RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028399

Ensembl transcript IDs: ENSMUST00000050757.16, ENSMUST00000098005.10, ENSMUST00000102834.8, ENSMUST00000107289.9, ENSMUST00000172811.2, ENSMUST00000173376.8, ENSMUST00000173662.2, ENSMUST00000174023.8, ENSMUST00000174180.8, ENSMUST00000174531.8, ENSMUST00000174831.8, ENSMUST00000212365.2

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCTTATGTGAGCAGCCACAGCAGCGAATTCCTTGTGCTGGCCTaGGGCCCACAGGCAAGCTCTCTCTGTCCCTATCAAGCAATCCTG +
Preference number: 1 (lower is better)
Translates to: PPYVSSHSSEFLVLA*GPQASSLCPYQAIL
Trigger: CAGGATTGCTTGATAGGGACAGAGAGAGCTTGCCTGTGGGCCTCAGGCCAGCACAAGGAATTCGCTGCTGTGGCTGCTCACATAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 90 bp CGAATCAACACGGACAAGCTCTCAGGGCCAGGGCCGACATCTGTGTaGGCAGTCACAGTGATCCGGTATTCAGTCCATTTTTCCAGCTGT +
Preference number: 1 (lower is better)
Translates to: RINTDKLSGPGPTSV*AVTVIRYSVHFSSC
Trigger: ACAGCTGGAAAAATGGACTGAATACCGGATCACTGTGACTGCCCACACAGATGTCGGCCCTGGCCCTGAGAGCTTGTCCGTGTTGATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR TCA 90 bp ACAAGCTCTCAGGGCCAGGGCCGACATCTGTGTGGGCAGTCACAGTaGTCCGGTATTCAGTCCATTTTTCCAGCTGTTCCAAAAGGTACT +
Preference number: 1 (lower is better)
Translates to: TSSQGQGRHLCGQSQ*SGIQSIFPAVPKGT
Trigger: AGTACCTTTTGGAACAGCTGGAAAAATGGACTGAATACCGGATCACTGTGACTGCCCACACAGATGTCGGCCCTGGCCCTGAGAGCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR CCA 90 bp ACACTCCAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATaGATCTGTAGCCTTCTGACCTCTGCTGGAGTATCAGGGCACCCA +
Preference number: 1 (lower is better)
Translates to: TLQACMAKPCNGWIG*ICSLLTSAGVSGHP
Trigger: TGGGTGCCCTGATACTCCAGCAGAGGTCAGAAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTGGAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 90 bp TCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTaGCCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGT +
Preference number: 1 (lower is better)
Translates to: SCHTGSFVAKRQTAH*PVILVCDIPLDPTC
Trigger: ACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 90 bp TTTGTAAAGACACTCCAAGCTTGTATGGCAAAGCCATGTAACGGATaGATAGGATGGATCTGTAGCCTTCTGACCTCTGCTGGAGTATCA +
Preference number: 1 (lower is better)
Translates to: FVKTLQACMAKPCNG*IGWICSLLTSAGVS
Trigger: TGATACTCCAGCAGAGGTCAGAAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTGGAGTGTCTTTACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 90 bp TGTTGCCAAGAGACAAACAGCTCACTGGCCAGTCATTCTGGTGTGTaGTATTCCATTAGATCCAACATGTCCAAAATGGCATGTCTAGGT +
Preference number: 1 (lower is better)
Translates to: CCQETNSSLASHSGV*YSIRSNMSKMACLG
Trigger: ACCTAGACATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCTCTTGGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 90 bp GGGGAATACGAGGCTGGAAAGTTAGGGGCGAGGCTCAATAATCAATaGTGTGCACTCCTCAATTCCCTTTACAAATTAAAGTTTCACAAT +
Preference number: 1 (lower is better)
Translates to: GEYEAGKLGARLNNQ*CALLNSLYKLKFHN
Trigger: ATTGTGAAACTTTAATTTGTAAAGGGAATTGAGGAGTGCACATCATTGATTATTGAGCCTCGCCCCTAACTTTCCAGCCTCGTATTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CGCCACGAGACTTTAACAGCTGTGGCGTTGACAGCCTCCACCTCGACTTTTCGAGGGCCGACATCTGTGTaGGCAGTCACAGTGATCCGG +
Preference number: 2 (lower is better)
Translates to: RHETLTAVALTASTSTFRGPTSV*AVTVIR
Trigger: CCGGATCACTGTGACTGCCCACACAGATGTCGGCCC...TCGAAAAGTCGAGGTGGAGGCTGTCAACGCCACAGCTGTTAAAGTCTCGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR CAA 90 bp TTATTGGGCACAGGTGAGCGCCACGAGACTTTAACAGCTGTGGCGTaGACAGCCTCCACCTCGACTTTTCGAGGAGGACCACTTGGAACA +
Preference number: 2 (lower is better)
Translates to: LLGTGERHETLTAVA*TASTSTFRGGPLGT
Trigger: TGTTCCAAGTGGTCCTCCTCGAAAAGTCGAGGTGGAGGCTGTCAACGCCACAGCTGTTAAAGTCTCGTGGCGCTCACCTGTGCCCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCCCACCTCATCCTCCTaGAGGACACGTCCCATCCAT +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLPTSSS*RTRPIH
Trigger: ATGGATGGGACGTGTCCTGCAGGAGGATGAGGTGGG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCCAGGAACGCGGCTaGCACAACATGTTTCTGACT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHSQERG*HNMFLT
Trigger: AGTCAGAAACATGTTGTGTCAGCCGCGTTCCTGGGA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACCCACCTCATCCTCCTaGAGGACACGTCCCATCCAT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEPTSSS*RTRPIH
Trigger: ATGGATGGGACGTGTCCTGCAGGAGGATGAGGTGGG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCAAGTTGCTCTTCCTaGTGTGACAATGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTPSCSS*CDNEER
Trigger: CCTTTCCTCATTGTCACATCAGGAAGAGCAACTTGG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGACAAACAGCTCACTaGCCAGTCATTCTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLRQTAH*PVILVC
Trigger: ACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAAACAAAATTCCCCTTaGAGCTTGCAGAGAATGGGC +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHKQNSP*SLQRMG
Trigger: GCCCATTCTCTGCAAGCTTCAAGGGGAATTTTGTTT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCTGAAAAGAGTAACATaGGTTTGGCTTTGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLKRVT*VWLCPC
Trigger: ACAGGGGCAAAGCCAAACTCATGTTACTCTTTTCAG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGGAAAGGAGAGGCCCTaGTTATCCAAGTGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHGKERP*LSKCFG
Trigger: CCCAAAGCACTTGGATAATCAGGGCCTCTCCTTTCC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCATGTGGCAAATTCATaGCATCATCCATGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHHVANS*HHPWLP
Trigger: AGGAAGCCATGGATGATGGCATGAATTTGCCACATG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAAATGTAAGTATGAGTaGCACGGGGAAAGGGTGATG +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHKCKYE*HGERVM
Trigger: CATCACCCTTTCCCCGTGCCACTCATACTTACATTT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTACAGGTACTGTAGACTaGGCATTGCACAAAAATGTG +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTTGTVD*ALHKNV
Trigger: CACATTTTTGTGCAATGCTCAGTCTACAGTACCTGT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCATTCTATCTGGTTCTaGTGTAGGTTAGAGAGTCTC +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHHSIWF*CRLESL
Trigger: GAGACTCTCTAACCTACATCAGAACCAGATAGAATG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTACAGGCAGTTTTGTTaGCAAGAGACAAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLYRQFC*QETNSS
Trigger: TGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATTATCCAAGTGCTTTaGGCTGGTACAGTCACTAAC +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTIIQVL*AGTVTN
Trigger: GTTAGTGACTGTACCAGCCCAAAGCACTTGGATAAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACATCCATGGCTTCCTGTaGAAATGTTTGGGGAGATAT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHIHGFL*KCLGRY
Trigger: ATATCTCCCCAAACATTTCCACAGGAAGCCATGGAT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTTTGCGCCTCCCTGTTaGTTCCAAAAAGAAAACAAA +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLFAPPC*FQKENK
Trigger: TTTGTTTTCTTTTTGGAATCAACAGGGAGGCGCAAA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCCAAGTTGCTCTTCCTaGTGTGACAATGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHPSCSS*CDNEER
Trigger: CCTTTCCTCATTGTCACATCAGGAAGAGCAACTTGG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCTCAGATATGATAGTTaGAAGTGTTTGGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLRYDS*KCLVSR
Trigger: CCTAGAGACCAAACACTTGCAACTATCATATCTGAG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAATAGACTCACACAGTaGACATTCTATCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHNRLTQ*TFYLVL
Trigger: CAGAACCAGATAGAATGTGCACTGTGTGAGTCTATT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAATAGACTCACACAGTaGACATTCTATCTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTNRLTQ*TFYLVL
Trigger: CAGAACCAGATAGAATGTGCACTGTGTGAGTCTATT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATTTGTGGATATGGTTaGATAGATGGGGGAATACGA +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTICGYG*IDGGIR
Trigger: TCGTATTCCCCCATCTATCCAACCATATCCACAAAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCAGTATTTGTGGATATaGTTGGATAGATGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHQYLWI*LDRWGN
Trigger: ATTCCCCCATCTATCCAACCATATCCACAAATACTG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAGACAAACAGCTCACTaGCCAGTCATTCTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCERQTAH*PVILVC
Trigger: ACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCACCCATATACCCAATaGAAATCAAAAGCAAAGGAG +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLHPYTQ*KSKAKE
Trigger: CTCCTTTGCTTTTGATTTCCATTGGGTATATGGGTG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTGAAAAGAGTAACATaGGTTTGGCTTTGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLKRVT*VWLCPC
Trigger: ACAGGGGCAAAGCCAAACTCATGTTACTCTTTTCAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCATCCCCCACTTGGCTaGAAACTAGGAATGCATATT +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHHPPLG*KLGMHI
Trigger: AATATGCATTCCTAGTTTTCAGCCAAGTGGGGGATG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACATAGAATTCTTCAGATaGCTCCTAAGTCAGGATTCT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHIEFFR*LLSQDS
Trigger: AGAATCCTGACTTAGGAGGCATCTGAAGAATTCTAT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAGCAGCTTTTTACTTTaGGCCTCCCTGTTGATTCCA +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESSFLL*ASLLIP
Trigger: TGGAATCAACAGGGAGGCGCAAAGTAAAAAGCTGCT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCTGACCTTTCCCACATaGACACCTTTTAGATATTTA +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLTFPT*TPFRYL
Trigger: TAAATATCTAAAAGGTGTGCATGTGGGAAAGGTCAG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACATGTGGCAAATTCATaGCATCATCCATGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEHVANS*HHPWLP
Trigger: AGGAAGCCATGGATGATGGCATGAATTTGCCACATG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGAAGCTTGCAGAGAATaGGCACTTTCTCATCGGTTA +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHEACRE*ALSHRL
Trigger: TAACCGATGAGAAAGTGCCCATTCTCTGCAAGCTTC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATATGGTTGGATAGATaGGGGAATACGAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEIWLDR*GNTRLE
Trigger: TTCCAGCCTCGTATTCCCCCATCTATCCAACCATAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATACAGGTACTGTAGACTaGGCATTGCACAAAAATGTG +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHTGTVD*ALHKNV
Trigger: CACATTTTTGTGCAATGCTCAGTCTACAGTACCTGT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGATTTGGAAGGGATCTaGAGTAAACCAAGTTGCTCT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEDLEGI*SKPSCS
Trigger: AGAGCAACTTGGTTTACTTCAGATCCCTTCCAAATC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAGTGATGGGAAGATGTaGAACCAAATACCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESDGKM*NQIPFH
Trigger: ATGGAAGGGTATTTGGTTTCACATCTTCCCATCACT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAATTCTTGGTCCACTTaGAAGAGTTTGGTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHNSWST*KSLVLF
Trigger: AAACAAAACCAAACTCTTCCAAGTGGACCAAGAATT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAATTCTTGGTCCACTTaGAAGAGTTTGGTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: QACMAKPCNGWIGWICSLNSWST*KSLVLF
Trigger: AAACAAAACCAAACTCTTCCAAGTGGACCAAGAATT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATTATCCAAGTGCTTTaGGCTGGTACAGTCACTAAC +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEIIQVL*AGTVTN
Trigger: GTTAGTGACTGTACCAGCCCAAAGCACTTGGATAAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGTTACTGCCCACTCTaGAGCAGATTTGGAAGGGAT +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGYCPL*SRFGRD
Trigger: ATCCCTTCCAAATCTGCTCCAGAGTGGGCAGTAACC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATCCATGGCTTCCTGTaGAAATGTTTGGGGAGATAT +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHIHGFL*KCLGRY
Trigger: ATATCTCCCCAAACATTTCCACAGGAAGCCATGGAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATCATGCCATCATCCATaGCTTCCTGTGGAAATGTTT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESCHHP*LPVEMF
Trigger: AAACATTTCCACAGGAAGCCATGGATGATGGCATGA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAAATCATATAGCATGTaGCAAATTCATGCCATCATC +
Preference number: 2 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTKSYSM*QIHAII
Trigger: GATGATGGCATGAATTTGCCACATGCTATATGATTT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAAGATGGTGGTTCTTTaGTGTCATTTCTTCTTCCCT +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEKMVVL*CHFFFP
Trigger: AGGGAAGAAGAAATGACAGCAAAGAACCACCATCTT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTCAGATATGATAGTTaGAAGTGTTTGGTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLRYDS*KCLVSR
Trigger: CCTAGAGACCAAACACTTGCAACTATCATATCTGAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAAATGTAAGTATGAGTaGCACGGGGAAAGGGTGATG +
Preference number: 2 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYKCKYE*HGERVM
Trigger: CATCACCCTTTCCCCGTGCCACTCATACTTACATTT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCAGTATTTGTGGATATaGTTGGATAGATGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHQYLWI*LDRWGN
Trigger: ATTCCCCCATCTATCCAACCATATCCACAAATACTG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAACAAAATTCCCCTTaGAGCTTGCAGAGAATGGGC +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTKQNSP*SLQRMG
Trigger: GCCCATTCTCTGCAAGCTTCAAGGGGAATTTTGTTT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATAGAATTCTTCAGATaGCTCCTAAGTCAGGATTCT +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHIEFFR*LLSQDS
Trigger: AGAATCCTGACTTAGGAGGCATCTGAAGAATTCTAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR GCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAGCAGCTTTTTACTTTaGGCCTCCCTGTTGATTCCA +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTSSFLL*ASLLIP
Trigger: TGGAATCAACAGGGAGGCGCAAAGTAAAAAGCTGCT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CAA 90 bp ACTTCTGAAGCAGTTCCTTACAGATGGGTTCAAGTAATAACATTATaGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGA +
Preference number: 2 (lower is better)
Translates to: TSEAVPYRWVQVITL*GVESIEQCIVQRCR
Trigger: TCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACCCATCTGTAAGGAACTGCTTCAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAGTGATGGGAAGATGTaGAACCAAATACCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTSDGKM*NQIPFH
Trigger: ATGGAAGGGTATTTGGTTTCACATCTTCCCATCACT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACCAAAACCTAAACCATaGAAGAACCGAATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTPKPKP*KNRMAV
Trigger: AACTGCCATTCGGTTCTTCCATGGTTTAGGTTTTGG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATACAAAACAGTATTTGTaGATATGGTTGGATAGATGG +
Preference number: 2 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHTKQYL*IWLDRW
Trigger: CCATCTATCCAACCATATCCACAAATACTGTTTTGT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATACTGATGTTTGCCTaGGAAATTAAACTTGAATGG +
Preference number: 2 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEILMFA*EIKLEW
Trigger: CCATTCAAGTTTAATTTCCCAGGCAAACATCAGTAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAGTCATTCTGGTGTGTaGTATTCCATTAGATCCAAC +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTSHSGV*YSIRSN
Trigger: GTTGGATCTAATGGAATATCACACACCAGAATGACT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGTAATGGTAGATACTaGTGTTTGCCTGGGAAATTA +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGNGRY*CLPGKL
Trigger: TAATTTCCCAGGCAAACATCAGTATCTACCATTACC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAATTTGTGGATATGGTTaGATAGATGGGGGAATACGA +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTICGYG*IDGGIR
Trigger: TCGTATTCCCCCATCTATCCAACCATATCCACAAAT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAATCATATAGCATGTaGCAAATTCATGCCATCATC +
Preference number: 2 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTKSYSM*QIHAII
Trigger: GATGATGGCATGAATTTGCCACATGCTATATGATTT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 72 bp CAGGGCCAGGGCCGACATCTGTGTGGGCAGTCACAGTaGTCCGGTATTCAGTCCATTTTTCCAGCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: QGQGRHLCGQSQ*SGIQSIFPAVP
Trigger: TGGAACAGCTGGAAAAATGGACTGAATACCGGATCACTGTGACTGCCCACACAGATGTCGGCCCTGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR CCA 72 bp ACGGACAAGCTCTCAGGGCCAGGGCCGACATCTGTGTaGGCAGTCACAGTGATCCGGTATTCAGTCCATTTT +
Preference number: 3 (lower is better)
Translates to: TDKLSGPGPTSV*AVTVIRYSVHF
Trigger: AAAATGGACTGAATACCGGATCACTGTGACTGCCCACACAGATGTCGGCCCTGGCCCTGAGAGCTTGTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTACAGCAGCGAATTCCTaGTGCTGGCCTGAGGCCCAC +
Preference number: 3 (lower is better)
Translates to: QACMAKPCNGWIGWICSLTAANS*CWPEAH
Trigger: GTGGGCCTCAGGCCAGCACAAGGAATTCGCTGCTGT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 72 bp ATGAGGAAAGGAGAGGCCCTGATTATCCAAGTGCTTTaGGCTGGTACAGTCACTAACATCCCCCACTTGGCT +
Preference number: 3 (lower is better)
Translates to: MRKGEALIIQVL*AGTVTNIPHLA
Trigger: AGCCAAGTGGGGGATGTTAGTGACTGTACCAGCCCAAAGCACTTGGATAATCAGGGCCTCTCCTTTCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 72 bp ATTATAAGGCACTCTAAATGCAGAACTAAAACCGAATaGAACAGCACAGCGCCTCCCAGGAACGCGGCTGAC +
Preference number: 3 (lower is better)
Translates to: IIRHSKCRTKTE*NSTAPPRNAAD
Trigger: GTCAGCCGCGTTCCTGGGAGGCGCTGTGCTGTTTCATTCGGTTTTAGTTCTGCATTTAGAGTGCCTTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 72 bp GCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATaGATCTGTAGCCTTCTGACCTCTGCTGGAGTATCA +
Preference number: 3 (lower is better)
Translates to: ACMAKPCNGWIG*ICSLLTSAGVS
Trigger: TGATACTCCAGCAGAGGTCAGAAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 72 bp ACACTCCAAGCTTGTATGGCAAAGCCATGTAACGGATaGATAGGATGGATCTGTAGCCTTCTGACCTCTGCT +
Preference number: 3 (lower is better)
Translates to: TLQACMAKPCNG*IGWICSLLTSA
Trigger: AGCAGAGGTCAGAAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTGGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCAGCAGCTTTTTACTTaGCGCCTCCCTGTTGATTCC +
Preference number: 3 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHQQLFT*RLPVDS
Trigger: GGAATCAACAGGGAGGCGCAAAGTAAAAAGCTGCTG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTGGCTGTCCTTGCCTaGTCTAACCATGCAAACCAT +
Preference number: 3 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLAVLA*SNHANH
Trigger: ATGGTTTGCATGGTTAGACAAGGCAAGGACAGCCAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTCCCCTGGCTGTCCTaGCCTTGTCTAACCATGCAA +
Preference number: 3 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELPWLS*PCLTMQ
Trigger: TTGCATGGTTAGACAAGGCAAGGACAGCCAGGGGAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR GCA 72 bp CCCGAAGTTGTTTCTATAAGTAAGACTGGTGGTTACTaGCCACTCTGGAGCAGATTTGGAAGGGATCTGAAG +
Preference number: 3 (lower is better)
Translates to: PEVVSISKTGGY*PLWSRFGRDLK
Trigger: CTTCAGATCCCTTCCAAATCTGCTCCAGAGTGGGCAGTAACCACCAGTCTTACTTATAGAAACAACTTCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACAGCAGCTTTTTACTTaGCGCCTCCCTGTTGATTCC +
Preference number: 3 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEQQLFT*RLPVDS
Trigger: GGAATCAACAGGGAGGCGCAAAGTAAAAAGCTGCTG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 72 bp GAGACAAACAGCTCACTGGCCAGTCATTCTGGTGTGTaGTATTCCATTAGATCCAACATGTCCAAAATGGCA +
Preference number: 3 (lower is better)
Translates to: ETNSSLASHSGV*YSIRSNMSKMA
Trigger: TGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CCA 72 bp ACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTaGCCAGTCATTCTGGTGTGTGATATTCCATTAGAT +
Preference number: 3 (lower is better)
Translates to: TGSFVAKRQTAH*PVILVCDIPLD
Trigger: ATCTAATGGAATATCACACACCAGAATGACTGGCCAGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp CGCCATTTTCCATTTTCACATAGTGCACCTGATATCCTCTTATCTGGCCATGCTTGTTCCAAAAGGTACTaGGTAGTATCCGAAGGAATT +
Preference number: 3 (lower is better)
Translates to: RHFPFSHSAPDILLSGHACSKRY*VVSEGI
Trigger: AATTCCTTCGGATACTACCAAGTACCTTTTGGAACA...AGCATGGCCAGATAAGAGGATATCAGGTGCACTATGTGAAAATGGAAAATGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
3UTR-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGAATTCTTGGTCCACTaGGAAGAGTTTGGTTTTGTT +
Preference number: 3 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHEFLVH*EEFGFV
Trigger: AACAAAACCAAACTCTTCCAAGTGGACCAAGAATTC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTTAAACTGTGAATTCTaGGTCCACTTGGAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLNCEF*VHLEEF
Trigger: AAACTCTTCCAAGTGGACCAAGAATTCACAGTTTAA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGATAGTTGCAAGTGTTaGGTCTCTAGGATTTTATTC +
Preference number: 3 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEDSCKC*VSRILF
Trigger: GAATAAAATCCTAGAGACCAAACACTTGCAACTATC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGATAGTTGCAAGTGTTaGGTCTCTAGGATTTTATTC +
Preference number: 3 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHDSCKC*VSRILF
Trigger: GAATAAAATCCTAGAGACCAAACACTTGCAACTATC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 72 bp GATGTGTTGTTATCCACAGACACAGAAATGAACTTCTaGAGCAGTTCCTTACAGATGGGTTCAAGTAATAAC +
Preference number: 3 (lower is better)
Translates to: DVLLSTDTEMNF*SSSLQMGSSNN
Trigger: GTTATTACTTGAACCCATCTGTAAGGAACTGCTTCAGAAGTTCATTTCTGTGTCTGTGGATAACAACACATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR GCA 72 bp GTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTaGATAGTACAAAGGTGTAGAAAGTGCGAAGTTCCC +
Preference number: 3 (lower is better)
Translates to: VITLLGVESIEQ*IVQRCRKCEVP
Trigger: GGGAACTTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGAATTCTTGGTCCACTaGGAAGAGTTTGGTTTTGTT +
Preference number: 3 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYEFLVH*EEFGFV
Trigger: AACAAAACCAAACTCTTCCAAGTGGACCAAGAATTC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR TCA 72 bp CGGTTATACAAAACAAAACATGTGAGTAATAGCTGTTaGGACAGGTACTGTAGACTGAGCATTGCACAAAAA +
Preference number: 3 (lower is better)
Translates to: RLYKTKHVSNSC*DRYCRLSIAQK
Trigger: TTTTTGTGCAATGCTCAGTCTACAGTACCTGTCTCAACAGCTATTACTCACATGTTTTGTTTTGTATAACCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATTAAACTGTGAATTCTaGGTCCACTTGGAAGAGTTT +
Preference number: 3 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTLNCEF*VHLEEF
Trigger: AAACTCTTCCAAGTGGACCAAGAATTCACAGTTTAA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CAA 72 bp ACAGGTGAGCGCCACGAGACTTTAACAGCTGTGGCGTaGACAGCCTCCACCTCGACTTTTCGAGGAGGACCA +
Preference number: 4 (lower is better)
Translates to: TGERHETLTAVA*TASTSTFRGGP
Trigger: TGGTCCTCCTCGAAAAGTCGAGGTGGAGGCTGTCAACGCCACAGCTGTTAAAGTCTCGTGGCGCTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp CCACGAGACTTTAACAGCTGTGGCGTTGACAGCCTCCACCTCGACTTTTCGAGGGCTGGCAATGGTATCTaGTCGTGGCGGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRDFNSCGVDSLHLDFSRAGNGI*SWRCPR
Trigger: TCTTGGACACCGCCACGATCAGATACCATTGCCAGC...CCTCGAAAAGTCGAGGTGGAGGCTGTCAACGCCACAGCTGTTAAAGTCTCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCGCAGAGGAAGAAGGTaGGGAGCAGCGACAGCGGCC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTRRGRR*GAATAA
Trigger: GGCCGCTGTCGCTGCTCCTCACCTTCTTCCTCTGCG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCTCCACCTCGACTTTTCGAGGAGGACCACTTGGAACATCTTCATCGGTTCGAATGCCTGGCTCAATGGTaGTTCGCTGCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPPRLFEEDHLEHLHRFECLAQW*FAALLL
Trigger: AAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCA...TTCGAACCGATGAAGATGTTCCAAGTGGTCCTCCTCGAAAAGTCGAGGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp TTCGAATCAACACGGACAAGCTCTCAGGGCCAGGGCCGACATCTGTGTGGGCAGTTGCATGGTTCTAGCTaGTATTTCAGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: FESTRTSSQGQGRHLCGQLHGSS*YFSCRS
Trigger: GCTTCTACAGCTGAAATATCAGCTAGAACCATGCAA...CTGCCCACACAGATGTCGGCCCTGGCCCTGAGAGCTTGTCCGTGTTGATTCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp GCCATTTTCCATTTTCACATAGTGCACCTGATATCCTCTTATCTGGCCATGCTGGAAGCACCCAGGCCTTaGGGAGAGCGTGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: AIFHFHIVHLISSYLAMLEAPRP*GERADR
Trigger: TCTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTC...CAGCATGGCCAGATAAGAGGATATCAGGTGCACTATGTGAAAATGGAAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTGCTCTGGAACACCATaGTCAGGCCAGGCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLCSGTP*SGQAVN
Trigger: GTTCACCGCCTGGCCTGATCATGGTGTTCCAGAGCA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCTCTGGAACACCATaGTCAGGCCAGGCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHCSGTP*SGQAVN
Trigger: GTTCACCGCCTGGCCTGATCATGGTGTTCCAGAGCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCTTCAGCATGGGCTaGCCCTTCGGCTCGCCATTT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHSFSMG*PFGSPF
Trigger: AAATGGCGAGCCGAAGGGTCAGCCCATGCTGAAGGA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACATGGCCCGGGCCCTTTaGTCGTGTGAGCACGTACTT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHMARAL*SCEHVL
Trigger: AAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCAT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCATCCCGTGGGGCACTaGATGGTGCTTGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLHPVGH*MVLVLR
Trigger: CCTCAGAACAAGCACCATCCAGTGCCCCACGGGATG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCCTGAACATCCCGTaGGGCACTGGATGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHCLNIP*GTGWCL
Trigger: CAAGCACCATCCAGTGCCCCACGGGATGTTCAGGCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGAACTGCCCCAGTGGTaGACACTAGCTTGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLELPQW*TLAWAC
Trigger: GCAAGCCCAAGCTAGTGTCCACCACTGGGGCAGTTC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCACATAAGGCATTGGTaGCCCCACTGCCACACAGGT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLHIRHW*PHCHTG
Trigger: ACCTGTGTGGCAGTGGGGTCACCAATGCCTTATGTG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCTGGCAATGGTATCTaGTCGTGGCGGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHAGNGI*SWRCPR
Trigger: TCTTGGACACCGCCACGATCAGATACCATTGCCAGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGTCATCCCCCAGGGTaGACTCAGTGGGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTCHPPG*TQWEGH
Trigger: ATGTCCTTCCCACTGAGTTCACCCTGGGGGATGACA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGTGCATCAGCCAGCATaGCATCCTTCAGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLVHQPA*HPSAWA
Trigger: AGCCCATGCTGAAGGATGTCATGCTGGCTGATGCAC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGGGCAGAGTAGCGAGTaGCCGCGCTGTTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHGQSSE*PRCWWQ
Trigger: TTGCCACCAACAGCGCGGGCACTCGCTACTCTGCCC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCCCGTGAGTTTCTGTaGCTCTGCTGGGCCAATACT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTAREFL*LCWANT
Trigger: AGTATTGGCCCAGCAGAGGCACAGAAACTCACGGGC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGCCCGTGAGTTTCTGTaGCTCTGCTGGGCCAATACT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLAREFL*LCWANT
Trigger: AGTATTGGCCCAGCAGAGGCACAGAAACTCACGGGC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGAGTGCCCGCGCTGTTaGTGGCAACACACTCGTATT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTECPRC*WQHTRI
Trigger: AATACGAGTGTGTTGCCACCAACAGCGCGGGCACTC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACACTGGGTCGGTTGGGTaGTGTGAAGGGACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHTGSVG*CEGTSL
Trigger: TAAGGAGGTCCCTTCACACCACCCAACCGACCCAGT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCTGCTGGGCCAATACTaGTCACACTTCACCCTCGAC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLLGQY*SHFTLD
Trigger: GTCGAGGGTGAAGTGTGACCAGTATTGGCCCAGCAG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGCCAGGCGGTGAACTaGAATTGTCTCACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTGQAVN*NCLTSL
Trigger: GAGGGAAGTGAGACAATTCCAGTTCACCGCCTGGCC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAGGTGTGGGGTGCTCTaGAACACCATGATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHRCGVL*NTMIRP
Trigger: TGGCCTGATCATGGTGTTCCAGAGCACCCCACACCT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGACACTTGGACTATATaGCCCGGGCCCTTTGCTCGT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTDTWTI*PGPFAR
Trigger: ACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGTTTGTCTTCCCAATaGAGGCAGGCTTGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLSLSSQ*RQAWCG
Trigger: TCCGCACCAAGCCTGCCTTCATTGGGAAGACAAACT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAACCTGGACCAGCCCGTaGGTTTCTGTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCETWTSP*VSVPLL
Trigger: CAGCAGAGGCACAGAAACTCACGGGCTGGTCCAGGT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGATCAGGCCAGGCGGTaGACTGGAATTGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTDQARR*TGIVSL
Trigger: AAGTGAGACAATTCCAGTTCACCGCCTGGCCTGATC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCGAGCTCCATTCCGGTaGCATTCTCCCCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTRAPFR*HSPLFL
Trigger: TAGAAACAGGGGAGAATGTCACCGGAATGGAGCTCG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCTGTCACCCTATGCTaGAATCCACCAGCACTGTTC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTAVTLC*NPPALF
Trigger: GAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLVSCSF*TPTLPS
Trigger: AGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTAC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHVSCSF*TPTLPS
Trigger: AGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTAC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCAGTGTACCACCATTaGCCCTGCATCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHAVYHH*PCIWRI
Trigger: AATCCTCCAGATGCAGGGCCAATGGTGGTACACTGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCTCCAGAGTAGTGAGTaGCTCCATGTCTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLQSSE*LHVFPA
Trigger: GGCAGGAAAGACATGGAGCCACTCACTACTCTGGAG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCACTGCCACACAGGTaGTATTTACACTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTPLPHR*YLHFHL
Trigger: CAGGTGGAAGTGTAAATATCACCTGTGTGGCAGTGG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGTTTCATCCAGTTGTTaGCATGCTGAGTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLVSSSC*HAEWGP
Trigger: TGGACCCCACTCAGCATGTCAACAACTGGATGAAAC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGATCCAGATCCATTaGCACAACAGGGTCGGAGTA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHWIQIH*HNRVGV
Trigger: TACTCCGACCCTGTTGTGTCAATGGATCTGGATCCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCCATACCTGGTGTTTaGAAGTTAAGGCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHAIPGV*KLRRLS
Trigger: ACTGAGGCGCCTTAACTTTCAAACACCAGGTATGGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGTGGGCAGTCACAGTaGTCCGGTATTCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHCGQSQ*SGIQSI
Trigger: AATGGACTGAATACCGGATCACTGTGACTGCCCACA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGTTGCCACGATAACTaGACAGAGGTTGAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTGCHDN*TEVEVV
Trigger: CACCACTTCAACCTCTGTTCAGTTATCGTGGCAACC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGCCCTTTGCTCGTGTaGGCACGTACTTTTACATCA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGPLLV*ARTFTS
Trigger: TGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACACAGCATGGTGGCGGTaGGGGTCCGTTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYTAWWR*GSVPPP
Trigger: AGGTGGTGGAACGGACCCGCACCGCCACCATGCTGT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGTGTCAGATCTTCTaGCCCCAACATCCACTTCAC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHWCQIF*PQHPLH
Trigger: GTGAAGTGGATGTTGGGGGCAGAAGATCTGACACCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTTTGCTGTCACCCTATaGTGCAATCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLFAVTL*CNPPAL
Trigger: CAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTTCCAACGCCGGCACTaGAATGCACGGAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHFQRRH*NARKWA
Trigger: GGCCCATTTCCGTGCATTGCAGTGCCGGCGTTGGAA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGATCCGGATTACCGCTaGCTGCACACAGCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHDPDYR*LHTAWW
Trigger: CCACCATGCTGTGTGCAGCCAGCGGTAATCCGGATC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGCCTGAACATCCCGTaGGGCACTGGATGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCECLNIP*GTGWCL
Trigger: CAAGCACCATCCAGTGCCCCACGGGATGTTCAGGCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCTTCAGCATGGGCTGACCCTTCGGCTCGCCATTTTCCATTTTCACATAGTGCAAGACTAGTTCATAGCTaGCAATGGTATCTGATCGTG +
Preference number: 4 (lower is better)
Translates to: PSAWADPSARHFPFSHSARLVHS*QWYLIV
Trigger: CACGATCAGATACCATTGCCAGCTATGAACTAGTCT...TGCACTATGTGAAAATGGAAAATGGCGAGCCGAAGGGTCAGCCCATGCTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCACATAAGGCATTGGTaGCCCCACTGCCACACAGGT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHHIRHW*PHCHTG
Trigger: ACCTGTGTGGCAGTGGGGTCACCAATGCCTTATGTG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGAAGCACCCAGGCCTTaGGGAGAGCGTGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYEAPRP*GERADR
Trigger: TCTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGAACATCAGGCAGTTaGACAGTAATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTGTSGS*TVIMPS
Trigger: GGATGGCATGATTACTGTGCAACTGCCTGATGTTCC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGATGATAAACACCACTaGAAGGACAGGACCTACGAC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLDDKHH*KDRTYD
Trigger: GTCGTAGGTCCTGTCCTTGCAGTGGTGTTTATCATC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAACTCCTCGGATAGGCTaGAGGCACACCCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCETPRIG*RHTLVD
Trigger: ATCCACAAGGGTGTGCCTGCAGCCTATCCGAGGAGT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATACTCCTCGGATAGGCTaGAGGCACACCCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHTPRIG*RHTLVD
Trigger: ATCCACAAGGGTGTGCCTGCAGCCTATCCGAGGAGT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGTGACATTTCTCTCTaGCCATTTCTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGDISL*PFLSAW
Trigger: CCAAGCTGAGAGAAATGGGCAGAGAGAAATGTCACC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATGGCTGCACACAGCATaGTGGCGGTGCGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTWLHTA*WRCGSV
Trigger: AACGGACCCGCACCGCCACCATGCTGTGTGCAGCCA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAAACCAAGTGATTTCTaGATCCGGATTACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLKPSDF*IRITAG
Trigger: GCCAGCGGTAATCCGGATCCAGAAATCACTTGGTTT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGGATCTGTCCATTTaGCTCCTCAGGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLDLSI*LLRFLP
Trigger: TGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTTAACAATCAGCTTCTaGGTAGCTCGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLTISF*VARPST
Trigger: AGTGGATGGCCGAGCTACCCAGAAGCTGATTGTTAA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAACAGGGTCGGAGTATaGGCTGGTTGCATACATCTT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHNRVGV*AGCIHL
Trigger: AAGATGTATGCAACCAGCCCATACTCCGACCCTGTT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCTCTTCGTCTGTGATTaGCTGTGGATCCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLFVCD*LWIQIH
Trigger: ATGGATCTGGATCCACAGCCAATCACAGACGAAGAG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTGCTGGGCCAATACTaGTCACACTTCACCCTCGAC +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELLGQY*SHFTLD
Trigger: GTCGAGGGTGAAGTGTGACCAGTATTGGCCCAGCAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAGGTGTGGGGTGCTCTaGAACACCATGATCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCERCGVL*NTMIRP
Trigger: TGGCCTGATCATGGTGTTCCAGAGCACCCCACACCT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CAA 72 bp CTGATTACTGTCATTGTTCCTGCCATACAGGCAGTTTaGTTGCCAAGAGACAAACAGCTCACTGGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LITVIVPAIQAV*LPRDKQLTGQS
Trigger: TGACTGGCCAGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACAGTAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGCTTGACAAATGAATaGTGCAACTCCTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLSLTNE*CNSSRD
Trigger: GTCTCTGGAGGAGTTGCATCATTCATTTGTCAAGCT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGGTCTCCTGTAGCTTaGCAAATGAATGATGCAACT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGSPVA*QMNDAT
Trigger: AGTTGCATCATTCATTTGTCAAGCTACAGGAGACCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGTCTTGTGGACACACTaGTTTCTCCCACATTATTCG +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHVLWTH*FLPHYS
Trigger: CGAATAATGTGGGAGAAATCAGTGTGTCCACAAGAC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCTGGTACTCCTGTCTaGGTGATGACTTGTATATCA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTPGTPV*VMTCIS
Trigger: TGATATACAAGTCATCACTCAGACAGGAGTACCAGG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGCCTGGCTCAATGGTaGTTCGCTGCTCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCECLAQW*FAALLL
Trigger: AAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCCAAGACAGCAGCACTaGAGTCTTCATAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLPRQQH*SLHNCF
Trigger: AAAGCAGTTATGAAGACTTCAGTGCTGCTGTCTTGG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTAGCTTTGTCATCATaGCAACTGTGGCACTTCGTT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLALSS*QLWHFV
Trigger: AACGAAGTGCCACAGTTGTCATGATGACAAAGCTAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAACCTGGACCAGCCCGTaGGTTTCTGTGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTTWTSP*VSVPLL
Trigger: CAGCAGAGGCACAGAAACTCACGGGCTGGTCCAGGT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGATCAGGCCAGGCGGTaGACTGGAATTGTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEDQARR*TGIVSL
Trigger: AAGTGAGACAATTCCAGTTCACCGCCTGGCCTGATC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGAGGATTGCAGGTTTTaGCTCTCCGTAAGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHEDCRF*LSVRKL
Trigger: TAGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGCATCTATTACAATaGAGCAGCCAGTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHWHLLQ*SSQFCQ
Trigger: TTGGCAGAACTGGCTGCTTCATTGTAATAGATGCCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATGAATCTTGAGGTGTaGGCTTTTGAGCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTMNLEV*AFELAR
Trigger: TCTAGCCAGCTCAAAAGCTCACACCTCAAGATTCAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTATTCCCAAAATCTCATaGGGCTTGAAGTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLIPKIS*GLKSSP
Trigger: TGGGGAAGACTTCAAGCCTCATGAGATTTTGGGAAT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTTATTGGGCACAGGTaGGCGCCACGAGACTTTAAC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLIGHR*APRDFN
Trigger: GTTAAAGTCTCGTGGCGCTCACCTGTGCCCAATAAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACCACAGGCAGTGTCCTaGACTGGACACTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEPQAVS*TGHLDY
Trigger: ATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGTGTTCCCAAAGCATaGGCCAAAAGTCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTCVPKA*AKSLQL
Trigger: CAACTGAAGACTTTTGGCGCATGCTTTGGGAACACA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACATCAAATTCCCACTGTaGATCAGCCAGCATGACATC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHIKFPL*ISQHDI
Trigger: GATGTCATGCTGGCTGATGCACAGTGGGAATTTGAT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCTTTGACAGTGATCTaGGCTATTGCTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHALTVI*AIASMT
Trigger: GGTCATTGAAGCAATAGCCCAGATCACTGTCAAAGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCACTGTAGCGTGTGGTaGCTATCCCATCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLHCSVW*LSHQFL
Trigger: AAGAAATTGATGGGATAGCCACCACACGCTACAGTG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCAACACTGTAGCGTGTaGTGGCTATCCCATCAATTT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLQHCSV*WLSHQF
Trigger: AAATTGATGGGATAGCCACCACACGCTACAGTGTTG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCAACACTGTAGCGTGTaGTGGCTATCCCATCAATTT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHQHCSV*WLSHQF
Trigger: AAATTGATGGGATAGCCACCACACGCTACAGTGTTG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCATCACAACGATGGTaGAATTGTGTTCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTASQRW*NCVPKA
Trigger: TGCTTTGGGAACACAATTCCACCATCGTTGTGATGC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCATCACAACGATGGTaGAATTGTGTTCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHASQRW*NCVPKA
Trigger: TGCTTTGGGAACACAATTCCACCATCGTTGTGATGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATAGGTATTGGAGGATaGCTAGCCATACCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTIGIGG*LAIPGV
Trigger: AACACCAGGTATGGCTAGCCATCCTCCAATACCTAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGGCCGACATCTGTGTaGGCAGTCACAGTGATCCGG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGPTSV*AVTVIR
Trigger: CCGGATCACTGTGACTGCCCACACAGATGTCGGCCC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGGTGGACACTAGCTTaGGCTTGCTTCGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEWWTLA*ACFEHH
Trigger: ATGGTGCTCGAAGCAAGCCCAAGCTAGTGTCCACCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCAGAGACCCCTGTCTaGTCAACCGGAGTTCGTGTA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPETPV*STGVRV
Trigger: TACACGAACTCCGGTTGATCAGACAGGGGTCTCTGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTGTATTCTGAGTACTaGTCCAGATCCATCGTCAAA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLYSEY*SRSIVK
Trigger: TTTGACGATGGATCTGGATCAGTACTCAGAATACAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTTAAGGGCTGTATTCTaGGTACTGATCCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLRAVF*VLIQIH
Trigger: ATGGATCTGGATCAGTACTCAGAATACAGCCCTTAA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGCTGGCAATGGTATCTaGTCGTGGCGGTGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYAGNGI*SWRCPR
Trigger: TCTTGGACACCGCCACGATCAGATACCATTGCCAGC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGCATGGTTCTAGCTaGTATTTCAGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLHGSS*YFSCRS
Trigger: GCTTCTACAGCTGAAATATCAGCTAGAACCATGCAA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGAAGGACATCAAAGTaGGCAGCAATATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGRTSK*AAIYGF
Trigger: AAAGCCATATATTGCTGCTCACTTTGATGTCCTTCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTGGATCCAGATCCATTaGCACAACAGGGTCGGAGTA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHWIQIH*HNRVGV
Trigger: TACTCCGACCCTGTTGTGTCAATGGATCTGGATCCA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTTCCTCTTCGTCTGTaGTTGGCTGTGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLPLRL*LAVDPD
Trigger: ATCTGGATCCACAGCCAATCACAGACGAAGAGGAAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTCTGAGTGGAGATTTTaGGGGAATCCAGTTGGTATT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTSEWRF*GNPVGI
Trigger: AATACCAACTGGATTCCCTCAAAATCTCCACTCAGA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATCTGGGGCAGTCTTTaGTGTCACCCTATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHIWGSL*CHPMLQ
Trigger: TTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATTCCAACGCCGGCACTaGAATGCACGGAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTFQRRH*NARKWA
Trigger: GGCCCATTTCCGTGCATTGCAGTGCCGGCGTTGGAA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATACACTAGCTTGGGCTTaGTTCGAGCACCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHTLAWA*FEHHLL
Trigger: AAGGAGATGGTGCTCGAAGCAAGCCCAAGCTAGTGT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGACAATTTTAGGTCTTaGGTCTCCTGTAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLDNFRS*VSCSLT
Trigger: TGTCAAGCTACAGGAGACCCAAGACCTAAAATTGTC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCCACACATTCATAAATaGCCTCATCCCGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHPHIHK*PHPVES
Trigger: GGACTCCACGGGATGAGGCCATTTATGAATGTGTGG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACATCCCGTGGGGCACTaGATGGTGCTTGTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTHPVGH*MVLVLR
Trigger: CCTCAGAACAAGCACCATCCAGTGCCCCACGGGATG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGACTAGTTCATAGCTaGCAATGGTATCTGATCGTG +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLRLVHS*QWYLIV
Trigger: CACGATCAGATACCATTGCCAGCTATGAACTAGTCT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATCTTAGACTCTGCATaGTCCATCACTGCTAACACA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTILDSA*SITANT
Trigger: TGTGTTAGCAGTGATGGACCATGCAGAGTCTAAGAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAAGCTAGGAAAGGTGTaGGGTGCTCTGGAACACCAT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHKLGKV*GALEHH
Trigger: ATGGTGTTCCAGAGCACCCCACACCTTTCCTAGCTT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTCCTTCTCCAGACTTTaGCACTCCTTGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHSFSRL*HSLFWP
Trigger: TGGCCAGAACAAGGAGTGCCAAAGTCTGGAGAAGGA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATCCTTCTCCAGACTTTaGCACTCCTTGTTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESFSRL*HSLFWP
Trigger: TGGCCAGAACAAGGAGTGCCAAAGTCTGGAGAAGGA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGGGATAGAGAATCTTaGTGGGACACGGCGAACTTC +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEWDRES*WDTANF
Trigger: GAAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATCGAGGAGGACCACTTaGAACATCTTCATCGGTTCG +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESRRTT*NIFIGS
Trigger: CGAACCGATGAAGATGTTCCAAGTGGTCCTCCTCGA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACCTGAACTGGACACTTaGACTATATGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTPELDT*TIWPGP
Trigger: GGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGGCAGTGTCCTGAACTaGACACTTGGACTATATGGC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHGSVLN*TLGLYG
Trigger: GCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAGTTTGTCTTCCCAATaGAGGCAGGCTTGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSLSSQ*RQAWCG
Trigger: TCCGCACCAAGCCTGCCTTCATTGGGAAGACAAACT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATGTCATCCCCCAGGGTaGACTCAGTGGGAAGGACAT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTCHPPG*TQWEGH
Trigger: ATGTCCTTCCCACTGAGTTCACCCTGGGGGATGACA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTGGCCAGGGTCAATTaGCTCATATTCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLARVN*LIFLGK
Trigger: TTTTCCCAGGAATATGAGTCAATTGACCCTGGCCAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTACGACCATTGTTGTTaGTTGTGTCAACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLYDHCC*LCQQVR
Trigger: TCTTACCTGTTGACACAAGCAACAACAATGGTCGTA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGCTGTCACCCTATGCTaGAATCCACCAGCACTGTTC +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYAVTLC*NPPALF
Trigger: GAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATTGGATCTGTCCATTTaGCTCCTCAGGTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELDLSI*LLRFLP
Trigger: TGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTTAACAATCAGCTTCTaGGTAGCTCGGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLTISF*VARPST
Trigger: AGTGGATGGCCGAGCTACCCAGAAGCTGATTGTTAA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAACAGGGTCGGAGTATaGGCTGGTTGCATACATCTT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCENRVGV*AGCIHL
Trigger: AAGATGTATGCAACCAGCCCATACTCCGACCCTGTT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTCTTCGTCTGTGATTaGCTGTGGATCCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELFVCD*LWIQIH
Trigger: ATGGATCTGGATCCACAGCCAATCACAGACGAAGAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAACTGGGTCGGTTGGGTaGTGTGAAGGGACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTTGSVG*CEGTSL
Trigger: TAAGGAGGTCCCTTCACACCACCCAACCGACCCAGT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAGCCATCTATGTAGTTaGCATTCACATAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHSHLCS*HSHSHF
Trigger: GAAGTGACTATGTGAATGCCAACTACATAGATGGCT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAGCCATCTATGTAGTTaGCATTCACATAGTCACTTC +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTSHLCS*HSHSHF
Trigger: GAAGTGACTATGTGAATGCCAACTACATAGATGGCT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCACTGCCACACAGGTaGTATTTACACTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPLPHR*YLHFHL
Trigger: CAGGTGGAAGTGTAAATATCACCTGTGTGGCAGTGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGTTTCATCCAGTTGTTaGCATGCTGAGTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYVSSSC*HAEWGP
Trigger: TGGACCCCACTCAGCATGTCAACAACTGGATGAAAC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCTTCCTCTTCGTCTGTaGTTGGCTGTGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLPLRL*LAVDPD
Trigger: ATCTGGATCCACAGCCAATCACAGACGAAGAGGAAG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTCAACCTCTCAATATaGTCTGCAAGTTCCAAGATA +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHFNLSI*SASSKI
Trigger: TATCTTGGAACTTGCAGATCATATTGAGAGGTTGAA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAGTGATCGTATGCAATaGCATTTGCATATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTSDRMQ*HLHICS
Trigger: AGAACAGATATGCAAATGTCATTGCATACGATCACT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGTGATCGTATGCAATaGCATTTGCATATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLSDRMQ*HLHICS
Trigger: AGAACAGATATGCAAATGTCATTGCATACGATCACT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGAGGATTGCAGGTTTTaGCTCTCCGTAAGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEEDCRF*LSVRKL
Trigger: TAGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACGAGCTCCATTCCGGTaGCATTCTCCCCTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTRAPFR*HSPLFL
Trigger: TAGAAACAGGGGAGAATGTCACCGGAATGGAGCTCG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATGAATCTTGAGGTGTaGGCTTTTGAGCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHMNLEV*AFELAR
Trigger: TCTAGCCAGCTCAAAAGCTCACACCTCAAGATTCAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGCCATACCTGGTGTTTaGAAGTTAAGGCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYAIPGV*KLRRLS
Trigger: ACTGAGGCGCCTTAACTTTCAAACACCAGGTATGGC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGGGGTGCCATTGAATaGGGGCAGTATTCATTTGGG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGGAIE*GQYSFG
Trigger: CCCAAATGAATACTGCCCTCATTCAATGGCACCCCC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACATCTGGGGCAGTCTTTaGTGTCACCCTATGCTGCAA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYIWGSL*CHPMLQ
Trigger: TTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGAT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCTTTATGTTTTCATTTaGAGGAACATCAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHLYVFI*RNIRQL
Trigger: CAACTGCCTGATGTTCCTGCAAATGAAAACATAAAG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCCTCTCAATATGATCTaGAAGTTCCAAGATAGGTAT +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLPLNMI*KFQDRY
Trigger: ATACCTATCTTGGAACTTGCAGATCATATTGAGAGG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAAGAGATCCCTGGGTTaGAATATAGGCATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTKRSLG*NIGILF
Trigger: AAACAAAATGCCTATATTGCAACCCAGGGATCTCTT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTCCATTCTTATAAAGTaGAAATGTCCGGACACAGTA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTSILIK*KCPDTV
Trigger: TACTGTGTCCGGACATTTGCACTTTATAAGAATGGA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGTCTTCCCCATCCACTaGAGCATACTTGAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYVFPIH*SILEGV
Trigger: TACTCCCTCAAGTATGCTGCAGTGGATGGGGAAGAC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCTTATCTGGCCATGCTaGTTATTGGGCACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLIWPC*LLGTGE
Trigger: CTCACCTGTGCCCAATAAGCAGCATGGCCAGATAAG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCTCTTATCTGGCCATaGTGCTTATTGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPLIWP*CLLGTG
Trigger: ACCTGTGCCCAATAAGCAGCATGGCCAGATAAGAGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGCTTTGACAGTGATCTaGGCTATTGCTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHALTVI*AIASMT
Trigger: GGTCATTGAAGCAATAGCCCAGATCACTGTCAAAGC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCCAATAGTAGTGATTTaGCTATCAGCTACATTGTGT +
Preference number: 4 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHPIVVI*LSATLC
Trigger: ACACAATGTAGCTGATAGCCAAATCACTACTATTGG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCAATAGTAGTGATTTaGCTATCAGCTACATTGTGT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTPIVVI*LSATLC
Trigger: ACACAATGTAGCTGATAGCCAAATCACTACTATTGG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAGAATTATAATTCTCTaGAATCTCCCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTRIIIL*NLPRQQ
Trigger: CTGCTGTCTTGGGAGATTCCAGAGAATTATAATTCT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTCCGGACACAGTATGTaGCAAGCTCCACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSGHSM*QAPQYP
Trigger: TGGATACTGTGGAGCTTGCCACATACTGTGTCCGGA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGCAGTGTACCACCATTaGCCCTGCATCTGGAGGATT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTAVYHH*PCIWRI
Trigger: AATCCTCCAGATGCAGGGCCAATGGTGGTACACTGC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGATAGAGAATCTTGGTaGGACACGGCGAACTTCTCG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYDRESW*DTANFS
Trigger: CGAGAAGTTCGCCGTGTCCCACCAAGATTCTCTATC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATAGGTATTGGAGGATaGCTAGCCATACCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEIGIGG*LAIPGV
Trigger: AACACCAGGTATGGCTAGCCATCCTCCAATACCTAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAATACTAGTGGAACTTaGGCTGGTACAACTAATATC +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLNTSGT*AGTTNI
Trigger: GATATTAGTTGTACCAGCCCAAGTTCCACTAGTATT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCTGGCATGATTTCATaGTTAGTGGGTGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPGMIS*LVGGIE
Trigger: CTCTATCCCACCCACTAATCATGAAATCATGCCAGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCTGGCCAGGGTCAATTaGCTCATATTCCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLARVN*LIFLGK
Trigger: TTTTCCCAGGAATATGAGTCAATTGACCCTGGCCAG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGAGTCTAAAGACATATaGTGCACCCTTGTGGATATC +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHESKDI*CTLVDI
Trigger: GATATCCACAAGGGTGCATCATATGTCTTTAGACTC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATTTGCTGTCACCCTATaGTGCAATCCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTFAVTL*CNPPAL
Trigger: CAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGATGATAAACACCACTaGAAGGACAGGACCTACGAC +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYDDKHH*KDRTYD
Trigger: GTCGTAGGTCCTGTCCTTGCAGTGGTGTTTATCATC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTTCAGGTTATCATTTaGTTTCAACCTCTCAATATG +
Preference number: 4 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLQVII*FQPLNM
Trigger: CATATTGAGAGGTTGAAAGCAAATGATAACCTGAAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACCGGGAGTGATCGTATaGAATGACATTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEPGVIV*NDICIS
Trigger: AGATATGCAAATGTCATTGCATACGATCACTCCCGG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCCGGGAGTGATCGTATaGAATGACATTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHPGVIV*NDICIS
Trigger: AGATATGCAAATGTCATTGCATACGATCACTCCCGG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGGTGACATTTCTCTCTaGCCATTTCTCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYGDISL*PFLSAW
Trigger: CCAAGCTGAGAGAAATGGGCAGAGAGAAATGTCACC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATCCACTGGTGGAGGTTaGCAACTTACCAAAATACTA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESTGGG*QLTKIL
Trigger: TAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATTTACACTTCCACCTaGCATGATTTCATGATTAGT +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTIYTST*HDFMIS
Trigger: ACTAATCATGAAATCATGCCAGGTGGAAGTGTAAAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACGGCATATCATCTTCTaGTGTCAGATCTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTRHIIF*CQIFCP
Trigger: GGGGCAGAAGATCTGACACCAGAAGATGATATGCCG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATTGACTCATATTCCTaGGAAAACTTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTIDSYS*ENFRLS
Trigger: TGATAACCTGAAGTTTTCCCAGGAATATGAGTCAAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTCTACAACAAAATACTaGTATCTTGCAGATCGTTCA +
Preference number: 4 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTSTTKY*YLADRS
Trigger: TGAACGATCTGCAAGATACCAGTATTTTGTTGTAGA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGAACAGAGGTTGAAGTaGTGCCTTCTGAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYEQRLK*CLLSGD
Trigger: ATCTCCACTCAGAAGGCACCACTTCAACCTCTGTTC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCAAGACAGCAGCACTaGAGTCTTCATAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPRQQH*SLHNCF
Trigger: AAAGCAGTTATGAAGACTTCAGTGCTGCTGTCTTGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTCTGTGGCTGTGAAGTaGTCTTCTTTCTCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSVAVK*SSFSEN
Trigger: GTTCTCTGAGAAAGAAGATCACTTCACAGCCACAGA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGGATATCTGTGGCTGTaGAGTGATCTTCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYGYLWL*SDLLSQ
Trigger: CTGAGAAAGAAGATCACTTCACAGCCACAGATATCC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGAACATCAGGCAGTTaGACAGTAATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGTSGS*TVIMPS
Trigger: GGATGGCATGATTACTGTGCAACTGCCTGATGTTCC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTGTGTTCCCAAAGCATaGGCCAAAAGTCTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYCVPKA*AKSLQL
Trigger: CAACTGAAGACTTTTGGCGCATGCTTTGGGAACACA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGCTGATGGCTTTGATTaGATGGTTCTAGCTGATATT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEADGFD*MVLADI
Trigger: AATATCAGCTAGAACCATGCAATCAAAGCCATCAGC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCAGAGGTTGAAGTGGTaGCTTCTGAGTGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYQRLKW*LLSGDF
Trigger: AAAATCTCCACTCAGAAGGCACCACTTCAACCTCTG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCACTGTTCCCACGATTaGTTAACACAAAGGAATATG +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHHCSHD*LTQRNM
Trigger: CATATTCCTTTGTGTTAACCAATCGTGGGAACAGTG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAACATTTTGACAGTCTaGAAGATATCTACCACCCCT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHNILTV*KISTTP
Trigger: AGGGGTGGTAGATATCTTCCAGACTGTCAAAATGTT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGTATTCATTTGGGTGTaGTTAATCACGAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYVFIWV*LITSLG
Trigger: ACCCAGGCTCGTGATTAACCACACCCAAATGAATAC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAGGGCAGTATTCATTTaGGTGTGGTTAATCACGAGC +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYRAVFI*VWLITS
Trigger: GCTCGTGATTAACCACACCCAAATGAATACTGCCCT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTTGAGGGAATCCAGTTaGTATTTCTTCTGGAACAGA +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLRESS*YFFWNR
Trigger: TCTGTTCCAGAAGAAATACCAACTGGATTCCCTCAA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACTAGCTTTGTCATCATaGCAACTGTGGCACTTCGTT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTLALSS*QLWHFV
Trigger: AACGAAGTGCCACAGTTGTCATGATGACAAAGCTAG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATGGCATCTATTACAATaGAGCAGCCAGTTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTWHLLQ*SSQFCQ
Trigger: TTGGCAGAACTGGCTGCTTCATTGTAATAGATGCCA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGATTCTGATCGTAACTaGTTAATACGACCATTGTTG +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHDSDRN*LIRPLL
Trigger: CAACAATGGTCGTATTAAGCAGTTACGATCAGAATC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTTTATGTTTTCATTTaGAGGAACATCAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELYVFI*RNIRQL
Trigger: CAACTGCCTGATGTTCCTGCAAATGAAAACATAAAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAAAGAGATCCCTGGGTTaGAATATAGGCATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEKRSLG*NIGILF
Trigger: AAACAAAATGCCTATATTGCAACCCAGGGATCTCTT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATCCATTCTTATAAAGTaGAAATGTCCGGACACAGTA +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCESILIK*KCPDTV
Trigger: TACTGTGTCCGGACATTTGCACTTTATAAGAATGGA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAAAATACTGGTATCTTaGAGATCGTTCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYKILVS*RSFSWP
Trigger: TGGCCAGCTGAACGATCTGCAAGATACCAGTATTTT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATTACCTCAAATCTCTaGTTGCTGACTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHITSNL*LLTFFP
Trigger: AGGAAAGAAAGTCAGCAACCAGAGATTTGAGGTAAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAGACTAGTTCATAGCTaGCAATGGTATCTGATCGTG +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYRLVHS*QWYLIV
Trigger: CACGATCAGATACCATTGCCAGCTATGAACTAGTCT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAGAATTATAATTCTCTaGAATCTCCCAAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHRIIIL*NLPRQQ
Trigger: CTGCTGTCTTGGGAGATTCCAGAGAATTATAATTCT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACATCTTAGACTCTGCATaGTCCATCACTGCTAACACA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYILDSA*SITANT
Trigger: TGTGTTAGCAGTGATGGACCATGCAGAGTCTAAGAT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGGATAAAGATGTACTaGTCTTCTGTTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEWIKMY*SSVCTM
Trigger: CATGGTACAAACAGAAGACCAGTACATCTTTATCCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAATGGCTAGCCATACCTaGTGTTTGAAAGTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTMASHT*CLKVKA
Trigger: CGCCTTAACTTTCAAACACCAGGTATGGCTAGCCAT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACTGTTTTTCCACTGGTaGAGGTTGCCAACTTACCAA +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTLFFHW*RLPTYQ
Trigger: TTGGTAAGTTGGCAACCTCCACCAGTGGAAAAACAG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATTGCATGGTTCTAGCTaGTATTTCAGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTLHGSS*YFSCRS
Trigger: GCTTCTACAGCTGAAATATCAGCTAGAACCATGCAA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR TCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGAAGGACATCAAAGTaGGCAGCAATATATGGCTTT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGRTSK*AAIYGF
Trigger: AAAGCCATATATTGCTGCTCACTTTGATGTCCTTCC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCTTCAGGTTATCATTTaGTTTCAACCTCTCAATATG +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLQVII*FQPLNM
Trigger: CATATTGAGAGGTTGAAAGCAAATGATAACCTGAAG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATTCATGATTAGTGGGTaGGATAGAGAATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTFMISG*DRESWW
Trigger: CCACCAAGATTCTCTATCCCACCCACTAATCATGAA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTATTCTTGTCCACTTTaGAGCTGTTTGTTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHYSCPL*SCLFVN
Trigger: ATTTACGAACAAACAGCTCCAAAGTGGACAAGAATA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CAA 72 bp CCTAAACCATGGAAGAACCGAATGGCAGTTAAATCTTaGTGTGGACATACTGTCTATATATACATAGATACC +
Preference number: 4 (lower is better)
Translates to: PKPWKNRMAVKS*CGHTVYIYIDT
Trigger: GGTATCTATGTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCATGGTTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
3UTR CAA 72 bp GCAGTTCCTTACAGATGGGTTCAAGTAATAACATTATaGGGTGTAGAATCAATAGAGCAGTGCATAGTACAA +
Preference number: 4 (lower is better)
Translates to: AVPYRWVQVITL*GVESIEQCIVQ
Trigger: TTGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACCCATCTGTAAGGAACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACACTGTTCCCACGATTaGTTAACACAAAGGAATATG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTHCSHD*LTQRNM
Trigger: CATATTCCTTTGTGTTAACCAATCGTGGGAACAGTG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR GCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACCTCTCAATATGATCTaGAAGTTCCAAGATAGGTAT +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTPLNMI*KFQDRY
Trigger: ATACCTATCTTGGAACTTGCAGATCATATTGAGAGG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTATTCTTGTCCACTTTaGAGCTGTTTGTTCGTAAAT +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYYSCPL*SCLFVN
Trigger: ATTTACGAACAAACAGCTCCAAAGTGGACAAGAATA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACATTGACTCATATTCCTaGGAAAACTTCAGGTTATCA +
Preference number: 4 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYIDSYS*ENFRLS
Trigger: TGATAACCTGAAGTTTTCCCAGGAATATGAGTCAAT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATGGATAAAGATGTACTaGTCTTCTGTTTGTACCATG +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTWIKMY*SSVCTM
Trigger: CATGGTACAAACAGAAGACCAGTACATCTTTATCCA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CCA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATCTACAACAAAATACTaGTATCTTGCAGATCGTTCA +
Preference number: 4 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTSTTKY*YLADRS
Trigger: TGAACGATCTGCAAGATACCAGTATTTTGTTGTAGA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS GCA 90 bp CCCAATGAAGGCAGGCTTGGTGCGGAGCACATCTGGGGCAGTCTTTaGTGTCACCCTATGCTGCAATCCACCAGCACTGTTCCCACGATT +
Preference number: 5 (lower is better)
Translates to: PNEGRLGAEHIWGSL*CHPMLQSTSTVPTI
Trigger: AATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAAGCCTGCCTTCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp GCATGGGCTGACCCTTCGGCTCGCCATTTTCCATTTTCACATAGTGCACCTGATAGAAGCACCCAGGCCTaGAGGAGAGCGTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: AWADPSARHFPFSHSAPDRSTQA*RRACRQ
Trigger: CTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTCT...ATCAGGTGCACTATGTGAAAATGGAAAATGGCGAGCCGAAGGGTCAGCCCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS GCA 90 bp GGCTTGGTGCGGAGCACATCTGGGGCAGTCTTTGCTGTCACCCTATaGTGCAATCCACCAGCACTGTTCCCACGATTGGTTAACACAAAG +
Preference number: 5 (lower is better)
Translates to: GLVRSTSGAVFAVTL*CNPPALFPRLVNTK
Trigger: CTTTGTGTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 90 bp GGTCGGTTGGGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTaGTCTTTCTGGACTCCGACTCTGCCCTCTTCCTGTCAGGTTTAC +
Preference number: 5 (lower is better)
Translates to: GRLGGVKGPPYCLVS*SFWTPTLPSSCQVY
Trigger: GTAAACCTGACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000174023.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 90 bp GGAAAGGTGTGGGGTGCTCTGGAACACCATGATCAGGCCAGGCGGTaGACTGGAATTGTCTCACTTCCCTCTTCTCACTCGATCCATTCT +
Preference number: 5 (lower is better)
Translates to: GKVWGALEHHDQARR*TGIVSLPSSHSIHS
Trigger: AGAATGGATCGAGTGAGAAGAGGGAAGTGAGACAATTCCAGTTCACCGCCTGGCCTGATCATGGTGTTCCAGAGCACCCCACACCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp TGCAAACACTGCTTGATCCACAGGCAGTGTCCTGAACTGGACACTTaGACTATATGGCCCGGGCCCTTTGCTCGTGTGAGCACGTACTTT +
Preference number: 5 (lower is better)
Translates to: CKHCLIHRQCPELDT*TIWPGPFARVSTYF
Trigger: AAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGCAGTGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173662.2
CDS TCA 90 bp CAAGGACAGGACCTACGACCCATATCAAGCCTTCCTCTTCGTCTGTaGTTGGCTGTGGATCCAGATCCATTGACACAACAGGGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: QGQDLRPISSLPLRL*LAVDPDPLTQQGRS
Trigger: ACTCCGACCCTGTTGTGTCAATGGATCTGGATCCACAGCCAATCACAGACGAAGAGGAAGGCTTGATATGGGTCGTAGGTCCTGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 90 bp TGCAGTGTACCACCATTGGCCCTGCATCTGGAGGATTGCAGGTTTTaGCTCTCCGTAAGAAAGCTAGGAAAGGTGTGGGGTGCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: CSVPPLALHLEDCRF*LSVRKLGKVWGALE
Trigger: TTCCAGAGCACCCCACACCTTTCCTAGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTCCAGATGCAGGGCCAATGGTGGTACACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 90 bp TTGGTGCGGAGCACATCTGGGGCAGTCTTTGCTGTCACCCTATGCTaGAATCCACCAGCACTGTTCCCACGATTGGTTAACACAAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVRSTSGAVFAVTLC*NPPALFPRLVNTKE
Trigger: TTCCTTTGTGTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp GCCTTGAGGAGAGCGTGCAGACAGACGGAAGTAGTACAGGCTGTTTaGTTTCAGCCCTTGAAGCCTATAAGATGTGCCTGGCTCAATGGT +
Preference number: 5 (lower is better)
Translates to: ALRRACRQTEVVQAV*FQPLKPIRCAWLNG
Trigger: ACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACTTCCGTCTGTCTGCACGCTCTCCTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp CACTCGATCCATTCTTATAAAGTGCAAATGTCCGGACACAGTATGTaGCAAGCTCCACAGTATCCAGCAGCGTCACCTGGACCAGCCCGT +
Preference number: 5 (lower is better)
Translates to: HSIHSYKVQMSGHSM*QAPQYPAASPGPAR
Trigger: ACGGGCTGGTCCAGGTGACGCTGCTGGATACTGTGGAGCTTGCCACATACTGTGTCCGGACATTTGCACTTTATAAGAATGGATCGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp CCACTTGGAACATCTTCATCGGTTCGAATCAACACGGACAAGCTCTCAGGGCCATCGCTGCTCTTCTCCTaGATCCCCATCTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: PLGTSSSVRINTDKLSGPSLLFS*IPISVD
Trigger: GTCTACAGAGATGGGGATCAAGGAGAAGAGCAGCGA...TGGCCCTGAGAGCTTGTCCGTGTTGATTCGAACCGATGAAGATGTTCCAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR CAA 90 bp GAGACTTTAACAGCTGTGGCGTTGACAGCCTCCACCTCGACTTTTCGAGGAGGAAGTAGTACAGGCTGTTaGGTTTCAGCCCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: ETLTAVALTASTSTFRGGSSTGC*VSALEA
Trigger: GGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACT...TCCTCCTCGAAAAGTCGAGGTGGAGGCTGTCAACGCCACAGCTGTTAAAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTAGAAGCACCCAGGCCTaGAGGAGAGCGTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTRSTQA*RRACRQ
Trigger: CTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTCT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS CCA 90 bp CACTTGATCCACAGGCAGTGTCCTGAACTGGACACTTGGACTATATaGCCCGGGCCCTTTGCTCGTGTGAGCACGTACTTTTACATCATA +
Preference number: 5 (lower is better)
Translates to: HLIHRQCPELDTWTI*PGPFARVSTYFYII
Trigger: TATGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 90 bp TTTTGCAAACACTTGATCCACAGGCAGTGTCCTGAACTGGACACTTaGACTATATGGCCCGGGCCCTTTGCTCGTGTGAGCACGTACTTT +
Preference number: 5 (lower is better)
Translates to: FCKHLIHRQCPELDT*TIWPGPFARVSTYF
Trigger: AAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGTGTTTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 90 bp TGCTTGATCCACAGGCAGTGTCCTGAACTGGACACTTGGACTATATaGCCCGGGCCCTTTGCTCGTGTGAGCACGTACTTTTACATCATA +
Preference number: 5 (lower is better)
Translates to: CLIHRQCPELDTWTI*PGPFARVSTYFYII
Trigger: TATGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173662.2
CDS-3UTR CAA 90 bp CTTGGAACATCTTCATCGGTTCGAATCAACACGGACAAGCTCTCAGGGCCAGGGGTTTGGTTTCAGCCCTaGAAGCCTATAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: LGTSSSVRINTDKLSGPGVWFQP*KPIRCA
Trigger: GGCACATCTTATAGGCTTCAAGGGCTGAAACCAAAC...CCCTGGCCCTGAGAGCTTGTCCGTGTTGATTCGAACCGATGAAGATGTTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172811.2
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGTTCTACTGGGTCGGTaGGGTGGTGTGAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLVLLGR*GGVKGP
Trigger: AGGTCCCTTCACACCACCCAACCGACCCAGTAGAAC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGTGGTGGACACTAGCTaGGGCTTGCTTCGAGCACCA +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTVVDTS*GLLRAP
Trigger: TGGTGCTCGAAGCAAGCCCAAGCTAGTGTCCACCAC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp CAAGCCTTCCTCTTCGTCTGTGATTGGCTGTGGATCCAGATCCATTaGCACAACAGGGTCGGAGTATGGGCTGGTTGCATACATCTTAGA +
Preference number: 5 (lower is better)
Translates to: QAFLFVCDWLWIQIH*HNRVGVWAGCIHLR
Trigger: TCTAAGATGTATGCAACCAGCCCATACTCCGACCCTGTTGTGTCAATGGATCTGGATCCACAGCCAATCACAGACGAAGAGGAAGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS GCA 90 bp GGTCGGTTGGGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTaGTCTTTCTGGACTCCGACTCTGCCCTCTTCCTTTTATAAAGAA +
Preference number: 5 (lower is better)
Translates to: GRLGGVKGPPYCLVS*SFWTPTLPSSFYKE
Trigger: TTCTTTATAAAAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000050757.16
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174180.8
ENSMUST00000174531.8
CDS CCA 90 bp GTACAGGCTGTTTGGTTTCAGCCCTTGAAGCCTATAAGATGTGCCTaGCTCAATGGTGATTCGCTGCTCTTCTCCTTGATCCCCATCTCT +
Preference number: 5 (lower is better)
Translates to: VQAVWFQPLKPIRCA*LNGDSLLFSLIPIS
Trigger: AGAGATGGGGATCAAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAAACAGCCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp GGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCTTCCTGTCAGGTTTACTGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: GGVKGPPYCLVSCSF*TPTLPSSCQVYCFY
Trigger: ATAAAAGCAGTAAACCTGACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098005.10
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGGAGTTCCTGGAGGCTaGGGTAAGGCTTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLGVPGG*GKALTV
Trigger: CACTGTCAAAGCCTTACCCAAGCCTCCAGGAACTCC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCATCTGGGGCAGTCTTaGCTGTCACCCTATGCTGCA +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHHLGQS*LSPYAA
Trigger: TGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGACACTAGCTTGGGCTaGCTTCGAGCACCATCTCCT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHDTSLG*LRAPSP
Trigger: AGGAGATGGTGCTCGAAGCAAGCCCAAGCTAGTGTC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp CCTTTTCGAGCGAATCGTGGGAGAGAGTTATTATCATATATGGACTaGGTGGTGGTTTGGCTAGAGAGGGAGGACACAGAGCCAATCAGG +
Preference number: 5 (lower is better)
Translates to: PFRANRGRELLSYMD*VVVWLEREDTEPIR
Trigger: CCTGATTGGCTCTGTGTCCTCCCTCTCTAGCCAAACCACCACTCAGTCCATATATGATAATAACTCTCTCCCACGATTCGCTCGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212365.2
CDS CCA 90 bp GCTGCTCTTCTCCTTGATCCCCATCTCTGTAGACTAGTTCATAGCTaGCAATGGTATCTGATCGTGGCGGTGTCCAAGACAGCAAAATAC +
Preference number: 5 (lower is better)
Translates to: AALLLDPHLCRLVHS*QWYLIVAVSKTAKY
Trigger: GTATTTTGCTGTCTTGGACACCGCCACGATCAGATACCATTGCCAGCTATGAACTAGTCTACAGAGATGGGGATCAAGGAGAAGAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACGAGTGCCCGCGCTGTaGGTGGCAACACACTCGTAT +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCERVPAL*VATHSY
Trigger: ATACGAGTGTGTTGCCACCAACAGCGCGGGCACTCG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTTAACACAGGCTCACTaGCTGGGCCTCGTCCAATGT +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLTQAH*LGLVQC
Trigger: ACATTGGACGAGGCCCAGCAAGTGAGCCTGTGTTAA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCGCTGCTCTTCTCCTaGATCCCCATCTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHSLLFS*IPISVD
Trigger: GTCTACAGAGATGGGGATCAAGGAGAAGAGCAGCGA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCCAATGAAGGCAGGCTaGGTGCGGAGCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHPMKAG*VRSTSG
Trigger: CCCAGATGTGCTCCGCACCAAGCCTGCCTTCATTGG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGCGGTGAACTGGAATaGTCTCACTTCCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTGGELE*SHFPLL
Trigger: GAGAAGAGGGAAGTGAGACAATTCCAGTTCACCGCC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTATCCTTCTCCAGACTTaGGCACTCCTTGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTILLQT*ALLVLA
Trigger: GGCCAGAACAAGGAGTGCCAAAGTCTGGAGAAGGAT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATGGCCATGCTGCTTATaGGGCACAGGTGAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEWPCCL*GTGERH
Trigger: GTGGCGCTCACCTGTGCCCAATAAGCAGCATGGCCA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp TTGGTTTCAGCCCTTGAAGCCTATAAGATGTGCCTGGCTCAATGGTaGTTCGCTGCTCTTCTCCTTGATCCCCATCTCTGTAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: LVSALEAYKMCLAQW*FAALLLDPHLCRLV
Trigger: AACTAGTCTACAGAGATGGGGATCAAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS TCA 90 bp CTCCCCGAAGCCCACTTTGTTTCTGGCGGAGAGTCTAAAGACATATaGTGCACCCTTGTGGATATCTGTGGCTGTGAAGTGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LPEAHFVSGGESKDI*CTLVDICGCEVIFF
Trigger: AAAGAAGATCACTTCACAGCCACAGATATCCACAAGGGTGCATCATATGTCTTTAGACTCTCCGCCAGAAACAAAGTGGGCTTCGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CCA 90 bp GGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCTTCCTGTCAGGTTTACTTTTATAAA +
Preference number: 5 (lower is better)
Translates to: GGVKGPPYCLVSCSF*TPTLPSSCQVYFYK
Trigger: TTTATAAAAGTAAACCTGACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000174023.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGCTTGGGTAAGGCTTaGACAGTGATCTGGGCTATT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGLGKA*TVIWAI
Trigger: AATAGCCCAGATCACTGTCAAAGCCTTACCCAAGCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAGTAGTACAGGCTGTTaGGTTTCAGCCCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHSSTGC*VSALEA
Trigger: GGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAGTAGTACAGGCTGTTaGGTTTCAGCCCTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLSSTGC*VSALEA
Trigger: GGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGACCTCCTTACTGTTaGGTAAGCTGCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGPPYC*VSCSFW
Trigger: CCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGTTCTACTGGGTCGGTaGGGTGGTGTGAAGGGACCT +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHVLLGR*GGVKGP
Trigger: AGGTCCCTTCACACCACCCAACCGACCCAGTAGAAC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTACAACGATGGTGGAATaGTGTTCCCAAAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTTTMVE*CSQSMR
Trigger: GCGCATGCTTTGGGAACACAATTCCACCATCGTTGT...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCCCATTTCTCTCAGCTaGGTGAGCATCACAACGATG +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTPISLS*VSITTM
Trigger: CATCGTTGTGATGCTCACCAAGCTGAGAGAAATGGG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTCTGGCATCCGTGACCTaGAATTCCCTCAGGATATAC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTLASVT*NSLRIY
Trigger: GTATATCCTGAGGGAATTCAAGGTCACGGATGCCAG...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTTCGAGGAGGACCACTaGGAACATCTTCATCGGTTC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTFEEDH*EHLHRF
Trigger: GAACCGATGAAGATGTTCCAAGTGGTCCTCCTCGAA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp TTCAACTGCGGGCCCATATCAATCGTAGGGAACCCTCTAGGAATCTaGTCCTCACGTAAAACTGTGAGTCTTGTGGACACACTGATTTCT +
Preference number: 5 (lower is better)
Translates to: FNCGPISIVGNPLGI*SSRKTVSLVDTLIS
Trigger: AGAAATCAGTGTGTCCACAAGACTCACAGTTTTACGTGAGGATCAGATTCCTAGAGGGTTCCCTACGATTGATATGGGCCCGCAGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGGAGTTCCTGGAGGCTaGGGTAAGGCTTTGACAGTG +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHGVPGG*GKALTV
Trigger: CACTGTCAAAGCCTTACCCAAGCCTCCAGGAACTCC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTCAGGTTCCTTCCATaGTACCAGAATGGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLRFLP*YQNGGR
Trigger: TCTACCACCATTCTGGTACAATGGAAGGAACCTGAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGATTCAGGTTCTGCTTaGAAGTTTAGTGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHDSGSA*KFSGCP
Trigger: AGGGCAGCCACTAAACTTCAAAGCAGAACCTGAATC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGTTTGGTTTCAGCCCTaGAAGCCTATAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTVWFQP*KPIRCA
Trigger: GGCACATCTTATAGGCTTCAAGGGCTGAAACCAAAC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAGAAGCACCCAGGCCTaGAGGAGAGCGTGCAGACAG +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYRSTQA*RRACRQ
Trigger: CTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTCT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCATCTGGGGCAGTCTTaGCTGTCACCCTATGCTGCA +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHHLGQS*LSPYAA
Trigger: TGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCAATGAAGGCAGGCTaGGTGCGGAGCACATCTGGG +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPMKAG*VRSTSG
Trigger: CCCAGATGTGCTCCGCACCAAGCCTGCCTTCATTGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGGAGGATTGCAGGTTTaGACTCTCCGTAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHGGLQV*TLRKKA
Trigger: AGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTCC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGAGGATTGCAGGTTTaGACTCTCCGTAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTGGLQV*TLRKKA
Trigger: AGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTCC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGAGGGCAGTATTCATTaGGGTGTGGTTAATCACGAG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLEGSIH*GVVNHE
Trigger: CTCGTGATTAACCACACCCAAATGAATACTGCCCTC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGGAAGAAGAGGAACGTaGATATCCCTATACAGGAGG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLGRRGT*ISLYRR
Trigger: CCTCCTGTATAGGGATATCAACGTTCCTCTTCTTCC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp CTGAACTGGACACTTGGACTATATGGCCCGGGCCCTTTGCTCGTGTaGGCACGTACTTTTACATCATATGTAGTATCTGATTTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: LNWTLGLYGPGPLLV*ARTFTSYVVSDFKP
Trigger: TGGCTTAAAATCAGATACTACATATGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS GCA 90 bp TCGGATTCTTCGCTCTGTTCGATCTGCAGCGCTCCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACAGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SDSSLCSICSAPDRN*LIRPLLLLVSTGKK
Trigger: TTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGCGCTGCAGATCGAACAGAGCGAAGAATCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CCA 90 bp GGGGTCCATTGTATAATAAACTCTATACCCTTGGATCTGTCCATTTaGCTCCTCAGGTTCCTTCCATTGTACCAGAATGGTGGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: GVHCIINSIPLDLSI*LLRFLPLYQNGGRA
Trigger: AGCTCTACCACCATTCTGGTACAATGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAGGGTATAGAGTTTATTATACAATGGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp CTTCTCCTTGATCCCCATCTCTGTAGACTAGTTCATAGCTGGCAATaGTATCTGATCGTGGCGGTGTCCAAGACAGCAAAATACTTGTTT +
Preference number: 5 (lower is better)
Translates to: LLLDPHLCRLVHSWQ*YLIVAVSKTAKYLF
Trigger: AAACAAGTATTTTGCTGTCTTGGACACCGCCACGATCAGATACCATTGCCAGCTATGAACTAGTCTACAGAGATGGGGATCAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 90 bp ACAAAGGAATATGACTTCTCAGGCTTCAGGTTAACAATCAGCTTCTaGGTAGCTCGGCCATCCACTTCTTCCACCATTTTCCCATCATCA +
Preference number: 5 (lower is better)
Translates to: TKEYDFSGFRLTISF*VARPSTSSTIFPSS
Trigger: TGATGATGGGAAAATGGTGGAAGAAGTGGATGGCCGAGCTACCCAGAAGCTGATTGTTAACCTGAAGCCTGAGAAGTCATATTCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATTTAACACAGGCTCACTaGCTGGGCCTCGTCCAATGT +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHLTQAH*LGLVQC
Trigger: ACATTGGACGAGGCCCAGCAAGTGAGCCTGTGTTAA...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTTGGATCTGTCCATTaGGCTCCTCAGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELGSVH*APQVPS
Trigger: GGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGTGGATCCAGATCCATaGACACAACAGGGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHVDPDP*TQQGRS
Trigger: ACTCCGACCCTGTTGTGTCAATGGATCTGGATCCAC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGGCGGTGAACTGGAATaGTCTCACTTCCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEGGELE*SHFPLL
Trigger: GAGAAGAGGGAAGTGAGACAATTCCAGTTCACCGCC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATGCCAAAAGTCTTCAGTaGTCTCTGCTAAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHAKSLQ*SLLRAP
Trigger: AGGGGCCCTTAGCAGAGACAACTGAAGACTTTTGGC...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATCCTTCTCCAGACTTaGGCACTCCTTGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHILLQT*ALLVLA
Trigger: GGCCAGAACAAGGAGTGCCAAAGTCTGGAGAAGGAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS GCA 90 bp TCGATCTGCAGCGCTCCTCTTATTGGTGTACCACCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACAGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SICSAPLIGVPPDRN*LIRPLLLLVSTGKK
Trigger: TTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGGTACACCAATAAGAGGAGCGCTGCAGATCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CCA 90 bp CTTGAGGGAGTATTCAGTGATAATGCCATTCTGTTTTTCCACTGGTaGAGGTTGCCAACTTACCAAAATACTAGTGGAACTTGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: LEGVFSDNAILFFHW*RLPTYQNTSGTWAG
Trigger: ACCAGCCCAAGTTCCACTAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGAAAAACAGAATGGCATTATCACTGAATACTCCCTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLIRPLL*LVSTGK
Trigger: CTTACCTGTTGACACAAGCAACAACAATGGTCGTAT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACCAACACAGGTGTAATTaGCTGACTGTCTTACGTCAT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHQHRCN*LTVLRH
Trigger: ATGACGTAAGACAGTCAGCAAATTACACCTGTGTTG...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTATAAACTCTATACCCTaGGATCTGTCCATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLINSIP*DLSIWL
Trigger: GAGCCAAATGGACAGATCCAAGGGTATAGAGTTTAT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGCTGAGTGGGGTCCATaGTATAATAAACTCTATACC +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHAEWGP*YNKLYT
Trigger: GGTATAGAGTTTATTATACAATGGACCCCACTCAGC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGGCTATCAGCTACATaGTGTTTCATCCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTWLSAT*CFIQLL
Trigger: CAACAACTGGATGAAACACAATGTAGCTGATAGCCA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGGCTATCAGCTACATaGTGTTTCATCCAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHWLSAT*CFIQLL
Trigger: CAACAACTGGATGAAACACAATGTAGCTGATAGCCA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGCCAATAGTAGTGATTaGGCTATCAGCTACATTGTG +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTANSSD*AISYIV
Trigger: CACAATGTAGCTGATAGCCAAATCACTACTATTGGC...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTGGGATTCCTTCTATaGCTGATAAGAGAACCCGGG +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELGFLL*LIREPG
Trigger: CCCGGGTTCTCTTATCAGCAATAGAAGGAATCCCAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTGAAGAGATCCCTGGGTaGCAATATAGGCATTTTGTT +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLEEIPG*QYRHFV
Trigger: AACAAAATGCCTATATTGCAACCCAGGGATCTCTTC...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCTCCCCTGTTTCTATTaGTGTCAGCTTCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLLPCFY*CQLLNV
Trigger: TACATTCAGAAGCTGACACAAATAGAAACAGGGGAG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATACAACGATGGTGGAATaGTGTTCCCAAAGCATGCGC +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHTTMVE*CSQSMR
Trigger: GCGCATGCTTTGGGAACACAATTCCACCATCGTTGT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACCCATTTCTCTCAGCTaGGTGAGCATCACAACGATG +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEPISLS*VSITTM
Trigger: CATCGTTGTGATGCTCACCAAGCTGAGAGAAATGGG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAGCCATACCTGGTGTTaGAAAGTTAAGGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHSHTWC*KVKAPQ
Trigger: CTGAGGCGCCTTAACTTTCAAACACCAGGTATGGCT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS GCA 90 bp TCGCTCTGTTCGATCTGCAGCGCTCCAATAGATTCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACAGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SLCSICSAPIDSDRN*LIRPLLLLVSTGKK
Trigger: TTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGAGCGCTGCAGATCGAACAGAGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS GCA 90 bp AGGAATTCCCAAAATCTCATGAGGCTTGAAGTCTTCCCCATCCACTaGAGCATACTTGAGGGAGTATTCAGTGATAATGCCATTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RNSQNLMRLEVFPIH*SILEGVFSDNAILF
Trigger: AAACAGAATGGCATTATCACTGAATACTCCCTCAAGTATGCTGCAGTGGATGGGGAAGACTTCAAGCCTCATGAGATTTTGGGAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACGACCATTGTTGTTGCTaGTGTCAACAGGTAAGAAAT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHDHCCC*CQQVRN
Trigger: ATTTCTTACCTGTTGACACAAGCAACAACAATGGTC...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTCCTCGTCCAATGTTATaGACAGCAACAACTCTAAAT +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLPRPML*TATTLN
Trigger: ATTTAGAGTTGTTGCTGTCAATAACATTGGACGAGG...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTGTCTGAGTGATGACTaGTATATCACTAGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLCLSDD*YITRKR
Trigger: CCTCTTTCTAGTGATATACAAGTCATCACTCAGACA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTGTCTGAGTGATGACTaGTATATCACTAGAAAGAGG +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHCLSDD*YITRKR
Trigger: CCTCTTTCTAGTGATATACAAGTCATCACTCAGACA...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTCGCTGCTCTTCTCCTaGATCCCCATCTCTGTAGAC +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSLLFS*IPISVD
Trigger: GTCTACAGAGATGGGGATCAAGGAGAAGAGCAGCGA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGTTTGGTTTCAGCCCTaGAAGCCTATAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEVWFQP*KPIRCA
Trigger: GGCACATCTTATAGGCTTCAAGGGCTGAAACCAAAC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATCAAAATACTGGTATCTaGCAGATCGTTCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHQNTGI*QIVQLA
Trigger: GGCCAGCTGAACGATCTGCAAGATACCAGTATTTTG...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACAAAATACTGGTATCTaGCAGATCGTTCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEQNTGI*QIVQLA
Trigger: GGCCAGCTGAACGATCTGCAAGATACCAGTATTTTG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACTTGTTCCAAAAGGTACTaGGTAGTATCCGAAGGAATT +
Preference number: 5 (lower is better)
Translates to: VIVPAIQAVLLPRDKQLTCSKRY*VVSEGI
Trigger: AATTCCTTCGGATACTACCAAGTACCTTTTGGAACA...AGTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATCCCCGAAGCCCACTTaGTTTCTGGCGGAGAGTCTA +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTSPKPT*FLAESL
Trigger: TAGACTCTCCGCCAGAAACAAAGTGGGCTTCGGGGA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS TCA 90 bp ATTCATAAATGGCCTCATCCCGTGGAGTCCTTAAGGGCTGTATTCTaGGTACTGATCCAGATCCATCGTCAAATTCTATTACCTCAAATC +
Preference number: 5 (lower is better)
Translates to: IHKWPHPVESLRAVF*VLIQIHRQILLPQI
Trigger: GATTTGAGGTAATAGAATTTGACGATGGATCTGGATCAGTACTCAGAATACAGCCCTTAAGGACTCCACGGGATGAGGCCATTTATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 90 bp GAGTATTCAGTGATAATGCCATTCTGTTTTTCCACTGGTGGAGGTTaGCAACTTACCAAAATACTAGTGGAACTTGGGCTGGTACAACTA +
Preference number: 5 (lower is better)
Translates to: EYSVIMPFCFSTGGG*QLTKILVELGLVQL
Trigger: TAGTTGTACCAGCCCAAGTTCCACTAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGAAAAACAGAATGGCATTATCACTGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACTTGGATCTGTCCATTaGGCTCCTCAGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTLGSVH*APQVPS
Trigger: GGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTTTTTGGGGTACTAAATaGCCAATAGTAGTGATTTGG +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLFWGTK*PIVVIW
Trigger: CCAAATCACTACTATTGGCAATTTAGTACCCCAAAA...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGTCATTGTTCCTGCCATACAGGCAGTTTTGTTGCCAAGAGACAAACAGCTCACAAAGAAGACATATTCTaGTCCACTTTGGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: CHCSCHTGSFVAKRQTAHKEDIF*STLELF
Trigger: AAACAGCTCCAAAGTGGACAAGAATATGTCTTCTTT...GTGAGCTGTTTGTCTCTTGGCAACAAAACTGCCTGTATGGCAGGAACAATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGTGGATCCAGATCCATaGACACAACAGGGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTVDPDP*TQQGRS
Trigger: ACTCCGACCCTGTTGTGTCAATGGATCTGGATCCAC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CAAGCTTGTATGGCAAAGCCATGTAACGGATGGATAGGATGGATCTGTAGCCTTAATGTAGGCTTTCTGTaGTCTATATCCATCAAGGAA +
Preference number: 5 (lower is better)
Translates to: QACMAKPCNGWIGWICSLNVGFL*SISIKE
Trigger: TTCCTTGATGGATATAGACAACAGAAAGCCTACATT...AAGGCTACAGATCCATCCTATCCATCCGTTACATGGCTTTGCCATACAAGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGCCAAAAGTCTTCAGTaGTCTCTGCTAAGGGCCCCT +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTAKSLQ*SLLRAP
Trigger: AGGGGCCCTTAGCAGAGACAACTGAAGACTTTTGGC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCTGGCATCCGTGACCTaGAATTCCCTCAGGATATAC +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLASVT*NSLRIY
Trigger: GTATATCCTGAGGGAATTCAAGGTCACGGATGCCAG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAGCCATACCTGGTGTTaGAAAGTTAAGGCGCCTCAG +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSHTWC*KVKAPQ
Trigger: CTGAGGCGCCTTAACTTTCAAACACCAGGTATGGCT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS GCA 90 bp TTTATAAAGAAGAATAGCAATCACAATACAGATGATAAACACCACTaGAAGGACAGGACCTACGACCCATATCAAGCCTTCCTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: FIKKNSNHNTDDKHH*KDRTYDPYQAFLFV
Trigger: GACGAAGAGGAAGGCTTGATATGGGTCGTAGGTCCTGTCCTTGCAGTGGTGTTTATCATCTGTATTGTGATTGCTATTCTTCTTTATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS GCA 90 bp AGCGCTCCTCTTATTGGTGTACCACCAATAGATTCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACAGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SAPLIGVPPIDSDRN*LIRPLLLLVSTGKK
Trigger: TTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGTGGTACACCAATAAGAGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS CCA 90 bp AGTGAGTGTCATAGAAGTATCAGCTGGAACAATAAGATGCTCCATTaGAAGAAGAGGAACGTTGATATCCCTATACAGGAGGGTATACTT +
Preference number: 5 (lower is better)
Translates to: SECHRSISWNNKMLH*KKRNVDIPIQEGIL
Trigger: AAGTATACCCTCCTGTATAGGGATATCAACGTTCCTCTTCTTCCAATGGAGCATCTTATTGTTCCAGCTGATACTTCTATGACACTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACACACTCGTATTTTCCTaGGTCGGATTCTTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYTLVFS*VGFFAL
Trigger: CAGAGCGAAGAATCCGACCAAGGAAAATACGAGTGT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCTCAGGTTCCTTCCATaGTACCAGAATGGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLRFLP*YQNGGR
Trigger: TCTACCACCATTCTGGTACAATGGAAGGAACCTGAG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATAAACTCTATACCCTaGGATCTGTCCATTTGGCTC +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEINSIP*DLSIWL
Trigger: GAGCCAAATGGACAGATCCAAGGGTATAGAGTTTAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGGACCTCCTTACTGTTaGGTAAGCTGCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTGPPYC*VSCSFW
Trigger: CCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAGAAGAGATCCCTGGGTaGCAATATAGGCATTTTGTT +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEEEIPG*QYRHFV
Trigger: AACAAAATGCCTATATTGCAACCCAGGGATCTCTTC...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACAACTGTGGCACTTCGTaGCTCCCATATCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYNCGTS*LPYHSP
Trigger: TGGAGAATGATATGGGAGCAACGAAGTGCCACAGTT...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAACTCCCCTGTTTCTATTaGTGTCAGCTTCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCELPCFY*CQLLNV
Trigger: TACATTCAGAAGCTGACACAAATAGAAACAGGGGAG...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAATTTGAGGGAATCCAGTaGGTATTTCTTCTGGAACAG +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEFEGIQ*VFLLEQ
Trigger: CTGTTCCAGAAGAAATACCAACTGGATTCCCTCAAA...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAGATTCAGGTTCTGCTTaGAAGTTTAGTGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTDSGSA*KFSGCP
Trigger: AGGGCAGCCACTAAACTTCAAAGCAGAACCTGAATC...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTCCACTGCAGCATACTaGAGGGAGTATTCAGTGATA +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYSTAAY*REYSVI
Trigger: TATCACTGAATACTCCCTCAAGTATGCTGCAGTGGA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAACATATGATGCACCCTaGTGGATATCTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTTYDAP*WISVAV
Trigger: CACAGCCACAGATATCCACAAGGGTGCATCATATGT...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS CCA 90 bp GGCAACACTGTAGCGTGTGGTGGCTATCCCATCAATTTCTTTATATaGTTCTTCAGAATTTTTAGGCTTATGCTGAATGATGTAGTAAGA +
Preference number: 5 (lower is better)
Translates to: GNTVACGGYPINFFI*FFRIFRLMLNDVVR
Trigger: TCTTACTACATCATTCAGCATAAGCCTAAAAATTCTGAAGAACCATATAAAGAAATTGATGGGATAGCCACCACACGCTACAGTGTTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCAACACAGGTGTAATTaGCTGACTGTCTTACGTCAT +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYQHRCN*LTVLRH
Trigger: ATGACGTAAGACAGTCAGCAAATTACACCTGTGTTG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACGCCAATAGTAGTGATTaGGCTATCAGCTACATTGTG +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYANSSD*AISYIV
Trigger: CACAATGTAGCTGATAGCCAAATCACTACTATTGGC...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATATATTCTTGTCCACTTaGGAGCTGTTTGTTCGTAAA +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHIFLST*ELFVRK
Trigger: TTTACGAACAAACAGCTCCAAAGTGGACAAGAATAT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TTGGGTGTAGAATCAATAGAGCAGTGCATAGTACAAAGGTGTAGAAAGTGCGAAATATTCTTGTCCACTTaGGAGCTGTTTGTTCGTAAA +
Preference number: 5 (lower is better)
Translates to: LGVESIEQCIVQRCRKCEIFLST*ELFVRK
Trigger: TTTACGAACAAACAGCTCCAAAGTGGACAAGAATAT...TTCGCACTTTCTACACCTTTGTACTATGCACTGCTCTATTGATTCTACACCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAAAGAAGACATATTCTaGTCCACTTTGGAGCTGTTT +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHKEDIF*STLELF
Trigger: AAACAGCTCCAAAGTGGACAAGAATATGTCTTCTTT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp CCAGTCATTCTGGTGTGTGATATTCCATTAGATCCAACATGTCCAAAATGGCATAATGTAGGCTTTCTGTaGTCTATATCCATCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PVILVCDIPLDPTCPKWHNVGFL*SISIKE
Trigger: TTCCTTGATGGATATAGACAACAGAAAGCCTACATT...ATGCCATTTTGGACATGTTGGATCTAATGGAATATCACACACCAGAATGACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACTTAATACGACCATTGTaGTTGCTTGTGTCAACAGGT +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYLIRPL*LLVSTG
Trigger: ACCTGTTGACACAAGCAACAACAATGGTCGTATTAA...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp TGGAAGAACCGAATGGCAGTTAAATCTTTGTGTGGACATACTGTCTATATATACCCTTTATGTTTTCATTaGCAGGAACATCAGGCAGTT +
Preference number: 5 (lower is better)
Translates to: WKNRMAVKSLCGHTVYIYPLCFH*QEHQAV
Trigger: AACTGCCTGATGTTCCTGCAAATGAAAACATAAAGG...GTATATATAGACAGTATGTCCACACAAAGATTTAACTGCCATTCGGTTCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACATGCTTAATACGACCATaGTTGTTGCTTGTGTCAACA +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTCLIRP*LLLVST
Trigger: TGTTGACACAAGCAACAACAATGGTCGTATTAAGCA...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107289.9
CDS-3UTR CAA 90 bp GGTTCAAGTAATAACATTATTGGGTGTAGAATCAATAGAGCAGTGCATAGTACACCTCGTCCAATGTTATaGACAGCAACAACTCTAAAT +
Preference number: 5 (lower is better)
Translates to: GSSNNIIGCRINRAVHSTPRPML*TATTLN
Trigger: ATTTAGAGTTGTTGCTGTCAATAACATTGGACGAGG...TGTACTATGCACTGCTCTATTGATTCTACACCCAATAATGTTATTACTTGAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102834.8
ENSMUST00000107289.9
CDS TCA 72 bp TCCCGTGGGGCACTGGATGGTGCTTGTTCTGAGGTCTaGGTTAACACAGGCTCACTTGCTGGGCCTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SRGALDGACSEV*VNTGSLAGPRP
Trigger: TGGACGAGGCCCAGCAAGTGAGCCTGTGTTAACTCAGACCTCAGAACAAGCACCATCCAGTGCCCCACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp GGCAGGCTTGGTGCGGAGCACATCTGGGGCAGTCTTTaGTGTCACCCTATGCTGCAATCCACCAGCACTGTT +
Preference number: 6 (lower is better)
Translates to: GRLGAEHIWGSL*CHPMLQSTSTV
Trigger: AACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp AGGCAGGCTTGGTGCGGAGCACATCTGGGGCAGTCTTaGCTGTCACCCTATGCTGCAATCCACCAGCACTGT +
Preference number: 6 (lower is better)
Translates to: RQAWCGAHLGQS*LSPYAAIHQHC
Trigger: ACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAAGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp GGTTTCCCTGGAACTGCCCCAGTGGTGGACACTAGCTaGGGCTTGCTTCGAGCACCATCTCCTTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GFPGTAPVVDTS*GLLRAPSPLVV
Trigger: CACCACCAAAGGAGATGGTGCTCGAAGCAAGCCCAAGCTAGTGTCCACCACTGGGGCAGTTCCAGGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS GCA 72 bp CTGGAACTGCCCCAGTGGTGGACACTAGCTTGGGCTTaGTTCGAGCACCATCTCCTTTGGTGGTGTAAGCTG +
Preference number: 6 (lower is better)
Translates to: LELPQWWTLAWA*FEHHLLWWCKL
Trigger: CAGCTTACACCACCAAAGGAGATGGTGCTCGAAGCAAGCCCAAGCTAGTGTCCACCACTGGGGCAGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 72 bp CTTCCCAATGAAGGCAGGCTTGGTGCGGAGCACATCTaGGGCAGTCTTTGCTGTCACCCTATGCTGCAATCC +
Preference number: 6 (lower is better)
Translates to: LPNEGRLGAEHI*GSLCCHPMLQS
Trigger: GGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCTCCGCACCAAGCCTGCCTTCATTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CCA 72 bp GTTTCCCTGGAACTGCCCCAGTGGTGGACACTAGCTTaGGCTTGCTTCGAGCACCATCTCCTTTGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: VSLELPQWWTLA*ACFEHHLLWWC
Trigger: ACACCACCAAAGGAGATGGTGCTCGAAGCAAGCCCAAGCTAGTGTCCACCACTGGGGCAGTTCCAGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 72 bp CACTTGATCCACAGGCAGTGTCCTGAACTGGACACTTaGACTATATGGCCCGGGCCCTTTGCTCGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: HLIHRQCPELDT*TIWPGPFARVS
Trigger: GCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 72 bp TGCTTGATCCACAGGCAGTGTCCTGAACTGGACACTTaGACTATATGGCCCGGGCCCTTTGCTCGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: CLIHRQCPELDT*TIWPGPFARVS
Trigger: GCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTGGATCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173662.2
CDS CAA 72 bp GGTCGGTTGGGTGGTGTGAAGGGACCTCCTTACTGTTaGGTAAGCTGCTCTTTCTGGACTCCGACTCTGCCC +
Preference number: 6 (lower is better)
Translates to: GRLGGVKGPPYC*VSCSFWTPTLP
Trigger: GGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 72 bp TGGGGTGCTCTGGAACACCATGATCAGGCCAGGCGGTaGACTGGAATTGTCTCACTTCCCTCTTCTCACTCG +
Preference number: 6 (lower is better)
Translates to: WGALEHHDQARR*TGIVSLPSSHS
Trigger: CGAGTGAGAAGAGGGAAGTGAGACAATTCCAGTTCACCGCCTGGCCTGATCATGGTGTTCCAGAGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp CCATTGTACCAGAATGGTGGTAGAGCTCAACATGCGTaGCTGAACATCCCGTGGGGCACTGGATGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PLYQNGGRAQHA*LNIPWGTGWCL
Trigger: CAAGCACCATCCAGTGCCCCACGGGATGTTCAGGCACGCATGTTGAGCTCTACCACCATTCTGGTACAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp CACAGGCAGTGTCCTGAACTGGACACTTGGACTATATaGCCCGGGCCCTTTGCTCGTGTGAGCACGTACTTT +
Preference number: 6 (lower is better)
Translates to: HRQCPELDTWTI*PGPFARVSTYF
Trigger: AAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGTCCAGTTCAGGACACTGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 90 bp GTTCTACTGGGTCGGTTGGGTGGTGTGAAGGGACCTCCTTACTGTTaGGTAAGCTGCTCTTTCTGGACTCCGACTCTGCCCTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: VLLGRLGGVKGPPYC*VSCSFWTPTLPSSC
Trigger: ACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACCCAGTAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000174023.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS GCA 72 bp GGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTaGTCTTTCTGGACTCCGACTCTGCCCTCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: GGVKGPPYCLVS*SFWTPTLPSSC
Trigger: ACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000174023.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CCA 72 bp AGCTCAACATGCGTGCCTGAACATCCCGTGGGGCACTaGATGGTGCTTGTTCTGAGGTCTGAGTTAACACAG +
Preference number: 6 (lower is better)
Translates to: SSTCVPEHPVGH*MVLVLRSELTQ
Trigger: CTGTGTTAACTCAGACCTCAGAACAAGCACCATCCAGTGCCCCACGGGATGTTCAGGCACGCATGTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp GGCCTTGAGGAGAGCGTGCAGACAGACGGAAGTAGTACAGGCTGTTaGGTTTCAGCCCTTGAAGCCTATAAGATGTGCCTGGCTCAATGG +
Preference number: 6 (lower is better)
Translates to: GLEESVQTDGSSTGC*VSALEAYKMCLAQW
Trigger: CCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACTTCCGTCTGTCTGCACGCTCTCCTCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp GTTCTACTGGGTCGGTTGGGTGGTGTGAAGGGACCTCCTTACTGTTaGGTAAGCTGCTCTTTCTGGACTCCGACTCTGCCCTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: VLLGRLGGVKGPPYC*VSCSFWTPTLPSSF
Trigger: AAAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACCCAGTAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000050757.16
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174180.8
ENSMUST00000174531.8
CDS CAA 90 bp CTGCAGTGTACCACCATTGGCCCTGCATCTGGAGGATTGCAGGTTTaGACTCTCCGTAAGAAAGCTAGGAAAGGTGTGGGGTGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LQCTTIGPASGGLQV*TLRKKARKGVGCSG
Trigger: TCCAGAGCACCCCACACCTTTCCTAGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTCCAGATGCAGGGCCAATGGTGGTACACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS TCA 72 bp CCACCATTGGCCCTGCATCTGGAGGATTGCAGGTTTTaGCTCTCCGTAAGAAAGCTAGGAAAGGTGTGGGGT +
Preference number: 6 (lower is better)
Translates to: PPLALHLEDCRF*LSVRKLGKVWG
Trigger: ACCCCACACCTTTCCTAGCTTTCTTACGGAGAGTCAAAACCTGCAATCCTCCAGATGCAGGGCCAATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp TTCAGCTGTAGAAGCACCCAGGCCTTGAGGAGAGCGTaGAGACAGACGGAAGTAGTACAGGCTGTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: FSCRSTQALRRA*RQTEVVQAVWF
Trigger: AAACCAAACAGCCTGTACTACTTCCGTCTGTCTGCACGCTCTCCTCAAGGCCTGGGTGCTTCTACAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp AGCACATCTGGGGCAGTCTTTGCTGTCACCCTATGCTaGAATCCACCAGCACTGTTCCCACGATTGGTTAAC +
Preference number: 6 (lower is better)
Translates to: STSGAVFAVTLC*NPPALFPRLVN
Trigger: GTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAAGACTGCCCCAGATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp GGTGGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTaGTCTTTCTGGACTCCGACTCTGCCCTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: GGVKGPPYCLVS*SFWTPTLPSSF
Trigger: AAAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000050757.16
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174180.8
ENSMUST00000174531.8
CDS CCA 72 bp AAGTTAAGGCGCCTCAGTTCTACTGGGTCGGTTGGGTaGTGTGAAGGGACCTCCTTACTGTTTGGTAAGCTG +
Preference number: 6 (lower is better)
Translates to: KLRRLSSTGSVG*CEGTSLLFGKL
Trigger: CAGCTTACCAAACAGTAAGGAGGTCCCTTCACACCACCCAACCGACCCAGTAGAACTGAGGCGCCTTAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CAA 90 bp GCGTGCAGACAGACGGAAGTAGTACAGGCTGTTTGGTTTCAGCCCTaGAAGCCTATAAGATGTGCCTGGCTCAATGGTGATTCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: ACRQTEVVQAVWFQP*KPIRCAWLNGDSLL
Trigger: GAGCAGCGAATCACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAAACAGCCTGTACTACTTCCGTCTGTCTGCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp GAATCGTGGGAGAGAGTTATTATCATATATGGACTGAGTGGTGGTTaGGCTAGAGAGGGAGGACACAGAGCCAATCAGGGAGGCGTAGGG +
Preference number: 6 (lower is better)
Translates to: ESWERVIIIYGLSGG*AREGGHRANQGGVG
Trigger: CCCTACGCCTCCCTGATTGGCTCTGTGTCCTCCCTCTCTAGCCAAACCACCACTCAGTCCATATATGATAATAACTCTCTCCCACGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212365.2
CDS TCA 72 bp GCCCTTGAAGCCTATAAGATGTGCCTGGCTCAATGGTaGTTCGCTGCTCTTCTCCTTGATCCCCATCTCTGT +
Preference number: 6 (lower is better)
Translates to: ALEAYKMCLAQW*FAALLLDPHLC
Trigger: ACAGAGATGGGGATCAAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS TCA 72 bp CTCTTCGTCTGTGATTGGCTGTGGATCCAGATCCATTaGCACAACAGGGTCGGAGTATGGGCTGGTTGCATA +
Preference number: 6 (lower is better)
Translates to: LFVCDWLWIQIH*HNRVGVWAGCI
Trigger: TATGCAACCAGCCCATACTCCGACCCTGTTGTGTCAATGGATCTGGATCCACAGCCAATCACAGACGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CCA 72 bp AAGGGACCTCCTTACTGTTTGGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCTTCCTGTCAGGTTTAC +
Preference number: 6 (lower is better)
Translates to: KGPPYCLVSCSF*TPTLPSSCQVY
Trigger: GTAAACCTGACAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000174023.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 72 bp GACCTACGACCCATATCAAGCCTTCCTCTTCGTCTGTaGTTGGCTGTGGATCCAGATCCATTGACACAACAG +
Preference number: 6 (lower is better)
Translates to: DLRPISSLPLRL*LAVDPDPLTQQ
Trigger: CTGTTGTGTCAATGGATCTGGATCCACAGCCAATCACAGACGAAGAGGAAGGCTTGATATGGGTCGTAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 72 bp GGAGGACACAGAGCCAATCAGGGAGGCGTAGGGGACTaGATTACTGCTCAAAGCTGGTGTTTGAAAGTTAAG +
Preference number: 6 (lower is better)
Translates to: GGHRANQGGVGD*ITAQSWCLKVK
Trigger: CTTAACTTTCAAACACCAGCTTTGAGCAGTAATTCAGTCCCCTACGCCTCCCTGATTGGCTCTGTGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212365.2
CDS CCA 72 bp CTCCTTGATCCCCATCTCTGTAGACTAGTTCATAGCTaGCAATGGTATCTGATCGTGGCGGTGTCCAAGACA +
Preference number: 6 (lower is better)
Translates to: LLDPHLCRLVHS*QWYLIVAVSKT
Trigger: TGTCTTGGACACCGCCACGATCAGATACCATTGCCAGCTATGAACTAGTCTACAGAGATGGGGATCAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp CATGATTTCATGATTAGTGGGTGGGATAGAGAATCTTaGTGGGACACGGCGAACTTCTCGCAGCTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: HDFMISGWDRES*WDTANFSQLSD
Trigger: GTCAGAGAGCTGCGAGAAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCACCCACTAATCATGAAATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp TTGGATCTGTCCATTTGGCTCCTCAGGTTCCTTCCATaGTACCAGAATGGTGGTAGAGCTCAACATGCGTGC +
Preference number: 6 (lower is better)
Translates to: LDLSIWLLRFLP*YQNGGRAQHAC
Trigger: GCACGCATGTTGAGCTCTACCACCATTCTGGTACAATGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp TCATCTAACTCCATCTCATCAGGGCTCTCCCAGGGCTaGATGAATTTCCCACGCGACTTCTTCAAAGGCACA +
Preference number: 6 (lower is better)
Translates to: SSNSISSGLSQG*MNFPRDFFKGT
Trigger: TGTGCCTTTGAAGAAGTCGCGTGGGAAATTCATCAAGCCCTGGGAGAGCCCTGATGAGATGGAGTTAGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 72 bp GCCCACTTTGTTTCTGGCGGAGAGTCTAAAGACATATaGTGCACCCTTGTGGATATCTGTGGCTGTGAAGTG +
Preference number: 6 (lower is better)
Translates to: AHFVSGGESKDI*CTLVDICGCEV
Trigger: CACTTCACAGCCACAGATATCCACAAGGGTGCATCATATGTCTTTAGACTCTCCGCCAGAAACAAAGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS TCA 72 bp TTTCTCTCTGCTAAGACAGGTGGTTGCCACGATAACTaGACAGAGGTTGAAGTGGTGCCTTCTGAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: FLSAKTGGCHDN*TEVEVVPSEWR
Trigger: TCTCCACTCAGAAGGCACCACTTCAACCTCTGTTCAGTTATCGTGGCAACCACCTGTCTTAGCAGAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS TCA 72 bp GCGAATCGTGGGAGAGAGTTATTATCATATATGGACTaGGTGGTGGTTTGGCTAGAGAGGGAGGACACAGAG +
Preference number: 6 (lower is better)
Translates to: ANRGRELLSYMD*VVVWLEREDTE
Trigger: CTCTGTGTCCTCCCTCTCTAGCCAAACCACCACTCAGTCCATATATGATAATAACTCTCTCCCACGATTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212365.2
CDS GCA 72 bp TATTTTCCTTGGTCGGATTCTTCGCTCTGTTCGATCTaGAGCGCTCCTCTTATTGGTGTACCACCTGATCGT +
Preference number: 6 (lower is better)
Translates to: YFPWSDSSLCSI*SAPLIGVPPDR
Trigger: ACGATCAGGTGGTACACCAATAAGAGGAGCGCTGCAGATCGAACAGAGCGAAGAATCCGACCAAGGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CCA 72 bp TACACTTCCACCTGGCATGATTTCATGATTAGTGGGTaGGATAGAGAATCTTGGTGGGACACGGCGAACTCT +
Preference number: 6 (lower is better)
Translates to: YTSTWHDFMISG*DRESWWDTANS
Trigger: AGAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCACCCACTAATCATGAAATCATGCCAGGTGGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174180.8
CDS CCA 72 bp GATCCCCATCTCTGTAGACTAGTTCATAGCTGGCAATaGTATCTGATCGTGGCGGTGTCCAAGACAGCAAAA +
Preference number: 6 (lower is better)
Translates to: DPHLCRLVHSWQ*YLIVAVSKTAK
Trigger: TTTTGCTGTCTTGGACACCGCCACGATCAGATACCATTGCCAGCTATGAACTAGTCTACAGAGATGGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp GTTTGGTTTCAGCCCTTGAAGCCTATAAGATGTGCCTaGCTCAATGGTGATTCGCTGCTCTTCTCCTTGATC +
Preference number: 6 (lower is better)
Translates to: VWFQPLKPIRCA*LNGDSLLFSLI
Trigger: GATCAAGGAGAAGAGCAGCGAATCACCATTGAGCCAGGCACATCTTATAGGCTTCAAGGGCTGAAACCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000172811.2
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp CATTCTTATAAAGTGCAAATGTCCGGACACAGTATGTaGCAAGCTCCACAGTATCCAGCAGCGTCACCTGGA +
Preference number: 6 (lower is better)
Translates to: HSYKVQMSGHSM*QAPQYPAASPG
Trigger: TCCAGGTGACGCTGCTGGATACTGTGGAGCTTGCCACATACTGTGTCCGGACATTTGCACTTTATAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp GATTTCATGATTAGTGGGTGGGATAGAGAATCTTGGTaGGACACGGCGAACTTCTCGCAGCTCTCTGACATA +
Preference number: 6 (lower is better)
Translates to: DFMISGWDRESW*DTANFSQLSDI
Trigger: TATGTCAGAGAGCTGCGAGAAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCACCCACTAATCATGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp TACACTTCCACCTGGCATGATTTCATGATTAGTGGGTaGGATAGAGAATCTTGGTGGGACACGGCGAACTTC +
Preference number: 6 (lower is better)
Translates to: YTSTWHDFMISG*DRESWWDTANF
Trigger: GAAGTTCGCCGTGTCCCACCAAGATTCTCTATCCCACCCACTAATCATGAAATCATGCCAGGTGGAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS GCA 72 bp TCGCTCTGTTCGATCTGCAGCGCTCCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACA +
Preference number: 6 (lower is better)
Translates to: SLCSICSAPDRN*LIRPLLLLVST
Trigger: TGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGCGCTGCAGATCGAACAGAGCGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CCA 72 bp TTTCTCCCACATTATTCGAGGCCACACATTCATAAATaGCCTCATCCCGTGGAGTCCTTAAGGGCTGTATTC +
Preference number: 6 (lower is better)
Translates to: FLPHYSRPHIHK*PHPVESLRAVF
Trigger: GAATACAGCCCTTAAGGACTCCACGGGATGAGGCCATTTATGAATGTGTGGCCTCGAATAATGTGGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp CCCTATGCTGCAATCCACCAGCACTGTTCCCACGATTaGTTAACACAAAGGAATATGACTTCTCAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: PYAAIHQHCSHD*LTQRNMTSQAS
Trigger: TGAAGCCTGAGAAGTCATATTCCTTTGTGTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp ACCCTATGCTGCAATCCACCAGCACTGTTCCCACGATaGGTTAACACAAAGGAATATGACTTCTCAGGCTTC +
Preference number: 6 (lower is better)
Translates to: TLCCNPPALFPR*VNTKEYDFSGF
Trigger: GAAGCCTGAGAAGTCATATTCCTTTGTGTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp GTTGACATGCTGAGTGGGGTCCATTGTATAATAAACTCTATACCCTaGGATCTGTCCATTTGGCTCCTCAGGTTCCTTCCATTGTACCAG +
Preference number: 6 (lower is better)
Translates to: VDMLSGVHCIINSIP*DLSIWLLRFLPLYQ
Trigger: CTGGTACAATGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAGGGTATAGAGTTTATTATACAATGGACCCCACTCAGCATGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp TTTGCTGTCACCCTATGCTGCAATCCACCAGCACTGTTCCCACGATaGGTTAACACAAAGGAATATGACTTCTCAGGCTTCAGGTTAACA +
Preference number: 6 (lower is better)
Translates to: FAVTLCCNPPALFPR*VNTKEYDFSGFRLT
Trigger: TGTTAACCTGAAGCCTGAGAAGTCATATTCCTTTGTGTTAACCAATCGTGGGAACAGTGCTGGTGGATTGCAGCATAGGGTGACAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000173662.2
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp TTAAGCAGCTCATCTAACTCCATCTCATCAGGGCTCTCCCAGGGCTaGATGAATTTCCCACGCGACTTCTTCAAAGGCACAATTATAATG +
Preference number: 6 (lower is better)
Translates to: LSSSSNSISSGLSQG*MNFPRDFFKGTIIM
Trigger: CATTATAATTGTGCCTTTGAAGAAGTCGCGTGGGAAATTCATCAAGCCCTGGGAGAGCCCTGATGAGATGGAGTTAGATGAGCTGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS TCA 72 bp ACACTTGGACTATATGGCCCGGGCCCTTTGCTCGTGTaGGCACGTACTTTTACATCATATGTAGTATCTGAT +
Preference number: 6 (lower is better)
Translates to: TLGLYGPGPLLV*ARTFTSYVVSD
Trigger: ATCAGATACTACATATGATGTAAAAGTACGTGCTCACACGAGCAAAGGGCCCGGGCCATATAGTCCAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS GCA 72 bp TATTTTCCTTGGTCGGATTCTTCGCTCTGTTCGATCTaGAGCGCTCCTCTTATTGGTGTACCACCAATAGAT +
Preference number: 6 (lower is better)
Translates to: YFPWSDSSLCSI*SAPLIGVPPID
Trigger: ATCTATTGGTGGTACACCAATAAGAGGAGCGCTGCAGATCGAACAGAGCGAAGAATCCGACCAAGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS GCA 72 bp CAAAATCTCATGAGGCTTGAAGTCTTCCCCATCCACTaGAGCATACTTGAGGGAGTATTCAGTGATAATGCC +
Preference number: 6 (lower is better)
Translates to: QNLMRLEVFPIH*SILEGVFSDNA
Trigger: GGCATTATCACTGAATACTCCCTCAAGTATGCTGCAGTGGATGGGGAAGACTTCAAGCCTCATGAGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS CCA 72 bp AAGGGACCTCCTTACTGTTTGGTAAGCTGCTCTTTCTaGACTCCGACTCTGCCCTCTTCCTTTTATAAAGAA +
Preference number: 6 (lower is better)
Translates to: KGPPYCLVSCSF*TPTLPSSFYKE
Trigger: TTCTTTATAAAAGGAAGAGGGCAGAGTCGGAGTCCAGAAAGAGCAGCTTACCAAACAGTAAGGAGGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000050757.16
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174180.8
ENSMUST00000174531.8
CDS CCA 72 bp TGGAGGATGGCTAGCCATACCTTTTCGAGCGAATCGTaGGAGAGAGTTATTATCATATATGGACTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: WRMASHTFSSES*ERVIIIYGLSG
Trigger: ACCACTCAGTCCATATATGATAATAACTCTCTCCCACGATTCGCTCGAAAAGGTATGGCTAGCCATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212365.2
CDS CAA 72 bp CTGAGTGGGGTCCATTGTATAATAAACTCTATACCCTaGGATCTGTCCATTTGGCTCCTCAGGTTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: LSGVHCIINSIP*DLSIWLLRFLP
Trigger: TGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAGGGTATAGAGTTTATTATACAATGGACCCCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp ATTGGAAGAAGAGGAACGTTGATATCCCTATACAGGAGGGTATACTaGGTGATAACTCCATTTCTCTCTGCTAAGACAGGTGGTTGCCAC +
Preference number: 6 (lower is better)
Translates to: IGRRGTLISLYRRVY*VITPFLSAKTGGCH
Trigger: GTGGCAACCACCTGTCTTAGCAGAGAGAAATGGAGTTATCACCAAGTATACCCTCCTGTATAGGGATATCAACGTTCCTCTTCTTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS TCA 72 bp TCCCCCAGGGTGAACTCAGTGGGAAGGACATCAAAGTaGGCAGCAATATATGGCTTTAATTCAACTTCTCTT +
Preference number: 6 (lower is better)
Translates to: SPRVNSVGRTSK*AAIYGFNSTSL
Trigger: AAGAGAAGTTGAATTAAAGCCATATATTGCTGCTCACTTTGATGTCCTTCCCACTGAGTTCACCCTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS GCA 72 bp TATTTTCCTTGGTCGGATTCTTCGCTCTGTTCGATCTaGAGCGCTCCAATAGATTCTGATCGTAACTGCTTA +
Preference number: 6 (lower is better)
Translates to: YFPWSDSSLCSI*SAPIDSDRNCL
Trigger: TAAGCAGTTACGATCAGAATCTATTGGAGCGCTGCAGATCGAACAGAGCGAAGAATCCGACCAAGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS GCA 72 bp GTGATAATGCCATTCTGTTTTTCCACTGGTGGAGGTTaGCAACTTACCAAAATACTAGTGGAACTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: VIMPFCFSTGGG*QLTKILVELGL
Trigger: CAGCCCAAGTTCCACTAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGAAAAACAGAATGGCATTATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS GCA 72 bp AGCGCTCCTCTTATTGGTGTACCACCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACA +
Preference number: 6 (lower is better)
Translates to: SAPLIGVPPDRN*LIRPLLLLVST
Trigger: TGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGGTACACCAATAAGAGGAGCGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CCA 72 bp AGTAGGGACTTAATCCGGCAACACTGTAGCGTGTGGTaGCTATCCCATCAATTTCTTTATATGGTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: SRDLIRQHCSVW*LSHQFLYMVLQ
Trigger: CTGAAGAACCATATAAAGAAATTGATGGGATAGCCACCACACGCTACAGTGTTGCCGGATTAAGTCCCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp GAAATTTCTTTCACCATTTCCTCCCCGAAGCCCACTTaGTTTCTGGCGGAGAGTCTAAAGACATATGATGCA +
Preference number: 6 (lower is better)
Translates to: EISFTISSPKPT*FLAESLKTYDA
Trigger: TGCATCATATGTCTTTAGACTCTCCGCCAGAAACAAAGTGGGCTTCGGGGAGGAAATGGTGAAAGAAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 90 bp GGAGTATTCAGTGATAATGCCATTCTGTTTTTCCACTGGTGGAGGTaGCCAACTTACCAAAATACTAGTGGAACTTGGGCTGGTACAACT +
Preference number: 6 (lower is better)
Translates to: GVFSDNAILFFHWWR*PTYQNTSGTWAGTT
Trigger: AGTTGTACCAGCCCAAGTTCCACTAGTATTTTGGTAAGTTGGCAACCTCCACCAGTGGAAAAACAGAATGGCATTATCACTGAATACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS TCA 72 bp ATACTAGTGGAACTTGGGCTGGTACAACTAATATCTTaGGGAGGAGCTGATGGCTTTGATTGCATGGTTCTA +
Preference number: 6 (lower is better)
Translates to: ILVELGLVQLIS*GGADGFDCMVL
Trigger: TAGAACCATGCAATCAAAGCCATCAGCTCCTCCTCAAGATATTAGTTGTACCAGCCCAAGTTCCACTAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107289.9
ENSMUST00000174180.8
CDS GCA 72 bp TCGATCTGCAGCGCTCCAATAGATTCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACA +
Preference number: 6 (lower is better)
Translates to: SICSAPIDSDRN*LIRPLLLLVST
Trigger: TGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGAGCGCTGCAGATCGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS CAA 72 bp ACCCTTTATGTTTTCATTTGCAGGAACATCAGGCAGTaGCACAGTAATCATGCCATCCAAGTTTGTCTTCCC +
Preference number: 6 (lower is better)
Translates to: TLYVFICRNIRQ*HSNHAIQVCLP
Trigger: GGGAAGACAAACTTGGATGGCATGATTACTGTGCAACTGCCTGATGTTCCTGCAAATGAAAACATAAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CAA 72 bp AGAGGAACGTTGATATCCCTATACAGGAGGGTATACTaGGTGATAACTCCATTTCTCTCTGCTAAGACAGGT +
Preference number: 6 (lower is better)
Translates to: RGTLISLYRRVY*VITPFLSAKTG
Trigger: ACCTGTCTTAGCAGAGAGAAATGGAGTTATCACCAAGTATACCCTCCTGTATAGGGATATCAACGTTCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 90 bp TGTTCGATCTGCAGCGCTCCTGATCGTAACTGCTTAATACGACCATaGTTGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTG +
Preference number: 6 (lower is better)
Translates to: CSICSAPDRNCLIRP*LLLVSTGKKSLNQV
Trigger: CACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGCGCTGCAGATCGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CCA 72 bp TGTATAATAAACTCTATACCCTTGGATCTGTCCATTTaGCTCCTCAGGTTCCTTCCATTGTACCAGAATGGT +
Preference number: 6 (lower is better)
Translates to: CIINSIPLDLSI*LLRFLPLYQNG
Trigger: ACCATTCTGGTACAATGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAGGGTATAGAGTTTATTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CCA 72 bp GTGGAGATTTTGAGGGAATCCAGTTGGTATTTCTTCTaGAACAGAAATTTCTTTCACCATTTCCTCCCCGAA +
Preference number: 6 (lower is better)
Translates to: VEILRESSWYFF*NRNFFHHFLPE
Trigger: TTCGGGGAGGAAATGGTGAAAGAAATTTCTGTTCCAGAAGAAATACCAACTGGATTCCCTCAAAATCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CCA 72 bp CATAGAAGTATCAGCTGGAACAATAAGATGCTCCATTaGAAGAAGAGGAACGTTGATATCCCTATACAGGAG +
Preference number: 6 (lower is better)
Translates to: HRSISWNNKMLH*KKRNVDIPIQE
Trigger: CTCCTGTATAGGGATATCAACGTTCCTCTTCTTCCAATGGAGCATCTTATTGTTCCAGCTGATACTTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 72 bp TTGTATAATAAACTCTATACCCTTGGATCTGTCCATTaGGCTCCTCAGGTTCCTTCCATTGTACCAGAATGG +
Preference number: 6 (lower is better)
Translates to: LYNKLYTLGSVH*APQVPSIVPEW
Trigger: CCATTCTGGTACAATGGAAGGAACCTGAGGAGCCAAATGGACAGATCCAAGGGTATAGAGTTTATTATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 72 bp GGAACAATAAGATGCTCCATTGGAAGAAGAGGAACGTaGATATCCCTATACAGGAGGGTATACTTGGTGATA +
Preference number: 6 (lower is better)
Translates to: GTIRCSIGRRGT*ISLYRRVYLVI
Trigger: TATCACCAAGTATACCCTCCTGTATAGGGATATCAACGTTCCTCTTCTTCCAATGGAGCATCTTATTGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 90 bp AATGTAGTAACCCTTTATGTTTTCATTTGCAGGAACATCAGGCAGTaGCACAGTAATCATGCCATCCAAGTTTGTCTTCCCAATGAAGGC +
Preference number: 6 (lower is better)
Translates to: NVVTLYVFICRNIRQ*HSNHAIQVCLPNEG
Trigger: GCCTTCATTGGGAAGACAAACTTGGATGGCATGATTACTGTGCAACTGCCTGATGTTCCTGCAAATGAAAACATAAAGGGTTACTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
ENSMUST00000212365.2
CDS CAA 90 bp GTATCAGCTGGAACAATAAGATGCTCCATTGGAAGAAGAGGAACGTaGATATCCCTATACAGGAGGGTATACTTGGTGATAACTCCATTT +
Preference number: 6 (lower is better)
Translates to: VSAGTIRCSIGRRGT*ISLYRRVYLVITPF
Trigger: AAATGGAGTTATCACCAAGTATACCCTCCTGTATAGGGATATCAACGTTCCTCTTCTTCCAATGGAGCATCTTATTGTTCCAGCTGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107289.9
ENSMUST00000173662.2
ENSMUST00000174180.8
CDS CAA 90 bp TCGATCTGCAGCGCTCCTGATCGTAACTGCTTAATACGACCATTGTaGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATT +
Preference number: 6 (lower is better)
Translates to: SICSAPDRNCLIRPL*LLVSTGKKSLNQVI
Trigger: AATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGCGCTGCAGATCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CAA 90 bp TGCAGCGCTCCAATAGATTCTGATCGTAACTGCTTAATACGACCATaGTTGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTG +
Preference number: 6 (lower is better)
Translates to: CSAPIDSDRNCLIRP*LLLVSTGKKSLNQV
Trigger: CACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGAGCGCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS CAA 90 bp ATCTGCAGCGCTCCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: ICSAPDRNCLIRPLL*LVSTGKKSLNQVIS
Trigger: AGAAATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGCGCTGCAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CAA 90 bp CCTCTTATTGGTGTACCACCTGATCGTAACTGCTTAATACGACCATaGTTGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTG +
Preference number: 6 (lower is better)
Translates to: PLIGVPPDRNCLIRP*LLLVSTGKKSLNQV
Trigger: CACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGGTACACCAATAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS TCA 72 bp TTTGGCTATCAGCTACATTGTGTTTCATCCAGTTGTTaGCATGCTGAGTGGGGTCCATTGTATAATAAACTC +
Preference number: 6 (lower is better)
Translates to: FGYQLHCVSSSC*HAEWGPLYNKL
Trigger: GAGTTTATTATACAATGGACCCCACTCAGCATGTCAACAACTGGATGAAACACAATGTAGCTGATAGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000102834.8
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174023.8
ENSMUST00000174180.8
ENSMUST00000174531.8
ENSMUST00000174831.8
CDS CAA 90 bp GGTGTACCACCAATAGATTCTGATCGTAACTGCTTAATACGACCATaGTTGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTG +
Preference number: 6 (lower is better)
Translates to: GVPPIDSDRNCLIRP*LLLVSTGKKSLNQV
Trigger: CACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGTGGTACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS GCA 72 bp CTTATTGGTGTACCACCAATAGATTCTGATCGTAACTaGTTAATACGACCATTGTTGTTGCTTGTGTCAACA +
Preference number: 6 (lower is better)
Translates to: LIGVPPIDSDRN*LIRPLLLLVST
Trigger: TGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGTGGTACACCAATAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS CAA 72 bp GCTCCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAA +
Preference number: 6 (lower is better)
Translates to: APDRNCLIRPLL*LVSTGKKSLNQ
Trigger: TTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174180.8
CDS CAA 72 bp CCACCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAA +
Preference number: 6 (lower is better)
Translates to: PPDRNCLIRPLL*LVSTGKKSLNQ
Trigger: TTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CAA 90 bp AGCGCTCCAATAGATTCTGATCGTAACTGCTTAATACGACCATTGTaGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATT +
Preference number: 6 (lower is better)
Translates to: SAPIDSDRNCLIRPL*LLVSTGKKSLNQVI
Trigger: AATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGAGCGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS CAA 90 bp ATTGGTGTACCACCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: IGVPPDRNCLIRPLL*LVSTGKKSLNQVIS
Trigger: AGAAATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGGTACACCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CAA 90 bp CTTATTGGTGTACCACCTGATCGTAACTGCTTAATACGACCATTGTaGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATT +
Preference number: 6 (lower is better)
Translates to: LIGVPPDRNCLIRPL*LLVSTGKKSLNQVI
Trigger: AATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGGTGGTACACCAATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174023.8
CDS CAA 90 bp GCTCCAATAGATTCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: APIDSDRNCLIRPLL*LVSTGKKSLNQVIS
Trigger: AGAAATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000050757.16
ENSMUST00000174531.8
CDS CAA 90 bp CCACCAATAGATTCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATTTCT +
Preference number: 6 (lower is better)
Translates to: PPIDSDRNCLIRPLL*LVSTGKKSLNQVIS
Trigger: AGAAATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS CAA 90 bp GTACCACCAATAGATTCTGATCGTAACTGCTTAATACGACCATTGTaGTTGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAAGTGATT +
Preference number: 6 (lower is better)
Translates to: VPPIDSDRNCLIRPL*LLVSTGKKSLNQVI
Trigger: AATCACTTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATCTATTGGTGGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174831.8
CDS CAA 72 bp GATTCTGATCGTAACTGCTTAATACGACCATTGTTGTaGCTTGTGTCAACAGGTAAGAAATCTTTAAACCAA +
Preference number: 6 (lower is better)
Translates to: DSDRNCLIRPLL*LVSTGKKSLNQ
Trigger: TTGGTTTAAAGATTTCTTACCTGTTGACACAAGCAACAACAATGGTCGTATTAAGCAGTTACGATCAGAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000050757.16
ENSMUST00000098005.10
ENSMUST00000107289.9
ENSMUST00000173376.8
ENSMUST00000174531.8
ENSMUST00000174831.8