTCAAGATGATCCTAACCAACCCAGAGGGAAGGAA...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTGCTGGTCCAAAGCCTTaGACAGTGCTGGCTCTTATA +
Preference number: 5 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWIAGPKP*TVLALI
Trigger: TATAAGAGCCAGCACTGTCAAAGGCTTTGGACCAGC...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCTGATAGGAGCACCTTaGGCTTGTGCAGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLLIGAP*ACAGLN
Trigger: ATTGAGGCCTGCACAAGCCAAAGGTGCTCCTATCAG...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCTGATAGGAGCACCTTaGGCTTGTGCAGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVLIGAP*ACAGLN
Trigger: ATTGAGGCCTGCACAAGCCAAAGGTGCTCCTATCAG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTGGACTGAAGTTATGTaGGTCCATGAAGGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGWTEVM*VHEGEG
Trigger: TCCCTCACCTTCATGGACCAACATAACTTCAGTCCA...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CAA 90 bp GCCACTTACAAAGTGCATGCAATGTGTGGTAGCTGCTCTACAGAAAGCAGGAGAGTCATCTTCCACAGGTaGCAGGATGACTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: ATYKVHAMCGSCSTESRRVIFHR*QDDSGV
Trigger: CACTCCAGAGTCATCCTGCAACCTGTGGAAGATGAC...TCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGTCATCTTCCACAGGTaGCAGGATGACTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLVIFHR*QDDSGV
Trigger: CACTCCAGAGTCATCCTGCAACCTGTGGAAGATGAC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATTGCAATGTAGTGGCTaGGTCTCTGGTAGCCATCCC +
Preference number: 5 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKLQCSG*VSGSHP
Trigger: GGGATGGCTACCAGAGACCAAGCCACTACATTGCAA...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTTCATGAACTGGGCCTaGAGTTGCAATGTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: PPRTLKSLGAVTGTTAAGFMNWA*SCNVVA
Trigger: AGCCACTACATTGCAACTCAAGGCCCAGTTCATGAA...GCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACAGGCAGACTGCTCTaGCCACACCATCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLTGRLL*PHHPPK
Trigger: TTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTGT...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAACAGGCAGACTGCTCTaGCCACACCATCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQTGRLL*PHHPPK
Trigger: TTTTGGAGGATGGTGTGGCAAGAGCAGTCTGCCTGT...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATCTTGTCATGGTTCCTaGGCAGGCAGGCTATGCTGC +
Preference number: 5 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSSCHGS*AGRLCC
Trigger: GCAGCATAGCCTGCCTGCCAAGGAACCATGACAAGA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGTCCATGAAACGGTTCTaGTCATGGTTCCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWSMKRF*SWFLGR
Trigger: CCTGCCAAGGAACCATGACAAGAACCGTTTCATGGA...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCCATGAAACGGTTCTaGTCATGGTTCCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SLGAVTGTTAAGSTDEWISMKRF*SWFLGR
Trigger: CCTGCCAAGGAACCATGACAAGAACCGTTTCATGGA...AATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCATTCAAAAACGAGCGTTaGGAGCCAGGCACTTCTCGA +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSFKNER*EPGTSR
Trigger: TCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAA...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCAAAAACGAGCGTTaGGAGCCAGGCACTTCTCGA +
Preference number: 5 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDFKNER*EPGTSR
Trigger: TCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 90 bp CCCTTCACAGAGGTATCGAGGAACATCCAGGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTCATATCTTGGACTGAAGTTATGTTG +
Preference number: 5 (lower is better)
Translates to: PFTEVSRNIQETTRL*CGTVVLISWTEVML
Trigger: CAACATAACTTCAGTCCAAGATATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGTTCCTCGATACCTCTGTGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS CCA 90 bp GGCTCTTTCCAGTTCAGGAAGATCTTGTTTTCAAAGGATGTTCCTTaGAGGGATTTGACTGGCACAGGCCCGGGCACATCTTCATCAGTT +
Preference number: 5 (lower is better)
Translates to: GSFQFRKILFSKDVP*RDLTGTGPGTSSSV
Trigger: AACTGATGAAGATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAGATCTTCCTGAACTGGAAAGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp GCCCCTCCTTTCCAAGGTGAATGTCCTAACGACATACTCAGCAAGTaGCTCCATTTCTACGCAGGTGACTTTGAAGTCACCATAAACCTC +
Preference number: 5 (lower is better)
Translates to: APPFQGECPNDILSK*LHFYAGDFEVTINL
Trigger: GAGGTTTATGGTGACTTCAAAGTCACCTGCGTAGAAATGGAGCCACTTGCTGAGTATGTCGTTAGGACATTCACCTTGGAAAGGAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp CTTGCCATTTTTCCACCTGCAGTATCAATTTCAAAAACGAGCGTTTaGAGCCAGGCACTTCTCGATGAGAAGCCCAGCCTAGGTACTGGA +
Preference number: 5 (lower is better)
Translates to: LAIFPPAVSISKTSV*SQALLDEKPSLGTG
Trigger: TCCAGTACCTAGGCTGGGCTTCTCATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAAATTGATACTGCAGGTGGAAAAATGGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp GAAAAGGCTGTGTGGTCACTGGACAGACACAGACCACTTCTCATCCAAATCTGCCTCTGCAGCCATAACTaGTTATGCACAGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: EKAVWSLDRHRPLLIQICLCSHN*LCTASL
Trigger: GAGAGATGCTGTGCATAACAAGTTATGGCTGCAGAG...GCAGATTTGGATGAGAAGTGGTCTGTGTCTGTCCAGTGACCACACAGCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACTCTGCAGCCATAACTaGTTATGCACAGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSLCSHN*LCTASL
Trigger: GAGAGATGCTGTGCATAACAAGTTATGGCTGCAGAG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCGGTATGTCTTCTCCATaGCGTCTCTGCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLGMSSP*RLCSHN
Trigger: GTTATGGCTGCAGAGACGCAATGGAGAAGACATACC...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGGTATGTCTTCTCCATaGCGTCTCTGCAGCCATAAC +
Preference number: 5 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSGMSSP*RLCSHN
Trigger: GTTATGGCTGCAGAGACGCAATGGAGAAGACATACC...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTTCCTTCCCTCTGGGTaGGTTAGGATCATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: WLNRRMDFCLDALQIVSAFLPSG*VRIILR
Trigger: CCTCAAGATGATCCTAACCAACCCAGAGGGAAGGAA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTTCCTTCCCTCTGGGTaGGTTAGGATCATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDAFLPSG*VRIILR
Trigger: CCTCAAGATGATCCTAACCAACCCAGAGGGAAGGAA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGCTGGTCCAAAGCCTTaGACAGTGCTGGCTCTTATA +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQAGPKP*TVLALI
Trigger: TATAAGAGCCAGCACTGTCAAAGGCTTTGGACCAGC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGTCATCTTCCACAGGTaGCAGGATGACTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTVIFHR*QDDSGV
Trigger: CACTCCAGAGTCATCCTGCAACCTGTGGAAGATGAC...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGTTCATGAACTGGGCCTaGAGTTGCAATGTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALFMNWA*SCNVVA
Trigger: AGCCACTACATTGCAACTCAAGGCCCAGTTCATGAA...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGACAGGAGCCCTGTaGCGTGGTATGGAACACCAT +
Preference number: 5 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRMTGAL*RGMEHH
Trigger: ATGGTGTTCCATACCACGCAACAGGGCTCCTGTCAT...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTTCAAAAACGAGCGTTaGGAGCCAGGCACTTCTCGA +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVFKNER*EPGTSR
Trigger: TCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTCTTCACATTCCTCTaGCCATTTTTCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCFFTFL*PFFHLQ
Trigger: CTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGAA...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAAACATCCACCACATTTaGCCGCTTCACCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQNIHHI*PLHHLH
Trigger: GTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTT...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGAACATCCACCACATTTaGCCGCTTCACCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: WLNRRMDFCLDALQIVSANIHHI*PLHHLH
Trigger: GTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTT...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp GCCACTTACAAAGTGCATGCAATGTGTGGTAGCTGCTCTACAGAAAGCAGGAGATCCACCATGTTTGGCTaGCTGTTCCTCAGCGTCTTT +
Preference number: 5 (lower is better)
Translates to: ATYKVHAMCGSCSTESRRSTMFG*LFLSVF
Trigger: AAAGACGCTGAGGAACAGCAAGCCAAACATGGTGGA...TCTCCTGCTTTCTGTAGAGCAGCTACCACACATTGCATGCACTTTGTAAGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCCACCATGTTTGGCTaGCTGTTCCTCAGCGTCTTT +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVSTMFG*LFLSVF
Trigger: AAAGACGCTGAGGAACAGCAAGCCAAACATGGTGGA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACTCCACCATGTTTGGCTaGCTGTTCCTCAGCGTCTTT +
Preference number: 5 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNSTMFG*LFLSVF
Trigger: AAAGACGCTGAGGAACAGCAAGCCAAACATGGTGGA...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp TTTCACCACTCTGTCTGTCTGCTTTGCCGGGTCTGGGATCACTTCTaGTTCTTCTGTTGCTGCTGCTTTTGTAGCAATTCGTACACATTG +
Preference number: 5 (lower is better)
Translates to: FHHSVCLLCRVWDHF*FFCCCCFCSNSYTL
Trigger: CAATGTGTACGAATTGCTACAAAAGCAGCAGCAACAGAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAGTGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGATTACCTGGTATTCATaGGGCCAAAAGGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALITWYS*GQKVLT
Trigger: TGTGAGCACCTTTTGGCCCAATGAATACCAGGTAAT...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCCTCTGCAGCCATAACTaGTTATGCACAGCATCTCTC +
Preference number: 5 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSLCSHN*LCTASL
Trigger: GAGAGATGCTGTGCATAACAAGTTATGGCTGCAGAG...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCCACATCTTCATCAGTTaGGATGATTGTCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCHIFIS*DDCLFA
Trigger: AGCGAAGAGACAATCATCCAAACTGATGAAGATGTG...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAATTCAAAGGATGTTCCTaGGAGGGATTTGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQFKGCS*EGFDWH
Trigger: GTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAA...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGCTGCTCCACAACAATTaGATAAGCACTGATAGGAGC +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWLLHNN*ISTDRS
Trigger: GCTCCTATCAGTGCTTATCAAATTGTTGTGGAGCAG...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTTCATGAACTGGGCCTaGAGTTGCAATGTAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVFMNWA*SCNVVA
Trigger: AGCCACTACATTGCAACTCAAGGCCCAGTTCATGAA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGTTTGGCAGTGGGTATaGTGTGACGATGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDVWQWV*CDDESC
Trigger: GCAGCTTTCATCGTCACACAATACCCACTGCCAAAC...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAAGACATACATTCCACTaGGATAGGACCATATCGCAG +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSRHTFH*DRTISQ
Trigger: CTGCGATATGGTCCTATCCAAGTGGAATGTATGTCT...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAAACATCCACCACATTTaGCCGCTTCACCATCTCCAC +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTNIHHI*PLHHLH
Trigger: GTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTT...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp ATATACGGTTTCATGAACTGGGCCTTGAGTTGCAATGTAGTGGCTTaGTCTCTGGTAGCCATCCCTGTACAGCCAAATGTCGATGTAGTT +
Preference number: 5 (lower is better)
Translates to: IYGFMNWALSCNVVA*SLVAIPVQPNVDVV
Trigger: AACTACATCGACATTTGGCTGTACAGGGATGGCTACCAGAGACCAAGCCACTACATTGCAACTCAAGGCCCAGTTCATGAAACCGTATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACATTACCTGGTATTCATaGGGCCAAAAGGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: PYIKISRCSNRYNSCWLNITWYS*GQKVLT
Trigger: TGTGAGCACCTTTTGGCCCAATGAATACCAGGTAAT...GTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATTACCTGGTATTCATaGGGCCAAAAGGTGCTCACA +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLITWYS*GQKVLT
Trigger: TGTGAGCACCTTTTGGCCCAATGAATACCAGGTAAT...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAGTTTTTGTCACTTCTaGCAATCTGAAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: TPYIKISRCSNRYNSCWLSFCHF*QSERGS
Trigger: GCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAACT...GAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGTTCTCTCACAATGAGTaGAGCAAAATTGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: RYNSCWLNRRMDFCLDALFSHNE*SKIGNP
Trigger: GGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGAA...CAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTCTCACAATGAGTaGAGCAAAATTGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDFSHNE*SKIGNP
Trigger: GGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGAA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTCGCCAATAATAGAGTaGGCATTTAGTTGGATCAGC +
Preference number: 5 (lower is better)
Translates to: ISRCSNRYNSCWLNRRMDSPIIE*AFSWIS
Trigger: GCTGATCCAACTAAATGCCAACTCTATTATTGGCGA...ATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTTATATGTTGGTGCGTaGACTGCATGGGTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: WLNRRMDFCLDALQIVSALYVGA*TAWVSV
Trigger: GACAGAAACCCATGCAGTCAACGCACCAACATATAA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTTTATATGTTGGTGCGTaGACTGCATGGGTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: NRYNSCWLNRRMDFCLDALYVGA*TAWVSV
Trigger: GACAGAAACCCATGCAGTCAACGCACCAACATATAA...AGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTTATATGTTGGTGCGTaGACTGCATGGGTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVLYVGA*TAWVSV
Trigger: GACAGAAACCCATGCAGTCAACGCACCAACATATAA...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATTCAAAGGATGTTCCTaGGAGGGATTTGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSFKGCS*EGFDWH
Trigger: GTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACTTCAAAGGATGTTCCTaGGAGGGATTTGACTGGCAC +
Preference number: 5 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDFKGCS*EGFDWH
Trigger: GTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAA...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCCACACTGCTCATCGCTaGGAAATAGATGTTGTATCC +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVHTAHR*EIDVVS
Trigger: GGATACAACATCTATTTCCAAGCGATGAGCAGTGTG...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACACACTGCTCATCGCTaGGAAATAGATGTTGTATCC +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQHTAHR*EIDVVS
Trigger: GGATACAACATCTATTTCCAAGCGATGAGCAGTGTG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGCACACTGCTCATCGCTaGGAAATAGATGTTGTATCC +
Preference number: 5 (lower is better)
Translates to: KISRCSNRYNSCWLNRRMHTAHR*EIDVVS
Trigger: GGATACAACATCTATTTCCAAGCGATGAGCAGTGTG...CATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCCGCTTCTTAGCAAGCTaGCTCTTTTTCACAATTACT +
Preference number: 5 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCRFLAS*LFFTIT
Trigger: AGTAATTGTGAAAAAGAGCAAGCTTGCTAAGAAGCG...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCATGGACTGAAGTTATGTaGGTCCATGAAGGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSWTEVM*VHEGEG
Trigger: TCCCTCACCTTCATGGACCAACATAACTTCAGTCCA...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCGTTCTTTGCTCTGTTTaGATCCTTTTTAGCCACATC +
Preference number: 5 (lower is better)
Translates to: RCSNRYNSCWLNRRMDFCVLCSV*ILFSHI
Trigger: GATGTGGCTAAAAAGGATCAAAACAGAGCAAAGAAC...GCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGAGACATACATTCCACTaGGATAGGACCATATCGCAG +
Preference number: 5 (lower is better)
Translates to: WLNRRMDFCLDALQIVSARHTFH*DRTISQ
Trigger: CTGCGATATGGTCCTATCCAAGTGGAATGTATGTCT...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 90 bp ATCCCTGTACAGCCAAATGTCGATGTAGTTGGCATTAATGTAATCTaGAGAAGGGTCATCTTCCACAGGTTGCAGGATGACTCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: IPVQPNVDVVGINVI*RRVIFHRLQDDSGV
Trigger: CACTCCAGAGTCATCCTGCAACCTGTGGAAGATGACCCTTCTTCAGATTACATTAATGCCAACTACATCGACATTTGGCTGTACAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCAGGATAACTCAGGACTaGGATGTCATCAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: SCWLNRRMDFCLDALQIVRITQD*DVINGN
Trigger: ATTGCCATTGATGACATCCAAGTCCTGAGTTATCCT...GACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCGTCGCCAATAATAGAGTaGGCATTTAGTTGGATCAGC +
Preference number: 5 (lower is better)
Translates to: WLNRRMDFCLDALQIVSASPIIE*AFSWIS
Trigger: GCTGATCCAACTAAATGCCAACTCTATTATTGGCGA...CGCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCCACATCTTCATCAGTTaGGATGATTGTCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSHIFIS*DDCLFA
Trigger: AGCGAAGAGACAATCATCCAAACTGATGAAGATGTG...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCACAGTTCAGGAAGATCTaGTTTTCAAAGGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSQFRKI*FSKDVP
Trigger: AGGAACATCCTTTGAAAACAAGATCTTCCTGAACTG...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCTACTATTCCATAAATTaGATACAGTCTGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLYYSIN*IQSVGA
Trigger: GGCCCCCACAGACTGTATCAAATTTATGGAATAGTA...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGGCTGGTCCAAAGCCTTaGACAGTGCTGGCTCTTATA +
Preference number: 5 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGEAGPKP*TVLALI
Trigger: TATAAGAGCCAGCACTGTCAAAGGCTTTGGACCAGC...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGACTGCTCCACAACAATTaGATAAGCACTGATAGGAGC +
Preference number: 5 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRLLHNN*ISTDRS
Trigger: GCTCCTATCAGTGCTTATCAAATTGTTGTGGAGCAG...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACACTGCTCCACAACAATTaGATAAGCACTGATAGGAGC +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTLLHNN*ISTDRS
Trigger: GCTCCTATCAGTGCTTATCAAATTGTTGTGGAGCAG...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCAGCAATTCGTACACATaGGGTTTTAGTTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFSNSYT*GFSFLL
Trigger: GAGAAGGAAACTAAAACCCAATGTGTACGAATTGCT...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGAGCAATTCGTACACATaGGGTTTTAGTTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWSNSYT*GFSFLL
Trigger: GAGAAGGAAACTAAAACCCAATGTGTACGAATTGCT...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGTTCCGTATCGGTTCTTaGCTCTGTTTTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: KSLGAVTGTTAAGSTDEWFRIGS*LCFDPF
Trigger: AAAAGGATCAAAACAGAGCAAAGAACCGATACGGAA...CCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAAGACATACATTCCACTaGGATAGGACCATATCGCAG +
Preference number: 5 (lower is better)
Translates to: IKISRCSNRYNSCWLNRRRHTFH*DRTISQ
Trigger: CTGCGATATGGTCCTATCCAAGTGGAATGTATGTCT...TCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTCACATCACAGTCCATaGAACAAGACATACATTCCA +
Preference number: 5 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFSHHSP*NKTYIP
Trigger: TGGAATGTATGTCTTGTTCAATGGACTGTGATGTGA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTTCTTCACATTCCTCTaGCCATTTTTCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDFFTFL*PFFHLQ
Trigger: CTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGAA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 90 bp TCTGAAGAAGGGTCATCTTCCACAGGTTGCAGGATGACTCTGGAGTaGTCATATGCGATAATGTTTCCGTATCGGTTCTTTGCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SEEGSSSTGCRMTLE*SYAIMFPYRFFALF
Trigger: AAACAGAGCAAAGAACCGATACGGAAACATTATCGCATATGATCACTCCAGAGTCATCCTGCAACCTGTGGAAGATGACCCTTCTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAAGGATAACTCAGGACTaGGATGTCATCAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSRITQD*DVINGN
Trigger: ATTGCCATTGATGACATCCAAGTCCTGAGTTATCCT...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAAGTTTTTGTCACTTCTaGCAATCTGAAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTSFCHF*QSERGS
Trigger: GCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAACT...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACATTCTCTCACAATGAGTaGAGCAAAATTGGAAACCCC +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTFSHNE*SKIGNP
Trigger: GGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGAA...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACCACATCTTCATCAGTTaGGATGATTGTCTCTTCGCT +
Preference number: 5 (lower is better)
Translates to: TLKSLGAVTGTTAAGSTDHIFIS*DDCLFA
Trigger: AGCGAAGAGACAATCATCCAAACTGATGAAGATGTG...GTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAACAGTTCAGGAAGATCTaGTTTTCAAAGGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQQFRKI*FSKDVP
Trigger: AGGAACATCCTTTGAAAACAAGATCTTCCTGAACTG...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTACTATTCCATAAATTaGATACAGTCTGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDYYSIN*IQSVGA
Trigger: GGCCCCCACAGACTGTATCAAATTTATGGAATAGTA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCAATTCGTACACATaGGGTTTTAGTTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LLAQQTNGFLLGCSANSLSNSYT*GFSFLL
Trigger: GAGAAGGAAACTAAAACCCAATGTGTACGAATTGCT...GAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp ACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAAGTTCTTTGCTCTGTTTaGATCCTTTTTAGCCACATC +
Preference number: 5 (lower is better)
Translates to: TTAAGSTDEWISAWMLCKVLCSV*ILFSHI
Trigger: GATGTGGCTAAAAAGGATCAAAACAGAGCAAAGAAC...TTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAGTTCTTTGCTCTGTTTaGATCCTTTTTAGCCACATC +
Preference number: 5 (lower is better)
Translates to: YNSCWLNRRMDFCLDALQVLCSV*ILFSHI
Trigger: GATGTGGCTAAAAAGGATCAAAACAGAGCAAAGAAC...TTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CCCCGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCATGTGGTCTCGTTAGGTaGCATATTCTAAAAATTCGA +
Preference number: 5 (lower is better)
Translates to: PRTLKSLGAVTGTTAAGSCGLVR*HILKIR
Trigger: TCGAATTTTTAGAATATGCAACCTAACGAGACCACA...TGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGTGGTCTCGTTAGGTaGCATATTCTAAAAATTCGA +
Preference number: 5 (lower is better)
Translates to: SRCSNRYNSCWLNRRMDFCGLVR*HILKIR
Trigger: TCGAATTTTTAGAATATGCAACCTAACGAGACCACA...GAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCACAGTTCAGGAAGATCTaGTTTTCAAAGGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: CWLNRRMDFCLDALQIVSQFRKI*FSKDVP
Trigger: AGGAACATCCTTTGAAAACAAGATCTTCCTGAACTG...TGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CGTACATTAAAATCTCTCGGTGCAGTAACAGGTACAACAGCTGCTGGCTCAACATTCCGTATCGGTTCTTaGCTCTGTTTTGATCCTTTT +
Preference number: 5 (lower is better)
Translates to: RTLKSLGAVTGTTAAGSTFRIGS*LCFDPF
Trigger: AAAAGGATCAAAACAGAGCAAAGAACCGATACGGAA...TGTTGAGCCAGCAGCTGTTGTACCTGTTACTGCACCGAGAGATTTTAATGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGTAACAGGTACAACAGCTGCTGGCTCAACAGACGAATGGATTTCTGCTTGGATTCACATCACAGTCCATaGAACAAGACATACATTCCA +
Preference number: 5 (lower is better)
Translates to: SNRYNSCWLNRRMDFCLDSHHSP*NKTYIP
Trigger: TGGAATGTATGTCTTGTTCAATGGACTGTGATGTGA...ATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAGCAGCTGTTGTACCTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp CTGGCTCAACAGACGAATGGATTTCTGCTTGGATGCTCTGCAAATAGTCTCAGCTGTGGTCTCGTTAGGTaGCATATTCTAAAAATTCGA +
Preference number: 5 (lower is better)
Translates to: LAQQTNGFLLGCSANSLSCGLVR*HILKIR
Trigger: TCGAATTTTTAGAATATGCAACCTAACGAGACCACA...GCTGAGACTATTTGCAGAGCATCCAAGCAGAAATCCATTCGTCTGTTGAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 90 bp GAGGAGATTTATCGCAAGGATAACTCAGGACTTGGATGTCATCAATaGCAATATAACCACTTCTCCCTCCTGAGACTTCAGCTTCAAATA +
Preference number: 5 (lower is better)
Translates to: EEIYRKDNSGLGCHQ*QYNHFSLLRLQLQI
Trigger: TATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTCCTGAGTTATCCTTGCGATAAATCTCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAATCCATGAAACGGTTCTaGTCATGGTTCCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKSMKRF*SWFLGR
Trigger: CCTGCCAAGGAACCATGACAAGAACCGTTTCATGGA...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS TCA 90 bp GTTTTTGTCACTTCTTGCAATCTGAAAGAGGCAGCAAATCTTCTGTaGTTTATGTTCTTAGTCTGGGCTACGGGTATGTCTTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: VFVTSCNLKEAANLL*FMFLVWATGMSSPL
Trigger: CAATGGAGAAGACATACCCGTAGCCCAGACTAAGAACATAAATCACAGAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS-3UTR CAA 90 bp AGATTTCTCATAGGCAACCATCAAGCCATCATTTACCTAATGAAACTGGGGGAGCGCTTCTTAGCAAGCTaGCTCTTTTTCACAATTACT +
Preference number: 5 (lower is better)
Translates to: RFLIGNHQAIIYLMKLGERFLAS*LFFTIT
Trigger: AGTAATTGTGAAAAAGAGCAAGCTTGCTAAGAAGCG...CTCCCCCAGTTTCATTAGGTAAATGATGGCTTGATGGTTGCCTATGAGAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp CATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATAAATGGACTGAAGTTATGTaGGTCCATGAAGGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: HVHKGTTTENIASWFMNKWTEVM*VHEGEG
Trigger: TCCCTCACCTTCATGGACCAACATAACTTCAGTCCA...TTTATTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAATTCTTCACATTCCTCTaGCCATTTTTCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKFFTFL*PFFHLQ
Trigger: CTGCAGGTGGAAAAATGGCAAGAGGAATGTGAAGAA...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp CATGTACACAAGGGAACCACTACAGAAAACATTGCTTCCTGGTTTATGAATAAAAGTTTTTGTCACTTCTaGCAATCTGAAAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: HVHKGTTTENIASWFMNKSFCHF*QSERGS
Trigger: GCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAACT...TTTATTCATAAACCAGGAAGCAATGTTTTCTGTAGTGGTTCCCTTGTGTACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS-3UTR CAA 90 bp TCTATTTGCACTGTCTATTGTAGAAACCCAAAGCTTGTGCTTGGAAACATCAAATCACATCACAGTCCATaGAACAAGACATACATTCCA +
Preference number: 5 (lower is better)
Translates to: SICTVYCRNPKLVLGNIKSHHSP*NKTYIP
Trigger: TGGAATGTATGTCTTGTTCAATGGACTGTGATGTGA...TTTGATGTTTCCAAGCACAAGCTTTGGGTTTCTACAATAGACAGTGCAAATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS CCA 72 bp CCGCATAGGTTCTGCACACTTCGTTCTAGTGATCAGTaGTGGTCCTGGCAGCCCAGTTCCCCCTTCGCCAGG +
Preference number: 6 (lower is better)
Translates to: PHRFCTLRSSDQ*WSWQPSSPFAR
Trigger: CCTGGCGAAGGGGGAACTGGGCTGCCAGGACCACCACTGATCACTAGAACGAAGTGTGCAGAACCTATGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 72 bp GAGGGGCTTTGGGGTCCATGTCCAAGCAGTCTGCCCTaGTCTCATTGTGGCCACGGAAGTAATGGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: EGLWGPCPSSLP*SHCGHGSNGSR
Trigger: TCTGCTACCATTACTTCCGTGGCCACAATGAGAGCAGGGCAGACTGCTTGGACATGGACCCCAAAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp TTCTGCACACTTCGTTCTAGTGATCAGTGGTGGTCCTaGCAGCCCAGTTCCCCCTTCGCCAGGTCTGGTAAG +
Preference number: 6 (lower is better)
Translates to: FCTLRSSDQWWS*QPSSPFARSGK
Trigger: CTTACCAGACCTGGCGAAGGGGGAACTGGGCTGCCAGGACCACCACTGATCACTAGAACGAAGTGTGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp ACATGCCACTGCGCCCACCGCCATTCAAGCAGTGGATaGTTGTCCGGCCTTCCCCTTCTTCACATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: TCHCAHRHSSSG*LSGLPLLHIPL
Trigger: AAGAGGAATGTGAAGAAGGGGAAGGCCGGACAATCATCCACTGCTTGAATGGCGGTGGGCGCAGTGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp AAGGTGGCAGATGGTTCACAACATGCTGAGGGGCTTTaGGGTCCATGTCCAAGCAGTCTGCCCTGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: KVADGSQHAEGL*GPCPSSLPCSH
Trigger: ATGAGAGCAGGGCAGACTGCTTGGACATGGACCCCAAAGCCCCTCAGCATGTTGTGAACCATCTGCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp ACGACAATGGGCCCAGCACTGGGAGGGTTAGATAGCTaGACTCTCCGGATAAATGACAGGAGCCCTGTTGCG +
Preference number: 6 (lower is better)
Translates to: TTMGPALGGLDS*TLRINDRSPVA
Trigger: CGCAACAGGGCTCCTGTCATTTATCCGGAGAGTCAAGCTATCTAACCCTCCCAGTGCTGGGCCCATTGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS GCA 72 bp GATGCCCGCGATTTTCACCACTCTGTCTGTCTGCTTTaGCGGGTCTGGGATCACTTCTGGTTCTTCTGTTGC +
Preference number: 6 (lower is better)
Translates to: DARDFHHSVCLL*RVWDHFWFFCC
Trigger: GCAACAGAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAGTGGTGAAAATCGCGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 72 bp GCACTGATGCCCGCGATTTTCACCACTCTGTCTGTCTaGTTTGCCGGGTCTGGGATCACTTCTGGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ALMPAIFTTLSV*FAGSGITSGSS
Trigger: AGAAGAACCAGAAGTGATCCCAGACCCGGCAAAGCAGACAGACAGAGTGGTGAAAATCGCGGGCATCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp ACATCCAGGAGACGACTAGACTCTGCTGTGGCACTGTaGTTCTCATCTAACACGGCAGTCGGCACAAGTGGA +
Preference number: 6 (lower is better)
Translates to: TSRRRLDSAVAL*FSSNTAVGTSG
Trigger: TCCACTTGTGCCGACTGCCGTGTTAGATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166468.2
CDS GCA 72 bp GAGGTATCGAGGAACATCCAGGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTCATCGGTTATAGGGAC +
Preference number: 6 (lower is better)
Translates to: EVSRNIQETTRL*CGTVVLIGYRD
Trigger: GTCCCTATAACCGATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGTTCCTCGATACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218276.2
CDS CCA 72 bp ACATCCAGGAGACGACTAGACTCTGCTGTGGCACTGTaGTTCTCATCGGTTATAGGGACTAACACGGCAGTC +
Preference number: 6 (lower is better)
Translates to: TSRRRLDSAVAL*FSSVIGTNTAV
Trigger: GACTGCCGTGTTAGTCCCTATAACCGATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218276.2
CDS CAA 72 bp CATCTGTCAGGTGGGAGCATATCCATGAAACGGTTCTaGTCATGGTTCCTTGGCAGGCAGGCTATGCTGCAG +
Preference number: 6 (lower is better)
Translates to: HLSGGSISMKRF*SWFLGRQAMLQ
Trigger: CTGCAGCATAGCCTGCCTGCCAAGGAACCATGACAAGAACCGTTTCATGGATATGCTCCCACCTGACAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS TCA 72 bp TTCAAAAACGAGCGTTTGGAGCCAGGCACTTCTCGATaGGAAGCCCAGCCTAGGTACTGGAACTGTTGTACC +
Preference number: 6 (lower is better)
Translates to: FKNERLEPGTSR*EAQPRYWNCCT
Trigger: GGTACAACAGTTCCAGTACCTAGGCTGGGCTTCTCATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp GCAAAAACGATACTGCTCCGGGGCTTCCACCATGTTTaGCTTGCTGTTCCTCAGCGTCTTTACTGCATGGAA +
Preference number: 6 (lower is better)
Translates to: AKTILLRGFHHV*LAVPQRLYCME
Trigger: TTCCATGCAGTAAAGACGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCCCCGGAGCAGTATCGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp CCAGTTCAGGAAGATCTTGTTTTCAAAGGATGTTCCTaGGAGGGATTTGACTGGCACAGGCCCGGGCACATC +
Preference number: 6 (lower is better)
Translates to: PVQEDLVFKGCS*EGFDWHRPGHI
Trigger: GATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAGATCTTCCTGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp CTTCGGTCCATAGCATTCACCATGTGGGTCATCTCCTaGCGTGTGTTCCCCATTGCATCTTTGCGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: LRSIAFTMWVIS*RVFPIASLRFL
Trigger: TAAGAAGCGCAAAGATGCAATGGGGAACACACGTCAGGAGATGACCCACATGGTGAATGCTATGGACCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp AAAAAGGCAGACATCTGTCAGGTGGGAGCATATCCATaGAACGGTTCTTGTCATGGTTCCTTGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KKADICQVGAYP*NGSCHGSLAGR
Trigger: CCTGCCTGCCAAGGAACCATGACAAGAACCGTTTCATGGATATGCTCCCACCTGACAGATGTCTGCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS GCA 72 bp GAGGTATCGAGGAACATCCAGGAGACGACTAGACTCTaGTGTGGCACTGTGGTTCTCATATCTTGGACTGAA +
Preference number: 6 (lower is better)
Translates to: EVSRNIQETTRL*CGTVVLISWTE
Trigger: TTCAGTCCAAGATATGAGAACCACAGTGCCACAGCAGAGTCTAGTCGTCTCCTGGATGTTCCTCGATACCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS CCA 72 bp TTCATGAACTGGGCCTTGAGTTGCAATGTAGTGGCTTaGTCTCTGGTAGCCATCCCTGTACAGCCAAATGTC +
Preference number: 6 (lower is better)
Translates to: FMNWALSCNVVA*SLVAIPVQPNV
Trigger: GACATTTGGCTGTACAGGGATGGCTACCAGAGACCAAGCCACTACATTGCAACTCAAGGCCCAGTTCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp TGTAGCCCAAGGACTCCCAGTCCACTGCAATGCGCCTaGCCTGGATTTCAGCAATCTTTAAAGTCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: CSPRTPSPLQCA*PGFQQSLKSLV
Trigger: CACCAAAGACTTTAAAGATTGCTGAAATCCAGGCAAGGCGCATTGCAGTGGACTGGGAGTCCTTGGGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp AAACGATACTGCTCCGGGGCTTCCACCATGTTTGGCTaGCTGTTCCTCAGCGTCTTTACTGCATGGAAAACA +
Preference number: 6 (lower is better)
Translates to: KRYCSGASTMFG*LFLSVFTAWKT
Trigger: TGTTTTCCATGCAGTAAAGACGCTGAGGAACAGCAAGCCAAACATGGTGGAAGCCCCGGAGCAGTATCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp GGCACTGTGGTTCTCATATCTTGGACTGAAGTTATGTaGGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GTVVLISWTEVM*VHEGEGKGVFC
Trigger: GCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATATGAGAACCACAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS CAA 90 bp TGGCTCTTTCCAGTTCAGGAAGATCTTGTTTTCAAAGGATGTTCCTaGGAGGGATTTGACTGGCACAGGCCCGGGCACATCTTCATCAGT +
Preference number: 6 (lower is better)
Translates to: WLFPVQEDLVFKGCS*EGFDWHRPGHIFIS
Trigger: ACTGATGAAGATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAGATCTTCCTGAACTGGAAAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp GGAGCAATGGGTCTAGGTGGTTCTCTCACAATGAGTTaGGCAAAATTGGAAACCCCAGAACCTCGTTCTGAC +
Preference number: 6 (lower is better)
Translates to: GAMGLGGSLTMS*AKLETPEPRSD
Trigger: GTCAGAACGAGGTTCTGGGGTTTCCAATTTTGCTCAACTCATTGTGAGAGAACCACCTAGACCCATTGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 72 bp CACCATGTTTGGCTTGCTGTTCCTCAGCGTCTTTACTaGATGGAAAACATCCACCACATTTTGCCGCTTCAC +
Preference number: 6 (lower is better)
Translates to: HHVWLAVPQRLY*MENIHHILPLH
Trigger: GTGAAGCGGCAAAATGTGGTGGATGTTTTCCATGCAGTAAAGACGCTGAGGAACAGCAAGCCAAACATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp CTTGTTTTCAAAGGATGTTCCTTGGAGGGATTTGACTaGCACAGGCCCGGGCACATCTTCATCAGTTTGGAT +
Preference number: 6 (lower is better)
Translates to: LVFKGCSLEGFD*HRPGHIFISLD
Trigger: ATCCAAACTGATGAAGATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp AGTGGATCATTGGGCAATCTTGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SGSLGNLGLKLC*SMKVRERGSSA
Trigger: TGCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATTGCCCAATGATCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS CCA 72 bp TTTCCACCTGCAGTATCAATTTCAAAAACGAGCGTTTaGAGCCAGGCACTTCTCGATGAGAAGCCCAGCCTA +
Preference number: 6 (lower is better)
Translates to: FPPAVSISKTSV*SQALLDEKPSL
Trigger: TAGGCTGGGCTTCTCATCGAGAAGTGCCTGGCTCCAAACGCTCGTTTTTGAAATTGATACTGCAGGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp GCACTGTGGTTCTCATATCTTGGACTGAAGTTATGTTaGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: ALWFSYLGLKLC*SMKVRERGSSA
Trigger: TGCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATATGAGAACCACAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000218359.2
CDS CAA 72 bp AAGTGGATCATTGGGCAATCTTGGACTGAAGTTATGTaGGTCCATGAAGGTGAGGGAAAGGGGGTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: KWIIGQSWTEVM*VHEGEGKGVFC
Trigger: GCAGAAGACCCCCTTTCCCTCACCTTCATGGACCAACATAACTTCAGTCCAAGATTGCCCAATGATCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
CDS CAA 72 bp CAGCGTCTTTACTGCATGGAAAACATCCACCACATTTaGCCGCTTCACCATCTCCACAACAATGCCTATGGC +
Preference number: 6 (lower is better)
Translates to: QRLYCMENIHHI*PLHHLHNNAYG
Trigger: GCCATAGGCATTGTTGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTTTTCCATGCAGTAAAGACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 90 bp GCTGTTCCTCAGCGTCTTTACTGCATGGAAAACATCCACCACATTTaGCCGCTTCACCATCTCCACAACAATGCCTATGGCACAGAACAT +
Preference number: 6 (lower is better)
Translates to: AVPQRLYCMENIHHI*PLHHLHNNAYGTEH
Trigger: ATGTTCTGTGCCATAGGCATTGTTGTGGAGATGGTGAAGCGGCAAAATGTGGTGGATGTTTTCCATGCAGTAAAGACGCTGAGGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 90 bp CAGTTCAGGAAGATCTTGTTTTCAAAGGATGTTCCTTGGAGGGATTaGACTGGCACAGGCCCGGGCACATCTTCATCAGTTTGGATGATT +
Preference number: 6 (lower is better)
Translates to: QFRKILFSKDVPWRD*TGTGPGTSSSVWMI
Trigger: AATCATCCAAACTGATGAAGATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAGATCTTCCTGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp AGATCTTGTTTTCAAAGGATGTTCCTTGGAGGGATTTaGCTGGCACAGGCCCGGGCACATCTTCATCAGTTT +
Preference number: 6 (lower is better)
Translates to: RSCFQRMFLGGI*LAQARAHLHQF
Trigger: AAACTGATGAAGATGTGCCCGGGCCTGTGCCAGTCAAATCCCTCCAAGGAACATCCTTTGAAAACAAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 72 bp AGGACGCGGATCTCGTATTCTGTATCTGGGTCTAAATaGCACAACTTATATGTTGGTGCGTTGACTGCATGG +
Preference number: 6 (lower is better)
Translates to: RTRISYSVSGSK*HNLYVGALTAW
Trigger: CCATGCAGTCAACGCACCAACATATAAGTTGTGGCATTTAGACCCAGATACAGAATACGAGATCCGCGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS GCA 72 bp AGTGTTTGGCAGTGGGTATTGTGTGACGATGAAAGCTaGTGGCTGCCTATAGCTATCCATAAGAGCAGCATT +
Preference number: 6 (lower is better)
Translates to: SVWQWVLCDDES*WLPIAIHKSSI
Trigger: AATGCTGCTCTTATGGATAGCTATAGGCAGCCAGCAGCTTTCATCGTCACACAATACCCACTGCCAAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS CCA 72 bp TTCCAAGGTGAATGTCCTAACGACATACTCAGCAAGTaGCTCCATTTCTACGCAGGTGACTTTGAAGTCACC +
Preference number: 6 (lower is better)
Translates to: FQGECPNDILSK*LHFYAGDFEVT
Trigger: GGTGACTTCAAAGTCACCTGCGTAGAAATGGAGCCACTTGCTGAGTATGTCGTTAGGACATTCACCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp GTTTGGCAGTGGGTATTGTGTGACGATGAAAGCTGCTaGCTGCCTATAGCTATCCATAAGAGCAGCATTGAT +
Preference number: 6 (lower is better)
Translates to: VWQWVLCDDESC*LPIAIHKSSID
Trigger: ATCAATGCTGCTCTTATGGATAGCTATAGGCAGCCAGCAGCTTTCATCGTCACACAATACCCACTGCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS CAA 72 bp GCAGCTGAAGTCTGGCTTTTTCTCCAGGATCATGATTaGAGGAGTCCACAACCATATAGGAACCTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: AAEVWLFLQDHD*RSPQPYRNLEA
Trigger: TGCCTCAAGGTTCCTATATGGTTGTGGACTCCTCAAATCATGATCCTGGAGAAAAAGCCAGACTTCAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp TCAGGTAAGCTTGGAGCTGAGATATTTGTGGTCACATaGATGGCTGTTGCTGGTCCAAAGCCTTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: SGKLGAEIFVVT*MAVAGPKPLTV
Trigger: CACTGTCAAAGGCTTTGGACCAGCAACAGCCATCAATGTGACCACAAATATCTCAGCTCCAAGCTTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp CAGCTGAAGTCTGGCTTTTTCTCCAGGATCATGATTTaGGGAGTCCACAACCATATAGGAACCTTGAGGCAT +
Preference number: 6 (lower is better)
Translates to: QLKSGFFSRIMI*GVHNHIGTLRH
Trigger: ATGCCTCAAGGTTCCTATATGGTTGTGGACTCCTCAAATCATGATCCTGGAGAAAAAGCCAGACTTCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp CTGGGTCTAAATGCCACAACTTATATGTTGGTGCGTTaGCTGCATGGGTTTCTGTCCAAGATCCTGATGTCA +
Preference number: 6 (lower is better)
Translates to: LGLNATTYMLVR*LHGFLSKILMS
Trigger: TGACATCAGGATCTTGGACAGAAACCCATGCAGTCAACGCACCAACATATAAGTTGTGGCATTTAGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp GGGTCATCTTCCACAGGTTGCAGGATGACTCTGGAGTaGTCATATGCGATAATGTTTCCGTATCGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: GSSSTGCRMTLE*SYAIMFPYRFF
Trigger: AAAGAACCGATACGGAAACATTATCGCATATGATCACTCCAGAGTCATCCTGCAACCTGTGGAAGATGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp TCTGGGTCTAAATGCCACAACTTATATGTTGGTGCGTaGACTGCATGGGTTTCTGTCCAAGATCCTGATGTC +
Preference number: 6 (lower is better)
Translates to: SGSKCHNLYVGA*TAWVSVQDPDV
Trigger: GACATCAGGATCTTGGACAGAAACCCATGCAGTCAACGCACCAACATATAAGTTGTGGCATTTAGACCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp TCTGTTGCTGCTGCTTTTGTAGCAATTCGTACACATTaGGTTTTAGTTTCCTTCTCCACACTGCTCATCGCT +
Preference number: 6 (lower is better)
Translates to: SVAAAFVAIRTH*VLVSFSTLLIA
Trigger: AGCGATGAGCAGTGTGGAGAAGGAAACTAAAACCCAATGTGTACGAATTGCTACAAAAGCAGCAGCAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CCA 72 bp AGCCCTGAGACAGGTCCACTTCATTTAGCATCACGATaGAGGTACATCCGTAATCATATACTAATCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SPETGPLHLASR*RYIRNHILISR
Trigger: TCTGGAGATTAGTATATGATTACGGATGTACCTCCATCGTGATGCTAAATGAAGTGGACCTGTCTCAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS CCA 72 bp ACATCACAGTCCATTGAACAAGACATACATTCCACTTaGATAGGACCATATCGCAGCATTCCTTCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: TSQSIEQDIHST*IGPYRSIPSSG
Trigger: GCCAGAAGAAGGAATGCTGCGATATGGTCCTATCCAAGTGGAATGTATGTCTTGTTCAATGGACTGTGATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS CAA 72 bp TTCTGTTGCTGCTGCTTTTGTAGCAATTCGTACACATaGGGTTTTAGTTTCCTTCTCCACACTGCTCATCGC +
Preference number: 6 (lower is better)
Translates to: FCCCCFCSNSYT*GFSFLLHTAHR
Trigger: GCGATGAGCAGTGTGGAGAAGGAAACTAAAACCCAATGTGTACGAATTGCTACAAAAGCAGCAGCAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 90 bp TATTCTGTATCTGGGTCTAAATGCCACAACTTATATGTTGGTGCGTaGACTGCATGGGTTTCTGTCCAAGATCCTGATGTCATTCGATAC +
Preference number: 6 (lower is better)
Translates to: YSVSGSKCHNLYVGA*TAWVSVQDPDVIRY
Trigger: GTATCGAATGACATCAGGATCTTGGACAGAAACCCATGCAGTCAACGCACCAACATATAAGTTGTGGCATTTAGACCCAGATACAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp ACTTCTTGCAATCTGAAAGAGGCAGCAAATCTTCTGTaGTTTATGTTCTTAGTCTGGGCTACGGGTATGTCT +
Preference number: 6 (lower is better)
Translates to: TSCNLKEAANLL*FMFLVWATGMS
Trigger: AGACATACCCGTAGCCCAGACTAAGAACATAAATCACAGAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 90 bp CTGAGTTACGCAGCGGTACAAATCCTGGTCAGTTTTTGTCACTTCTaGCAATCTGAAAGAGGCAGCAAATCTTCTGTGATTTATGTTCTT +
Preference number: 6 (lower is better)
Translates to: LSYAAVQILVSFCHF*QSERGSKSSVIYVL
Trigger: AAGAACATAAATCACAGAAGATTTGCTGCCTCTTTCAGATTGCAAGAAGTGACAAAAACTGACCAGGATTTGTACCGCTGCGTAACTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp AAAATGAGGAGATTTATCGCAAGGATAACTCAGGACTaGGATGTCATCAATGGCAATATAACCACTTCTCCC +
Preference number: 6 (lower is better)
Translates to: KMRRFIARITQD*DVINGNITTSP
Trigger: GGGAGAAGTGGTTATATTGCCATTGATGACATCCAAGTCCTGAGTTATCCTTGCGATAAATCTCCTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS TCA 72 bp GATGTCATCAATGGCAATATAACCACTTCTCCCTCCTaGGACTTCAGCTTCAAATATTACCTGGTATTCATT +
Preference number: 6 (lower is better)
Translates to: DVINGNITTSPS*DFSFKYYLVFI
Trigger: AATGAATACCAGGTAATATTTGAAGCTGAAGTCTCAGGAGGGAGAAGTGGTTATATTGCCATTGATGACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
CDS CAA 72 bp TGTGGTCTCGTTAGGTTGCATATTCTAAAAATTCGATaGATCACATCACAGTCCATTGAACAAGACATACAT +
Preference number: 6 (lower is better)
Translates to: CGLVRLHILKIR*ITSQSIEQDIH
Trigger: ATGTATGTCTTGTTCAATGGACTGTGATGTGATCAATCGAATTTTTAGAATATGCAACCTAACGAGACCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2
CDS TCA 72 bp TATTCTAAAAATTCGATTGATCACATCACAGTCCATTaGACAAGACATACATTCCACTTGGATAGGACCATA +
Preference number: 6 (lower is better)
Translates to: YSKNSIDHITVH*TRHTFHLDRTI
Trigger: TATGGTCCTATCCAAGTGGAATGTATGTCTTGTTCAATGGACTGTGATGTGATCAATCGAATTTTTAGAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166468.2
ENSMUST00000218276.2
ENSMUST00000218359.2
ENSMUST00000220357.2