Pregenerated sensors for PTPN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004266Ensembl transcript IDs: ENSMUST00000004377.15, ENSMUST00000112484.10, ENSMUST00000171549.9, ENSMUST00000173315.8, ENSMUST00000173647.2, ENSMUST00000174265.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGTCCTAGGGTCTGGTGAGGGCCACAGGTCTCAGTCTATCGGGTaGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VVLGSGEGHRSQSIG*KPLQGSRLMHGHLQ Trigger: CTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGAGACCTGTGGCCCTCACCAGACCCTAGGACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| 3UTR CCA 90 bp | GTGGTCCTAGGGTCTGGTGAGGGCCACAGGTCTCAGTCTATCGGGTaGAAGCCTCTGCAGGGATCAAGGCTGATGCTGCAAATAAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: VVLGSGEGHRSQSIG*KPLQGSRLMLQIKE Trigger: CTCTTTTATTTGCAGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGAGACCTGTGGCCCTCACCAGACCCTAGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| 3UTR TCA 90 bp | GCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATaGCCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: ARLSLGTCRAIYRFR*PQSLKLQEDGGGPR Trigger: CCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| 3UTR CCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTaGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: GPGNLFTRIEGPGSP*GLAGLYTDSDDHSH Trigger: GTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGAGGTCCTAGGGTCTGGTaGGGGCCACAGGTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: NRRARLSLGTCRAIYRFRGPRVW*GPQVSV Trigger: GACTGAGACCTGTGGCCCTCACCAGACCCTAGGACC...TCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| 3UTR-3UTR TCA 90 bp | ACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATGGTCCTAGGGTCTGGTaGGGGCCACAGGTCTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: TRIEGPGSPWGLAGLYTDGPRVW*GPQVSV Trigger: GACTGAGACCTGTGGCCCTCACCAGACCCTAGGACC...ATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| 3UTR CCA 72 bp | GGGTCTGGTGAGGGCCACAGGTCTCAGTCTATCGGGTaGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGC | + |
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Preference number: 3 (lower is better) Translates to: GSGEGHRSQSIG*KPLQGSRLMHG Trigger: GCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGAGACCTGTGGCCCTCACCAGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| 3UTR CCA 72 bp | GGGTCTGGTGAGGGCCACAGGTCTCAGTCTATCGGGTaGAAGCCTCTGCAGGGATCAAGGCTGATGCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GSGEGHRSQSIG*KPLQGSRLMLQ Trigger: TTGCAGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGAGACCTGTGGCCCTCACCAGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| 3UTR-3UTR CAA 90 bp | GGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAACGTCTGAACTGAAGTaGGGGAAATGGGGGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GPALPGDLPGYIQIQMTTTSELK*GKWGQG Trigger: TCCCTGCCCCCATTTCCCCAACTTCAGTTCAGACGT...TGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| 3UTR CCA 72 bp | AATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTaGGGACTTGCCGGGCTATATACAGATTCAGATGAC | + |
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Preference number: 3 (lower is better) Translates to: NLFTRIEGPGSP*GLAGLYTDSDD Trigger: GTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR TCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACCTTGGCCTGCAGCAGTaGCTCCGCCTGCCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHLGLQQ*LRLPSR Trigger: TCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAG...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCGGCTCGCCCTTGGCCTaGAGCAGTGACTCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTGSPLA*SSDSAC Trigger: GCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCC...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TCTATCGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGGGCTCGCCCTTGGCCTaGAGCAGTGACTCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SIGWKPLQGSRLMHGHLQGSPLA*SSDSAC Trigger: GCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCC...CTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACTCCAGGGCTCGCCCTTaGCCTGCAGCAGTGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: EGPGSPWGLAGLYTDSDDSRARP*PAAVTP Trigger: CGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGA...GTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCTCCAGGGCTCGCCCTTaGCCTGCAGCAGTGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTSRARP*PAAVTP Trigger: CGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGA...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGGCTCGCCCTTGGCCTaGAGCAGTGACTCCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDGSPLA*SSDSAC Trigger: GCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCC...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCCTGGTTCTTGCGGCTaGGCCGAGCCAGGAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PGSPWGLAGLYTDSDDHSPGSCG*AEPGSS Trigger: GGAGCTTCCTGGCTCGGCCCAGCCGCAAGAACCAGG...ACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGGGAGAAGTCACCCTaGTTCTTGCGGCTGGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHREKSP*FLRLGR Trigger: TCGGCCCAGCCGCAAGAACCAGGGTGACTTCTCCCT...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAAGGGCCAGCCTTGGGCTaGTCATTGAGCACAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RVEASAGIKADAWPPADEGPALG*SLSTES Trigger: GCTCTCTGTGCTCAATGACCAGCCCAAGGCTGGCCC...TTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | AATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGACTTGGCCTGCAGCAGTaGCTCCGCCTGCCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NRRARLSLGTCRAIYRFRLGLQQ*LRLPSR Trigger: TCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAG...TCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAATCTGATCCAGAAAGCTaGGGACACCCCCAGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RVEASAGIKADAWPPADESDPES*GHPQAH Trigger: GTGAGCCTGGGGGTGTCCTCAGCTTTCTGGATCAGA...TTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TCAGTCTATCGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGTGCCATCTCGGTCCTaGAGGATGCCCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVYRVEASAGIKADAWPPVPSRS*RMPCCC Trigger: GCAGCAGCAGGGCATCCTGCAGGACCGAGATGGCAC...AGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACACCACCTCTCACTGGTaGGGTCCGAGCAGTTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHTTSHW*GPSSSV Trigger: CACTGAACTGCTCGGACCCCACCAGTGAGAGGTGGT...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCTCCAGGGCTCGCCCTTaGCCTGCAGCAGTGACTCCG | + |
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Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFSRARP*PAAVTP Trigger: CGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGA...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCCTGAGCGGGGAACCTaGGCCAGCCTTGGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLAPERGT*ASLGLV Trigger: GACCAGCCCAAGGCTGGCCCAGGTTCCCCGCTCAGG...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTCTGCATCAGGCCCGCTaGGGTCCCGGTGAAACCACC | + |
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Preference number: 4 (lower is better) Translates to: ALPGDLPGYIQIQMTTVTLHQAR*GPGETT Trigger: GGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAG...AGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCCTCGGTCCTGCAGGATaGCCTGCTGCTGCGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTLGPAG*PAAACN Trigger: ATTACACGCAGCAGCAGGGCATCCTGCAGGACCGAG...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | GGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACACTCGGTCCTGCAGGATaGCCTGCTGCTGCGTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: GPALPGDLPGYIQIQMTTLGPAG*PAAACN Trigger: ATTACACGCAGCAGCAGGGCATCCTGCAGGACCGAG...TGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCGTGCCATCTCGGTCCTaGAGGATGCCCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFVPSRS*RMPCCC Trigger: GCAGCAGCAGGGCATCCTGCAGGACCGAGATGGCAC...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATCCTCGGTCTGCACCATaGCGGAGCGCTGTGCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDPRSAP*RSAVLV Trigger: TACGAGCACAGCGCTCCGGCATGGTGCAGACCGAGG...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTACCTGAGCGGGGAACCTaGGCCAGCCTTGGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: NLFTRIEGPGSPWGLAGLPERGT*ASLGLV Trigger: GACCAGCCCAAGGCTGGCCCAGGTTCCCCGCTCAGG...TAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACCCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHPPPCA*RKYARL Trigger: AAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGG...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR GCA 90 bp | GCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTCCTCGGTCTGCACCATaGCGGAGCGCTGTGCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: ALPGDLPGYIQIQMTTVTPRSAP*RSAVLV Trigger: TACGAGCACAGCGCTCCGGCATGGTGCAGACCGAGG...AGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACACCTCGGTCTGCACCATaGCGGAGCGCTGTGCTCGTA | + |
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Preference number: 4 (lower is better) Translates to: FTRIEGPGSPWGLAGLYTPRSAP*RSAVLV Trigger: TACGAGCACAGCGCTCCGGCATGGTGCAGACCGAGG...TGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAATGCCCAGTGCCCTCCAGATATGTaGCCGTGGTACCACCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: KPLQGSRLMHGHLQTNAQCPPDM*PWYHLS Trigger: TGAGAGGTGGTACCACGGCCACATATCTGGAGGGCA...CTGGGCATTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAATTGCCCTCCAGATATGTaGCCGTGGTACCACCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GWKPLQGSRLMHGHLQTNCPPDM*PWYHLS Trigger: TGAGAGGTGGTACCACGGCCACATATCTGGAGGGCA...ATTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TCAGTCTATCGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTCTTGCTCTTGTTCTCTaGCCGCTGCCCTTCCAGACG | + |
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Preference number: 4 (lower is better) Translates to: SVYRVEASAGIKADAWPPLALVL*PLPFQT Trigger: CGTCTGGAAGGGCAGCGGCCAGAGAACAAGAGCAAG...AGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACCCTTGGGCTGGTCATTaGGCACAGAGAGCACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHPWAGH*AQRAQN Trigger: ATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGG...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCAGTCACCCTGGTTCTTaGGGCTGGGCCGAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGSHPGS*GWAEPG Trigger: TCCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACT...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTAAGTCACCCTGGTTCTTaGGGCTGGGCCGAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NLFTRIEGPGSPWGLAGLSHPGS*GWAEPG Trigger: TCCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACT...TAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACACGAGTGTTCTCCTaGCAAGCCATCTGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTTRVFS*QAICQK Trigger: CTTCTGGCAGATGGCTTGGCAGGAGAACACTCGTGT...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | ACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATCATAGACACGCTGAGTaGCCACCTCGGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TRIEGPGSPWGLAGLYTDHRHAE*PPRASM Trigger: CATACTGGCCCGAGGTGGGCACTCAGCGTGTCTATG...ATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCCATAGACACGCTGAGTaGCCACCTCGGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFHRHAE*PPRASM Trigger: CATACTGGCCCGAGGTGGGCACTCAGCGTGTCTATG...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CCGTGCCATGCACGCACGTCTGAACTGAAGTTGGGGAAATGGGGGCAGGGAGAGCACAATGATGGGCCCTaGATGAGGCAAACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCHARTSELKLGKWGQGEHNDGP*MRQTFL Trigger: CAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTG...CTCTCCCTGCCCCCATTTCCCCAACTTCAGTTCAGACGTGCGTGCATGGCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| CDS-3UTR GCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACCACAATGATGGGCCCTaGATGAGGCAAACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHHNDGP*MRQTFL Trigger: CAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTG...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTACCTGGTTCTTGCGGCTaGGCCGAGCCAGGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLPGSCG*AEPGSS Trigger: GGAGCTTCCTGGCTCGGCCCAGCCGCAAGAACCAGG...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCAGGGAGAAGTCACCCTaGTTCTTGCGGCTGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLAREKSP*FLRLGR Trigger: TCGGCCCAGCCGCAAGAACCAGGGTGACTTCTCCCT...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGGGTACCACCTCTCACTaGTGGGGTCCGAGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNLFTRIEGPGSPWGLAGGTTSH*WGPSSS Trigger: TGAACTGCTCGGACCCCACCAGTGAGAGGTGGTACC...CCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCCCTGAGCGGGGAACCTaGGCCAGCCTTGGGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNTQWSREFIYKNRRARLPERGT*ASLGLV Trigger: GACCAGCCCAAGGCTGGCCCAGGTTCCCCGCTCAGG...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACACCCAGAAGCCAGCCTTaGCTGTGTCCTCCGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FTRIEGPGSPWGLAGLYTPRSQP*LCPPTP Trigger: AGGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGG...TGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACCCCAGAAGCCAGCCTTaGCTGTGTCCTCCGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYKNRRARLSLGTCRAIYPRSQP*LCPPTP Trigger: AGGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGG...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCCCAGAAGCCAGCCTTaGCTGTGTCCTCCGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLAPRSQP*LCPPTP Trigger: AGGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGG...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCCACCTCGGGCCAGTATaGGACACATTTGTTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFHLGPV*DTFVPA Trigger: GGCCGGAACAAATGTGTCCCATACTGGCCCGAGGTG...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCCTGCATCAGGCCCGCTaGGGTCCCGGTGAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GNTQWSREFIYKNRRARLLHQAR*GPGETT Trigger: GGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAG...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCCCTTGGGCTGGTCATTaGGCACAGAGAGCACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTPWAGH*AQRAQN Trigger: ATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGG...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGCGCTGCAATGCACAATaGTGGGCCCTGCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLNYKKMGVVLGSGEGHRRCNAQ*WALHEA Trigger: TGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCG...CCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SREFIYKNRRARLSLGTCLQQGL*IRPAEV Trigger: GACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAG...GCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATCTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFTRIEGPGSPWGLAGLYLQQGL*IRPAEV Trigger: GACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAG...ATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCTCGGTCCTGCAGGATaGCCTGCTGCTGCGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLALGPAG*PAAACN Trigger: ATTACACGCAGCAGCAGGGCATCCTGCAGGACCGAG...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | GGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTGTCCTCCGACTCCTaGTTCTTGTTCAGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPALPGDLPGYIQIQMTTVSSDS*FLFSSK Trigger: CTTGGAACTGAACAAGAAGCAGGAGTCGGAGGACAC...TGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATTTGTTCTCTGGCCGCTaGCCTTCCAGACGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDLFSGR*PSRRWC Trigger: ACACCAACGTCTGGAAGGGCAGCGGCCAGAGAACAA...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCTTACTGTCACGTCCCTaGAGGATCACTCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFLLSRP*RITRLW Trigger: CCACAGCCGAGTGATCCTGCAGGGACGTGACAGTAA...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGGGTACCACCTCTCACTaGTGGGGTCCGAGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLNYKKMGVVLGSGEGHRGTTSH*WGPSSS Trigger: TGAACTGCTCGGACCCCACCAGTGAGAGGTGGTACC...CCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTGGTACCACCTCTCACTaGTGGGGTCCGAGCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPGDLPGYIQIQMTTVTGTTSH*WGPSSS Trigger: TGAACTGCTCGGACCCCACCAGTGAGAGGTGGTACC...AGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCTTGCTCTTGTTCTCTaGCCGCTGCCCTTCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLALALVL*PLPFQT Trigger: CGTCTGGAAGGGCAGCGGCCAGAGAACAAGAGCAAG...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACTCACTGGGAACCCCATaGTCAGGCCAGCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IYKNRRARLSLGTCRAIYSLGTP*SGQLRY Trigger: GTACCTGAGCTGGCCTGACCATGGGGTTCCCAGTGA...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCTCACTGGGAACCCCATaGTCAGGCCAGCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLASLGTP*SGQLRY Trigger: GTACCTGAGCTGGCCTGACCATGGGGTTCCCAGTGA...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCTTGGCCTGCAGCAGTaGCTCCGCCTGCCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSLGLQQ*LRLPSR Trigger: TCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAG...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACATAACCTTGATATaGGTGACCCTGAGCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSPWGLAGLYTDSDDHSHITLI*VTLSGE Trigger: TTCCCCGCTCAGGGTCACTCATATCAAGGTTATGTG...ACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGTCTGATCCAGAAAGCTaGGGACACCCCCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGPGNLFTRIEGPGSPWSDPES*GHPQAH Trigger: GTGAGCCTGGGGGTGTCCTCAGCTTTCTGGATCAGA...CCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTCGCTGCAATGCACAATaGTGGGCCCTGCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLRCNAQ*WALHEA Trigger: TGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCG...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTACTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLLQQGL*IRPAEV Trigger: GACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAG...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACTTGTTCTCTGGCCGCTaGCCTTCCAGACGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYKNRRARLSLGTCRAIYLFSGR*PSRRWC Trigger: ACACCAACGTCTGGAAGGGCAGCGGCCAGAGAACAA...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCTTACTGTCACGTCCCTaGAGGATCACTCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLALLSRP*RITRLW Trigger: CCACAGCCGAGTGATCCTGCAGGGACGTGACAGTAA...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGCATGCCGGAGCGCTGTaGTCGTACCATCTGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSGPGNLFTRIEGPGSPWHAGAL*SYHLDG Trigger: ACCATCCAGATGGTACGAGCACAGCGCTCCGGCATG...CCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACCACCTCTCACTGGTaGGGTCCGAGCAGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTRIEGPGSPWGLAGLYTTSHW*GPSSSV Trigger: CACTGAACTGCTCGGACCCCACCAGTGAGAGGTGGT...ATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATACTTGCTCTTGTTCTCTaGCCGCTGCCCTTCCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: FIYKNRRARLSLGTCRAILALVL*PLPFQT Trigger: CGTCTGGAAGGGCAGCGGCCAGAGAACAAGAGCAAG...TATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACCTCGGGCCAGTATaGGACACATTTGTTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGHLGPV*DTFVPA Trigger: GGCCGGAACAAATGTGTCCCATACTGGCCCGAGGTG...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCATGCTCCCTACTGTTaGTCACAGAGTAGAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGPGSPWGLAGLYTDSDDHAPYC*SQSRDH Trigger: ATGGTCTCTACTCTGTGACCAACAGTAGGGAGCATG...GTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGTCACTGGGAACCCCATaGTCAGGCCAGCTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGPGNLFTRIEGPGSPWSLGTP*SGQLRY Trigger: GTACCTGAGCTGGCCTGACCATGGGGTTCCCAGTGA...CCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATCCATACTCCGACTCCTaGCCCTTCTGGGATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDPYSDS*PFWDCM Trigger: CATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGG...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR TCA 90 bp | GATGCTGCAAATAAAAGAGAGGAAGTGGATCAAAGGTTGTCTGGGAAGGGGATACTGCATCAGGCCCGCTaGGGTCCCGGTGAAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DAANKREEVDQRLSGKGILHQAR*GPGETT Trigger: GGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAG...TATCCCCTTCCCAGACAACCTTTGATCCACTTCCTCTCTTTTATTTGCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
||
| CDS-3UTR TCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTATCATCCACCCTGACTaGGAGGGAGAAGTCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLIIHPD*EGEVTL Trigger: CAGGGTGACTTCTCCCTCTCAGTCAGGGTGGATGAT...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | AATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTAATCATCCACCCTGACTaGGAGGGAGAAGTCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLFTRIEGPGSPWGLAGLIIHPD*EGEVTL Trigger: CAGGGTGACTTCTCCCTCTCAGTCAGGGTGGATGAT...TAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTGTCATAGAAGTCCCCTaGGTTCTGGATCCGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: PGSPWGLAGLYTDSDDHSVIEVP*VLDPNM Trigger: CATATTCGGATCCAGAACTCAGGGGACTTCTATGAC...ACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGTCTGCCAGAAGTCATTaGCTGTGGCATCCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: REFIYKNRRARLSLGTCRSARSH*LWHPDS Trigger: GCTGTCTGGATGCCACAGTCAATGACTTCTGGCAGA...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTATCTGATCCAGAAAGCTaGGGACACCCCCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLSDPES*GHPQAH Trigger: GTGAGCCTGGGGGTGTCCTCAGCTTTCTGGATCAGA...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | TTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGTCTATGATGGGCCCTGCATaGGGCAAACTTTCCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LNYKKMGVVLGSGEGHRSMMGPA*GKLSCR Trigger: GCGACAGGAAAGTTTGCCTCATGCAGGGCCCATCAT...AGACCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTATGATGGGCCCTGCATaGGGCAAACTTTCCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLMMGPA*GKLSCR Trigger: GCGACAGGAAAGTTTGCCTCATGCAGGGCCCATCAT...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAATCCTTCTGGGATTGTATaGTCTCCAGTTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWKPLQGSRLMHGHLQTNPSGIV*SPVSSW Trigger: CCAAGAAGAAACTGGAGATCATACAATCCCAGAAGG...ATTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTGTGCCATCTCGGTCCTaGAGGATGCCCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSVPSRS*RMPCCC Trigger: GCAGCAGCAGGGCATCCTGCAGGACCGAGATGGCAC...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGCCTGTCTTCTTGAAGTaGTCCACCAGGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REFIYKNRRARLSLGTCRPVFLK*STRSVR Trigger: CCTCACAGACCTGGTGGAGCACTTCAAGAAGACAGG...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCTTACTGTCACGTCCCTaGAGGATCACTCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGLLSRP*RITRLW Trigger: CCACAGCCGAGTGATCCTGCAGGGACGTGACAGTAA...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | GGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTCCTGCCAAGCCATCTaGCAGAAGTCATTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPWGLAGLYTDSDDHSHSCQAI*QKSLTV Trigger: CACAGTCAATGACTTCTGGCAGATGGCTTGGCAGGA...GTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCTCGCAGTTTGTATTCTaGTGTGTCATGCTCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: KGPALPGDLPGYIQIQMTSQFVF*CVMLPT Trigger: AGTAGGGAGCATGACACAGCAGAATACAAACTGCGA...GGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GATGCTGCAAATAAAAGAGAGGAAGTGGATCAAAGGTTGTCTGGGAAGGGGATACCTGGTTCTTGCGGCTaGGCCGAGCCAGGAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAANKREEVDQRLSGKGIPGSCG*AEPGSS Trigger: GGAGCTTCCTGGCTCGGCCCAGCCGCAAGAACCAGG...TATCCCCTTCCCAGACAACCTTTGATCCACTTCCTCTCTTTTATTTGCAGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| CDS-3UTR CCA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACCTCGTACCATCTGGATaGTCTTCTGGATATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHLVPSG*SSGYQC Trigger: ACATTGATATCCAGAAGACCATCCAGATGGTACGAG...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCAGACGAATTGTGCTCGTACCATCTaGATGGTCTTCTGGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: GWKPLQGSRLMHGHLQTNCARTI*MVFWIS Trigger: TGATATCCAGAAGACCATCCAGATGGTACGAGCACA...ATTCGTCTGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SREFIYKNRRARLSLGTCPPPCA*RKYARL Trigger: AAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGG...GCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR TCA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGTCATAGAAGTCCCCTaGGTTCTGGATCCGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDVIEVP*VLDPNM Trigger: CATATTCGGATCCAGAACTCAGGGGACTTCTATGAC...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCCCTTGGGCTGGTCATTaGGCACAGAGAGCACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLAPWAGH*AQRAQN Trigger: ATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGG...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | TGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTCTGCCAGAAGTCATTaGCTGTGGCATCCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSREFIYKNRRARLSLGTSARSH*LWHPDS Trigger: GCTGTCTGGATGCCACAGTCAATGACTTCTGGCAGA...AGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | CACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGTGTCGCTGGTTGATCTaGTCCAGAAAGCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLNYKKMGVVLGSGEGHRCRWLI*SRKLRT Trigger: TGTCCTCAGCTTTCTGGATCAGATCAACCAGCGACA...CCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATACCTGTCTTCTTGAAGTaGTCCACCAGGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIYKNRRARLSLGTCRAIPVFLK*STRSVR Trigger: CCTCACAGACCTGGTGGAGCACTTCAAGAAGACAGG...TATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGTCCTGCCAAGCCATCTaGCAGAAGTCATTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REFIYKNRRARLSLGTCRSCQAI*QKSLTV Trigger: CACAGTCAATGACTTCTGGCAGATGGCTTGGCAGGA...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCTCCTGCCAAGCCATCTaGCAGAAGTCATTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLASCQAI*QKSLTV Trigger: CACAGTCAATGACTTCTGGCAGATGGCTTGGCAGGA...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCACACGAGTGTTCTCCTaGCAAGCCATCTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGTRVFS*QAICQK Trigger: CTTCTGGCAGATGGCTTGGCAGGAGAACACTCGTGT...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATAACACGAGTGTTCTCCTaGCAAGCCATCTGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIYKNRRARLSLGTCRAITRVFS*QAICQK Trigger: CTTCTGGCAGATGGCTTGGCAGGAGAACACTCGTGT...TATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | TTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACACACAATGATGGGCCCTaGATGAGGCAAACTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FTRIEGPGSPWGLAGLYTHNDGP*MRQTFL Trigger: CAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTG...TGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | ATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCCATGCCGGAGCGCTGTaGTCGTACCATCTGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: IHSGPGNLFTRIEGPGSPHAGAL*SYHLDG Trigger: ACCATCCAGATGGTACGAGCACAGCGCTCCGGCATG...GGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGAGTCCGAGCAGTTCAGTaGGTACTTAAGGTGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRRARLSLGTCRAIYRFRVRAVQ*VLKVDD Trigger: ATCATCCACCTTAAGTACCCACTGAACTGCTCGGAC...TCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | ACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATAGGATCACTCGGCTGTaGTCAAAGGGAAGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRIEGPGSPWGLAGLYTDRITRL*SKGRMF Trigger: GAACATTCTTCCCTTTGACCACAGCCGAGTGATCCT...ATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | ATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCCACCTCGGGCCAGTATaGGACACATTTGTTCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHSGPGNLFTRIEGPGSPHLGPV*DTFVPA Trigger: GGCCGGAACAAATGTGTCCCATACTGGCCCGAGGTG...GGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | ACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATCATGCTCCCTACTGTTaGTCACAGAGTAGAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRIEGPGSPWGLAGLYTDHAPYC*SQSRDH Trigger: ATGGTCTCTACTCTGTGACCAACAGTAGGGAGCATG...ATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCTCGTACCATCTGGATaGTCTTCTGGATATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EGPGSPWGLAGLYTDSDDLVPSG*SSGYQC Trigger: ACATTGATATCCAGAAGACCATCCAGATGGTACGAG...GTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTCCATACTCCGACTCCTaGCCCTTCTGGGATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WSREFIYKNRRARLSLGTPYSDS*PFWDCM Trigger: CATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGG...AGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTCCATACTCCGACTCCTaGCCCTTCTGGGATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLPYSDS*PFWDCM Trigger: CATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGG...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCACATAACCTTGATATaGGTGACCCTGAGCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SREFIYKNRRARLSLGTCHITLI*VTLSGE Trigger: TTCCCCGCTCAGGGTCACTCATATCAAGGTTATGTG...GCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCGCTGCAATGCACAATaGTGGGCCCTGCATGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSRCNAQ*WALHEA Trigger: TGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCG...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATATTCTCAATGTCAGCTaGGTTTACCCGAGTAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRIEGPGSPWGLAGLYTDILNVS*VYPSSV Trigger: TACGCTACTCGGGTAAACGCAGCTGACATTGAGAAT...ATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGATTCTCAATGTCAGCTaGGTTTACCCGAGTAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNLFTRIEGPGSPWGLAGILNVS*VYPSSV Trigger: TACGCTACTCGGGTAAACGCAGCTGACATTGAGAAT...CCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTGTGTCCTCCGACTCCTaGTTCTTGTTCAGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSREFIYKNRRARLSLGTVSSDS*FLFSSK Trigger: CTTGGAACTGAACAAGAAGCAGGAGTCGGAGGACAC...AGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTTGTTCTCTGGCCGCTaGCCTTCCAGACGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNTQWSREFIYKNRRARLLFSGR*PSRRWC Trigger: ACACCAACGTCTGGAAGGGCAGCGGCCAGAGAACAA...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR GCA 90 bp | CTGATGCTGCAAATAAAAGAGAGGAAGTGGATCAAAGGTTGTCTGGGAAGGGGACATAGACACGCTGAGTaGCCACCTCGGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LMLQIKERKWIKGCLGRGHRHAE*PPRASM Trigger: CATACTGGCCCGAGGTGGGCACTCAGCGTGTCTATG...TCCCCTTCCCAGACAACCTTTGATCCACTTCCTCTCTTTTATTTGCAGCATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
||
| CDS-3UTR GCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCTTCTTGCTCTTGCTATaGACGTTTTCGTACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFFLLLL*TFSYTS Trigger: GGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGAA...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGTCCGAGCAGTTCAGTaGGTACTTAAGGTGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGNLFTRIEGPGSPWGLAVRAVQ*VLKVDD Trigger: ATCATCCACCTTAAGTACCCACTGAACTGCTCGGAC...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACGTCCGAGCAGTTCAGTaGGTACTTAAGGTGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: IYKNRRARLSLGTCRAIYVRAVQ*VLKVDD Trigger: ATCATCCACCTTAAGTACCCACTGAACTGCTCGGAC...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTACCACCTCTCACTGGTaGGGTCCGAGCAGTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSTTSHW*GPSSSV Trigger: CACTGAACTGCTCGGACCCCACCAGTGAGAGGTGGT...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACACAAAATCACCAGGTTaGCTGAGACTCTCACGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IYKNRRARLSLGTCRAIYTKSPG*LRLSRT Trigger: TGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGT...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGAGGATCACTCGGCTGTaGTCAAAGGGAAGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: REFIYKNRRARLSLGTCRRITRL*SKGRMF Trigger: GAACATTCTTCCCTTTGACCACAGCCGAGTGATCCT...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | TTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATGTCATAGAAGTCCCCTaGGTTCTGGATCCGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: LFTRIEGPGSPWGLAGLYVIEVP*VLDPNM Trigger: CATATTCGGATCCAGAACTCAGGGGACTTCTATGAC...ATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGCCTTCTGGGATTGTATaGTCTCCAGTTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: REFIYKNRRARLSLGTCRPSGIV*SPVSSW Trigger: CCAAGAAGAAACTGGAGATCATACAATCCCAGAAGG...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR TCA 90 bp | TTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGTCTTGCAGGGATCAAGGCTaGTGCTTTGTTCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNYKKMGVVLGSGEGHRSCRDQG*CFVLLL Trigger: AAGGAGAAGAACAAAGCATCAGCCTTGATCCCTGCA...AGACCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173315.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTAGTGTCCTCCGACTCCTaGTTCTTGTTCAGTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLVSSDS*FLFSSK Trigger: CTTGGAACTGAACAAGAAGCAGGAGTCGGAGGACAC...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTCGCAGTTTGTATTCTaGTGTGTCATGCTCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: ALPGDLPGYIQIQMTTVTSQFVF*CVMLPT Trigger: AGTAGGGAGCATGACACAGCAGAATACAAACTGCGA...AGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | CACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGTTCTTGCTCTTGCTATaGACGTTTTCGTACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLNYKKMGVVLGSGEGHRFLLLL*TFSYTS Trigger: GGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGAA...CCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR CCA 90 bp | GATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTGCCCTCCAGATATGTaGCCGTGGTACCACCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DSDDHSHLNYKKMGVVLGCPPDM*PWYHLS Trigger: TGAGAGGTGGTACCACGGCCACATATCTGGAGGGCA...CCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAAAATCACCAGGTTaGCTGAGACTCTCACGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LFTRIEGPGSPWGLAGLYTKSPG*LRLSRT Trigger: TGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGT...ATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCTGCCCTTCCAGACGTTaGTGTAGATTCTTTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SREFIYKNRRARLSLGTCCPSRR*CRFFTS Trigger: GGAGGTAAAGAATCTACACCAACGTCTGGAAGGGCA...GCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTTGCCCTTCCAGACGTTaGTGTAGATTCTTTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLCPSRR*CRFFTS Trigger: GGAGGTAAAGAATCTACACCAACGTCTGGAAGGGCA...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTAGATGTAGTCAGAGCCTaGGATGTTACTGTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLDVVRA*DVTVTS Trigger: GGACGTGACAGTAACATCCCAGGCTCTGACTACATC...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTATCTGGATGGTCTTCTaGATATCAATGTCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSPWGLAGLYTDSDDHSIWMVF*ISMSQS Trigger: AGACTGTGACATTGATATCCAGAAGACCATCCAGAT...ACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSPPPCA*RKYARL Trigger: AAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGG...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTCCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSPPPCA*RKYARL Trigger: AAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGG...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATACCTTCTGGGATTGTATaGTCTCCAGTTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIYKNRRARLSLGTCRAIPSGIV*SPVSSW Trigger: CCAAGAAGAAACTGGAGATCATACAATCCCAGAAGG...TATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR GCA 90 bp | AAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCCTTTCTCTTCCTTCTTaGTCTTGCTATGCACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNRRARLSLGTCRAIYRFLSLPS*SCYARF Trigger: AAAACGTGCATAGCAAGAGCAAGAAGGAAGAGAAAG...GAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR CCA 90 bp | GGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGGGCCAGCCTTGGGCTaGTCATTGAGCACAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLYTDSDDHSHLNYKKMGGPALG*SLSTES Trigger: GCTCTCTGTGCTCAATGACCAGCCCAAGGCTGGCCC...CCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAAGTGGATCAAAGGTTGTCTGGGAAGGGGATACAAGAGCTAGGGACAAGGATCACTCGGCTGTaGTCAAAGGGAAGAATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: REEVDQRLSGKGIQELGTRITRL*SKGRMF Trigger: GAACATTCTTCCCTTTGACCACAGCCGAGTGATCCT...TGTCCCTAGCTCTTGTATCCCCTTCCCAGACAACCTTTGATCCACTTCCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
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| CDS-3UTR CCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTTGTGCTCGTACCATCTaGATGGTCTTCTGGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLCARTI*MVFWIS Trigger: TGATATCCAGAAGACCATCCAGATGGTACGAGCACA...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | GATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGCCATACTCCGACTCCTaGCCCTTCTGGGATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: DSDDHSHLNYKKMGVVLGPYSDS*PFWDCM Trigger: CATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGG...CCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR TCA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTAATCACCAGGTTGGCTaGGACTCTCACGCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSNHQVG*DSHAQE Trigger: TTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATT...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTAATCACCAGGTTGGCTaGGACTCTCACGCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSNHQVG*DSHAQE Trigger: TTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATT...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTCACATAACCTTGATATaGGTGACCCTGAGCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSHITLI*VTLSGE Trigger: TTCCCCGCTCAGGGTCACTCATATCAAGGTTATGTG...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR TCA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTTGTCGCTGGTTGATCTaGTCCAGAAAGCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSCRWLI*SRKLRT Trigger: TGTCCTCAGCTTTCTGGATCAGATCAACCAGCGACA...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGGGCCAGCCTTGGGCTaGTCATTGAGCACAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVGPALG*SLSTES Trigger: GCTCTCTGTGCTCAATGACCAGCCCAAGGCTGGCCC...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTGATGTAGTCAGAGCCTaGGATGTTACTGTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSDVVRA*DVTVTS Trigger: GGACGTGACAGTAACATCCCAGGCTCTGACTACATC...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCCATGCTCCCTACTGTTaGTCACAGAGTAGAGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNTQWSREFIYKNRRARLHAPYC*SQSRDH Trigger: ATGGTCTCTACTCTGTGACCAACAGTAGGGAGCATG...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | TTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAATCTGGATGGTCTTCTaGATATCAATGTCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTRIEGPGSPWGLAGLYTIWMVF*ISMSQS Trigger: AGACTGTGACATTGATATCCAGAAGACCATCCAGAT...TGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCATTCTCAATGTCAGCTaGGTTTACCCGAGTAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GNTQWSREFIYKNRRARLILNVS*VYPSSV Trigger: TACGCTACTCGGGTAAACGCAGCTGACATTGAGAAT...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTCGCAGTTTGTATTCTaGTGTGTCATGCTCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: PWGLAGLYTDSDDHSHLNSQFVF*CVMLPT Trigger: AGTAGGGAGCATGACACAGCAGAATACAAACTGCGA...ATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTCTTTCTCTTCCTTCTTaGTCTTGCTATGCACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPGNLFTRIEGPGSPWGLLSLPS*SCYARF Trigger: AAAACGTGCATAGCAAGAGCAAGAAGGAAGAGAAAG...AAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR CCA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTACAAAATCACCAGGTTaGCTGAGACTCTCACGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSTKSPG*LRLSRT Trigger: TGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGT...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | TTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCACAGGTCTATCTGGATGGTCTTCTaGATATCAATGTCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNYKKMGVVLGSGEGHRSIWMVF*ISMSQS Trigger: AGACTGTGACATTGATATCCAGAAGACCATCCAGAT...AGACCTGTGGCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGTCTGCCAGAAGTCATTaGCTGTGGCATCCAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLYTDSDDHSHLNYKKMGSARSH*LWHPDS Trigger: GCTGTCTGGATGCCACAGTCAATGACTTCTGGCAGA...CCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | GATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGCCTTCTGGGATTGTATaGTCTCCAGTTTCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSDDHSHLNYKKMGVVLGPSGIV*SPVSSW Trigger: CCAAGAAGAAACTGGAGATCATACAATCCCAGAAGG...CCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGCCTGTCTTCTTGAAGTaGTCCACCAGGTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLYTDSDDHSHLNYKKMGPVFLK*STRSVR Trigger: CCTCACAGACCTGGTGGAGCACTTCAAGAAGACAGG...CCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTTTCTTGCTCTTGCTATaGACGTTTTCGTACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSFLLLL*TFSYTS Trigger: GGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGAA...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTACTTTCTCTTCCTTCTTaGTCTTGCTATGCACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPWGLAGLYTDSDDHSHLLSLPS*SCYARF Trigger: AAAACGTGCATAGCAAGAGCAAGAAGGAAGAGAAAG...TAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTGCAAATAAAAGAGAGGAAGTGGATCAAAGGTTGTCTGGGAAGGGGATATTCTTGCTCTTGCTATaGACGTTTTCGTACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAANKREEVDQRLSGKGIFLLLL*TFSYTS Trigger: GGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGAA...TATCCCCTTCCCAGACAACCTTTGATCCACTTCCTCTCTTTTATTTGCAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
||
| CDS-3UTR GCA 90 bp | ATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCCTTTCTCTTCCTTCTTaGTCTTGCTATGCACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHSGPGNLFTRIEGPGSPLSLPS*SCYARF Trigger: AAAACGTGCATAGCAAGAGCAAGAAGGAAGAGAAAG...GGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | GGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGATGTAGTCAGAGCCTaGGATGTTACTGTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLYTDSDDHSHLNYKKMGDVVRA*DVTVTS Trigger: GGACGTGACAGTAACATCCCAGGCTCTGACTACATC...CCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGAATCACCAGGTTGGCTaGGACTCTCACGCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVNHQVG*DSHAQE Trigger: TTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATT...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR TCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGTGTCGCTGGTTGATCTaGTCCAGAAAGCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVCRWLI*SRKLRT Trigger: TGTCCTCAGCTTTCTGGATCAGATCAACCAGCGACA...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGTGCCCTTCCAGACGTTaGTGTAGATTCTTTACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVCPSRR*CRFFTS Trigger: GGAGGTAAAGAATCTACACCAACGTCTGGAAGGGCA...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGTGTGCTCGTACCATCTaGATGGTCTTCTGGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVCARTI*MVFWIS Trigger: TGATATCCAGAAGACCATCCAGATGGTACGAGCACA...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CCA 90 bp | CTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGCTCGTACCATCTGGATaGTCTTCTGGATATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYTDSDDHSHLNYKKMGVLVPSG*SSGYQC Trigger: ACATTGATATCCAGAAGACCATCCAGATGGTACGAG...CACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS GCA 90 bp | AGCCAGGAAGCTCCCAGGGACTCCCCGGCCCTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTCCCGGTGAAACCACCCGCGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SQEAPRDSPALQQGL*IRPAEVPVKPPAGQ Trigger: TTGTCCCGCGGGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAGGGCCGGGGAGTCCCTGGGAGCTTCCTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004377.15 ENSMUST00000171549.9 |
||
| CDS GCA 90 bp | AGAAATGTCCAGGGCTCGCCCTTGGCCTGCAGCAGTGACTCCGCCTaGCCTCCAGATATGTGGCCGTGGTACCACCTCTCACTGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RNVQGSPLACSSDSA*PPDMWPWYHLSLVG Trigger: CCCCACCAGTGAGAGGTGGTACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAAGTCACCCTGGTTCTaGCGGCTGGGCCGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPGSPWGLAGLYTDSDDHKSPWF*RLGRAR Trigger: CCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACTT...GTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS TCA 90 bp | CTCACGCACAAGAAATGTCCAGGGCTCGCCCTTGGCCTGCAGCAGTaGCTCCGCCTGCCCTCCAGATATGTGGCCGTGGTACCACCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTHKKCPGLALGLQQ*LRLPSRYVAVVPPL Trigger: GAGAGGTGGTACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCTTGTGCGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | CCGTGCCATGCACGCACGTCTGAACTGAAGTTGGGGAAATGGGGGCAGGGAGAGTCCCAGAAGCCAGCCTaGGCTGTGTCCTCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PCHARTSELKLGKWGQGESQKPA*AVSSDS Trigger: GGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGGA...CTCTCCCTGCCCCCATTTCCCCAACTTCAGTTCAGACGTGCGTGCATGGCACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004377.15 |
||
| CDS GCA 90 bp | CTGAGACTCTCACGCACAAGAAATGTCCAGGGCTCGCCCTTGGCCTaGAGCAGTGACTCCGCCTGCCCTCCAGATATGTGGCCGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRLSRTRNVQGSPLA*SSDSACPPDMWPWY Trigger: GTACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCTTGTGCGTGAGAGTCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS CCA 90 bp | CACCTCTCACTGGTGGGGTCCGAGCAGTTCAGTGGGTACTTAAGGTaGATGATGGTGCCATCTCGGTCCTGCAGGATGCCCTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLSLVGSEQFSGYLR*MMVPSRSCRMPCCC Trigger: GCAGCAGCAGGGCATCCTGCAGGACCGAGATGGCACCATCATCCACCTTAAGTACCCACTGAACTGCTCGGACCCCACCAGTGAGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS CCA 90 bp | GTGGCCGTGGTACCACCTCTCACTGGTGGGGTCCGAGCAGTTCAGTaGGTACTTAAGGTGGATGATGGTGCCATCTCGGTCCTGCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VAVVPPLTGGVRAVQ*VLKVDDGAISVLQD Trigger: ATCCTGCAGGACCGAGATGGCACCATCATCCACCTTAAGTACCCACTGAACTGCTCGGACCCCACCAGTGAGAGGTGGTACCACGGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | GGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGTCCCAGAAGCCAGCCTaGGCTGTGTCCTCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNLFTRIEGPGSPWGLAGSQKPA*AVSSDS Trigger: GGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGGA...CCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS GCA 90 bp | GCCCGTGCGGCCGATGCCAGCGCTGCAATGCACAATGATGGGCCCTaGATGAGGCAAACTTTCCTGTCGCTGGTTGATCTGATCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ARAADASAAMHNDGP*MRQTFLSLVDLIQK Trigger: TTTCTGGATCAGATCAACCAGCGACAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCGCTGGCATCGGCCGCACGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | CACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGAAGTCACCCTGGTTCTaGCGGCTGGGCCGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSGPGNLFTRIEGPGSPWKSPWF*RLGRAR Trigger: CCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACTT...CCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS CCA 90 bp | TCTTGCTCTTGCTATGCACGTTTTCGTACACCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTTTGGCGTGGGCACTCCTCACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSCYARFRTPPPCA*RKYARLWRGHSSQR Trigger: CCGCTGTGAGGAGTGCCCACGCCAAAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCGTCCAGGGCTCGCCCTaGGCCTGCAGCAGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNTQWSREFIYKNRRARLVQGSP*ACSSDS Trigger: GGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGAC...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS GCA 90 bp | GCTCCCTACTGTTGGTCACAGAGTAGAGACCATAGACACGCTGAGTaGCCACCTCGGGCCAGTATGGGACACATTTGTTCCGGCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: APYCWSQSRDHRHAE*PPRASMGHICSGLS Trigger: AGAAAGGCCGGAACAAATGTGTCCCATACTGGCCCGAGGTGGGCACTCAGCGTGTCTATGGTCTCTACTCTGTGACCAACAGTAGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS CCA 90 bp | GCCTTGGGCTGGTCATTGAGCACAGAGAGCACAAAATCACCAGGTTaGCTGAGACTCTCACGCACAAGAAATGTCCAGGGCTCGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGWSLSTESTKSPG*LRLSRTRNVQGSPL Trigger: CAAGGGCGAGCCCTGGACATTTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | ATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCAAGTCACCCTGGTTCTaGCGGCTGGGCCGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHSGPGNLFTRIEGPGSPKSPWF*RLGRAR Trigger: CCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACTT...GGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTGTCCAGGGCTCGCCCTaGGCCTGCAGCAGTGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSVQGSP*ACSSDS Trigger: GGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGAC...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | ATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGCTTTGTTCTTCTCCTaGTCTGCCGACCGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IEGPGSPWGLAGLYTDSDALFFS*SADRCF Trigger: GAAGCAGCGGTCGGCAGACAAGGAGAAGAACAAAGC...ATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173315.8 |
||
| CDS CCA 90 bp | ACCCTCACACATAACCTTGATATGAGTGACCCTGAGCGGGGAACCTaGGCCAGCCTTGGGCTGGTCATTGAGCACAGAGAGCACAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: TLTHNLDMSDPERGT*ASLGLVIEHREHKI Trigger: GATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGCTGGCCCAGGTTCCCCGCTCAGGGTCACTCATATCAAGGTTATGTGTGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS CCA 90 bp | TGCACCATGCCGGAGCGCTGTGCTCGTACCATCTGGATGGTCTTCTaGATATCAATGTCACAGTCTAGCCCCTTGGTGGAGATGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CTMPERCARTIWMVF*ISMSQSSPLVEMLS Trigger: GGAAAGCATCTCCACCAAGGGGCTAGACTGTGACATTGATATCCAGAAGACCATCCAGATGGTACGAGCACAGCGCTCCGGCATGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | AATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGACACAAAATCACCAGGTaGGCTGAGACTCTCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NRRARLSLGTCRAIYRFRHKITR*AETLTH Trigger: GTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTG...TCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGCCTTTGTTCTTCTCCTaGTCTGCCGACCGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: REFIYKNRRARLSLGTCRPLFFS*SADRCF Trigger: GAAGCAGCGGTCGGCAGACAAGGAGAAGAACAAAGG...CCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | ATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACGCCTTGGGCTGGTCATaGAGCACAGAGAGCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IYKNRRARLSLGTCRAIYALGWS*STESTK Trigger: TTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGC...GTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTTCCCAGAAGCCAGCCTaGGCTGTGTCCTCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSSQKPA*AVSSDS Trigger: GGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGGA...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | TTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACACAGTATGGGACACATTaGTTCCGGCCTTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FTRIEGPGSPWGLAGLYTQYGTH*FRPFST Trigger: GGTGGAGAAAGGCCGGAACAAATGTGTCCCATACTG...TGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | GAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACTCTTCCTTCTTGCTCTaGCTATGCACGTTTTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: EGPGSPWGLAGLYTDSDDSSFLL*LCTFSY Trigger: GTACGAAAACGTGCATAGCAAGAGCAAGAAGGAAGA...GTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCCTTTGTTCTTCTCCTaGTCTGCCGACCGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGPLFFS*SADRCF Trigger: GAAGCAGCGGTCGGCAGACAAGGAGAAGAACAAAGG...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS TCA 90 bp | CTTCTTGAAGTGCTCCACCAGGTCTGTGAGGCTGTCAAACGTCTCTaGGCCACCCACAGTATAGCGTCCACCCTCACACATAACCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLEVLHQVCEAVKRL*ATHSIASTLTHNLD Trigger: ATCAAGGTTATGTGTGAGGGTGGACGCTATACTGTGGGTGGCTCAGAGACGTTTGACAGCCTCACAGACCTGGTGGAGCACTTCAAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
||
| CDS-3UTR CAA 90 bp | AATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTACACAAAATCACCAGGTaGGCTGAGACTCTCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLFTRIEGPGSPWGLAGLHKITR*AETLTH Trigger: GTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTG...TAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | TCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCACAAAATCACCAGGTaGGCTGAGACTCTCACGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SREFIYKNRRARLSLGTCHKITR*AETLTH Trigger: GTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTG...GCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCGCCTTGGGCTGGTCATaGAGCACAGAGAGCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGALGWS*STESTK Trigger: TTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGC...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | AGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACAGTATGGGACACATTaGTTCCGGCCTTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SGPGNLFTRIEGPGSPWGQYGTH*FRPFST Trigger: GGTGGAGAAAGGCCGGAACAAATGTGTCCCATACTG...TCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | GTCTATCGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTGCATGTAATGTTCGCAGTTaGTATTCTGCTGTGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VYRVEASAGIKADAWPPACNVRS*YSAVSC Trigger: GCATGACACAGCAGAATACAAACTGCGAACATTACA...TGCAGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | CCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCTCACAGTCTAGCCCCTaGGTGGAGATGCTTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PGNLFTRIEGPGSPWGLASQSSP*VEMLSI Trigger: TATGGAAAGCATCTCCACCAAGGGGCTAGACTGTGA...GGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS GCA 90 bp | CTCCTGCTTCTTGTTCAGTTCCAAGACCCGATTCTCAATGTCAGCTaGGTTTACCCGAGTAGCGTAGTAAGGCTGCCGCAGGTAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLVQFQDPILNVS*VYPSSVVRLPQVDK Trigger: TTTGTCTACCTGCGGCAGCCTTACTACGCTACTCGGGTAAACGCAGCTGACATTGAGAATCGGGTCTTGGAACTGAACAAGAAGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 90 bp | GTAATGTTCGCAGTTTGTATTCTGCTGTGTCATGCTCCCTACTGTTaGTCACAGAGTAGAGACCATAGACACGCTGAGTGCCCACCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VMFAVCILLCHAPYC*SQSRDHRHAECPPR Trigger: CCGAGGTGGGCACTCAGCGTGTCTATGGTCTCTACTCTGTGACCAACAGTAGGGAGCATGACACAGCAGAATACAAACTGCGAACATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 90 bp | GCGGGAGGGTACGTGATATTCCCATACTCCGACTCCTGGCCCTTCTaGGATTGTATGATCTCCAGTTTCTTCTTGGTCGTTTCGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AGGYVIFPYSDSWPF*DCMISSFFLVVSMN Trigger: GTTCATCGAAACGACCAAGAAGAAACTGGAGATCATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGGGAATATCACGTACCCTCCCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS-3UTR CAA 90 bp | TCAGTCTATCGGGTGGAAGCCTCTGCAGGGATCAAGGCTGATGCATGGCCACCTTGTAATGTTCGCAGTTaGTATTCTGCTGTGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SVYRVEASAGIKADAWPPCNVRS*YSAVSC Trigger: GCATGACACAGCAGAATACAAACTGCGAACATTACA...AGGTGGCCATGCATCAGCCTTGATCCCTGCAGAGGCTTCCACCCGATAGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTATCAAGGCTGATGCTTaGTTCTTCTCCTTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALPGDLPGYIQIQMTTVTIKADA*FFSLSA Trigger: GGCAGACAAGGAGAAGAACAAAGCATCAGCCTTGAT...AGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173315.8 |
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| CDS-3UTR CAA 90 bp | ATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCGCCTTGGGCTGGTCATaGAGCACAGAGAGCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHSGPGNLFTRIEGPGSPALGWS*STESTK Trigger: TTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGC...GGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | GCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCTTTGTTCTTCTCCTaGTCTGCCGACCGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AIHSGPGNLFTRIEGPGSPLFFS*SADRCF Trigger: GAAGCAGCGGTCGGCAGACAAGGAGAAGAACAAAGG...AGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | CACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTGGTGAGGGCCTCTTGAGAGAACCTTaGTTCTTCTCCTTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSHLNYKKMGVVLGSGEGLLREP*FFSLSA Trigger: GGCAGACAAGGAGAAGAACAAAGGTTCTCTCAAGAG...GCCCTCACCAGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | TGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTCTCTTGAGAGAACCTTaGTTCTTCTCCTTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSREFIYKNRRARLSLGTLLREP*FFSLSA Trigger: GGCAGACAAGGAGAAGAACAAAGGTTCTCTCAAGAG...AGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
||
| CDS-3UTR CAA 90 bp | CACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGCTCTTGAGAGAACCTTaGTTCTTCTCCTTGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGPGNLFTRIEGPGSPWLLREP*FFSLSA Trigger: GGCAGACAAGGAGAAGAACAAAGGTTCTCTCAAGAG...CCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | CCCTGGGGACTTGCCGGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTCACAGTCTAGCCCCTaGGTGGAGATGCTTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PWGLAGLYTDSDDHSHLNSQSSP*VEMLSI Trigger: TATGGAAAGCATCTCCACCAAGGGGCTAGACTGTGA...ATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCCGGCAAGTCCCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | GGCAATACACAGTGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCACAGTCTAGCCCCTaGGTGGAGATGCTTTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GNTQWSREFIYKNRRARLSQSSP*VEMLSI Trigger: TATGGAAAGCATCTCCACCAAGGGGCTAGACTGTGA...GAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCACTGTGTATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | TTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTGCCGGGCTATATCTTCCTTCTTGCTCTaGCTATGCACGTTTTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FIYKNRRARLSLGTCRAISSFLL*LCTFSY Trigger: GTACGAAAACGTGCATAGCAAGAGCAAGAAGGAAGA...TATAGCCCGGCAAGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR CAA 90 bp | TGGTCCAGGGAATTTATTTACAAGAATAGAAGGGCCCGGCTCTCCCTGGGGACTTCTTCCTTCTTGCTCTaGCTATGCACGTTTTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WSREFIYKNRRARLSLGTSSFLL*LCTFSY Trigger: GTACGAAAACGTGCATAGCAAGAGCAAGAAGGAAGA...AGTCCCCAGGGAGAGCCGGGCCCTTCTATTCTTGTAAATAAATTCCCTGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 |
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| CDS-3UTR CAA 90 bp | GGGCTATATACAGATTCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGCAGTATGGGACACATTaGTTCCGGCCTTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLYTDSDDHSHLNYKKMGQYGTH*FRPFST Trigger: GGTGGAGAAAGGCCGGAACAAATGTGTCCCATACTG...CCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGAATCTGTATATAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS-3UTR CAA 90 bp | TCAGATGACCACAGTCACTTAAATTACAAGAAGATGGGGGTGGTCCTAGGGTCTTGTAATGTTCGCAGTTaGTATTCTGCTGTGTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SDDHSHLNYKKMGVVLGSCNVRS*YSAVSC Trigger: GCATGACACAGCAGAATACAAACTGCGAACATTACA...AGACCCTAGGACCACCCCCATCTTCTTGTAATTTAAGTGACTGTGGTCATCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS GCA 72 bp | GCTCCCAGGGACTCCCCGGCCCTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTCCCGGTGAAACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: APRDSPALQQGL*IRPAEVPVKPP Trigger: GGGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAGGGCCGGGGAGTCCCTGGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004377.15 ENSMUST00000171549.9 |
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| CDS GCA 72 bp | GCTCCCAGGGACTCCCCGGCCCTTCAGCAGGGTCTCTaGATCAGGCCCGCTGAGGTCCCGGTGAAACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: APRDSPALQQGL*IRPAEVPVKPP Trigger: AGGTGGTTTCACCGGGACCTCAGCGGGCCTGATGCAGAGACCCTGCTGAAGGGCCGGGGAGTCCCTGGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112484.10 ENSMUST00000173647.2 |
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| CDS CCA 72 bp | CGTACAGGTCATAGAAGTCCCCCTGGTTCTTGCGGCTaGGCCGAGCCAGGAAGCTCCCAGGGACTCCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTGHRSPPGSCG*AEPGSSQGLPG Trigger: GCCGGGGAGTCCCTGGGAGCTTCCTGGCTCGGCCCAGCCGCAAGAACCAGGGGGACTTCTATGACCTGTACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173647.2 |
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| CDS CCA 72 bp | GCCTGCAGCAGTGACTCCGCCTGCCCTCCAGATATGTaGCCGTGGTACCACCTCTCACTGGTGGGGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: ACSSDSACPPDM*PWYHLSLVGSE Trigger: CTCGGACCCCACCAGTGAGAGGTGGTACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CAA 72 bp | TCCACCCTGACTGAGAGGGAGAAGTCACCCTGGTTCTaGCGGCTGGGCCGAGCCAGGAAGCTCCCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: STLTEREKSPWF*RLGRARKLPGT Trigger: AGTCCCTGGGAGCTTCCTGGCTCGGCCCAGCCGCAAGAACCAGGGTGACTTCTCCCTCTCAGTCAGGGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 |
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| CDS CCA 72 bp | AGCAGTGACTCCGCCTGCCCTCCAGATATGTGGCCGTaGTACCACCTCTCACTGGTGGGGTCCGAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSDSACPPDMWP*YHLSLVGSEQF Trigger: GAACTGCTCGGACCCCACCAGTGAGAGGTGGTACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS TCA 72 bp | AAGAAATGTCCAGGGCTCGCCCTTGGCCTGCAGCAGTaGCTCCGCCTGCCCTCCAGATATGTGGCCGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KKCPGLALGLQQ*LRLPSRYVAVV Trigger: TACCACGGCCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS TCA 72 bp | TGCCCGTGCGGCCGATGCCAGCGCTGCAATGCACAATaGTGGGCCCTGCATGAGGCAAACTTTCCTGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPCGRCQRCNAQ*WALHEANFPVA Trigger: AGCGACAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCGCTGGCATCGGCCGCACGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS TCA 72 bp | CTTTGGCGTGGGCACTCCTCACAGCGGGAGGGTACGTaGTATTCCCATACTCCGACTCCTGGCCCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWRGHSSQREGT*YSHTPTPGPSG Trigger: CCCAGAAGGGCCAGGAGTCGGAGTATGGGAATATCACGTACCCTCCCGCTGTGAGGAGTGCCCACGCCAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS GCA 72 bp | TCACGCACAAGAAATGTCCAGGGCTCGCCCTTGGCCTaGAGCAGTGACTCCGCCTGCCCTCCAGATATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRTRNVQGSPLA*SSDSACPPDMW Trigger: CCACATATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCTTGTGCGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | GACTCTCACGCACAAGAAATGTCCAGGGCTCGCCCTTaGCCTGCAGCAGTGACTCCGCCTGCCCTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: DSHAQEMSRARP*PAAVTPPALQI Trigger: TATCTGGAGGGCAGGCGGAGTCACTGCTGCAGGCCAAGGGCGAGCCCTGGACATTTCTTGTGCGTGAGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | GTGACCCTGAGCGGGGAACCTGGGCCAGCCTTGGGCTaGTCATTGAGCACAGAGAGCACAAAATCACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTLSGEPGPALG*SLSTESTKSPG Trigger: ACCTGGTGATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGCTGGCCCAGGTTCCCCGCTCAGGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CAA 90 bp | TTTTCGTACACCTCCTCCTTGTGCTTGGAGGAAGTACGCGAGGCTTaGGCGTGGGCACTCCTCACAGCGGGAGGGTACGTGATATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FSYTSSLCLEEVREA*AWALLTAGGYVIFP Trigger: TGGGAATATCACGTACCCTCCCGCTGTGAGGAGTGCCCACGCCAAAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGGTGTACGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS GCA 72 bp | GCCGATGCCAGCGCTGCAATGCACAATGATGGGCCCTaGATGAGGCAAACTTTCCTGTCGCTGGTTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ADASAAMHNDGP*MRQTFLSLVDL Trigger: CAGATCAACCAGCGACAGGAAAGTTTGCCTCATGCAGGGCCCATCATTGTGCATTGCAGCGCTGGCATCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | GTACCACCTCTCACTGGTGGGGTCCGAGCAGTTCAGTaGGTACTTAAGGTGGATGATGGTGCCATCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPPLTGGVRAVQ*VLKVDDGAISV Trigger: GACCGAGATGGCACCATCATCCACCTTAAGTACCCACTGAACTGCTCGGACCCCACCAGTGAGAGGTGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | TGCTATGCACGTTTTCGTACACCTCCTCCTTGTGCTTaGAGGAAGTACGCGAGGCTTTGGCGTGGGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: CYARFRTPPPCA*RKYARLWRGHS Trigger: GGAGTGCCCACGCCAAAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGGTGTACGAAAACGTGCATAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS CAA 90 bp | TTCTTGCTCTTGCTATGCACGTTTTCGTACACCTCCTCCTTGTGCTaGGAGGAAGTACGCGAGGCTTTGGCGTGGGCACTCCTCACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLLLLCTFSYTSSLC*EEVREALAWALLTA Trigger: CGCTGTGAGGAGTGCCCACGCCAAAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGGTGTACGAAAACGTGCATAGCAAGAGCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | CCGGAGCGCTGTGCTCGTACCATCTGGATGGTCTTCTaGATATCAATGTCACAGTCTAGCCCCTTGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PERCARTIWMVF*ISMSQSSPLVE Trigger: CTCCACCAAGGGGCTAGACTGTGACATTGATATCCAGAAGACCATCCAGATGGTACGAGCACAGCGCTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | GCACCATGCCGGAGCGCTGTGCTCGTACCATCTGGATaGTCTTCTGGATATCAATGTCACAGTCTAGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: APCRSAVLVPSG*SSGYQCHSLAP Trigger: AGGGGCTAGACTGTGACATTGATATCCAGAAGACCATCCAGATGGTACGAGCACAGCGCTCCGGCATGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CAA 72 bp | TTGCTATGCACGTTTTCGTACACCTCCTCCTTGTGCTaGGAGGAAGTACGCGAGGCTTTGGCGTGGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LLCTFSYTSSLC*EEVREALAWAL Trigger: GAGTGCCCACGCCAAAGCCTCGCGTACTTCCTCCAAGCACAAGGAGGAGGTGTACGAAAACGTGCATAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS CAA 90 bp | AGCCTTGGGCTGGTCATTGAGCACAGAGAGCACAAAATCACCAGGTaGGCTGAGACTCTCACGCACAAGAAATGTCCAGGGCTCGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SLGLVIEHREHKITR*AETLTHKKCPGLAL Trigger: AAGGGCGAGCCCTGGACATTTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTGCTCTCTGTGCTCAATGACCAGCCCAAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS GCA 72 bp | CTTGTTCAGTTCCAAGACCCGATTCTCAATGTCAGCTaGGTTTACCCGAGTAGCGTAGTAAGGCTGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LVQFQDPILNVS*VYPSSVVRLPQ Trigger: CTGCGGCAGCCTTACTACGCTACTCGGGTAAACGCAGCTGACATTGAGAATCGGGTCTTGGAACTGAACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CAA 72 bp | CTGGTCATTGAGCACAGAGAGCACAAAATCACCAGGTaGGCTGAGACTCTCACGCACAAGAAATGTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LVIEHREHKITR*AETLTHKKCPG Trigger: CCCTGGACATTTCTTGTGCGTGAGAGTCTCAGCCAACCTGGTGATTTTGTGCTCTCTGTGCTCAATGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CAA 72 bp | TTTTGTAGACTCTCAAACTCCTCCCAGAAGCCAGCCTaGGCTGTGTCCTCCGACTCCTGCTTCTTGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FCRLSNSSQKPA*AVSSDSCFLFS Trigger: ACTGAACAAGAAGCAGGAGTCGGAGGACACAGCCAAGGCTGGCTTCTGGGAGGAGTTTGAGAGTCTACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | TTGCTCTTGTTCTCTGGCCGCTGCCCTTCCAGACGTTaGTGTAGATTCTTTACCTCCTGCTTTTGTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: LLLFSGRCPSRR*CRFFTSCFCRL Trigger: GAGTCTACAAAAGCAGGAGGTAAAGAATCTACACCAACGTCTGGAAGGGCAGCGGCCAGAGAACAAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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| CDS CCA 72 bp | TACGTGATATTCCCATACTCCGACTCCTGGCCCTTCTaGGATTGTATGATCTCCAGTTTCTTCTTGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: YVIFPYSDSWPF*DCMISSFFLVV Trigger: AACGACCAAGAAGAAACTGGAGATCATACAATCCCAGAAGGGCCAGGAGTCGGAGTATGGGAATATCACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000173315.8 ENSMUST00000174265.2 |
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| CDS CAA 72 bp | CCATTGTCTAGTGGGGAGATCTGTAATGTTCGCAGTTaGTATTCTGCTGTGTCATGCTCCCTACTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PLSSGEICNVRS*YSAVSCSLLLV Trigger: GACCAACAGTAGGGAGCATGACACAGCAGAATACAAACTGCGAACATTACAGATCTCCCCACTAGACAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004377.15 ENSMUST00000112484.10 ENSMUST00000171549.9 ENSMUST00000174265.2 |
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