Pregenerated sensors for PTPN9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032290Ensembl transcript IDs: ENSMUST00000034832.8, ENSMUST00000216034.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACATGTaGGCTGGGAGACACAGGAAAGAGGTTGATCCATGGCTTCAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: PHLSSQRERLPCVHM*AGRHRKEVDPWLQH Trigger: ATGCTGAAGCCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR GCA 90 bp | GTGGCAAGTTCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTaGGTGCACATGTGCGCTGGGAGACACAGGAAAGAGGTTGATCCA | + |
|
Preference number: 1 (lower is better) Translates to: VASSPHLSSQRERLP*VHMCAGRHRKEVDP Trigger: TGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGAACTTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR TCA 90 bp | CAGACTGGGAAAAGACAGGAACAAGTTGTACGGGCAGTGGACCAGTaGTTCCAAGGAACGGACTCATGCAGCCAAAGGGATTATGCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: QTGKRQEQVVRAVDQ*FQGTDSCSQRDYAS Trigger: TGAAGCATAATCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACAACTTGTTCCTGTCTTTTCCCAGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 90 bp | AACACAGTGTTGGGAACTCTTGATTCCATTCCTGGCGAATCAGACTaGGAAAAGACAGGAACAAGTTGTACGGGCAGTGGACCAGTGATT | + |
|
Preference number: 1 (lower is better) Translates to: NTVLGTLDSIPGESD*EKTGTSCTGSGPVI Trigger: AATCACTGGTCCACTGCCCGTACAACTTGTTCCTGTCTTTTCCCAGTCTGATTCGCCAGGAATGGAATCAAGAGTTCCCAACACTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 90 bp | TATAAACGTGCTTGGCACTCGGGACATTCTCTAGAATATGTAACTTaGTCAAGCTTTCTGGGTAGGAAGGTGAATGCTCACCAGACCTCC | + |
|
Preference number: 1 (lower is better) Translates to: YKRAWHSGHSLEYVT*SSFLGRKVNAHQTS Trigger: GGAGGTCTGGTGAGCATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCCCGAGTGCCAAGCACGTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 90 bp | AATGACAGAAAAGACTGGAATACACGCCCTATGTATAAACGTGCTTaGCACTCGGGACATTCTCTAGAATATGTAACTTGGTCAAGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: NDRKDWNTRPMYKRA*HSGHSLEYVTWSSF Trigger: AAAGCTTGACCAAGTTACATATTCTAGAGAATGTCCCGAGTGCCAAGCACGTTTATACATAGGGCGTGTATTCCAGTCTTTTCTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 90 bp | AGACCCACCCAGTTTATGTTTTATAAAGACATAGGCCCACCCAGTTaGCAGTCTAGGATCTGGCAGGCTAGCAGGCAGGGAGAGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RPTQFMFYKDIGPPS*QSRIWQASRQGELG Trigger: GCCCAGCTCTCCCTGCCTGCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAACATAAACTGGGTGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGAAAGGCTGCCTTGCGTaGACATGTGCGCTGGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRKGCLA*TCALGD Trigger: GTCTCCCAGCGCACATGTGCACGCAAGGCAGCCTTT...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGCCTTGCGTGCACATGTaGGCTGGGAGACACAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRPCVHM*AGRHRK Trigger: TTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGG...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGCGTGCACATGTGCGCTaGGAGACACAGGAAAGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRRAHVR*ETQERG Trigger: ACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACG...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACAGGGAAAGGCTGCCTTaGGTGCACATGTGCGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAPTSIESRGKIFIKEEDRERLP*VHMCAG Trigger: CCCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCT...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGAGATTACTTTGGACTCTaGCAGCTCTGTAAATTTATT | + |
|
Preference number: 2 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGDYFGL*QLCKFI Trigger: AATAAATTTACAGAGCTGCCAGAGTCCAAAGTAATC...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 90 bp | CCGATTACTTTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTaGGTCCCCATCAATGGGGTCATAAGACAGAGTCTGGAATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: PITLDSGSSVNLFLA*VPINGVIRQSLESQ Trigger: CTGTGATTCCAGACTCTGTCTTATGACCCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAAAGTAATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAATTCTGGGTAGGAAGGTaGATGCTCACCAGACCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKFWVGR*MLTRPP Trigger: GGGAGGTCTGGTGAGCATTCACCTTCCTACCCAGAA...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTTATAAAGACATAGGCCCACCCAGTTTGCAGTCTAGGATCTGGCAGGCTAGCACACCCATGCTAAATTaGACCAGTGTTACCATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FYKDIGPPSLQSRIWQASTPMLN*TSVTIS Trigger: ACTTATGGTAACACTGGTTCAATTTAGCATGGGTGT...GCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCAGAACACATTGCTGCTaGCCCTTTCTAGTGGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: DKEELHKERCLPTQEKEARTHCC*PFLVAS Trigger: ACTTGCCACTAGAAAGGGCCAGCAGCAATGTGTTCT...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACTGGCTTCAGCATAACTaGTGGCAACCTATAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LAPTSIESRGKIFIKEEDWLQHN*WQPIGS Trigger: TGAGCCTATAGGTTGCCATCAGTTATGCTGAAGCCA...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACTTAAGAACACATTGCTaGTGGCCCTTTCTAGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LAPTSIESRGKIFIKEEDLRTHC*WPFLVA Trigger: TGCCACTAGAAAGGGCCAGCAGCAATGTGTTCTTAA...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATTTACCTCAGGGACCCTaGCAAAAATCAATAGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNLPQGP*QKSIAT Trigger: TGTGGCTATTGATTTTTGCCAGGGTCCCTGAGGTAA...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCTAGAATATGTAACTTaGTCAAGCTTTCTGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: ELHKERCLPTQEKEAPVCLEYVT*SSFLGR Trigger: CCTACCCAGAAAGCTTGACCAAGTTACATATTCTAG...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAACAAGGAATGCTGAACTaGAACATAAATCCCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKQGMLN*NINPQR Trigger: TCTCTGGGGATTTATGTTGCAGTTCAGCATTCCTTG...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGATGTATAAACGTGCTTaGCACTCGGGACATTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ELQHKSPETSTKSICVYMMYKRA*HSGHSL Trigger: TAGAGAATGTCCCGAGTGCCAAGCACGTTTATACAT...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGAATGACAGAAAAGACTaGAATACACGCCCTATGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ELQHKSPETSTKSICVYMNDRKD*NTRPMY Trigger: ATACATAGGGCGTGTATTCCAGTCTTTTCTGTCATT...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR GCA 72 bp | TCTAGCCAAAGGGAAAGGCTGCCTTGCGTGCACATGTaGGCTGGGAGACACAGGAAAGAGGTTGATCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSQRERLPCVHM*AGRHRKEVDPW Trigger: CCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTATAAAGACATAGGCCCACCCAGTTTGCAGTCTAGGATCTGGCAGGCTAGCAAGGGAAAGGCTGCCTaGCGTGCACATGTGCGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FYKDIGPPSLQSRIWQASKGKAA*RAHVRW Trigger: CCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCTT...GCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR GCA 72 bp | TCACCACATTTATCTAGCCAAAGGGAAAGGCTGCCTTaGGTGCACATGTGCGCTGGGAGACACAGGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPHLSSQRERLP*VHMCAGRHRKE Trigger: CTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGGCAGCCTTTCCCTTTGGCTAGATAAATGTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGAGACACAGGAAAGAGGTaGATCCATGGCTTCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGDTGKR*IHGFSI Trigger: TATGCTGAAGCCATGGATCAACCTCTTTCCTGTGTC...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR TCA 72 bp | AAAAGACAGGAACAAGTTGTACGGGCAGTGGACCAGTaGTTCCAAGGAACGGACTCATGCAGCCAAAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KRQEQVVRAVDQ*FQGTDSCSQRD Trigger: ATCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACAACTTGTTCCTGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 72 bp | TTGGGAACTCTTGATTCCATTCCTGGCGAATCAGACTaGGAAAAGACAGGAACAAGTTGTACGGGCAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LGTLDSIPGESD*EKTGTSCTGSG Trigger: TCCACTGCCCGTACAACTTGTTCCTGTCTTTTCCCAGTCTGATTCGCCAGGAATGGAATCAAGAGTTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR TCA 72 bp | TGTAGGGTTTTGTGGGAACACAGTGTTGGGAACTCTTaGTTCCATTCCTGGCGAATCAGACTGGGAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CRVLWEHSVGNS*FHSWRIRLGKD Trigger: GTCTTTTCCCAGTCTGATTCGCCAGGAATGGAATCAAGAGTTCCCAACACTGTGTTCCCACAAAACCCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 72 bp | GCTTGGCACTCGGGACATTCTCTAGAATATGTAACTTaGTCAAGCTTTCTGGGTAGGAAGGTGAATGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AWHSGHSLEYVT*SSFLGRKVNAH Trigger: GTGAGCATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCCCGAGTGCCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 72 bp | ATCAATGGGGTCATAAGACAGAGTCTGGAATCACAGTaGAGGTCTGTTCCCCAAATCAGCAAAGACAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: INGVIRQSLESQ*RSVPQISKDNR Trigger: TCTGTTGTCTTTGCTGATTTGGGGAACAGACCTCCACTGTGATTCCAGACTCTGTCTTATGACCCCATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGAATTTATTTCTAGCCTaGGTCCCCATCAATGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQNLFLA*VPINGV Trigger: GACCCCATTGATGGGGACCAAGGCTAGAAATAAATT...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CCA 72 bp | AAAGACTGGAATACACGCCCTATGTATAAACGTGCTTaGCACTCGGGACATTCTCTAGAATATGTAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KDWNTRPMYKRA*HSGHSLEYVTW Trigger: CCAAGTTACATATTCTAGAGAATGTCCCGAGTGCCAAGCACGTTTATACATAGGGCGTGTATTCCAGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATGGAATTAAGAACACATaGCTGCTGGCCCTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNGIKNT*LLALSS Trigger: ACTAGAAAGGGCCAGCAGCAATGTGTTCTTAATTCC...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGAGCCACAATTTGGTTTaGATAAGGCACAGTTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQSHNLV*IRHSSI Trigger: TATCGAACTGTGCCTTATCAAAACCAAATTGTGGCT...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCGTGCACATGTGCGCTGGGAGACACAGGAAAGAGGTTGATCCATGGCTTATGGCCAACAGGCTGTaGCCAGAGGGAACCATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCVHMCAGRHRKEVDPWLMANRL*PEGTMP Trigger: AGGCATGGTTCCCTCTGGTCACAGCCTGTTGGCCAT...AAGCCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAGACATAGGCCCACCCAGTTTGCAGTCTAGGATCTGGCAGGCTAGCCAGGGCACTGCCCTTTaGAGCGAGCTCCCAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FYKDIGPPSLQSRIWQASQGTAL*SELPGC Trigger: GCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTG...GCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | TATAGGCTCAGCAGTGTCCAGGGTAGTTTAAGGAAGGCTGACCAGCAGGTGGAACCCTTTGGGTCCTCATaGGTGACACCGTCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSVQGSLRKADQQVEPFGSS*VTPSGT Trigger: TGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGG...TTCCACCTGCTGGTCAGCCTTCCTTAAACTACCCTGGACACTGCTGAGCCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGATCTAAAGGCCAGTACTaGCCACATTTTCTCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGSKGQY*PHFLLP Trigger: CGGCAGGAGAAAATGTGGCCAGTACTGGCCTTTAGA...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | GCGTGCACATGTGCGCTGGGAGACACAGGAAAGAGGTaGATCCATGGCTTCAGCATAACTGATGGCAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: ACTCALGDTGKR*IHGFSITDGNL Trigger: TAGGTTGCCATCAGTTATGCTGAAGCCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | TCCTGGCGAATCAGACTGGGAAAAGACAGGAACAAGTaGTACGGGCAGTGGACCAGTGATTCCAAGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SWRIRLGKDRNK*YGQWTSDSKER Trigger: CCGTTCCTTGGAATCACTGGTCCACTGCCCGTACAACTTGTTCCTGTCTTTTCCCAGTCTGATTCGCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGGGTGTAACCTGGCAGTaGAGAGGGCAATGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRGVTWQ*RGQWRL Trigger: GAGCCTCCATTGCCCTCTTCACTGCCAGGTTACACC...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGATACTCTGCTGGTTTCTaGCCACTCTCAGGAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGYSAGF*PLSGSQ Trigger: TTGACTTCCTGAGAGTGGTCAGAAACCAGCAGAGTA...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCGTGCACATGTGCGCTGGGAGACACAGGAAAGAGGTTGATCCATGGCTTATCTCTTCAAGAAACTaGTTGGTAGCCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCVHMCAGRHRKEVDPWLISSRN*LVACSS Trigger: GGAGGAGCAGGCTACCAAGCAGTTTCTTGAAGAGAT...AAGCCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGAACTCTTGGATGGTCATaGCATGAGGACCTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGTLGWS*HEDLEH Trigger: ATGTTCCAGGTCCTCATGCCATGACCATCCAAGAGT...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATTAAGAACACATTGCTGCTGGCCCTTTCTAGTGGCAAGTTCACCACACAGGGGTCTGGATACTaGAGGCCCTTTGGGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGIKNTLLLALSSGKFTTQGSGY*RPFGSS Trigger: TGAGGACCCAAAGGGCCTTCAGTATCCAGACCCCTG...TGTGGTGAACTTGCCACTAGAAAGGGCCAGCAGCAATGTGTTCTTAATTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGAATTAAGAACACATTGCTGCTGGCCCTTTCTAGTGGCAAGTTCACCACAGGCCACATTTTCTCCTaGCGCCTTCCTCAAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGIKNTLLLALSSGKFTTGHIFS*RLPQSG Trigger: CCCGCTTTGAGGAAGGCGGCAGGAGAAAATGTGGCC...TGTGGTGAACTTGCCACTAGAAAGGGCCAGCAGCAATGTGTTCTTAATTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATGGTGGCTCAGGGCACTaGCCTTTGGAGCGAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNGGSGH*PLERAP Trigger: GGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACC...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGTGCCGATGCCAGCACTaGAGTGGACCACAATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGCRCQH*SGPQWV Trigger: CACCCATTGTGGTCCACTGCAGTGCTGGCATCGGCA...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAACTTCGTACCTGGAGCACCACGTGCTaGGCAGACTTGTGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFLLFTLGSPLFLLKLRTWSTTC*ADLWGW Trigger: CCACCCCCACAAGTCTGCCCAGCACGTGGTGCTCCA...GGTACGAAGTTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TATAGGCTCAGCAGTGTCCAGGGTAGTTTAAGGAAGGCTGACCAGCAGGTGGAAGCACTCGGAACCATATaGGTGCTCCTACAATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSVQGSLRKADQQVEALGTI*VLLQSA Trigger: TGCTGATTGTAGGAGCACCCATATGGTTCCGAGTGC...TTCCACCTGCTGGTCAGCCTTCCTTAAACTACCCTGGACACTGCTGAGCCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATTAAGAACACATTGCTGCTGGCCCTTTCTAGTGGCAAGTTCACCACACAGGCAGATGTCCAGTaGGCAGAAGGTACCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGIKNTLLLALSSGKFTTQADVQ*AEGTCP Trigger: AGGACAGGTACCTTCTGCTCACTGGACATCTGCCTG...TGTGGTGAACTTGCCACTAGAAAGGGCCAGCAGCAATGTGTTCTTAATTCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGTTGGGTCCTCATGCGTaGCACCGTCTGGAACACATT | + |
|
Preference number: 4 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRLGPHA*HRLEHI Trigger: AATGTGTTCCAGACGGTGTCACGCATGAGGACCCAA...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGCTCATCGAAGGGATCTaGGTGGCCGTTTACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGLIEGI*VAVYLG Trigger: CCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAG...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGCGTGCACATGTGCGCTGGGAGACACAGGAAAGAGGTTGATCCATGGCTTGGTTTAGGACTTTCTTaGCAAGATCTAGCTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCVHMCAGRHRKEVDPWLGLGLS*QDLAQS Trigger: ACTTTGAGCTAGATCTTGGCAAGAAAGTCCTAAACC...AAGCCATGGATCAACCTCTTTCCTGTGTCTCCCAGCGCACATGTGCACGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGCACTCCCTAGGCAGGTaGTGGGTAACTTCAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGHSLGR*WVTSDV Trigger: GACATCTGAAGTTACCCAGCACCTGCCTAGGGAGTG...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGGACCAGAGGGAACCATaGCTTCCCTCTCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGDQREP*LPSLQT Trigger: AGTTTGCAGAGAGGGAAGGCATGGTTCCCTCTGGTC...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGTCGAAGGGATCTGGGTaGCCGTTTACTTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQSKGSG*PFTWGR Trigger: CCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGA...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCCTCCCAAGAAGGCTTAGGAACTGGAAGTaGGTAACCTGGCGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGVFQHKKKRPQFVLPRRLRNWK*VTWRFC Trigger: GCAGAAACGCCAGGTTACCCACTTCCAGTTCCTAAG...CCTTCTTGGGAGGACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | CAGTTTATGTTTTATAAAGACATAGGCCCACCCAGTTaGCAGTCTAGGATCTGGCAGGCTAGCAGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFMFYKDIGPPS*QSRIWQASRQG Trigger: TCCCTGCCTGCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAACATAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGAATGAGGGAAGCAGCTaGGGAAGGGACACCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGNEGSS*GRDTII Trigger: GATTATGGTGTCCCTTCCTCAGCTGCTTCCCTCATT...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAGACATAGGCCCACCCAGTTTGCAGTCTAGGATCTGGCAGGCTAGCGGTTTCCTGGAGACATaGAACAGTGGAAAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FYKDIGPPSLQSRIWQASGFLET*NSGKCQ Trigger: TTGGCACTTTCCACTGTTCCATGTCTCCAGGAAACC...GCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAACTTCGTACCTGGAAGTGGGTAACCTaGCGTTTCTGCCGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLLFTLGSPLFLLKLRTWKWVT*RFCRSS Trigger: AGAGGAGCGGCAGAAACGCCAGGTTACCCACTTCCA...GGTACGAAGTTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGTGCAGTGGACCACAATaGGTGGCTCAGGGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELQHKSPETSTKSICVYMCSGPQ*VAQGTA Trigger: GGCAGTGCCCTGAGCCACCCATTGTGGTCCACTGCA...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCGGAGAGGCTCCTCATaGGGTTTCAGCTTCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: ELHKERCLPTQEKEAPVCRRGSS*GFSFTM Trigger: CATTGTGAAGCTGAAACCTCATGAGGAGCCTCTCCG...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCGAGCAGGCTGATGATTaGATAGGGCACTCGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: DKEELHKERCLPTQEKEAEQADD*IGHSEP Trigger: TGGTTCCGAGTGCCCTATTCAATCATCAGCCTGCTC...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAAGACATAGGCCCACCCAGTTTGCAGTCTAGGATCTGGCAGGCTAGCAATGGAGGCTCCAGTTaGGTCTCGAACATTCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYKDIGPPSLQSRIWQASNGGSS*VSNIQD Trigger: ATCTTGAATGTTCGAGACCCAACTGGAGCCTCCATT...GCTAGCCTGCCAGATCCTAGACTGCAAACTGGGTGGGCCTATGTCTTTATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCATACTGAAGGCCCTTTaGGTCCTCATGCGTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: DKEELHKERCLPTQEKEAILKAL*VLMRDT Trigger: GGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTAT...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | TATAGGCTCAGCAGTGTCCAGGGTAGTTTAAGGAAGGCTGACCAGCAGGTGGAAGATGTCTTTAATATCTaGATCCTTTCCCGGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YRLSSVQGSLRKADQQVEDVFNI*ILSRTL Trigger: TAAAGTCCGGGAAAGGATTCAGATATTAAAGACATC...TTCCACCTGCTGGTCAGCCTTCCTTAAACTACCCTGGACACTGCTGAGCCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGGCAGACTTGTGGGGGTaGTGTAACCTGGCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELQHKSPETSTKSICVYMADLWG*CNLAVK Trigger: CTTCACTGCCAGGTTACACCACCCCCACAAGTCTGC...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGACTTGGGGCAGGAACTaGAAATTCCAAGTAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQTWGRN*KFQVAR Trigger: CCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGT...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTCTACCAACTCTTGGATaGTCATGGCATGAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELHKERCLPTQEKEAPVCLPTLG*SWHEDL Trigger: CAGGTCCTCATGCCATGACCATCCAAGAGTTGGTAG...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTATGCGTGACACCGTCTaGAACACATTAAGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELHKERCLPTQEKEAPVCMRDTV*NTLRVP Trigger: TGGCACCCTTAATGTGTTCCAGACGGTGTCACGCAT...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTaGGTCCCCATCAATGGGGTCATAAGACAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLA*VPINGVIRQSL Trigger: CAGACTCTGTCTTATGACCCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGGGGTGGCCGTTTACTTaGGGCAGGAACTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQHKSPETSTKSICVYMGWPFT*GRNWKF Trigger: GAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCC...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACAGCTTCACTCGGGTTTaGTCTAGGCAGGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPTSIESRGKIFIKEEDSFTRV*SRQGTS Trigger: AGATGTACCCTGCCTAGACCAAACCCGAGTGAAGCT...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAATACTGCTCAGGGGTCTaGATACTGAAGGCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKYCSGV*ILKALW Trigger: CCAAAGGGCCTTCAGTATCCAGACCCCTGAGCAGTA...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | GCAGGGAGAGCTGGGCATTCAGTAGACAAGGAAGAGTaGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGRAGHSVDKEE*HKERCLPTQEK Trigger: TTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTCTACTGAATGCCCAGCTCTCCCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTTCGGAACCATATGGGTaGTCCTACAATCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELHKERCLPTQEKEAPVCSEPYG*SYNQHF Trigger: AAAGTGCTGATTGTAGGAGCACCCATATGGTTCCGA...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAACCTACAGCCATACTCTaGTGGTTTCTGACCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKPTAIL*WFLTTL Trigger: GAGAGTGGTCAGAAACCAGCAGAGTATGGCTGTAGG...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGCACATTCCAGGAGAGTaGAGAAACATTATACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LDSGSSVNLFLALVPINGHIPGE*RNIILY Trigger: GTACAGTATAATGTTTCTCCACTCTCCTGGAATGTG...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATTTTCTTCAGTCGAGCTaGAAATGCTCCCTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNFLQSS*KCSLQQ Trigger: CTGCTGAAGGGAGCATTTCCAGCTCGACTGAAGAAA...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACTCCCTAGGCAGGTGCTaGGTAACTTCAGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAPTSIESRGKIFIKEEDSLGRC*VTSDVF Trigger: AAAGACATCTGAAGTTACCCAGCACCTGCCTAGGGA...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATACCAGTCCATTTCTTTaGGTTTCAAAGCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNTSPFL*VSKLST Trigger: TGTGGACAGCTTTGAAACTCAAAGAAATGGACTGGT...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAAGTACTGTCCACTTGTTaGTCTCTTCAAGAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKVLSTC*SLQETA Trigger: AGCAGTTTCTTGAAGAGATCAACAAGTGGACAGTAC...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGCAACATAAATCCCCAGAGACTTCTACAAAGAGTATCTGTGTGTATATGCGCACATGTCATAGATaGACACCAGTCCATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELQHKSPETSTKSICVYMRTCHR*TPVHFF Trigger: AAAGAAATGGACTGGTGTTCATCTATGACATGTGCG...CATATACACACAGATACTCTTTGTAGAAGTCTCTGGGGATTTATGTTGCAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGTGCAAACTCCAGAATTaGCTTGTAGCAAAAGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQCKLQN*LVAKVV Trigger: TACTACTTTTGCTACAAGGCAATTCTGGAGTTTGCA...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| 3UTR CAA 72 bp | GCTAAATTGAACCAGTGTTACCATAAGTCAGTATTTTaGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: AKLNQCYHKSVF*APTSIESRGKI Trigger: AATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAAAAATACTGACTTATGGTAACACTGGTTCAATTTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | CAGCACTGCAGTGGACCACAATGGGTGGCTCAGGGCACTGCCCTTTaGAGCGAGCTCCCAGGTTGCCTACAGCCATACTCTGCTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHCSGPQWVAQGTAL*SELPGCLQPYSAGF Trigger: GAAACCAGCAGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCACTGCAGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 90 bp | GCACCACGTGCTGGGCAGACTTGTGGGGGTGGTGTAACCTGGCAGTaGAGAGGGCAATGGAGGCTCCAGTTGGGTCTCGAACATTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: APRAGQTCGGGVTWQ*RGQWRLQLGLEHSR Trigger: TCTTGAATGTTCGAGACCCAACTGGAGCCTCCATTGCCCTCTTCACTGCCAGGTTACACCACCCCCACAAGTCTGCCCAGCACGTGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS TCA 90 bp | CTGCTCAGGGGTCTGGATACTGAAGGCCCTTTGGGTCCTCATGCGTaGCACCGTCTGGAACACATTAAGGGTGCCAAGCTCCTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRGLDTEGPLGPHA*HRLEHIKGAKLLQL Trigger: CAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTATCCAGACCCCTGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | GTCTGGATACTGAAGGCCCTTTGGGTCCTCATGCGTGACACCGTCTaGAACACATTAAGGGTGCCAAGCTCCTCCAGCTGTGCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VWILKALWVLMRDTV*NTLRVPSSSSCARQ Trigger: CTGCCTGGCACAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTATCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 90 bp | CACTGCCCTTTGGAGCGAGCTCCCAGGTTGCCTACAGCCATACTCTaGTGGTTTCTGACCACTCTCAGGAAGTCAATGAGGGAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCPLERAPRLPTAIL*WFLTTLRKSMREAA Trigger: AGCTGCTTCCCTCATTGACTTCCTGAGAGTGGTCAGAAACCAGCAGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | GCAGGAGGTAGGGAAGACAGGATGATCTCATCGAAGGGATCTGGGTaGCCGTTTACTTGGGGCAGGAACTGGAAATTCCAAGTAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGREDRMISSKGSG*PFTWGRNWKFQVAR Trigger: CCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTCTTCCCTACCTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 90 bp | CATGGCCAACAGGCTGTGACCAGAGGGAACCATGCCTTCCCTCTCTaGAAACTCCAGAATTGCCTTGTAGCAAAAGTAGTACTGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HGQQAVTRGNHAFPL*KLQNCLVAKVVLLR Trigger: CCTGAGCAGTACTACTTTTGCTACAAGGCAATTCTGGAGTTTGCAGAGAGGGAAGGCATGGTTCCCTCTGGTCACAGCCTGTTGGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 90 bp | GAATTGCCTTGTAGCAAAAGTAGTACTGCTCAGGGGTCTGGATACTaGAGGCCCTTTGGGTCCTCATGCGTGACACCGTCTGGAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: ELPCSKSSTAQGSGY*RPFGSSCVTPSGTH Trigger: ATGTGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTATCCAGACCCCTGAGCAGTACTACTTTTGCTACAAGGCAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | ATCTCATCGAAGGGATCTGGGTGGCCGTTTACTTGGGGCAGGAACTaGAAATTCCAAGTAGCCAGGTCAATTTTGACGTACCCACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISSKGSGWPFTWGRN*KFQVARSILTYPPR Trigger: TCTGGGTGGGTACGTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGTCAGGGCACTGCCCTTaGGAGCGAGCTCCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQSGHCP*ERAPRL Trigger: CAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGA...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | GAAGACAGGATGATCTCATCGAAGGGATCTGGGTGGCCGTTTACTTaGGGCAGGAACTGGAAATTCCAAGTAGCCAGGTCAATTTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: EDRMISSKGSGWPFT*GRNWKFQVARSILT Trigger: CGTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 90 bp | CTGAATCCTTTCCCGGACTTTATCCTTCAAGAGCAGGCTGATGATTaGATAGGGCACTCGGAACCATATGGGTGCTCCTACAATCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LNPFPDFILQEQADD*IGHSEPYGCSYNQH Trigger: GTGCTGATTGTAGGAGCACCCATATGGTTCCGAGTGCCCTATTCAATCATCAGCCTGCTCTTGAAGGATAAAGTCCGGGAAAGGATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 90 bp | ATTCCAAGTAGCCAGGTCAATTTTGACGTACCCACCCAGATTTTCTaGAAGGCACTCCCTAGGCAGGTGCTGGGTAACTTCAGATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IPSSQVNFDVPTQIF*KALPRQVLGNFRCL Trigger: AAGACATCTGAAGTTACCCAGCACCTGCCTAGGGAGTGCCTTCCAGAAAATCTGGGTGGGTACGTCAAAATTGACCTGGCTACTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS-3UTR CAA 90 bp | TGTACGGGCAGTGGACCAGTGATTCCAAGGAACGGACTCATGCAGCCAAAGGGAAATCACCAAAACTTTTaGCTCCCAAACCATAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CTGSGPVIPRNGLMQPKGNHQNF*LPNHKP Trigger: TGGCTTATGGTTTGGGAGCAAAAAGTTTTGGTGATT...TCCCTTTGGCTGCATGAGTCCGTTCCTTGGAATCACTGGTCCACTGCCCGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCTCCAACAAGCATAGAGTCCAGAGGGAAAATTTTCATTAAGGAAGAAGACCAGATAAAACAGAGCTaGGAGCACCACGTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPTSIESRGKIFIKEEDQIKQS*EHHVLG Trigger: GCCCAGCACGTGGTGCTCCAAGCTCTGTTTTATCTG...GTCTTCTTCCTTAATGAAAATTTTCCCTCTGGACTCTATGCTTGTTGGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCCAGTTTGTTGGGTGGCCGTTTACTaGGGGCAGGAACTGGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: ELHKERCLPTQEKEAPVCWVAVY*GQELEI Trigger: AATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCA...ACAAACTGGGGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | TTGGACTCTGGCAGCTCTGTAAATTTATTTCTAGCCTTGGTCCCCATCAATGGGTGCCTTCCTTTCTTCTaGTTTCTCTGTAGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDSGSSVNLFLALVPINGCLPFF*FLCSSG Trigger: TCCACTGCTACAGAGAAACAAGAAGAAAGGAAGGCA...CCCATTGATGGGGACCAAGGCTAGAAATAAATTTACAGAGCTGCCAGAGTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCCAATGGAGGCTCCAGTaGGGTCTCGAACATTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DKEELHKERCLPTQEKEAQWRLQ*GLEHSR Trigger: TCTTGAATGTTCGAGACCCAACTGGAGCCTCCATTG...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCGTAGCCAGGTCAATTTaGACGTACCCACCCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: DKEELHKERCLPTQEKEAVARSI*TYPPRF Trigger: AAATCTGGGTGGGTACGTCAAAATTGACCTGGCTAC...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGGAAGAGTTGCATAAAGAAAGGTGTCTTCCAACACAAGAAAAAGAGGCCATAGATGCCCCGCTTTaGCCTGGTGTTAACATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DKEELHKERCLPTQEKEAIDAPL*PGVNIV Trigger: GACTATGTTAACACCAGGCAAAAGCGGGGCATCTAT...GGCCTCTTTTTCTTGTGTTGGAAGACACCTTTCTTTATGCAACTCTTCCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCCTTTATTCCTTTTAAAACTTCGTACCGATTACTTTGGACTCTGGCAGAGGTTTAGGACTTTCTaGCCAAGATCTAGCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPLFLLKLRTDYFGLWQRFRTF*PRSSSK Trigger: CTTTGAGCTAGATCTTGGCAAGAAAGTCCTAAACCT...CTGCCAGAGTCCAAAGTAATCGGTACGAAGTTTTAAAAGGAATAAAGGAGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | GGACATTCTCTAGAATATGTAACTTGGTCAAGCTTTCTGGGTAGGAAGGTGAATTGTACTGTCCACTTGTaGATCTCTTCAAGAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSLEYVTWSSFLGRKVNCTVHL*ISSRNC Trigger: GCAGTTTCTTGAAGAGATCAACAAGTGGACAGTACA...ATTCACCTTCCTACCCAGAAAGCTTGACCAAGTTACATATTCTAGAGAATGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS-3UTR CAA 90 bp | TTTCATGGTAGGTTCCTCTTGTTCACTCTGGGCTCTCCTTTATTCCTTTTAAAACTGCAAACTCCAGAATaGCCTTGTAGCAAAAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FHGRFLLFTLGSPLFLLKLQTPE*PCSKSS Trigger: ACTACTTTTGCTACAAGGCAATTCTGGAGTTTGCAG...TTTTAAAAGGAATAAAGGAGAGCCCAGAGTGAACAAGAGGAACCTACCATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 72 bp | GCACTGCAGTGGACCACAATGGGTGGCTCAGGGCACTaGCCTTTGGAGCGAGCTCCCAGGTTGCCTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALQWTTMGGSGH*PLERAPRLPTA Trigger: GGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCACTGCAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | GCTTGGAGCACCACGTGCTGGGCAGACTTGTGGGGGTaGTGTAACCTGGCAGTGAAGAGGGCAATGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWSTTCWADLWG*CNLAVKRAMEA Trigger: AGCCTCCATTGCCCTCTTCACTGCCAGGTTACACCACCCCCACAAGTCTGCCCAGCACGTGGTGCTCCAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CAA 72 bp | CAGTGGACCACAATGGGTGGCTCAGGGCACTGCCCTTaGGAGCGAGCTCCCAGGTTGCCTACAGCCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: QWTTMGGSGHCP*ERAPRLPTAIL Trigger: GAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 72 bp | GCTGGGCAGACTTGTGGGGGTGGTGTAACCTGGCAGTaGAGAGGGCAATGGAGGCTCCAGTTGGGTCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AGQTCGGGVTWQ*RGQWRLQLGLE Trigger: TTCGAGACCCAACTGGAGCCTCCATTGCCCTCTTCACTGCCAGGTTACACCACCCCCACAAGTCTGCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CCA 72 bp | AGTGGACCACAATGGGTGGCTCAGGGCACTGCCCTTTaGAGCGAGCTCCCAGGTTGCCTACAGCCATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPQWVAQGTAL*SELPGCLQPYS Trigger: AGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGTGGTCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 72 bp | GGCTCAGGGCACTGCCCTTTGGAGCGAGCTCCCAGGTaGCCTACAGCCATACTCTGCTGGTTTCTGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: GSGHCPLERAPR*PTAILCWFLTT Trigger: AGTGGTCAGAAACCAGCAGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 90 bp | ACAATGGGTGGCTCAGGGCACTGCCCTTTGGAGCGAGCTCCCAGGTaGCCTACAGCCATACTCTGCTGGTTTCTGACCACTCTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TMGGSGHCPLERAPR*PTAILCWFLTTLRK Trigger: CTTCCTGAGAGTGGTCAGAAACCAGCAGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAAAGGGCAGTGCCCTGAGCCACCCATTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | CTGAAGGCCCTTTGGGTCCTCATGCGTGACACCGTCTaGAACACATTAAGGGTGCCAAGCTCCTCCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LKALWVLMRDTV*NTLRVPSSSSC Trigger: ACAGCTGGAGGAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 72 bp | GGTCTGGATACTGAAGGCCCTTTGGGTCCTCATGCGTaGCACCGTCTGGAACACATTAAGGGTGCCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLDTEGPLGPHA*HRLEHIKGAKL Trigger: GAGCTTGGCACCCTTAATGTGTTCCAGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTATCCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 72 bp | CGTCCATGGCCAACAGGCTGTGACCAGAGGGAACCATaGCTTCCCTCTCTGCAAACTCCAGAATTGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPWPTGCDQREP*LPSLQTPELPC Trigger: ACAAGGCAATTCTGGAGTTTGCAGAGAGGGAAGGCATGGTTCCCTCTGGTCACAGCCTGTTGGCCATGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 72 bp | TTGGAGCGAGCTCCCAGGTTGCCTACAGCCATACTCTaGTGGTTTCTGACCACTCTCAGGAAGTCAATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LERAPRLPTAIL*WFLTTLRKSMR Trigger: CCTCATTGACTTCCTGAGAGTGGTCAGAAACCAGCAGAGTATGGCTGTAGGCAACCTGGGAGCTCGCTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 72 bp | TGTAGCAAAAGTAGTACTGCTCAGGGGTCTGGATACTaGAGGCCCTTTGGGTCCTCATGCGTGACACCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSKSSTAQGSGY*RPFGSSCVTPS Trigger: AGACGGTGTCACGCATGAGGACCCAAAGGGCCTTCAGTATCCAGACCCCTGAGCAGTACTACTTTTGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | AGCCAGGTCAATTTTGACGTACCCACCCAGATTTTCTaGAAGGCACTCCCTAGGCAGGTGCTGGGTAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SQVNFDVPTQIF*KALPRQVLGNF Trigger: GAAGTTACCCAGCACCTGCCTAGGGAGTGCCTTCCAGAAAATCTGGGTGGGTACGTCAAAATTGACCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CAA 72 bp | GATGATCTCATCGAAGGGATCTGGGTGGCCGTTTACTaGGGGCAGGAACTGGAAATTCCAAGTAGCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DDLIEGIWVAVY*GQELEIPSSQV Trigger: GACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS GCA 72 bp | GGGAACCATGCCTTCCCTCTCTGCAAACTCCAGAATTaGCTTGTAGCAAAAGTAGTACTGCTCAGGGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GNHAFPLCKLQN*LVAKVVLLRGL Trigger: CAGACCCCTGAGCAGTACTACTTTTGCTACAAGGCAATTCTGGAGTTTGCAGAGAGGGAAGGCATGGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | ATGATCTCATCGAAGGGATCTGGGTGGCCGTTTACTTaGGGCAGGAACTGGAAATTCCAAGTAGCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: MISSKGSGWPFT*GRNWKFQVARS Trigger: TGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | AGGGAAGACAGGATGATCTCATCGAAGGGATCTGGGTaGCCGTTTACTTGGGGCAGGAACTGGAAATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: REDRMISSKGSG*PFTWGRNWKFQ Trigger: TTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTCTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 90 bp | TTTACTTGGGGCAGGAACTGGAAATTCCAAGTAGCCAGGTCAATTTaGACGTACCCACCCAGATTTTCTGGAAGGCACTCCCTAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTWGRNWKFQVARSI*TYPPRFSGRHSLGR Trigger: CCTGCCTAGGGAGTGCCTTCCAGAAAATCTGGGTGGGTACGTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CAA 90 bp | GGAAGACAGGATGATCTCATCGAAGGGATCTGGGTGGCCGTTTACTaGGGGCAGGAACTGGAAATTCCAAGTAGCCAGGTCAATTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRQDDLIEGIWVAVY*GQELEIPSSQVNFD Trigger: GTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTTCGATGAGATCATCCTGTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS TCA 72 bp | TTCCCGGACTTTATCCTTCAAGAGCAGGCTGATGATTaGATAGGGCACTCGGAACCATATGGGTGCTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FPDFILQEQADD*IGHSEPYGCSY Trigger: GTAGGAGCACCCATATGGTTCCGAGTGCCCTATTCAATCATCAGCCTGCTCTTGAAGGATAAAGTCCGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CCA 72 bp | AAGGGATCTGGGTGGCCGTTTACTTGGGGCAGGAACTaGAAATTCCAAGTAGCCAGGTCAATTTTGACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KGSGWPFTWGRN*KFQVARSILTY Trigger: GTACGTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCCCCAAGTAAACGGCCACCCAGATCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 72 bp | GGCAGGAACTGGAAATTCCAAGTAGCCAGGTCAATTTaGACGTACCCACCCAGATTTTCTGGAAGGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRNWKFQVARSI*TYPPRFSGRHS Trigger: GGAGTGCCTTCCAGAAAATCTGGGTGGGTACGTCAAAATTGACCTGGCTACTTGGAATTTCCAGTTCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CAA 72 bp | CCCGCACATGTCATAGATGAACACCAGTCCATTTCTTaGAGTTTCAAAGCTGTCCACAGCTCTGTCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PAHVIDEHQSIS*SFKAVHSSVQQ Trigger: CTGCTGGACAGAGCTGTGGACAGCTTTGAAACTCAAAGAAATGGACTGGTGTTCATCTATGACATGTGCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034832.8 ENSMUST00000216034.2 |
||
| CDS CAA 72 bp | CCGCTTTTGCCTGGTGTTAACATAGTCTACCAACTCTaGGATGGTCATGGCATGAGGACCTGGAACATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PLLPGVNIVYQL*DGHGMRTWNMY Trigger: GTACATGTTCCAGGTCCTCATGCCATGACCATCCAAGAGTTGGTAGACTATGTTAACACCAGGCAAAAGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 90 bp | GCCACATTCCAGGAGAGTGGAGAAACATTATACTGTACTGTCCACTaGTTGATCTCTTCAAGAAACTGCTTGGTAGCCTGCTCCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ATFQESGETLYCTVH*LISSRNCLVACSSS Trigger: CGAGGAGGAGCAGGCTACCAAGCAGTTTCTTGAAGAGATCAACAAGTGGACAGTACAGTATAATGTTTCTCCACTCTCCTGGAATGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 90 bp | AACTCTACAGCACGGAGCACATCAAACTTTCTGGCCATGAGGAACTaGACAGCCACATTCCAGGAGAGTGGAGAAACATTATACTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: NSTARSTSNFLAMRN*TATFQESGETLYCT Trigger: AGTACAGTATAATGTTTCTCCACTCTCCTGGAATGTGGCTGTCAAGTTCCTCATGGCCAGAAAGTTTGATGTGCTCCGTGCTGTAGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||
| CDS CAA 72 bp | CAGGAGAGTGGAGAAACATTATACTGTACTGTCCACTaGTTGATCTCTTCAAGAAACTGCTTGGTAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QESGETLYCTVH*LISSRNCLVAC Trigger: GCAGGCTACCAAGCAGTTTCTTGAAGAGATCAACAAGTGGACAGTACAGTATAATGTTTCTCCACTCTCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034832.8 |
||