RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRC (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026395

Ensembl transcript IDs: ENSMUST00000182283.8, ENSMUST00000182755.8, ENSMUST00000183301.8, ENSMUST00000193650.2, ENSMUST00000195533.6

Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATCATCAACAGGACAAGGAGGACACCTTGAGGTCATTCCAGAATaGTACACATTGTTATTCTTACAACTGAATCCACTTTCAATGGGA +
Preference number: 1 (lower is better)
Translates to: RSSTGQGGHLEVIPE*YTLLFLQLNPLSMG
Trigger: TCCCATTGAAAGTGGATTCAGTTGTAAGAATAACAATGTGTACCATTCTGGAATGACCTCAAGGTGTCCTCCTTGTCCTGTTGATGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR TCA 90 bp AGCATCTTAAACTACAAGATCATCAACAGGACAAGGAGGACACCTTaGGGTCATTCCAGAATGGTACACATTGTTATTCTTACAACTGAA +
Preference number: 1 (lower is better)
Translates to: SILNYKIINRTRRTP*GHSRMVHIVILTTE
Trigger: TTCAGTTGTAAGAATAACAATGTGTACCATTCTGGAATGACCTCAAGGTGTCCTCCTTGTCCTGTTGATGATCTTGTAGTTTAAGATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGATTCCATAAACCACTaGACAGCCATGTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: KSHMLILFTSQISCTHPQDSINH*TAMFFH
Trigger: ATGAAAGAACATGGCTGTGCAGTGGTTTATGGAATC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGAGGTCATTCCAGAATaGTACACATTGTTATTCTTA +
Preference number: 2 (lower is better)
Translates to: KSHMLILFTSQISCTHPQEVIPE*YTLLFL
Trigger: TAAGAATAACAATGTGTACCATTCTGGAATGACCTC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGATTCCATAAACCACTaGACAGCCATGTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPDSINH*TAMFFH
Trigger: ATGAAAGAACATGGCTGTGCAGTGGTTTATGGAATC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGCATTTGAAATGGCTTaGAAGTATTCTCCAATCACA +
Preference number: 2 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPAFEMA*KYSPIT
Trigger: TGTGATTGGAGAATACTTTCAAGCCATTTCAAATGC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGACAAGGAGGACACCTaGAGGTCATTCCAGAATGGT +
Preference number: 3 (lower is better)
Translates to: KSHMLILFTSQISCTHPQDKEDT*RSFQNG
Trigger: ACCATTCTGGAATGACCTCAAGGTGTCCTCCTTGTC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGACAAGGAGGACACCTaGAGGTCATTCCAGAATGGT +
Preference number: 3 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPDKEDT*RSFQNG
Trigger: ACCATTCTGGAATGACCTCAAGGTGTCCTCCTTGTC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR TCA 72 bp AACTACAAGATCATCAACAGGACAAGGAGGACACCTTaGGGTCATTCCAGAATGGTACACATTGTTATTCTT +
Preference number: 3 (lower is better)
Translates to: NYKIINRTRRTP*GHSRMVHIVIL
Trigger: AAGAATAACAATGTGTACCATTCTGGAATGACCTCAAGGTGTCCTCCTTGTCCTGTTGATGATCTTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
3UTR TCA 72 bp AAGGCACACTGTTTCTCGAAAGCATTTGAAATGGCTTaGAAGTATTCTCCAATCACATTTAGATGTCATACA +
Preference number: 3 (lower is better)
Translates to: KAHCFSKAFEMA*KYSPITFRCHT
Trigger: TGTATGACATCTAAATGTGATTGGAGAATACTTTCAAGCCATTTCAAATGCTTTCGAGAAACAGTGTGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACCGGCAGAGGGCGTCTaGGAGTCAGGCTGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSPAEGV*ESGCGD
Trigger: GTCCCCACAGCCTGACTCGCAGACGCCCTCTGCCGG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCCTTCGCCCCAGTACTaGGCACAGACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQPSPQY*AQTSWS
Trigger: AGACCAGGAAGTCTGTGCTCAGTACTGGGGCGAAGG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCTCTCCGTCGAAGTTTaGGGAGCAGGTGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQLSVEV*GAGEGL
Trigger: AAGACCCTCACCTGCTCCTCAAACTTCGACGGAGAG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGACACCAGCACTGCAGTaGACCACAATGGGACCACTG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQTPALQ*TTMGPL
Trigger: CAGTGGTCCCATTGTGGTGCACTGCAGTGCTGGTGT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACCTTCGCCCCAGTACTaGGCACAGACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSPSPQY*AQTSWS
Trigger: AGACCAGGAAGTCTGTGCTCAGTACTGGGGCGAAGG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAGAGTGCCTTCCTCCATaGTTGGCCAGTATTCTGCGC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPECLPP*LASILR
Trigger: GCGCAGAATACTGGCCAAGCATGGAGGAAGGCACTC...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCAGGTCTTTGGGTTCTaGAGGCAGCTCTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQQVFGF*RQLFPF
Trigger: AAAGGGGAAGAGCTGCCTGCAGAACCCAAAGACCTG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGGTATTGCTCATAGCTaGACACCACCCCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSGIAHS*TPPQAV
Trigger: CACGGCCTGGGGTGGTGTGCAGCTATGAGCAATACC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGCTTGGAGGGTCAGTaGTTGCAAGGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSCLEGQ*LQGPEW
Trigger: CCACTCTGGGCCTTGCAAGCACTGACCCTCCAAGCA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182283.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGGCAGCAGAGCTGTTaGGTGCAAGGCTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSRQQSC*VQGWGY
Trigger: ATACCCCCAGCCTTGCACGCAACAGCTCTGCTGCCT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGATCCATCTCTGCAGTaGACGAGGATGGATGCATGC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQDPSLQ*TRMDAC
Trigger: GCATGCATCCATCCTCGTCCACTGCAGAGATGGATC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGACCCGTGGAATGCTCTaGAATTCAGCCAGGAACAGT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQTRGML*NSARNS
Trigger: ACTGTTCCTGGCTGAATTTCAGAGCATTCCACGGGT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGTTTGAGGAGCAGGTaGGGGTCTTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSSLRSR*GSSGTP
Trigger: TGGGGTTCCTGAAGACCCTCACCTGCTCCTCAAACT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGGCTGTTTGTTTTCTTaGCTTGTCCATTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQGCLFS*LVHSGR
Trigger: CCGCCCAGAATGGACAAGTCAAGAAAACAAACAGCC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCCAGGAACAGTCTaGCCTCATCAGCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPQPGTV*PHQQSS
Trigger: GGAAGATTGCTGATGAGGGCAGACTGTTCCTGGCTG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGCTTGGCCAGTATTCTaGGCACTTGTTCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQAWPVF*ALVPVS
Trigger: GGAAACAGGAACAAGTGCGCAGAATACTGGCCAAGC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAACACCAGCACTGCAGTaGACCACAATGGGACCACTG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSTPALQ*TTMGPL
Trigger: CAGTGGTCCCATTGTGGTGCACTGCAGTGCTGGTGT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCATAGACATCCACTTTaGCCTCTGCTTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQHRHPL*PLLPGL
Trigger: AAGGCCTGGAAGCAGAGGGCAAAGTGGATGTCTATG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTACTGTGCCTCCACTTaGACCATCAGACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQYCAST*TIRHLC
Trigger: ACAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGTA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGTCTTTGGGTTCTaGAGGCAGCTCTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPQVFGF*RQLFPF
Trigger: AAAGGGGAAGAGCTGCCTGCAGAACCCAAAGACCTG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACCCCAGGCCGTGCTTTaGGTAGAGACTTTACCACTT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPPQAVL*VETLPL
Trigger: AAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGGGTTCCCACCCCTCTaGTGTCTTCCTGGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSGFPPL*CLPGLY
Trigger: ATAAAGCCCAGGAAGACAGCAGAGGGGTGGGAACCC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGGAAAGGCTGTGTCTaGAGGAATGGTCCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSRKGCV*RNGPRY
Trigger: GTACCGGGGACCATTCCTGCAGACACAGCCTTTCCT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCTGCGAGTCAGGCTGTaGGGACAGGTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPLRVRL*GQVRQQ
Trigger: CTGCTGCCTCACCTGTCCCCACAGCCTGACTCGCAG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGAGGTTTTCATTCCATTaGCCTTGTCCGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQRFSFH*PCPDDL
Trigger: CAGATCGTCCGGACAAGGTCAATGGAATGAAAACCT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCCTCCAACTCCTGTATaGAGGAAGTCTCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQPPTPV*RKSLVF
Trigger: GAATACCAGAGACTTCCTTCATACAGGAGTTGGAGG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGGCTGTGGGGACAGGTaGGGCAGCAGCGTGGATAAC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNGCGDR*GSSVDN
Trigger: GTTATCCACGCTGCTGCCTCACCTGTCCCCACAGCC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQLGVGV*PVTKTS
Trigger: AGAAGTCTTTGTCACAGGGCAAACACCTACACCCAG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACAGCCAGGAACAGTCTaGCCTCATCAGCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSQPGTV*PHQQSS
Trigger: GGAAGATTGCTGATGAGGGCAGACTGTTCCTGGCTG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGATAACTGTGGCCTTTTaGTCCCAGATCATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQITVAF*SQIILQ
Trigger: CTGGAGGATGATCTGGGAGCAAAAGGCCACAGTTAT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACATAGACATCCACTTTaGCCTCTGCTTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPHRHPL*PLLPGL
Trigger: AAGGCCTGGAAGCAGAGGGCAAAGTGGATGTCTATG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACCCCAGGCCGTGCTTTaGGTAGAGACTTTACCACTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSPQAVL*VETLPL
Trigger: AAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGACACAGTTAGCATCCTaGTTGCCTCCATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQTQLAS*LPPSTS
Trigger: TGAAGTGGATGGAGGCAAGCAGGATGCTAACTGTGT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGCCTTCCTCCATGCTTaGCCAGTATTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSAFLHA*PVFCAL
Trigger: AAGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTATGAAGGAAGTCTCTaGTATTCAGCCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQYEGSL*YSASRG
Trigger: CCCTCTGGAGGCTGAATACCAGAGACTTCCTTCATA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGATTCAGAGGACCATCTaGACGGACACAGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQIQRTI*TDTVSI
Trigger: GATGCTAACTGTGTCCGTCCAGATGGTCCTCTGAAT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGGCTCGCAGAACCATTaGCAGCATGTTCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSGSQNH*QHVLVP
Trigger: AGGAACCAGAACATGCTGCCAATGGTTCTGCGAGCC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGTTGCGTGCAAGGCTaGGGGTATCAACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSCCVQG*GYQQER
Trigger: CCTTTCCTGTTGATACCCCCAGCCTTGCACGCAACA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCACAACAATATCTTTaGAAGCCCGAGTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSQQYL*KPECLP
Trigger: AGGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCTTTTAGTGGCCCCTaGGCAGCAATCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSFSGP*AAIIIS
Trigger: AGAAATGATGATTGCTGCTCAGGGGCCACTAAAAGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPLGVGV*PVTKTS
Trigger: AGAAGTCTTTGTCACAGGGCAAACACCTACACCCAG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACATAGACATCCACTTTaGCCTCTGCTTCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSHRHPL*PLLPGL
Trigger: AAGGCCTGGAAGCAGAGGGCAAAGTGGATGTCTATG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATACTGTGCCTCCACTTaGACCATCAGACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSYCAST*TIRHLC
Trigger: ACAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGTA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGCTCACTCTCTTTaGTCATCTCCAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPQAHSL*SSPVHA
Trigger: AGCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGGTATTGCTCATAGCTaGACACCACCCCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPGIAHS*TPPQAV
Trigger: CACGGCCTGGGGTGGTGTGCAGCTATGAGCAATACC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCCACACTTAGCATTTTaGACATCTTTGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQPHLAF*TSLRSA
Trigger: GGCAGACCTCAAAGATGTCCAAAATGCTAAGTGTGG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACGTTTTTCTTGCAGCTaGATCCCCACAACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPRFSCS*IPTTRL
Trigger: AAGCCTAGTTGTGGGGATCCAGCTGCAAGAAAAACG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGGAGGGGTCACTGGGTaGATCTCTCTTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSGGVTG*ISLLHV
Trigger: AACATGAAGAAGAGAGATCCACCCAGTGACCCCTCC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATGGGCTCCTTCCTCTTaGAATGTCTCAGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPWAPSS*NVSAQK
Trigger: CTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTTCCATGTGGTACACTaGTACTGGTACACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQFHVVH*YWYTVL
Trigger: CAGAACTGTGTACCAGTACCAGTGTACCACATGGAA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATGTAGCTGGAGCACATaGGTCATTAGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPCSWST*VIRHTD
Trigger: ATCAGTGTGTCTAATGACTCATGTGCTCCAGCTACA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATCACAACAATATCTTTaGAAGCCCGAGTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPSQQYL*KPECLP
Trigger: AGGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAAGTTTGAGGAGCAGGTaGGGGTCTTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPSLRSR*GSSGTP
Trigger: TGGGGTTCCTGAAGACCCTCACCTGCTCCTCAAACT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCTCTCCGTCGAAGTTTaGGGAGCAGGTGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPLSVEV*GAGEGL
Trigger: AAGACCCTCACCTGCTCCTCAAACTTCGACGGAGAG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACCTCCAACTCCTGTATaGAGGAAGTCTCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSPPTPV*RKSLVF
Trigger: GAATACCAGAGACTTCCTTCATACAGGAGTTGGAGG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATCTTTTAGTGGCCCCTaGGCAGCAATCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPSFSGP*AAIIIS
Trigger: AGAAATGATGATTGCTGCTCAGGGGCCACTAAAAGA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCCTTCGCCCCAGTACTaGGCACAGACTTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNPSPQY*AQTSWS
Trigger: AGACCAGGAAGTCTGTGCTCAGTACTGGGGCGAAGG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLGVGV*PVTKTS
Trigger: AGAAGTCTTTGTCACAGGGCAAACACCTACACCCAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAATCCCGGGGCCCTTGTaGAGCAATGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPIPGPL*SNVFPG
Trigger: CCCAGGAAATACATTGCTGCACAAGGGCCCCGGGAT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGAGTGCCTTCCTCCATaGTTGGCCAGTATTCTGCGC +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPECLPP*LASILR
Trigger: GCGCAGAATACTGGCCAAGCATGGAGGAAGGCACTC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTACACCAGCACTGCAGTaGACCACAATGGGACCACTG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPTPALQ*TTMGPL
Trigger: CAGTGGTCCCATTGTGGTGCACTGCAGTGCTGGTGT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAACACAGTTAGCATCCTaGTTGCCTCCATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSTQLAS*LPPSTS
Trigger: TGAAGTGGATGGAGGCAAGCAGGATGCTAACTGTGT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGGGTTCCCACCCCTCTaGTGTCTTCCTGGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPGFPPL*CLPGLY
Trigger: ATAAAGCCCAGGAAGACAGCAGAGGGGTGGGAACCC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGTGTGGATTCAGTGGTaGGAGCAGGTAAGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPVWIQW*EQVRGH
Trigger: GTGACCCCTTACCTGCTCGCACCACTGAATCCACAC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACCACACTTAGCATTTTaGACATCTTTGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPPHLAF*TSLRSA
Trigger: GGCAGACCTCAAAGATGTCCAAAATGCTAAGTGTGG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACGTTTTTCTTGCAGCTaGATCCCCACAACTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSRFSCS*IPTTRL
Trigger: AAGCCTAGTTGTGGGGATCCAGCTGCAAGAAAAACG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAAATGTCAGAATGGATTaGCTCCACATCCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPNVRMD*LHIHQL
Trigger: CAGCTGATGGATGTGGAGCCAATCCATTCTGACATT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATATGAAGGAAGTCTCTaGTATTCAGCCTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSYEGSL*YSASRG
Trigger: CCCTCTGGAGGCTGAATACCAGAGACTTCCTTCATA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAATACTTCATCCCTTCTaGGGAAGCCTTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSILHPF*GSLGKL
Trigger: AAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTAT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAATTCAGAGGACCATCTaGACGGACACAGTTAGCATC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSIQRTI*TDTVSI
Trigger: GATGCTAACTGTGTCCGTCCAGATGGTCCTCTGAAT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGTAGCTGGAGCACATaGGTCATTAGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSCSWST*VIRHTD
Trigger: ATCAGTGTGTCTAATGACTCATGTGCTCCAGCTACA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACTCATTTCTTATAACTaGATCTCCCTCGTACACTCC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPLISYN*ISLVHS
Trigger: GGAGTGTACGAGGGAGATTCAGTTATAAGAAATGAG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACGTTCAGCTTCTGAATaGTGTAATCAGGACATCGTT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPRSASE*CNQDIV
Trigger: AACGATGTCCTGATTACATCATTCAGAAGCTGAACG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATAGTTTGAGGAGCAGGTaGGGGTCTTCAGGAACCCCA +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNSLRSR*GSSGTP
Trigger: TGGGGTTCCTGAAGACCCTCACCTGCTCCTCAAACT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCTCTCCGTCGAAGTTTaGGGAGCAGGTGAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNLSVEV*GAGEGL
Trigger: AAGACCCTCACCTGCTCCTCAAACTTCGACGGAGAG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCTGTTTCTCCAAACTaGTTGTATTCCACTAAAGCC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSVSPN*LYSTKA
Trigger: GGCTTTAGTGGAATACAATCAGTTTGGAGAAACAGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACACTTTCCAAGAGATTaGACAAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSHFPRD*TRHRTT
Trigger: GGTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGGTAAGGGGTCACTTTaGGGCAGAAGAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPGKGSL*GRRRAF
Trigger: GAATGCCCTTCTTCTGCCTCAAAGTGACCCCTTACC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATGTCAGCTTGGCTGCTaGATGTCTGAGTGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPCQLGC*MSECQL
Trigger: GAGCTGACACTCAGACATTCAGCAGCCAAGCTGACA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATATCCCGGGGCCCTTGTaGAGCAATGTATTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNIPGPL*SNVFPG
Trigger: CCCAGGAAATACATTGCTGCACAAGGGCCCCGGGAT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGAGTGCCTTCCTCCATaGTTGGCCAGTATTCTGCGC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNECLPP*LASILR
Trigger: GCGCAGAATACTGGCCAAGCATGGAGGAAGGCACTC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACTCATCTCCAGTTCATaGTTAAGTGGCACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPLISSS*LSGTLL
Trigger: TAACAGAGTGCCACTTAAGCATGAACTGGAGATGAG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCTTTGGAATATCATCTaGCAAAAGTCACCGATCGTT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQLWNII*QKSPIV
Trigger: AACGATCGGTGACTTTTGGCAGATGATATTCCAAAG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCAGGTCTTTGGGTTCTaGAGGCAGCTCTTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPQVFGF*RQLFPF
Trigger: AAAGGGGAAGAGCTGCCTGCAGAACCCAAAGACCTG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCCCCAGGCCGTGCTTTaGGTAGAGACTTTACCACTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPPQAVL*VETLPL
Trigger: AAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGGGTTCCCACCCCTCTaGTGTCTTCCTGGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNGFPPL*CLPGLY
Trigger: ATAAAGCCCAGGAAGACAGCAGAGGGGTGGGAACCC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACCACACTTAGCATTTTaGACATCTTTGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSPHLAF*TSLRSA
Trigger: GGCAGACCTCAAAGATGTCCAAAATGCTAAGTGTGG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGAACAAAATGTCAGAATaGATTGGCTCCACATCCATC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQNKMSE*IGSTSI
Trigger: GATGGATGTGGAGCCAATCCATTCTGACATTTTGTT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTTGCTGAATACCCGTaGAATGCTCTGAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLAEYP*NALKFS
Trigger: GCTGAATTTCAGAGCATTCCACGGGTATTCAGCAAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGCCTTCCTCCATGCTTaGCCAGTATTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPAFLHA*PVFCAL
Trigger: AAGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGTGGTACACTGGTACTaGTACACAGTTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPVVHWY*YTVLGS
Trigger: GGAGCCCAGAACTGTGTACCAGTACCAGTGTACCAC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATTCCATGTGGTACACTaGTACTGGTACACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSFHVVH*YWYTVL
Trigger: CAGAACTGTGTACCAGTACCAGTGTACCACATGGAA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGATCCATCTCTGCAGTaGACGAGGATGGATGCATGC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPDPSLQ*TRMDAC
Trigger: GCATGCATCCATCCTCGTCCACTGCAGAGATGGATC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGGCTCGCAGAACCATTaGCAGCATGTTCTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPGSQNH*QHVLVP
Trigger: AGGAACCAGAACATGCTGCCAATGGTTCTGCGAGCC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACGATCTGCTTTTGTGTaGAAATTGCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSRSAFV*KLHFSA
Trigger: TGCTGAGAAGTGCAATTTTCACACAAAAGCAGATCG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAAAGAACCTCCACTTCTaGCTACCAAAATGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPKNLHF*LPKCKR
Trigger: CCTTTTACATTTTGGTAGTCAGAAGTGGAGGTTCTT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTACCCGTGGAATGCTCTaGAATTCAGCCAGGAACAGT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPTRGML*NSARNS
Trigger: ACTGTTCCTGGCTGAATTTCAGAGCATTCCACGGGT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTGGTGAATTGGATATaGGTCACTTCTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLVNWI*VTSLPV
Trigger: AACTGGAAGAGAAGTGACTCATATCCAATTCACCAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGGCTGTTTGTTTTCTTaGCTTGTCCATTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPGCLFS*LVHSGR
Trigger: CCGCCCAGAATGGACAAGTCAAGAAAACAAACAGCC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAATGATATGTGGTCTCTaGAGAGCCATTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSMICGL*RAISSF
Trigger: GAAAGAGGAAATGGCTCTTCAGAGACCACATATCAT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACTTTTGTGTGAAAATTaGACTTCTCAGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPLLCEN*TSQQSH
Trigger: ATGGGACTGCTGAGAAGTGCAATTTTCACACAAAAG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTTGTCCGGACGATCTaGTTTTGTGTGAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLVRTI*FCVKIA
Trigger: TGCAATTTTCACACAAAAGCAGATCGTCCGGACAAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGCTTGGCCAGTATTCTaGGCACTTGTTCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPAWPVF*ALVPVS
Trigger: GGAAACAGGAACAAGTGCGCAGAATACTGGCCAAGC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATACTGTGCCTCCACTTaGACCATCAGACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPYCAST*TIRHLC
Trigger: ACAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGTA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTCATCTCCAGTTCATaGTTAAGTGGCACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLISSS*LSGTLL
Trigger: TAACAGAGTGCCACTTAAGCATGAACTGGAGATGAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCACATCTTCTGTTTCTaGACTTTCCAAGAGATTGAA +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQHIFCF*TFQEIE
Trigger: TTCAATCTCTTGGAAAGTGCAGAAACAGAAGATGTG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGTTCATCTAAATTGCTaGATCTTTTCTTGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQVHLNC*IFSCAD
Trigger: ATCTGCGCAAGAAAAGATCCAGCAATTTAGATGAAC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAAACAAAATGTCAGAATaGATTGGCTCCACATCCATC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPNKMSE*IGSTSI
Trigger: GATGGATGTGGAGCCAATCCATTCTGACATTTTGTT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGGCATTTATGTAGGTaGACCCTGCATCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSWHLCR*TLHLHL
Trigger: TAAATGGAGATGCAGGGTCCACCTACATAAATGCCA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGCCTTCCTCCATGCTTaGCCAGTATTCTGCGCACTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNAFLHA*PVFCAL
Trigger: AAGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACCAGGCCTTCCAGCATaGCATCAATTCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPPGLPA*HQFQCR
Trigger: CCTACATTGGAATTGATGCCATGCTGGAAGGCCTGG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGGAGGGGTCACTGGGTaGATCTCTCTTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPGGVTG*ISLLHV
Trigger: AACATGAAGAAGAGAGATCCACCCAGTGACCCCTCC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGAGCAATCATCATTTCTaGTTTCCAGTAACTCATCAC +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSNHHF*FPVTHH
Trigger: GTGATGAGTTACTGGAAACCAGAAATGATGATTGCT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGGTACACTGGTACTaGTACACAGTTCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNVVHWY*YTVLGS
Trigger: GGAGCCCAGAACTGTGTACCAGTACCAGTGTACCAC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGATCCATCTCTGCAGTaGACGAGGATGGATGCATGC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNDPSLQ*TRMDAC
Trigger: GCATGCATCCATCCTCGTCCACTGCAGAGATGGATC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGAGAGACTTTACCACTTaGAAAACATCAACCACATCT +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQRDFTT*KTSTTS
Trigger: AGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAAGGTTTTCATTCCATTaGCCTTGTCCGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPRFSFH*PCPDDL
Trigger: CAGATCGTCCGGACAAGGTCAATGGAATGAAAACCT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTATTTCCTGGGTTCCTTaGAGCCATCAATGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPISWVP*SHQCSW
Trigger: CCAGCTACATTGATGGCTTCAAGGAACCCAGGAAAT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAATTTCCTGGGTTCCTTaGAGCCATCAATGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPISWVP*SHQCSW
Trigger: CCAGCTACATTGATGGCTTCAAGGAACCCAGGAAAT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATCTGTTTCTCCAAACTaGTTGTATTCCACTAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSSVSPN*LYSTKA
Trigger: GGCTTTAGTGGAATACAATCAGTTTGGAGAAACAGA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGGCTGTTTGTTTTCTTaGCTTGTCCATTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNGCLFS*LVHSGR
Trigger: CCGCCCAGAATGGACAAGTCAAGAAAACAAACAGCC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAATAACTGTGGCCTTTTaGTCCCAGATCATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPITVAF*SQIILQ
Trigger: CTGGAGGATGATCTGGGAGCAAAAGGCCACAGTTAT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACAGGCTCACTCTCTTTaGTCATCTCCAGTTCATGCT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPQAHSL*SSPVHA
Trigger: AGCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTTTGGAATATCATCTaGCAAAAGTCACCGATCGTT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLWNII*QKSPIV
Trigger: AACGATCGGTGACTTTTGGCAGATGATATTCCAAAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTACACAGTTAGCATCCTaGTTGCCTCCATCCACTTCA +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPTQLAS*LPPSTS
Trigger: TGAAGTGGATGGAGGCAAGCAGGATGCTAACTGTGT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTTTTCTGGCTCACAGTaGAGTACATATGAAATATTG +
Preference number: 4 (lower is better)
Translates to: KSHMLILFTSQISCTHPQFSGSQ*STYEIL
Trigger: CAATATTTCATATGTACTCCACTGTGAGCCAGAAAA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAACAAAATGTCAGAATaGATTGGCTCCACATCCATC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSNKMSE*IGSTSI
Trigger: GATGGATGTGGAGCCAATCCATTCTGACATTTTGTT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCCAGGCCTTCCAGCATaGCATCAATTCCAATGTAGG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNPGLPA*HQFQCR
Trigger: CCTACATTGGAATTGATGCCATGCTGGAAGGCCTGG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGGAGGGGTCACTGGGTaGATCTCTCTTCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNGGVTG*ISLLHV
Trigger: AACATGAAGAAGAGAGATCCACCCAGTGACCCCTCC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAAGCAATCATCATTTCTaGTTTCCAGTAACTCATCAC +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPSNHHF*FPVTHH
Trigger: GTGATGAGTTACTGGAAACCAGAAATGATGATTGCT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATGGGCTCCTTCCTCTTaGAATGTCTCAGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPWAPSS*NVSAQK
Trigger: CTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTACTGGTACACAGTTCTaGGCTCCTTCCTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPTGTQF*APSSWN
Trigger: ATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTATACTTCATCCCTTCTaGGGAAGCCTTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPILHPF*GSLGKL
Trigger: AAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTAT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATCTTTCAGAGATGCTTaGGGGTGTGGATTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPSFRDA*GCGFSG
Trigger: ACCACTGAATCCACACCCCCAAGCATCTCTGAAAGA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTGTAGCTGGAGCACATaGGTCATTAGACACACTGAT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPCSWST*VIRHTD
Trigger: ATCAGTGTGTCTAATGACTCATGTGCTCCAGCTACA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAACAGTGGAGTACATATaGAATATTGTCACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSTVEYI*NIVTVA
Trigger: TGCAACAGTGACAATATTTCATATGTACTCCACTGT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATATTTCCTGGGTTCCTTaGAGCCATCAATGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNISWVP*SHQCSW
Trigger: CCAGCTACATTGATGGCTTCAAGGAACCCAGGAAAT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCCTCCAACTCCTGTATaGAGGAAGTCTCTGGTATTC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNPPTPV*RKSLVF
Trigger: GAATACCAGAGACTTCCTTCATACAGGAGTTGGAGG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTCTTTTAGTGGCCCCTaGGCAGCAATCATCATTTCT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPSFSGP*AAIIIS
Trigger: AGAAATGATGATTGCTGCTCAGGGGCCACTAAAAGA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATTCTGTTTGAGGTCCTaGATCATAGACACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPFCLRS*IIDTRS
Trigger: AGACCTGGTGTCTATGATTCAGGACCTCAAACAGAA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTTCTGTTTGAGGTCCTaGATCATAGACACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPFCLRS*IIDTRS
Trigger: AGACCTGGTGTCTATGATTCAGGACCTCAAACAGAA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACACTTTCCAAGAGATTaGACAAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPHFPRD*TRHRTT
Trigger: GGTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGACATCTTTGAGGTCTaGCTTAAAAGTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSDIFEV*LKSLIT
Trigger: AGTAATCAGACTTTTAAGGCAGACCTCAAAGATGTC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACACATCTTCTGTTTCTaGACTTTCCAAGAGATTGAA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSHIFCF*TFQEIE
Trigger: TTCAATCTCTTGGAAAGTGCAGAAACAGAAGATGTG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATTTTCTGGCTCACAGTaGAGTACATATGAAATATTG +
Preference number: 4 (lower is better)
Translates to: HKSHMLILFTSQISCTHPFSGSQ*STYEIL
Trigger: CAATATTTCATATGTACTCCACTGTGAGCCAGAAAA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAAATGTCAGAATGGATTaGCTCCACATCCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPNVRMD*LHIHQL
Trigger: CAGCTGATGGATGTGGAGCCAATCCATTCTGACATT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACTTGCTGAATACCCGTaGAATGCTCTGAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPLAEYP*NALKFS
Trigger: GCTGAATTTCAGAGCATTCCACGGGTATTCAGCAAG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACAGTTCATGCTTAAGTaGCACTCTGTTAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSQFMLK*HSVKVI
Trigger: TATGACTTTAACAGAGTGCCACTTAAGCATGAACTG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGCAATCATCATTTCTaGTTTCCAGTAACTCATCAC +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSSNHHF*FPVTHH
Trigger: GTGATGAGTTACTGGAAACCAGAAATGATGATTGCT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTGGGCTCCTTCCTCTTaGAATGTCTCAGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNWAPSS*NVSAQK
Trigger: CTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATACTGGTACACAGTTCTaGGCTCCTTCCTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNTGTQF*APSSWN
Trigger: ATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTTCCATGTGGTACACTaGTACTGGTACACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPFHVVH*YWYTVL
Trigger: CAGAACTGTGTACCAGTACCAGTGTACCACATGGAA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATATACTTCATCCCTTCTaGGGAAGCCTTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNILHPF*GSLGKL
Trigger: AAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTAT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGAGACTTTACCACTTaGAAAACATCAACCACATCT +
Preference number: 4 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSRDFTT*KTSTTS
Trigger: AGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACGATCTGCTTTTGTGTaGAAATTGCACTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPRSAFV*KLHFSA
Trigger: TGCTGAGAAGTGCAATTTTCACACAAAAGCAGATCG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTCGTACACTCCATTGTaGAAAGAGACCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPSYTPL*KETRNS
Trigger: TGAGTTTCTGGTCTCTTTTCACAATGGAGTGTACGA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATCGTACACTCCATTGTaGAAAGAGACCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPSYTPL*KETRNS
Trigger: TGAGTTTCTGGTCTCTTTTCACAATGGAGTGTACGA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCTCATTTCTTATAACTaGATCTCCCTCGTACACTCC +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPLISYN*ISLVHS
Trigger: GGAGTGTACGAGGGAGATTCAGTTATAAGAAATGAG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACGTTCAGCTTCTGAATaGTGTAATCAGGACATCGTT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPRSASE*CNQDIV
Trigger: AACGATGTCCTGATTACATCATTCAGAAGCTGAACG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACTGGTGAATTGGATATaGGTCACTTCTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPLVNWI*VTSLPV
Trigger: AACTGGAAGAGAAGTGACTCATATCCAATTCACCAG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCTGGTGAATTGGATATaGGTCACTTCTCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPLVNWI*VTSLPV
Trigger: AACTGGAAGAGAAGTGACTCATATCCAATTCACCAG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATCTGTCGCCTTAGCTTaGCAACATAACCATAGACAT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPSVALA*QHNHRH
Trigger: ATGTCTATGGTTATGTTGTCAAGCTAAGGCGACAGA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCACTTTCCAAGAGATTaGACAAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNHFPRD*TRHRTT
Trigger: GGTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACTTGTCCGGACGATCTaGTTTTGTGTGAAAATTGCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPLVRTI*FCVKIA
Trigger: TGCAATTTTCACACAAAAGCAGATCGTCCGGACAAG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATAATGTCAGAATGGATTaGCTCCACATCCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNNVRMD*LHIHQL
Trigger: CAGCTGATGGATGTGGAGCCAATCCATTCTGACATT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCTTGCTGAATACCCGTaGAATGCTCTGAAATTCAGC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNLAEYP*NALKFS
Trigger: GCTGAATTTCAGAGCATTCCACGGGTATTCAGCAAG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTGGCATTTATGTAGGTaGACCCTGCATCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPWHLCR*TLHLHL
Trigger: TAAATGGAGATGCAGGGTCCACCTACATAAATGCCA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAAAGAACCTCCACTTCTaGCTACCAAAATGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPKNLHF*LPKCKR
Trigger: CCTTTTACATTTTGGTAGTCAGAAGTGGAGGTTCTT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTCGTACACTCCATTGTaGAAAGAGACCAGAAACTCA +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNSYTPL*KETRNS
Trigger: TGAGTTTCTGGTCTCTTTTCACAATGGAGTGTACGA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCTCATTTCTTATAACTaGATCTCCCTCGTACACTCC +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNLISYN*ISLVHS
Trigger: GGAGTGTACGAGGGAGATTCAGTTATAAGAAATGAG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCGTTCAGCTTCTGAATaGTGTAATCAGGACATCGTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNRSASE*CNQDIV
Trigger: AACGATGTCCTGATTACATCATTCAGAAGCTGAACG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTCTGTCGCCTTAGCTTaGCAACATAACCATAGACAT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNSVALA*QHNHRH
Trigger: ATGTCTATGGTTATGTTGTCAAGCTAAGGCGACAGA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTCTGTTTCTCCAAACTaGTTGTATTCCACTAAAGCC +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPSVSPN*LYSTKA
Trigger: GGCTTTAGTGGAATACAATCAGTTTGGAGAAACAGA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACTTTTGTGTGAAAATTaGACTTCTCAGCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPLLCEN*TSQQSH
Trigger: ATGGGACTGCTGAGAAGTGCAATTTTCACACAAAAG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR TCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAACAGTGGAGTACATATaGAATATTGTCACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPTVEYI*NIVTVA
Trigger: TGCAACAGTGACAATATTTCATATGTACTCCACTGT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGACATCTTTGAGGTCTaGCTTAAAAGTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPDIFEV*LKSLIT
Trigger: AGTAATCAGACTTTTAAGGCAGACCTCAAAGATGTC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGTTGTTCATCTAAATTaGTGGATCTTTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPVVHLN*WIFSCA
Trigger: TGCGCAAGAAAAGATCCAGCAATTTAGATGAACAAC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCTTTGGAATATCATCTaGCAAAAGTCACCGATCGTT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNLWNII*QKSPIV
Trigger: AACGATCGGTGACTTTTGGCAGATGATATTCCAAAG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCACATCTTCTGTTTCTaGACTTTCCAAGAGATTGAA +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPHIFCF*TFQEIE
Trigger: TTCAATCTCTTGGAAAGTGCAGAAACAGAAGATGTG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGTTCATCTAAATTGCTaGATCTTTTCTTGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPVHLNC*IFSCAD
Trigger: ATCTGCGCAAGAAAAGATCCAGCAATTTAGATGAAC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACAGTTCATGCTTAAGTaGCACTCTGTTAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPQFMLK*HSVKVI
Trigger: TATGACTTTAACAGAGTGCCACTTAAGCATGAACTG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTAGAGACTTTACCACTTaGAAAACATCAACCACATCT +
Preference number: 4 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPRDFTT*KTSTTS
Trigger: AGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR GCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTTGTTCATCTAAATTaGTGGATCTTTTCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNVVHLN*WIFSCA
Trigger: TGCGCAAGAAAAGATCCAGCAATTTAGATGAACAAC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTTCATCTAAATTGCTaGATCTTTTCTTGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNVHLNC*IFSCAD
Trigger: ATCTGCGCAAGAAAAGATCCAGCAATTTAGATGAAC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CCA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCAGTTCATGCTTAAGTaGCACTCTGTTAAAGTCATA +
Preference number: 4 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNQFMLK*HSVKVI
Trigger: TATGACTTTAACAGAGTGCCACTTAAGCATGAACTG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp TGCAAGGCCCAGAGTGGATGGTGTAAGAGTTGTGAGGCTGGCACCTaGTGGGTCAGTCCCGCCGCCGGGAGCAGGCGTGAGTGTGGGATT +
Preference number: 5 (lower is better)
Translates to: CKAQSGWCKSCEAGT*WVSPAAGSRRECGI
Trigger: AATCCCACACTCACGCCTGCTCCCGGCGGCGGGACTGACCCACCAGGTGCCAGCCTCACAACTCTTACACCATCCACTCTGGGCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS TCA 90 bp GCTCCTCCGGCAGAGGGCGTCTGCGAGTCAGGCTGTGGGGACAGGTaGGGCAGCAGCGTGGATAACACACCATCACTGGGTGTAGGTGTT +
Preference number: 5 (lower is better)
Translates to: APPAEGVCESGCGDR*GSSVDNTPSLGVGV
Trigger: AACACCTACACCCAGTGATGGTGTGTTATCCACGCTGCTGCCTCACCTGTCCCCACAGCCTGACTCGCAGACGCCCTCTGCCGGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS TCA 90 bp GGAGCAGGCGTGAGTGTGGGATTGTCAGCTTGGCTGCTGAATGTCTaGGTGTCAGCTCCTCCGGCAGAGGGCGTCTGCGAGTCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GAGVSVGLSAWLLNV*VSAPPAEGVCESGC
Trigger: ACAGCCTGACTCGCAGACGCCCTCTGCCGGAGGAGCTGACACTCAGACATTCAGCAGCCAAGCTGACAATCCCACACTCACGCCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000195533.6
CDS CCA 90 bp GCACTATTGGTAGGCTCCGGGGTTCCCACCCCTCTGCTGTCTTCCTaGGCTTTATTCAGAGGACCATCTGGACGGACACAGTTAGCATCC +
Preference number: 5 (lower is better)
Translates to: ALLVGSGVPTPLLSS*ALFRGPSGRTQLAS
Trigger: GGATGCTAACTGTGTCCGTCCAGATGGTCCTCTGAATAAAGCCCAGGAAGACAGCAGAGGGGTGGGAACCCCGGAGCCTACCAATAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp AGGGCGTCTGCGAGTCAGGCTGTGGGGACAGGTGAGGCAGCAGCGTaGATAACACACCTGGATGATATGTGGTCTCTGAAGAGCCATTTC +
Preference number: 5 (lower is better)
Translates to: RASASQAVGTGEAAA*ITHLDDMWSLKSHF
Trigger: GAAATGGCTCTTCAGAGACCACATATCATCCAGGTGTGTTATCCACGCTGCTGCCTCACCTGTCCCCACAGCCTGACTCGCAGACGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS CCA 90 bp ACACCAGGTCTTTGGGTTCTGCAGGCAGCTCTTCCCCTTTCCATGTaGTACACTGGTACTGGTACACAGTTCTGGGCTCCTTCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: TPGLWVLQAALPLSM*YTGTGTQFWAPSSW
Trigger: CCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGCTGCCTGCAGAACCCAAAGACCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp GCAGGAATGGTCCCCGGTACAGTCCTCTCCCCTGGCACACCTGGATaGTATGTGGTCTCTGAAGAGCCATTTCCTCTTTCAGAGATGCTT +
Preference number: 5 (lower is better)
Translates to: AGMVPGTVLSPGTPG*YVVSEEPFPLSEML
Trigger: AAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCACATATCATCCAGGTGTGCCAGGGGAGAGGACTGTACCGGGGACCATTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193650.2
CDS CCA 90 bp GGTTCTGCAGGCAGCTCTTCCCCTTTCCATGTGGTACACTGGTACTaGTACACAGTTCTGGGCTCCTTCCTCTTGGAATGTCTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSAGSSSPFHVVHWY*YTVLGSFLLECLSS
Trigger: TGAGCTGAGACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGCTGCCTGCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp ACTGTGCCTCCACTTGCACCATCAGACACCTCTGTCGCCTTAGCTTaGCAACATAACCATAGACATCCACTTTGCCCTCTGCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: TVPPLAPSDTSVALA*QHNHRHPLCPLLPG
Trigger: GCCTGGAAGCAGAGGGCAAAGTGGATGTCTATGGTTATGTTGTCAAGCTAAGGCGACAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp TGCTGGGATCCATCTCTGCAGTGGACGAGGATGGATGCATGCTTGTaGTACTTCATCCCTTCTGGGGAAGCCTTGGGAAGCTTCTGTTTG +
Preference number: 5 (lower is better)
Translates to: CWDPSLQWTRMDACL*YFIPSGEALGSFCL
Trigger: CAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTATCACAAGCATGCATCCATCCTCGTCCACTGCAGAGATGGATCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 90 bp AGCCATTTCCTCTTTCAGAGATGCTTGGGGGTGTGGATTCAGTGGTaGGAGCAGGTAAGGGGTCACTTTGAGGCAGAAGAAGGGCATTCT +
Preference number: 5 (lower is better)
Translates to: SHFLFQRCLGVWIQW*EQVRGHFEAEEGHS
Trigger: AGAATGCCCTTCTTCTGCCTCAAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS GCA 90 bp CTGGATGATATGTGGTCTCTGAAGAGCCATTTCCTCTTTCAGAGATaGTTGGGGGTGTGGATTCAGTGGTGCGAGCAGGTAAGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: LDDMWSLKSHFLFQR*LGVWIQWCEQVRGH
Trigger: GTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCACATATCATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CCA 90 bp TCTTTGGGTTCTGCAGGCAGCTCTTCCCCTTTCCATGTGGTACACTaGTACTGGTACACAGTTCTGGGCTCCTTCCTCTTGGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: SLGSAGSSSPFHVVH*YWYTVLGSFLLECL
Trigger: GAGACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGCTGCCTGCAGAACCCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp AAGAGCCATTTCCTCTTTCAGAGATGCTTGGGGGTGTGGATTCAGTaGTGCGAGCAGGTAAGGGGTCACTTTGAGGCAGAAGAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: KSHFLFQRCLGVWIQ*CEQVRGHFEAEEGH
Trigger: ATGCCCTTCTTCTGCCTCAAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CCA 90 bp TGGTCTCTGAAGAGCCATTTCCTCTTTCAGAGATGCTTGGGGGTGTaGATTCAGTGGTGCGAGCAGGTAAGGGGTCACTTTGAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: WSLKSHFLFQRCLGV*IQWCEQVRGHFEAE
Trigger: TTCTGCCTCAAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS GCA 90 bp GGTGTAAGAGTTGTGAGGCTGGCACCATCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCTGTGTCCAGAAGGGCAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: GVRVVRLAPSLGVGV*PVTKTSVSRRANPK
Trigger: CTTTGGATTTGCCCTTCTGGACACAGAAGTCTTTGTCACAGGGCAAACACCTACACCCAGTGATGGTGCCAGCCTCACAACTCTTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182283.8
CDS CCA 90 bp ATGTGGTACACTGGTACTGGTACACAGTTCTGGGCTCCTTCCTCTTaGAATGTCTCAGCTCAAAAGTTCGGAGAGTGTAGGCTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: MWYTGTGTQFWAPSS*NVSAQKFGECRLRL
Trigger: GAGCCTCAGCCTACACTCTCCGAACTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp GCTCTTCCCCTTTCCATGTGGTACACTGGTACTGGTACACAGTTCTaGGCTCCTTCCTCTTGGAATGTCTCAGCTCAAAAGTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: ALPLSMWYTGTGTQF*APSSWNVSAQKFGE
Trigger: CTCTCCGAACTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGGGCTCGCAGAACCATaGGCAGCATGTTCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQGLAEP*AACSGS
Trigger: GGAACCAGAACATGCTGCCAATGGTTCTGCGAGCCC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 90 bp GGAACTGGTATTGCTCATAGCTGCACACCACCCCAGGCCGTGCTTTaGGTAGAGACTTTACCACTTGGAAAACATCAACCACATCTTCTG +
Preference number: 5 (lower is better)
Translates to: GTGIAHSCTPPQAVL*VETLPLGKHQPHLL
Trigger: CAGAAGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGGTGGTGTGCAGCTATGAGCAATACCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp GCAGTGGACGAGGATGGATGCATGCTTGTGATACTTCATCCCTTCTaGGGAAGCCTTGGGAAGCTTCTGTTTGAGGTCCTGAATCATAGA +
Preference number: 5 (lower is better)
Translates to: AVDEDGCMLVILHPF*GSLGKLLFEVLNHR
Trigger: TCTATGATTCAGGACCTCAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTATCACAAGCATGCATCCATCCTCGTCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCTCATCCCGGGGCCCTaGTGCAGCAATGTATTTCCT +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQLIPGP*CSNVFP
Trigger: AGGAAATACATTGCTGCACAAGGGCCCCGGGATGAG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTGCCTTCCTCCATGCTaGGCCAGTATTCTGCGCACT +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQCLPPC*ASILRT
Trigger: AGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGCA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGCCTTCTGGGGAAGCCTaGGGAAGCTTCTGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQPSGEA*GSFCLR
Trigger: CCTCAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGG...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 90 bp GCACATGTTTGCTTCGTTGTGGTAGCATCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCTGTGTCCAGAAGGGCAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: AHVCFVVVASLGVGV*PVTKTSVSRRANPK
Trigger: CTTTGGATTTGCCCTTCTGGACACAGAAGTCTTTGTCACAGGGCAAACACCTACACCCAGTGATGCTACCACAACGAAGCAAACATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182755.8
CDS GCA 90 bp AGGGCATTCTCTGTTGTGCTCAGTTCATCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCTGTGTCCAGAAGGGCAAATCCAAAG +
Preference number: 5 (lower is better)
Translates to: RAFSVVLSSSLGVGV*PVTKTSVSRRANPK
Trigger: CTTTGGATTTGCCCTTCTGGACACAGAAGTCTTTGTCACAGGGCAAACACCTACACCCAGTGATGAACTGAGCACAACAGAGAATGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CCA 90 bp ATGAAGGAAGTCTCTGGTATTCAGCCTCCAGAGGGGAGGGGTCACTaGGTGGATCTCTCTTCTTCATGTTGTGTAGGCATGAATGTAACT +
Preference number: 5 (lower is better)
Translates to: MKEVSGIQPPEGRGH*VDLSSSCCVGMNVT
Trigger: AGTTACATTCATGCCTACACAACATGAAGAAGAGAGATCCACCCAGTGACCCCTCCCCTCTGGAGGCTGAATACCAGAGACTTCCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp CTGCACACCACCCCAGGCCGTGCTTTGCGTAGAGACTTTACCACTTaGAAAACATCAACCACATCTTCTGTTTCTGCACTTTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: LHTTPGRALRRDFTT*KTSTTSSVSALSKR
Trigger: TCTCTTGGAAAGTGCAGAAACAGAAGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGGTGGTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 90 bp TGTCACAACAATATCTTTGAAAGCCCGAGTGCCTTCCTCCATGCTTaGCCAGTATTCTGCGCACTTGTTCCTGTTTCCTTCTTCACATCG +
Preference number: 5 (lower is better)
Translates to: CHNNIFESPSAFLHA*PVFCALVPVSFFTS
Trigger: CGATGTGAAGAAGGAAACAGGAACAAGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACTCATCCCGGGGCCCTaGTGCAGCAATGTATTTCCT +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSLIPGP*CSNVFP
Trigger: AGGAAATACATTGCTGCACAAGGGCCCCGGGATGAG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAATACTGTGCCTCCACTaGCACCATCAGACACCTCTG +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPILCLH*HHQTPL
Trigger: CAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGTAT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCAGGCTCACTCTCTTaGCTCATCTCCAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSGSLS*LISSSC
Trigger: GCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp GGAAAACATCAACCACATCTTCTGTTTCTGCACTTTCCAAGAGATTaGACAAGGCACAGAACAACCCTGTCTGCTGGGATCCATCTCTGC +
Preference number: 5 (lower is better)
Translates to: GKHQPHLLFLHFPRD*TRHRTTLSAGIHLC
Trigger: GCAGAGATGGATCCCAGCAGACAGGGTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTGCAGAAACAGAAGATGTGGTTGATGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTGGCCAGCTGGTGAATaGGATATGAGTCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQWPAGE*DMSHFS
Trigger: AGAGAAGTGACTCATATCCAATTCACCAGCTGGCCA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCATCAGGCTCACTCTCTTaGCTCATCTCCAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPSGSLS*LISSSC
Trigger: GCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTGA...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACTGGGCTCCTTCCTCTaGGAATGTCTCAGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPLGSFL*ECLSSK
Trigger: TTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCAG...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTGGCTGTTTGTTTTCTaGACTTGTCCATTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQWLFVF*TCPFWA
Trigger: CGCCCAGAATGGACAAGTCAAGAAAACAAACAGCCA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCCACACTTAGCATTTaGGACATCTTTGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSTLSI*DIFEVC
Trigger: GCAGACCTCAAAGATGTCCAAAATGCTAAGTGTGGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAGTCACAACAATATCTTaGAAAGCCCGAGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPVTTIS*KARVPS
Trigger: GGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGAC...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGTTTGTTTTCTTGACTaGTCCATTCTGGGCGGGATA +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQVCFLD*SILGGI
Trigger: TATCCCGCCCAGAATGGACAAGTCAAGAAAACAAAC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAAAATGTCAGAATGGATaGGCTCCACATCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPKCQNG*APHPSA
Trigger: AGCTGATGGATGTGGAGCCAATCCATTCTGACATTT...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAATAACTGTGGCCTTTaGCTCCCAGATCATCCTCCA +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSNNCGL*LPDHPP
Trigger: TGGAGGATGATCTGGGAGCAAAAGGCCACAGTTATT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGTCACAACAATATCTTaGAAAGCCCGAGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSVTTIS*KARVPS
Trigger: GGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGAC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACCTTCTGGGGAAGCCTaGGGAAGCTTCTGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPPSGEA*GSFCLR
Trigger: CCTCAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAGCACTTTCCAAGAGATaGAACAAGGCACAGAACAAC +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPALSKR*NKAQNN
Trigger: GTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTGC...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGGCTGTTTGTTTTCTaGACTTGTCCATTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSWLFVF*TCPFWA
Trigger: CGCCCAGAATGGACAAGTCAAGAAAACAAACAGCCA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCACAGTTAGCATCCTGCTaGCCTCCATCCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSQLASC*PPSTSL
Trigger: TAATGAAGTGGATGGAGGCAAGCAGGATGCTAACTG...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CATAAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCAGCATTTTGGACATCTTaGAGGTCTGCCTTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: HKSHMLILFTSQISCTHPAFWTS*RSALKV
Trigger: GACTTTTAAGGCAGACCTCAAAGATGTCCAAAATGC...TGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATCCACACTTAGCATTTaGGACATCTTTGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSSTLSI*DIFEVC
Trigger: GCAGACCTCAAAGATGTCCAAAATGCTAAGTGTGGA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGAGCAGTCCCATTTCTTaGAATCTTCCCATTGACATA +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSSPIS*NLPIDI
Trigger: TATGTCAATGGGAAGATTCAAAGAAATGGGACTGCT...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAAATGTCAGAATGGATaGGCTCCACATCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSKCQNG*APHPSA
Trigger: AGCTGATGGATGTGGAGCCAATCCATTCTGACATTT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTGCCTTCCTCCATGCTaGGCCAGTATTCTGCGCACT +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNCLPPC*ASILRT
Trigger: AGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGCA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGTCTCTCTTCTTCATGTaGTGTAGGCATGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQSLFFM*CRHECN
Trigger: GTTACATTCATGCCTACACAACATGAAGAAGAGAGA...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCCTTCTGGGGAAGCCTaGGGAAGCTTCTGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNPSGEA*GSFCLR
Trigger: CCTCAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTCTGTGGTGCTGACATaGGAGGTGTGTGTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPSVVLT*EVCVGE
Trigger: CTCACCTACACACACCTCCAATGTCAGCACCACAGA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAGGACCACTGAAGAAGTaGCTAAAAGCATTAACTCTC +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSGPLKK*LKALTL
Trigger: GAGAGTTAATGCTTTTAGCAACTTCTTCAGTGGTCC...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATATACTGTGCCTCCACTaGCACCATCAGACACCTCTG +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNILCLH*HHQTPL
Trigger: CAGAGGTGTCTGATGGTGCAAGTGGAGGCACAGTAT...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp AAGTCTCACATGTTGATTTTGTTCACGTCCCAGATCAGCTGTACACACCCACAGGATGCATTAATGTATTaGCTGGTTTCTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: KSHMLILFTSQISCTHPQDALMY*LVSSES
Trigger: TGACTCAGAAGAAACCAGCAAATACATTAATGCATC...CTGTGGGTGTGTACAGCTGATCTGGGACGTGAACAAAATCAACATGTGAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCACTGGGCTCCTTCCTCTaGGAATGTCTCAGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPLGSFL*ECLSSK
Trigger: TTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCAG...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGAAGGGCATTCTCTGTaGTGCTCAGTTCATCACTGG +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPEGHSL*CSVHHW
Trigger: CCAGTGATGAACTGAGCACAACAGAGAATGCCCTTC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATCTCTTTCAGAGATGCTaGGGGGTGTGGATTCAGTGG +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNLFQRC*GVWIQW
Trigger: CCACTGAATCCACACCCCCAAGCATCTCTGAAAGAG...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTGTGGGATTGTCAGCTaGGCTGCTGAATGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPCGIVS*AAECLS
Trigger: ACTCAGACATTCAGCAGCCAAGCTGACAATCCCACA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS GCA 90 bp GACTCATCTGATTCAGGCTCACTCTCTTTGCTCATCTCCAGTTCATaGTTAAGTGGCACTCTGTTAAAGTCATATGGAACAACATTAGAA +
Preference number: 5 (lower is better)
Translates to: DSSDSGSLSLLISSS*LSGTLLKSYGTTLE
Trigger: TTCTAATGTTGTTCCATATGACTTTAACAGAGTGCCACTTAAGCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTGAATCAGATGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCAAGCAGTCCCATTTCTTaGAATCTTCCCATTGACATA +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSSSPIS*NLPIDI
Trigger: TATGTCAATGGGAAGATTCAAAGAAATGGGACTGCT...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp CTCCAATCACATTTAGATGTCATACACACGCACAAACATGCACACACACAGTCATGTTGTTCATCTAAATaGCTGGATCTTTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: LQSHLDVIHTHKHAHTQSCCSSK*LDLFLR
Trigger: GCGCAAGAAAAGATCCAGCAATTTAGATGAACAACA...TGACTGTGTGTGTGCATGTTTGTGCGTGTGTATGACATCTAAATGTGATTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTAATAACTGTGGCCTTTaGCTCCCAGATCATCCTCCA +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPNNCGL*LPDHPP
Trigger: TGGAGGATGATCTGGGAGCAAAAGGCCACAGTTATT...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAGTCACAACAATATCTTaGAAAGCCCGAGTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPVTTIS*KARVPS
Trigger: GGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGAC...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTGGCCAGCTGGTGAATaGGATATGAGTCACTTCTCT +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPWPAGE*DMSHFS
Trigger: AGAGAAGTGACTCATATCCAATTCACCAGCTGGCCA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTCAGGCTCACTCTCTTaGCTCATCTCCAGTTCATGC +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNSGSLS*LISSSC
Trigger: GCATGAACTGGAGATGAGCAAAGAGAGTGAGCCTGA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTCAGTTAGCATCCTGCTaGCCTCCATCCACTTCATTA +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPQLASC*PPSTSL
Trigger: TAATGAAGTGGATGGAGGCAAGCAGGATGCTAACTG...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAAAATGTCAGAATGGATaGGCTCCACATCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPKCQNG*APHPSA
Trigger: AGCTGATGGATGTGGAGCCAATCCATTCTGACATTT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGCACTTTCCAAGAGATaGAACAAGGCACAGAACAAC +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPALSKR*NKAQNN
Trigger: GTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTGC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGTTTGTTTTCTTGACTaGTCCATTCTGGGCGGGATA +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPVCFLD*SILGGI
Trigger: TATCCCGCCCAGAATGGACAAGTCAAGAAAACAAAC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCAACATGTGTAATTTGTTaGGGCACGAAGGTTGTCCAA +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPTCVIC*GTKVVQ
Trigger: TTGGACAACCTTCGTGCCCAAACAAATTACACATGT...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp GAAAATTGCACTTCTCAGCAGTCCCATTTCTTTGAATCTTCCCATTaGCATAGGCAAGTAGGGACACTTCATAGTATTTATAAGGTTTCA +
Preference number: 5 (lower is better)
Translates to: ENCTSQQSHFFESSH*HRQVGTLHSIYKVS
Trigger: TGAAACCTTATAAATACTATGAAGTGTCCCTACTTGCCTATGTCAATGGGAAGATTCAAAGAAATGGGACTGCTGAGAAGTGCAATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGCATTTTGGACATCTTaGAGGTCTGCCTTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNAFWTS*RSALKV
Trigger: GACTTTTAAGGCAGACCTCAAAGATGTCCAAAATGC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTTGTTGTTCATCTAAATaGCTGGATCTTTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPCCSSK*LDLFLR
Trigger: GCGCAAGAAAAGATCCAGCAATTTAGATGAACAACA...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATGGACCACTGAAGAAGTaGCTAAAAGCATTAACTCTC +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNGPLKK*LKALTL
Trigger: GAGAGTTAATGCTTTTAGCAACTTCTTCAGTGGTCC...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp TTCATTAGGTCTAGAAAAATAGAAAGAACTAATGTGAGAGTCTGCGTTGTCCCATCTCTCTTCTTCATGTaGTGTAGGCATGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: FIRSRKIERTNVRVCVVPSLFFM*CRHECN
Trigger: GTTACATTCATGCCTACACAACATGAAGAAGAGAGA...TGGGACAACGCAGACTCTCACATTAGTTCTTTCTATTTTTCTAGACCTAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTGTTGTTCATCTAAATaGCTGGATCTTTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNCCSSK*LDLFLR
Trigger: GCGCAAGAAAAGATCCAGCAATTTAGATGAACAACA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACCACTGCACAGCCATGTTCTTTCATTAGGTCTAGAAAAATAGAAAGAACTAATTCTCTCTTCTTCATGTaGTGTAGGCATGAATGTAAC +
Preference number: 5 (lower is better)
Translates to: TTAQPCSFIRSRKIERTNSLFFM*CRHECN
Trigger: GTTACATTCATGCCTACACAACATGAAGAAGAGAGA...ATTAGTTCTTTCTATTTTTCTAGACCTAATGAAAGAACATGGCTGTGCAGTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS-3UTR CAA 90 bp ACTGTACGAGGTTACCTATGTAAATATTCAGTACAAACAAGTTTTCATGCCCCTGATGCATTAATGTATTaGCTGGTTTCTTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: TVRGYLCKYSVQTSFHAPDALMY*LVSSES
Trigger: TGACTCAGAAGAAACCAGCAAATACATTAATGCATC...AGGGGCATGAAAACTTGTTTGTACTGAATATTTACATAGGTAACCTCGTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 90 bp CTCGTACACTCCATTGTGAAAAGAGACCAGAAACTCATAGTCAGTTaGATAGTAGAGATTATCTACATAAAACTGACAGTTTGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: LVHSIVKRDQKLIVS*IVEIIYIKLTVCLV
Trigger: AACAAGACAAACTGTCAGTTTTATGTAGATAATCTCTACTATTCAACTGACTATGAGTTTCTGGTCTCTTTTCACAATGGAGTGTACGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp CAGAGTGGATGGTGTAAGAGTTGTGAGGCTGGCACCTaGTGGGTCAGTCCCGCCGCCGGGAGCAGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: QSGWCKSCEAGT*WVSPAAGSRRE
Trigger: CTCACGCCTGCTCCCGGCGGCGGGACTGACCCACCAGGTGCCAGCCTCACAACTCTTACACCATCCACTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS CCA 72 bp AGTGGATGGTGTAAGAGTTGTGAGGCTGGCACCTGGTaGGTCAGTCCCGCCGCCGGGAGCAGGCGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: SGWCKSCEAGTW*VSPAAGSRREC
Trigger: ACACTCACGCCTGCTCCCGGCGGCGGGACTGACCCACCAGGTGCCAGCCTCACAACTCTTACACCATCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS TCA 72 bp GCAGAGGGCGTCTGCGAGTCAGGCTGTGGGGACAGGTaGGGCAGCAGCGTGGATAACACACCATCACTGGGT +
Preference number: 6 (lower is better)
Translates to: AEGVCESGCGDR*GSSVDNTPSLG
Trigger: ACCCAGTGATGGTGTGTTATCCACGCTGCTGCCTCACCTGTCCCCACAGCCTGACTCGCAGACGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS TCA 72 bp GTGAGTGTGGGATTGTCAGCTTGGCTGCTGAATGTCTaGGTGTCAGCTCCTCCGGCAGAGGGCGTCTGCGAG +
Preference number: 6 (lower is better)
Translates to: VSVGLSAWLLNV*VSAPPAEGVCE
Trigger: CTCGCAGACGCCCTCTGCCGGAGGAGCTGACACTCAGACATTCAGCAGCCAAGCTGACAATCCCACACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000195533.6
CDS CCA 72 bp GTAGGCTCCGGGGTTCCCACCCCTCTGCTGTCTTCCTaGGCTTTATTCAGAGGACCATCTGGACGGACACAG +
Preference number: 6 (lower is better)
Translates to: VGSGVPTPLLSS*ALFRGPSGRTQ
Trigger: CTGTGTCCGTCCAGATGGTCCTCTGAATAAAGCCCAGGAAGACAGCAGAGGGGTGGGAACCCCGGAGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp GCTTGGAGGGTCAGTGCTTGCAAGGCCCAGAGTGGATaGTGTAAGAGTTGTGAGGCTGGCACCTGGTGGGTC +
Preference number: 6 (lower is better)
Translates to: AWRVSACKAQSG*CKSCEAGTWWV
Trigger: GACCCACCAGGTGCCAGCCTCACAACTCTTACACCATCCACTCTGGGCCTTGCAAGCACTGACCCTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195533.6
CDS CCA 72 bp GCGAGTCAGGCTGTGGGGACAGGTGAGGCAGCAGCGTaGATAACACACCTGGATGATATGTGGTCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: ASQAVGTGEAAA*ITHLDDMWSLK
Trigger: CTTCAGAGACCACATATCATCCAGGTGTGTTATCCACGCTGCTGCCTCACCTGTCCCCACAGCCTGACTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS TCA 72 bp CCTCTCCCCTGGCACACCTGGATGATATGTGGTCTCTaGAGAGCCATTTCCTCTTTCAGAGATGCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PLPWHTWMICGL*RAISSFRDAWG
Trigger: CCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCACATATCATCCAGGTGTGCCAGGGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193650.2
CDS TCA 72 bp GTCCCCGGTACAGTCCTCTCCCCTGGCACACCTGGATaGTATGTGGTCTCTGAAGAGCCATTTCCTCTTTCA +
Preference number: 6 (lower is better)
Translates to: VPGTVLSPGTPG*YVVSEEPFPLS
Trigger: TGAAAGAGGAAATGGCTCTTCAGAGACCACATATCATCCAGGTGTGCCAGGGGAGAGGACTGTACCGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193650.2
CDS GCA 72 bp GTTGTGAGGCTGGCACCATCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCTGTGTCCAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: VVRLAPSLGVGV*PVTKTSVSRRA
Trigger: TGCCCTTCTGGACACAGAAGTCTTTGTCACAGGGCAAACACCTACACCCAGTGATGGTGCCAGCCTCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182283.8
CDS CCA 72 bp GTCTCTGGTATTCAGCCTCCAGAGGGGAGGGGTCACTaGGTGGATCTCTCTTCTTCATGTTGTGTAGGCATG +
Preference number: 6 (lower is better)
Translates to: VSGIQPPEGRGH*VDLSSSCCVGM
Trigger: CATGCCTACACAACATGAAGAAGAGAGATCCACCCAGTGACCCCTCCCCTCTGGAGGCTGAATACCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp TCTGCAGGCAGCTCTTCCCCTTTCCATGTGGTACACTaGTACTGGTACACAGTTCTGGGCTCCTTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: SAGSSSPFHVVH*YWYTVLGSFLL
Trigger: CAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGCTGCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp CCTCCAGAAGTCATCAACTGTCTCATCCCGGGGCCCTaGTGCAGCAATGTATTTCCTGGGTTCCTTGAAGCC +
Preference number: 6 (lower is better)
Translates to: PPEVINCLIPGP*CSNVFPGFLEA
Trigger: GGCTTCAAGGAACCCAGGAAATACATTGCTGCACAAGGGCCCCGGGATGAGACAGTTGATGACTTCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp AGCCCGAGTGCCTTCCTCCATGCTTGGCCAGTATTCTaGGCACTTGTTCCTGTTTCCTTCTTCACATCGTGT +
Preference number: 6 (lower is better)
Translates to: SPSAFLHAWPVF*ALVPVSFFTSC
Trigger: ACACGATGTGAAGAAGGAAACAGGAACAAGTGCGCAGAATACTGGCCAAGCATGGAGGAAGGCACTCGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp GAGGTCCTGAATCATAGACACCAGGTCTTTGGGTTCTaGAGGCAGCTCTTCCCCTTTCCATGTGGTACACTG +
Preference number: 6 (lower is better)
Translates to: EVLNHRHQVFGF*RQLFPFPCGTL
Trigger: CAGTGTACCACATGGAAAGGGGAAGAGCTGCCTGCAGAACCCAAAGACCTGGTGTCTATGATTCAGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp AGGCACAGAACAACCCTGTCTGCTGGGATCCATCTCTaGAGTGGACGAGGATGGATGCATGCTTGTGATACT +
Preference number: 6 (lower is better)
Translates to: RHRTTLSAGIHL*SGRGWMHACDT
Trigger: AGTATCACAAGCATGCATCCATCCTCGTCCACTGCAGAGATGGATCCCAGCAGACAGGGTTGTTCTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp CTCTTTCAGAGATGCTTGGGGGTGTGGATTCAGTGGTaGGAGCAGGTAAGGGGTCACTTTGAGGCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LFQRCLGVWIQW*EQVRGHFEAEE
Trigger: TTCTTCTGCCTCAAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CCA 72 bp GGCAGCTCTTCCCCTTTCCATGTGGTACACTGGTACTaGTACACAGTTCTGGGCTCCTTCCTCTTGGAATGT +
Preference number: 6 (lower is better)
Translates to: GSSSPFHVVHWY*YTVLGSFLLEC
Trigger: ACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGTGTACCACATGGAAAGGGGAAGAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp TTCCTCTTTCAGAGATGCTTGGGGGTGTGGATTCAGTaGTGCGAGCAGGTAAGGGGTCACTTTGAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: FLFQRCLGVWIQ*CEQVRGHFEAE
Trigger: TTCTGCCTCAAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS TCA 72 bp CAGAGTGGATGGTGTAAGAGTTGTGAGGCTGGCACCTaGAGAGATATCTGTGGTGCTGACATTGGAGGTGTG +
Preference number: 6 (lower is better)
Translates to: QSGWCKSCEAGT*RDICGADIGGV
Trigger: CACACCTCCAATGTCAGCACCACAGATATCTCTTCAGGTGCCAGCCTCACAACTCTTACACCATCCACTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183301.8
CDS GCA 72 bp TGCTTCGTTGTGGTAGCATCACTGGGTGTAGGTGTTTaGCCTGTGACAAAGACTTCTGTGTCCAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: CFVVVASLGVGV*PVTKTSVSRRA
Trigger: TGCCCTTCTGGACACAGAAGTCTTTGTCACAGGGCAAACACCTACACCCAGTGATGCTACCACAACGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182755.8
CDS GCA 72 bp ATGTGGTCTCTGAAGAGCCATTTCCTCTTTCAGAGATaGTTGGGGGTGTGGATTCAGTGGTGCGAGCAGGTA +
Preference number: 6 (lower is better)
Translates to: MWSLKSHFLFQR*LGVWIQWCEQV
Trigger: TACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CCA 72 bp GAGGATGGATGCATGCTTGTGATACTTCATCCCTTCTaGGGAAGCCTTGGGAAGCTTCTGTTTGAGGTCCTG +
Preference number: 6 (lower is better)
Translates to: EDGCMLVILHPF*GSLGKLLFEVL
Trigger: CAGGACCTCAAACAGAAGCTTCCCAAGGCTTCCCCAGAAGGGATGAAGTATCACAAGCATGCATCCATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp AAGAGATTGAACAAGGCACAGAACAACCCTGTCTGCTaGGATCCATCTCTGCAGTGGACGAGGATGGATGCA +
Preference number: 6 (lower is better)
Translates to: KRLNKAQNNPVC*DPSLQWTRMDA
Trigger: TGCATCCATCCTCGTCCACTGCAGAGATGGATCCCAGCAGACAGGGTTGTTCTGTGCCTTGTTCAATCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp AAGAGCCATTTCCTCTTTCAGAGATGCTTGGGGGTGTaGATTCAGTGGTGCGAGCAGGTAAGGGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: KSHFLFQRCLGV*IQWCEQVRGHF
Trigger: AAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS CAA 72 bp ATAGATGCTGGCGATGATGTCATAGAGGAACTGGTATaGCTCATAGCTGCACACCACCCCAGGCCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: IDAGDDVIEELV*LIAAHHPRPCF
Trigger: AAAGCACGGCCTGGGGTGGTGTGCAGCTATGAGCAATACCAGTTCCTCTATGACATCATCGCCAGCATCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp TATGAACTCTGGGTTGGAGCTGGGCTCGCAGAACCATaGGCAGCATGTTCTGGTTCCTCAGCACTATTGGTA +
Preference number: 6 (lower is better)
Translates to: YELWVGAGLAEP*AACSGSSALLV
Trigger: TACCAATAGTGCTGAGGAACCAGAACATGCTGCCAATGGTTCTGCGAGCCCAGCTCCAACCCAGAGTTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 90 bp GATGATATGTGGTCTCTGAAGAGCCATTTCCTCTTTCAGAGATGCTaGGGGGTGTGGATTCAGTGGTGCGAGCAGGTAAGGGGTCACTTT +
Preference number: 6 (lower is better)
Translates to: DDMWSLKSHFLFQRC*GVWIQWCEQVRGHF
Trigger: AAAGTGACCCCTTACCTGCTCGCACCACTGAATCCACACCCCCAAGCATCTCTGAAAGAGGAAATGGCTCTTCAGAGACCACATATCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183301.8
ENSMUST00000193650.2
CDS TCA 72 bp CCACTTGCACCATCAGACACCTCTGTCGCCTTAGCTTaGCAACATAACCATAGACATCCACTTTGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: PLAPSDTSVALA*QHNHRHPLCPL
Trigger: CAGAGGGCAAAGTGGATGTCTATGGTTATGTTGTCAAGCTAAGGCGACAGAGGTGTCTGATGGTGCAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp ATTGCTCATAGCTGCACACCACCCCAGGCCGTGCTTTaGGTAGAGACTTTACCACTTGGAAAACATCAACCA +
Preference number: 6 (lower is better)
Translates to: IAHSCTPPQAVL*VETLPLGKHQP
Trigger: TGGTTGATGTTTTCCAAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGGTGGTGTGCAGCTATGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp TCGGGCATCTTTGATGGGAAACTTGCTGAATACCCGTaGAATGCTCTGAAATTCAGCCAGGAACAGTCTGCC +
Preference number: 6 (lower is better)
Translates to: SGIFDGKLAEYP*NALKFSQEQSA
Trigger: GGCAGACTGTTCCTGGCTGAATTTCAGAGCATTCCACGGGTATTCAGCAAGTTTCCCATCAAAGATGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp ACTGGTACTGGTACACAGTTCTGGGCTCCTTCCTCTTaGAATGTCTCAGCTCAAAAGTTCGGAGAGTGTAGG +
Preference number: 6 (lower is better)
Translates to: TGTGTQFWAPSS*NVSAQKFGECR
Trigger: CCTACACTCTCCGAACTTTTGAGCTGAGACATTCCAAGAGGAAGGAGCCCAGAACTGTGTACCAGTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 90 bp GCCTCCAGAGGGGAGGGGTCACTGGGTGGATCTCTCTTCTTCATGTaGTGTAGGCATGAATGTAACTCAGACAAGTTCACTTCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ASRGEGSLGGSLFFM*CRHECNSDKFTSVS
Trigger: AGAAACAGAAGTGAACTTGTCTGAGTTACATTCATGCCTACACAACATGAAGAAGAGAGATCCACCCAGTGACCCCTCCCCTCTGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 72 bp TTGATTTCCAATGTGCTGTGTCCTCCAACTCCTGTATaGAGGAAGTCTCTGGTATTCAGCCTCCAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: LISNVLCPPTPV*RKSLVFSLQRG
Trigger: TCCCCTCTGGAGGCTGAATACCAGAGACTTCCTTCATACAGGAGTTGGAGGACACAGCACATTGGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp GCACTGCAGTGCACCACAATGGGACCACTGAAGAAGTaGCTAAAAGCATTAACTCTCCGTCGAAGTTTGAGG +
Preference number: 6 (lower is better)
Translates to: ALQCTTMGPLKK*LKALTLRRSLR
Trigger: CCTCAAACTTCGACGGAGAGTTAATGCTTTTAGCAACTTCTTCAGTGGTCCCATTGTGGTGCACTGCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp GGGGAGGGGTCACTGGGTGGATCTCTCTTCTTCATGTaGTGTAGGCATGAATGTAACTCAGACAAGTTCACT +
Preference number: 6 (lower is better)
Translates to: GEGSLGGSLFFM*CRHECNSDKFT
Trigger: AGTGAACTTGTCTGAGTTACATTCATGCCTACACAACATGAAGAAGAGAGATCCACCCAGTGACCCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 72 bp CAACCACATCTTCTGTTTCTGCACTTTCCAAGAGATTaGACAAGGCACAGAACAACCCTGTCTGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: QPHLLFLHFPRD*TRHRTTLSAGI
Trigger: GATCCCAGCAGACAGGGTTGTTCTGTGCCTTGTTCAATCTCTTGGAAAGTGCAGAAACAGAAGATGTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CCA 72 bp ACCCCAGGCCGTGCTTTGCGTAGAGACTTTACCACTTaGAAAACATCAACCACATCTTCTGTTTCTGCACTT +
Preference number: 6 (lower is better)
Translates to: TPGRALRRDFTT*KTSTTSSVSAL
Trigger: AAGTGCAGAAACAGAAGATGTGGTTGATGTTTTCCAAGTGGTAAAGTCTCTACGCAAAGCACGGCCTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp CATCGTTTGTGGTCATTGATTGTCACAACAATATCTTaGAAAGCCCGAGTGCCTTCCTCCATGCTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: HRLWSLIVTTIS*KARVPSSMLGQ
Trigger: CTGGCCAAGCATGGAGGAAGGCACTCGGGCTTTCAAAGATATTGTTGTGACAATCAATGACCACAAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS GCA 72 bp TTCACAGTAATGTTCCCAAACATGGCAGCACATGTTTaGTTCGTTGTGGTAGCATCACTGGGTGTAGGTGTT +
Preference number: 6 (lower is better)
Translates to: FTVMFPNMAAHV*FVVVASLGVGV
Trigger: AACACCTACACCCAGTGATGCTACCACAACGAAGCAAACATGTGCTGCCATGTTTGGGAACATTACTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182755.8
CDS CCA 72 bp TGCAGCTGGATCCCCACAACTAGGCTTAGGCGTTTCTaGAATCCCCAAATCTGTCTGCACATTTATAACATT +
Preference number: 6 (lower is better)
Translates to: CSWIPTTRLRRF*NPQICLHIYNI
Trigger: AATGTTATAAATGTGCAGACAGATTTGGGGATTCCAGAAACGCCTAAGCCTAGTTGTGGGGATCCAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS TCA 72 bp ACTTCTCAGCAGTCCCATTTCTTTGAATCTTCCCATTaGCATAGGCAAGTAGGGACACTTCATAGTATTTAT +
Preference number: 6 (lower is better)
Translates to: TSQQSHFFESSH*HRQVGTLHSIY
Trigger: ATAAATACTATGAAGTGTCCCTACTTGCCTATGTCAATGGGAAGATTCAAAGAAATGGGACTGCTGAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 90 bp CCTCGTACACTCCATTGTGAAAAGAGACCAGAAACTCATAGTCAGTaGAATAGTAGAGATTATCTACATAAAACTGACAGTTTGTCTTGT +
Preference number: 6 (lower is better)
Translates to: PRTLHCEKRPETHSQ*NSRDYLHKTDSLSC
Trigger: ACAAGACAAACTGTCAGTTTTATGTAGATAATCTCTACTATTCAACTGACTATGAGTTTCTGGTCTCTTTTCACAATGGAGTGTACGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8
CDS CAA 72 bp CTCCATTGTGAAAAGAGACCAGAAACTCATAGTCAGTaGAATAGTAGAGATTATCTACATAAAACTGACAGT +
Preference number: 6 (lower is better)
Translates to: LHCEKRPETHSQ*NSRDYLHKTDS
Trigger: ACTGTCAGTTTTATGTAGATAATCTCTACTATTCAACTGACTATGAGTTTCTGGTCTCTTTTCACAATGGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182283.8
ENSMUST00000182755.8
ENSMUST00000183301.8