Pregenerated sensors for PTPN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030854Ensembl transcript IDs: ENSMUST00000033142.13, ENSMUST00000102626.10
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCAGTATCTCTGCCTaGGGAGCAGGGTGGGAGTCTGGTGTGGGGATGTGGGTGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LQRSQWGQRKVSISA*GAGWESGVGMWVRA Trigger: AGCCCTCACCCACATCCCCACACCAGACTCCCACCCTGCTCCCCAGGCAGAGATACTGACCTTCCTCTGGCCCCACTGGCTCCTCTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR CCA 90 bp | CACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTaGGGCCAGAGGAAGGTCAGTATCTCTGCCTGGGGAGCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: HILVAKCTLPLQRSQ*GQRKVSISAWGAGW Trigger: CCACCCTGCTCCCCAGGCAGAGATACTGACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR GCA 90 bp | CTGGGATCTCTCTGTCAACCATCATGTGCTCCCCTGCCTGGTCTCTaGCATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LGSLCQPSCAPLPGL*HPHPGSKMHSAFAE Trigger: CTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGATGGCAGAGACCAGGCAGGGGAGCACATGATGGTTGACAGAGAGATCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR GCA 90 bp | AACTGTCTTAGCTGGGATCTCTCTGTCAACCATCATGTGCTCCCCTaGCTGGTCTCTGCCATCCACATCCTGGTAGCAAAATGCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: NCLSWDLSVNHHVLP*LVSAIHILVAKCTL Trigger: CAGAGTGCATTTTGCTACCAGGATGTGGATGGCAGAGACCAGGCAGGGGAGCACATGATGGTTGACAGAGAGATCCCAGCTAAGACAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR CCA 90 bp | TCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATaGGCTCTCAACACACGCATGGACAAGGGAACACACACAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: SKITHVAKESCMPCS*ALNTRMDKGTHTEQ Trigger: TTGCTCTGTGTGTGTTCCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR CCA 90 bp | GATAGATGGACAGACAGAACACATTATGGTAGGACACTTGGGGTGTaGCATGGAAACATTTTGGACCAAGTAGCTGTGGAACCATGGTTA | + |
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Preference number: 1 (lower is better) Translates to: DRWTDRTHYGRTLGV*HGNILDQVAVEPWL Trigger: TAACCATGGTTCCACAGCTACTTGGTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR GCA 90 bp | TTTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTaGCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACG | + |
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Preference number: 1 (lower is better) Translates to: FKVSNKNTWLQDNTC*QRVMHALFMGSQHT Trigger: CGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR CAA 90 bp | CTGGTCTCTGCCATCCACATCCTGGTAGCAAAATGCACTCTGCCTTaGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCAGTATCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LVSAIHILVAKCTLP*QRSQWGQRKVSISA Trigger: GGCAGAGATACTGACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGATGGCAGAGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCGAAGGTCAGTATCTCTaGCTGGGGAGCAGGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: IHILVAKCTLPLQRSQWGEGQYL*LGSRVG Trigger: TCCCACCCTGCTCCCCAGGCAGAGATACTGACCTTC...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAGCCTGGGGAGCAGGGTaGGAGTCTGGTGTGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: PHYICPLPLQCHIDWRYSAWGAG*ESGVGM Trigger: CATCCCCACACCAGACTCCCACCCTGCTCCCCAGGC...TGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCCAGGTCTATATGGTGTaGGTCAGGCCCAGGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SPLYLSSSSPVPHRLEILQVYMV*VRPRGP Trigger: GGGGCCCCTGGGCCTGACCCACACCATATAGACCTG...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAGCCTGGGGAGCAGGGTaGGAGTCTGGTGTGGGGATG | + |
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Preference number: 2 (lower is better) Translates to: TRGSKITHVAKESCMPCSAWGAG*ESGVGM Trigger: CATCCCCACACCAGACTCCCACCCTGCTCCCCAGGC...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCCATCATGTGCTCCCCTaGCTGGTCTCTGCCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: LAVSHSDTERCLTGLELSHHVLP*LVSAIH Trigger: GTGGATGGCAGAGACCAGGCAGGGGAGCACATGATG...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCTTGGCAGTACCCAGTaGATCTCAGAGGAAGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: IHILVAKCTLPLQRSQWGLGSTQ*ISEEER Trigger: ACGCTCTTCCTCTGAGATCCACTGGGTACTGCCAAG...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCCCCAAGGCAAGATCTTaGGTAGTTGGGGTAAAGACC | + |
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Preference number: 2 (lower is better) Translates to: VAKCTLPLQRSQWGQRKVPKARS*VVGVKT Trigger: GGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGG...GACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGCCCTCAGGTCTATATaGTGTGGGTCAGGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHALRSI*CGSGPG Trigger: CCCTGGGCCTGACCCACACCATATAGACCTGAGGGC...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | CCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAAATGCACTCTGCCTTTaGAGAGGAGCCAGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: PHYICPLPLQCHIDWRYSNALCL*RGASGA Trigger: GGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATT...TGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATCATCATGTGCTCCCCTaGCTGGTCTCTGCCATCCAC | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHHHVLP*LVSAIH Trigger: GTGGATGGCAGAGACCAGGCAGGGGAGCACATGATG...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCAGGACACTTGGGGTGTaGCATGGAAACATTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: VAKCTLPLQRSQWGQRKVRTLGV*HGNILD Trigger: GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCT...GACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAGTCAGTATCTCTGCCTaGGGAGCAGGGTGGGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTVSISA*GAGWES Trigger: AGACTCCCACCCTGCTCCCCAGGCAGAGATACTGAC...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCTGCTCCTTTCCTGGCTaGGGGGACACAGTGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPLYLSSSSPVPHRLEILCSFPG*GDTVFG Trigger: ACCAAACACTGTGTCCCCTCAGCCAGGAAAGGAGCA...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR TCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATTGCTCCTTTCCTGGCTaGGGGGACACAGTGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHCSFPG*GDTVFG Trigger: ACCAAACACTGTGTCCCCTCAGCCAGGAAAGGAGCA...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATCTGTCAACCATCATGTaGTCCCCTGCCTGGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHLSTIM*SPAWSL Trigger: CAGAGACCAGGCAGGGGAGCACATGATGGTTGACAG...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACGCCCTCAGGTCTATATaGTGTGGGTCAGGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DRTHYGRTLGVWHGNILDALRSI*CGSGPG Trigger: CCCTGGGCCTGACCCACACCATATAGACCTGAGGGC...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATTGCAGAGGAGCCAGTaGGGCCAGAGGAAGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: TRGSKITHVAKESCMPCSLQRSQ*GQRKVS Trigger: ACTGACCTTCCTCTGGCCCCACTGGCTCCTCTGCAA...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCCAGGGCTCAGATCTTTaGGGTTCCCCACTATATCTG | + |
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Preference number: 2 (lower is better) Translates to: LAVSHSDTERCLTGLELSQGSDL*GSPLYL Trigger: CAGATATAGTGGGGAACCCCAAAGATCTGAGCCCTG...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATCCTCTTCCTCTCCAGTaGCACATAGACTGGAGATAC | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHPLPLQ*HIDWRY Trigger: GTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGG...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGGGCTCAGATCTTTaGGGTTCCCCACTATATCTG | + |
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Preference number: 2 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTQGSDL*GSPLYL Trigger: CAGATATAGTGGGGAACCCCAAAGATCTGAGCCCTG...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCTGCCCTCCCCAACTCTaGAGTATATACAGTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SPLYLSSSSPVPHRLEILCPPQL*SIYSRR Trigger: TCTCCTACTGTATATACTGCAGAGTTGGGGAGGGCA...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACATGCCCTCCCCAACTCTaGAGTATATACAGTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTCPPQL*SIYSRR Trigger: TCTCCTACTGTATATACTGCAGAGTTGGGGAGGGCA...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGATAGATGGACAGACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATCTTGGCAGTACCCAGTaGATCTCAGAGGAAGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: CDRWTDRTHYGRTLGVWHLGSTQ*ISEEER Trigger: ACGCTCTTCCTCTGAGATCCACTGGGTACTGCCAAG...ATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAGTAGCTGTGGAACCATaGTTAAAACTGAGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTVAVEP*LKLRPS Trigger: TGAGGGCCTCAGTTTTAACCATGGTTCCACAGCTAC...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCGTAGCTGTGGAACCATaGTTAAAACTGAGGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPLYLSSSSPVPHRLEILVAVEP*LKLRPS Trigger: TGAGGGCCTCAGTTTTAACCATGGTTCCACAGCTAC...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | AGTTTTGCTCAAAATGCTCTGTTTATTGCTCTATTCAATGACCACGAGCGGATTCCCCTGCCTGGTCTCTaGCATCCACATCCTGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SFAQNALFIALFNDHERIPLPGL*HPHPGS Trigger: GCTACCAGGATGTGGATGGCAGAGACCAGGCAGGGG...AATCCGCTCGTGGTCATTGAATAGAGCAATAAACAGAGCATTTTGAGCAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAAAGATCTTGGGTAGTTaGGGTAAAGACCCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: TRGSKITHVAKESCMPCSKILGS*GKDPAS Trigger: TGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTT...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATATGTGCTCCCCTGCCTaGTCTCTGCCATCCACATCC | + |
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Preference number: 2 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHMCSPA*SLPSTS Trigger: GGATGTGGATGGCAGAGACCAGGCAGGGGAGCACAT...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGGTGAGGGCTGAGGGGTaGGAGCTTAGTTCAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LKSAIKTRGSKITHVAKEVRAEG*ELSSVL Trigger: GAGCACTGAACTAAGCTCTCACCCCTCAGCCCTCAC...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGAGATGGGGAACAGACTaGAGAGAGGGGAGGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LKSAIKTRGSKITHVAKERWGTD*REGRMR Trigger: CCTCATCCTCCCCTCTCTTCAGTCTGTTCCCCATCT...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATAATAGCTGTGATAGATaGACAGACAGAACACATTAT | + |
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Preference number: 2 (lower is better) Translates to: TCCQRVMHALFMGSQHTHNSCDR*TDRTHY Trigger: ATAATGTGTTCTGTCTGTCCATCTATCACAGCTATT...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATCAGTGCCACATAGACTaGAGATACTCATCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHQCHID*RYSSLP Trigger: GGGCAAAGATGAGTATCTCCAGTCTATGTGGCACTG...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTGCTCAAAATGCTCTGTTTATTGCTCTATTCAATGACCACGAGCGGATTGATGTCTCACAGGTCTaGAGCTGTCCACATCCTACT | + |
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Preference number: 2 (lower is better) Translates to: SFAQNALFIALFNDHERIDVSQV*SCPHPT Trigger: AGTAGGATGTGGACAGCTCCAGACCTGTGAGACATC...AATCCGCTCGTGGTCATTGAATAGAGCAATAAACAGAGCATTTTGAGCAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102626.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGGAGATACTCATCTTTaGCCAGGAACTGTCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHGDTHL*PGTVLA Trigger: AGCTAAGACAGTTCCTGGGCAAAGATGAGTATCTCC...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGAAGATCTTGGGTAGTTaGGGTAAAGACCCAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LKSAIKTRGSKITHVAKEKILGS*GKDPAS Trigger: TGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTT...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| 3UTR CCA 72 bp | GGCCAGGGAATAGGCCCAGGACCCAAGGCAAGATCTTaGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GQGIGPGPKARS*VVGVKTQPQAW Trigger: CCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCTGGGCCTATTCCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR GCA 72 bp | TGCCTGGTCTCTGCCATCCACATCCTGGTAGCAAAATaGACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLVSAIHILVAK*TLPLQRSQWGQ Trigger: CTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGATGGCAGAGACCAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CCA 72 bp | TCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTaGCAGTACCCAGTGGATCTCAGAGGAAGAGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SWVVGVKTQPQA*QYPVDLRGRAW Trigger: CCACGCTCTTCCTCTGAGATCCACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR GCA 72 bp | ACTGTCTTAGCTGGGATCTCTCTGTCAACCATCATGTaGTCCCCTGCCTGGTCTCTGCCATCCACATCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLAGISLSTIM*SPAWSLPSTSW Trigger: CCAGGATGTGGATGGCAGAGACCAGGCAGGGGAGCACATGATGGTTGACAGAGAGATCCCAGCTAAGACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAGACCCAGCCTCAGGCTaGGCAGTACCCAGTGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTDPASG*AVPSGS Trigger: AGATCCACTGGGTACTGCCAAGCCTGAGGCTGGGTC...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR GCA 72 bp | AGCTGGGATCTCTCTGTCAACCATCATGTGCTCCCCTaGCTGGTCTCTGCCATCCACATCCTGGTAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SWDLSVNHHVLP*LVSAIHILVAK Trigger: TTTTGCTACCAGGATGTGGATGGCAGAGACCAGGCAGGGGAGCACATGATGGTTGACAGAGAGATCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR GCA 72 bp | GGGGTTCCCCACTATATCTGTCCTCTTCCTCTCCAGTaGCACATAGACTGGAGATACTCATCTTTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVPHYICPLPLQ*HIDWRYSSLPR Trigger: CCTGGGCAAAGATGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CCA 72 bp | ACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATaGGCTCTCAACACACGCATGGACAAGGGAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: THVAKESCMPCS*ALNTRMDKGTH Trigger: GTGTGTTCCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCACCCAAGGCAAGATCTaGGGTAGTTGGGGTAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPLYLSSSSPVPHRLEILTQGKI*GSWGKD Trigger: GTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGT...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAACCCAAGGCAAGATCTaGGGTAGTTGGGGTAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TRGSKITHVAKESCMPCSTQGKI*GSWGKD Trigger: GTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGT...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATTGGAGATACTCATCTTaGCCCAGGAACTGTCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TCCQRVMHALFMGSQHTHWRYSS*PRNCLS Trigger: GCTAAGACAGTTCCTGGGCAAAGATGAGTATCTCCA...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATCAGGGCTCAGATCTTaGGGGTTCCCCACTATATCT | + |
|
Preference number: 3 (lower is better) Translates to: TRGSKITHVAKESCMPCSSGLRS*GFPTIS Trigger: AGATATAGTGGGGAACCCCAAAGATCTGAGCCCTGA...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CCA 72 bp | TATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTaGAGATACTCATCTTTGCCCAGGAACTGTCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: YICPLPLQCHID*RYSSLPRNCLS Trigger: GCTAAGACAGTTCCTGGGCAAAGATGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR GCA 72 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTaGCAAAGAGTCATGCATGCCCTGTTCATGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SNKNTWLQDNTC*QRVMHALFMGS Trigger: AGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CCA 72 bp | CATGGAAACATTTTGGACCAAGTAGCTGTGGAACCATaGTTAAAACTGAGGCCCTCAGGTCTATATGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGNILDQVAVEP*LKLRPSGLYGV Trigger: CACACCATATAGACCTGAGGGCCTCAGTTTTAACCATGGTTCCACAGCTACTTGGTCCAAAATGTTTCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CCA 72 bp | GGGGACACAGTGTTTGGTACAAATAGCTGTGATAGATaGACAGACAGAACACATTATGGTAGGACACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GDTVFGTNSCDR*TDRTHYGRTLG Trigger: CCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATCACAGCTATTTGTACCAAACACTGTGTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTGGAGATACTCATCTTaGCCCAGGAACTGTCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LKSAIKTRGSKITHVAKEWRYSS*PRNCLS Trigger: GCTAAGACAGTTCCTGGGCAAAGATGAGTATCTCCA...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCATGGGGCAGGTGGCTCTaGGGGTGCCTTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPRTQGKILGSWGKDPASWGRWL*GCLEEV Trigger: CACCTCCTCAAGGCACCCCCAGAGCCACCTGCCCCA...TGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCTGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGTGCCGGCTCACTGATTaGCGCCTGTCCTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLCRLTD*RLSSGG Trigger: GCCCCCAGAGGACAGGCGTCAATCAGTGAGCCGGCA...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGATGCCACCCCTGTCCTaGCGGAGCTGGCACGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSWVVGVKTQPQAWQYPVMPPLS*RSWHVV Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGTGGCAT...CACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | GTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCGGTGCCTTGAGGAGGTaGCACACCAGGGTGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VAKCTLPLQRSQWGQRKVGALRR*HTRVVT Trigger: CGTCACCACCCTGGTGTGGCACCTCCTCAAGGCACC...GACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CAA 72 bp | GGGCCAGGGAATAGGCCCAGGACCCAAGGCAAGATCTaGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGNRPRTQGKI*GSWGKDPASGL Trigger: CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCTGGGCCTATTCCCTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCGCTCTGGGGGTGCCTTaGGGAGGTGCCACACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSALGVP*GGATPG Trigger: CCCTGGTGTGGCACCTCCTCAAGGCACCCCCAGAGC...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCGGACACGGGAGGCGCTaGGCAGATACTCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHILVAKCTLPLQRSQWGGHGRR*ADTHGL Trigger: CAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCC...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGGACACGGGAGGCGCTaGGCAGATACTCATGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLGHGRR*ADTHGL Trigger: CAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCC...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGAGGTGGCTCTGGGGGTaGCTTGAGGAGGTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLRWLWG*LEEVPH Trigger: GTGTGGCACCTCCTCAAGGCACCCCCAGAGCCACCT...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGCCCAGCGCCTTGAGGTaGCAGCTTCTGAGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLPSALR*QLLSWL Trigger: GAGCCAGCTCAGAAGCTGCCACCTCAAGGCGCTGGG...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGGATCTCAGCGGTCGGGGGTCTTCTaGTCAGGCCAGGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSWGKDPASGLAVPSGSQRSGVF*SGQDVN Trigger: GTTCACATCCTGGCCTGACCAGAAGACCCCCGACCG...CTGAGATCCACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | TGTGATAGATGGACAGACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATTGGCTCAGAGGGCGGTaGGGGTGGCGGGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDRWTDRTHYGRTLGVWHWLRGR*GWRGWW Trigger: CCACCACCCCCGCCACCCTCACCGCCCTCTGAGCCA...ATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACTGGCTCAGAGGGCGGTaGGGGTGGCGGGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDWLRGR*GWRGWW Trigger: CCACCACCCCCGCCACCCTCACCGCCCTCTGAGCCA...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCTGCCGGCTCACTGATTaGCGCCTGTCCTCTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSCRLTD*RLSSGG Trigger: GCCCCCAGAGGACAGGCGTCAATCAGTGAGCCGGCA...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCATCCACTCTGAGTAGGTaGAGGAAGGCTGCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPRTQGKILGSWGKDPASSTLSR*RKAAGS Trigger: TGAGCCGGCAGCCTTCCTTCACCTACTCAGAGTGGA...TGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | GTGGAACCATGGTTAAAACTGAGGCCCTCAGGTCTATATGGTGTGGGTCAGGCCAGGTGGCTCTGGGGGTaGCTTGAGGAGGTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VEPWLKLRPSGLYGVGQARWLWG*LEEVPH Trigger: GTGTGGCACCTCCTCAAGGCACCCCCAGAGCCACCT...GGCCTGACCCACACCATATAGACCTGAGGGCCTCAGTTTTAACCATGGTTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | AGGCCCAGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCACGCATGTCTGGATCATaGCACCCCTGTCCTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPRTQGKILGSWGKDPASRMSGS*HPCPDG Trigger: TCCGTCAGGACAGGGGTGGCATGATCCAGACATGCG...TGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGTACCAGGTGCAGGAGTaGGGGAGCCCGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: THTEQHVGRHLRFPIVTQYQVQE*GSPVGG Trigger: ACCCCCGACCGGGCTCCCCCACTCCTGCACCTGGTA...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGTGGGGTCCCTCTTGTTaGGCTGCCTCCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLWGPSC*AASSTS Trigger: GGAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCA...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAGTGGCCATGGCCACTaGGCCAGAGCACCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILSGHGH*ARAPHR Trigger: CCTGTGGGGTGCTCTGGCTCAGTGGCCATGGCCACT...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAAGTGGCCATGGCCACTaGGCCAGAGCACCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTSGHGH*ARAPHR Trigger: CCTGTGGGGTGCTCTGGCTCAGTGGCCATGGCCACT...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGGATCTCAGCTCCTCCATCCACTCTaGGTAGGTGAAGGAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSWGKDPASGLAVPSGSQLLHPL*VGEGRL Trigger: CAGCCTTCCTTCACCTACTCAGAGTGGATGGAGGAG...CTGAGATCCACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAAGTCGGCCACAGTGCTaGCGATGGGTCCCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHYICPLPLQCHIDWRYSSRPQC*RWVPAW Trigger: CCACGCAGGGACCCATCGTCAGCACTGTGGCCGACT...TGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCAGGTCTGTGGTGTTCTaGAGCCAGGAGTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IHILVAKCTLPLQRSQWGRSVVF*SQEWPW Trigger: CCATGGCCACTCCTGGCTGCAGAACACCACAGACCT...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | AGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGCTGACGATGGGTCCCTaGGTGGCGATGTACACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSWVVGVKTQPQAWQYPVLTMGP*VAMYTF Trigger: GAAGGTGTACATCGCCACGCAGGGACCCATCGTCAG...CACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGTCCCTCTTGTTGGGCTaGCTCCTCCACTTCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLSLLLG*LLHFPY Trigger: GTACGGGAAGTGGAGGAGGCAGCCCAACAAGAGGGA...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | AGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGTCCCTCTTGTTGGGCTaGCTCCTCCACTTCCCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSWVVGVKTQPQAWQYPVSLLLG*LLHFPY Trigger: GTACGGGAAGTGGAGGAGGCAGCCCAACAAGAGGGA...CACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCAGCCAGGAGTGGCCATaGCCACTGAGCCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSSQEWP*PLSQST Trigger: GGTGCTCTGGCTCAGTGGCCATGGCCACTCCTGGCT...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGTCACGTCGCAGCTGCTaGCAGCAGATGCTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGSRRSC*QQMLVA Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGACGTGA...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAGGCTGCCGGCTCACTaGTTGACGCCTGTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILRLPAH*LTPVLW Trigger: CCAGAGGACAGGCGTCAATCAGTGAGCCGGCAGCCT...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGAGGCTGCCGGCTCACTaGTTGACGCCTGTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THTEQHVGRHLRFPIVTQRLPAH*LTPVLW Trigger: CCAGAGGACAGGCGTCAATCAGTGAGCCGGCAGCCT...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | GTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCAGATGCTGGTGGCAATaGAGCAGCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAKCTLPLQRSQWGQRKVRCWWQ*SSQFSQ Trigger: TTGGGAGAACTGGCTGCTTCATTGCCACCAGCATCT...GACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGATGGGTGTGCGCTCCTaGCACACCATGCGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGMGVRS*HTMRQK Trigger: CTTTTGGCGCATGGTGTGGCAGGAGCGCACACCCAT...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGCCCTCACGTCGCAGCTaGTGGCAGCAGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THTEQHVGRHLRFPIVTQPSRRS*WQQMLV Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGACGTGAGGG...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATCCCTCACGTCGCAGCTaGTGGCAGCAGATGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCCQRVMHALFMGSQHTHPSRRS*WQQMLV Trigger: CACCAGCATCTGCTGCCAGCAGCTGCGACGTGAGGG...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCTCCATCTCTACCGGCTaGGGGAGACCCAACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSSISTG*GRPNSL Trigger: GAGGCTGTTGGGTCTCCCCCAGCCGGTAGAGATGGA...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| 3UTR CAA 72 bp | ATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTaGGCAGTACCCAGTGGATCTCAGAGGAAGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGSWGKDPASG*AVPSGSQRKSV Trigger: CACGCTCTTCCTCTGAGATCCACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGCAGATACTCATGGGCTaGCTCTTCTCGTGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RTQGKILGSWGKDPASGLQILMG*LFSWRH Trigger: GTGTCTCCACGAGAAGAGTCAGCCCATGAGTATCTG...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | CCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCATCCATCTCTACCGGCTaGGGGAGACCCAACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHYICPLPLQCHIDWRYSSISTG*GRPNSL Trigger: GAGGCTGTTGGGTCTCCCCCAGCCGGTAGAGATGGA...TGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACTGGGGCAGGTGGCTCTaGGGGTGCCTTGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDWGRWL*GCLEEV Trigger: CACCTCCTCAAGGCACCCCCAGAGCCACCTGCCCCA...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCCGGTCGGGGGTCTTCTaGTCAGGCCAGGATGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILRSGVF*SGQDVN Trigger: GTTCACATCCTGGCCTGACCAGAAGACCCCCGACCG...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCTCACGTCGCAGCTGCTaGCAGCAGATGCTGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILSRRSC*QQMLVA Trigger: TGCCACCAGCATCTGCTGCCAGCAGCTGCGACGTGA...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGAGACGTACCCTGCTGTaGGGATTGGGAAGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGRRTLL*GLGRMV Trigger: AACCATCCTTCCCAATCCTCACAGCAGGGTACGTCT...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCCTGACGATGGGTCCCTaGGTGGCGATGTACACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILLTMGP*VAMYTF Trigger: GAAGGTGTACATCGCCACGCAGGGACCCATCGTCAG...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATATGGGTGTGCGCTCCTaGCACACCATGCGCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCCQRVMHALFMGSQHTHMGVRS*HTMRQK Trigger: CTTTTGGCGCATGGTGTGGCAGGAGCGCACACCCAT...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACAGCCAGGAGTGGCCATaGCCACTGAGCCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDSQEWP*PLSQST Trigger: GGTGCTCTGGCTCAGTGGCCATGGCCACTCCTGGCT...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTDGAGT*SSGCPP Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATCCACTCTGAGTAGGTaGAGGAAGGCTGCCGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSSTLSR*RKAAGS Trigger: TGAGCCGGCAGCCTTCCTTCACCTACTCAGAGTGGA...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCGATCAGTCTCAGGCTTaGTGTCCATCACACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IHILVAKCTLPLQRSQWGDQSQA*CPSHSQ Trigger: TTGACTGTGTGATGGACATCAAGCCTGAGACTGATC...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGATCCCTGCACTGCAGTaGACGATGATTGGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGIPALQ*TMIGEQ Trigger: TTGTTCCCCAATCATCGTTCACTGCAGTGCAGGGAT...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR GCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGTGGCATCTCTTTCTaGTTGCTGGGGAGTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TCCQRVMHALFMGSQHTHGGISF*LLGSPS Trigger: CGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACC...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCAGGCTCATGGCGTGGTaGACAAACTGGTACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSRLMAW*TNWYCS Trigger: CGAACAGTACCAGTTTGTGCACCACGCCATGAGCCT...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | GTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCCAGAGGAAGGTCGAGGATTGGGAAGGATaGTTTTGTACCGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VAKCTLPLQRSQWGQRKVEDWEG*FCTDSS Trigger: GGAAGAATCGGTACAAAACCATCCTTCCCAATCCTC...GACCTTCCTCTGGCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCACGATGGGTCCCTGCGTaGCGATGTACACCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSRWVPA*RCTPSP Trigger: AGGAGAAGGTGTACATCGCCACGCAGGGACCCATCG...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATTACCAGGTGCAGGAGTaGGGGAGCCCGGTCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHYQVQE*GSPVGG Trigger: ACCCCCGACCGGGCTCCCCCACTCCTGCACCTGGTA...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | TGTGATAGATGGACAGACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATTGGGGTCCCTCTTGTTaGGCTGCCTCCTCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDRWTDRTHYGRTLGVWHWGPSC*AASSTS Trigger: GGAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCA...ATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCGCGTGGTGCACAAACTaGTACTGTTCGCATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSAWCTN*YCSHVW Trigger: CCAGACATGCGAACAGTACCAGTTTGTGCACCACGC...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATCAGATACTCATGGGCTaGCTCTTCTCGTGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TCCQRVMHALFMGSQHTHQILMG*LFSWRH Trigger: GTGTCTCCACGAGAAGAGTCAGCCCATGAGTATCTG...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAAGATGCTGGTGGCAATaGAGCAGCCAGTTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTRCWWQ*SSQFSQ Trigger: TTGGGAGAACTGGCTGCTTCATTGCCACCAGCATCT...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATATGCCACCCCTGTCCTaGCGGAGCTGGCACGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHMPPLS*RSWHVV Trigger: GACCACGTGCCAGCTCCGTCAGGACAGGGGTGGCAT...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACAGGTCTGTGGTGTTCTaGAGCCAGGAGTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDRSVVF*SQEWPW Trigger: CCATGGCCACTCCTGGCTGCAGAACACCACAGACCT...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGCGAAGCCCTCCTCATTaGAGCCAGGAGTACACATGT | + |
|
Preference number: 4 (lower is better) Translates to: THTEQHVGRHLRFPIVTQRSPPH*SQEYTC Trigger: ACATGTGTACTCCTGGCTGCAATGAGGAGGGCTTCG...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | CCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCACGAAGCCCTCCTCATTaGAGCCAGGAGTACACATGT | + |
|
Preference number: 4 (lower is better) Translates to: PHYICPLPLQCHIDWRYSRSPPH*SQEYTC Trigger: ACATGTGTACTCCTGGCTGCAATGAGGAGGGCTTCG...TGAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATCTCTTTCTGCTTGCTaGGGAGTCCTTCGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSSLSAC*GVLRPR Trigger: ACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGA...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCGGGTCAAGGAGACATTaGATCCTCTCCTCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSGSRRH*ILSSPV Trigger: TACAGGAGAGGAGAGGATCCAATGTCTCCTTGACCC...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCGATCAGTCTCAGGCTTaGTGTCCATCACACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVSHSDTERCLTGLELSDQSQA*CPSHSQ Trigger: TTGACTGTGTGATGGACATCAAGCCTGAGACTGATC...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACGGTGGCATCTCTTTCTaGTTGCTGGGGAGTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDGGISF*LLGSPS Trigger: CGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACC...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR GCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAAGGCTCATGGCGTGGTaGACAAACTGGTACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSRLMAW*TNWYCS Trigger: CGAACAGTACCAGTTTGTGCACCACGCCATGAGCCT...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACTCTCTTTCTGCTTGCTaGGGAGTCCTTCGGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDSLSAC*GVLRPR Trigger: ACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGA...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCGGGTCAAGGAGACATTaGATCCTCTCCTCTCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPLYLSSSSPVPHRLEILGSRRH*ILSSPV Trigger: TACAGGAGAGGAGAGGATCCAATGTCTCCTTGACCC...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
||
| CDS-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACCCTGCTGTGAGGATTaGGAAGGATGGTTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTPCCED*EGWFCT Trigger: GGTACAAAACCATCCTTCCCAATCCTCACAGCAGGG...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAATCCCTGCACTGCAGTaGACGATGATTGGGGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSIPALQ*TMIGEQ Trigger: TTGTTCCCCAATCATCGTTCACTGCAGTGCAGGGAT...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATTTCTGCAGCCAGGAGTaGCCATGGCCACTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHFCSQE*PWPLSQ Trigger: CTGGCTCAGTGGCCATGGCCACTCCTGGCTGCAGAA...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCACCCTGCTGTGAGGATTaGGAAGGATGGTTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TRGSKITHVAKESCMPCSPCCED*EGWFCT Trigger: GGTACAAAACCATCCTTCCCAATCCTCACAGCAGGG...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR GCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATCGCATGTCTGGATCATaGCACCCCTGTCCTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHRMSGS*HPCPDG Trigger: TCCGTCAGGACAGGGGTGGCATGATCCAGACATGCG...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTTCTGCAGCCAGGAGTaGCCATGGCCACTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKSAIKTRGSKITHVAKEFCSQE*PWPLSQ Trigger: CTGGCTCAGTGGCCATGGCCACTCCTGGCTGCAGAA...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGGATCCACAAAGTTCATaGGGATTTCAAAGAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGDPQSS*GFQRIP Trigger: CGGAATTCTTTGAAATCCCCATGAACTTTGTGGATC...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGGATGTCATACTCTTTTaGATCCACAAAGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRVMHALFMGSQHTHGQGDVILF*IHKVHG Trigger: CCCATGAACTTTGTGGATCCAAAAGAGTATGACATC...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATCGATGGGTCCCTGCGTaGCGATGTACACCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHRWVPA*RCTPSP Trigger: AGGAGAAGGTGTACATCGCCACGCAGGGACCCATCG...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR GCA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACAGTTCTCCCAATCCCTaGACTGCAGTGAACGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: DRTHYGRTLGVWHGNILDSSPNP*TAVNDD Trigger: ATCATCGTTCACTGCAGTGCAGGGATTGGGAGAACT...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSAIKTRGSKITHVAKEDGAGT*SSGCPP Trigger: TGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTC...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | AGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATAGACGTACCCTGCTGTaGGGATTGGGAAGGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNKNTWLQDNTCCQRVMHRRTLL*GLGRMV Trigger: AACCATCCTTCCCAATCCTCACAGCAGGGTACGTCT...ATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | GGAACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACAGATCCACAAAGTTCATaGGGATTTCAAAGAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTHTEQHVGRHLRFPIVTDPQSS*GFQRIP Trigger: CGGAATTCTTTGAAATCCCCATGAACTTTGTGGATC...TGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGGATGTCATACTCTTTTaGATCCACAAAGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: THTEQHVGRHLRFPIVTQDVILF*IHKVHG Trigger: CCCATGAACTTTGTGGATCCAAAAGAGTATGACATC...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | AGTTTTGCTCAAAATGCTCTGTTTATTGCTCTATTCAATGACCACGAGCGGATTGCGTGGTGCACAAACTaGTACTGTTCGCATGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFAQNALFIALFNDHERIAWCTN*YCSHVW Trigger: CCAGACATGCGAACAGTACCAGTTTGTGCACCACGC...AATCCGCTCGTGGTCATTGAATAGAGCAATAAACAGAGCATTTTGAGCAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102626.10 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGAGTTCTCCCAATCCCTaGACTGCAGTGAACGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSAIKTRGSKITHVAKESSPNP*TAVNDD Trigger: ATCATCGTTCACTGCAGTGCAGGGATTGGGAGAACT...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKSAIKTRGSKITHVAKEGCSWH*CRNSED Trigger: ATCCTCTGAGTTCCTACATCAATGCCAACTACATCC...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR TCA 90 bp | AGTTTTGCTCAAAATGCTCTGTTTATTGCTCTATTCAATGACCACGAGCGGATTGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFAQNALFIALFNDHERIGCSWH*CRNSED Trigger: ATCCTCTGAGTTCCTACATCAATGCCAACTACATCC...AATCCGCTCGTGGTCATTGAATAGAGCAATAAACAGAGCATTTTGAGCAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102626.10 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCAGCAATAAAAACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGGAGGATTGGGAAGGATaGTTTTGTACCGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKSAIKTRGSKITHVAKEEDWEG*FCTDSS Trigger: GGAAGAATCGGTACAAAACCATCCTTCCCAATCCTC...CTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGTTTTTATTGCTGACTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 90 bp | CAGAGGGCGGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTTaGTGGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCATCTCTACCG | + |
|
Preference number: 5 (lower is better) Translates to: QRAVRVAGVVASLSA*WGVLRPRPVLPSLP Trigger: CGGTAGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACCGCCCTCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 90 bp | GGCTCAGAGGGCGGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTaGTTGCTGGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSEGGEGGGGGGISF*LLGSPSASSGASIS Trigger: AGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACCGCCCTCTGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 90 bp | AGGGCGGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTTGCTaGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCATCTCTACCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAVRVAGVVASLSAC*GVLRPRPVLPSLPA Trigger: AGCCGGTAGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACCGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 90 bp | CTCTTGTTGGGCTGCCTCCTCCACTTCCCGTACCAGGTGCAGGAGTaGGGGAGCCCGGTCGGGGGTCTTCTGGTCAGGCCAGGATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLGCLLHFPYQVQE*GSPVGGLLVRPGCE Trigger: TTCACATCCTGGCCTGACCAGAAGACCCCCGACCGGGCTCCCCCACTCCTGCACCTGGTACGGGAAGTGGAGGAGGCAGCCCAACAAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 90 bp | TGGCATCTCTTTCTGCTTGCTGGGGAGTCCTTCGGCCTCGTCCGGTaGTTCCATCTCTACCGGCTGGGGGAGACCCAACAGCCTCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: WHLFLLAGESFGLVR*FHLYRLGETQQPLT Trigger: AGTGAGAGGCTGTTGGGTCTCCCCCAGCCGGTAGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 90 bp | TTCTGCCCGGAGGACACGGGAGGCGCTGAGCAGATACTCATGGGCTaGCTCTTCTCGTGGAGACACCAGGTAGCCGAAGCCCTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: FCPEDTGGAEQILMG*LFSWRHQVAEALLI Trigger: AATGAGGAGGGCTTCGGCTACCTGGTGTCTCCACGAGAAGAGTCAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCCTCCGGGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 90 bp | GGTATCCCCCAGGTCCCAGAACCCAGCCAGGCCACAGGTCCCAGATaGTTCAACACTGTGAGCGAGGAGGAGATGAGGTCTGTGGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GIPQVPEPSQATGPR*FNTVSEEEMRSVVF Trigger: GAACACCACAGACCTCATCTCCTCCTCGCTCACAGTGTTGAACCATCTGGGACCTGTGGCCTGGCTGGGTTCTGGGACCTGGGGGATACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | GTGGAACCATGGTTAAAACTGAGGCCCTCAGGTCTATATGGTGTGGGTCAGGCCGTGGCTCCCAGCGCCTaGAGGTGGCAGCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEPWLKLRPSGLYGVGQAVAPSA*RWQLLS Trigger: GCTCAGAAGCTGCCACCTCAAGGCGCTGGGAGCCAC...GGCCTGACCCACACCATATAGACCTGAGGGCCTCAGTTTTAACCATGGTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 90 bp | GAGCCTTTTCATGTAGCTCTTCTGCCCGGAGGACACGGGAGGCGCTaGGCAGATACTCATGGGCTGACTCTTCTCGTGGAGACACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EPFHVALLPGGHGRR*ADTHGLTLLVETPG Trigger: ACCTGGTGTCTCCACGAGAAGAGTCAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCCTCCGGGCAGAAGAGCTACATGAAAAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | ATCCACATCCTGGTAGCAAAATGCACTCTGCCTTTGCAGAGGAGCCAGTGGGGCGGCATCTCTTTCTGCTaGCTGGGGAGTCCTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHILVAKCTLPLQRSQWGGISFC*LGSPSA Trigger: GGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCC...GCCCCACTGGCTCCTCTGCAAAGGCAGAGTGCATTTTGCTACCAGGATGTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 90 bp | TCCTCCGTGTGGATGACTTTCTGCACGGTGATCTCCACGCCGTCATaGACCACCTGCTCTTCTGGCCAGTATTCTGTGCACTTCTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVWMTFCTVISTPS*TTCSSGQYSVHFSF Trigger: GAACGAGAAGTGCACAGAATACTGGCCAGAAGAGCAGGTGGTCCATGACGGCGTGGAGATCACCGTGCAGAAAGTCATCCACACGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCGGCATCTCTTTCTGCTaGCTGGGGAGTCCTTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSHSDTERCLTGLELSGISFC*LGSPSA Trigger: GGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCC...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | GTGGAACCATGGTTAAAACTGAGGCCCTCAGGTCTATATGGTGTGGGTCAGGCCCCGAAGCCCTCCTCATaGCAGCCAGGAGTACACATG | + |
|
Preference number: 5 (lower is better) Translates to: VEPWLKLRPSGLYGVGQAPKPSS*QPGVHM Trigger: CATGTGTACTCCTGGCTGCAATGAGGAGGGCTTCGG...GGCCTGACCCACACCATATAGACCTGAGGGCCTCAGTTTTAACCATGGTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCATGGGGTCCCTCTTGTaGGGCTGCCTCCTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSHSDTERCLTGLELSMGSLL*GCLLHF Trigger: GAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCAT...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | ACACACACAGAGCAACATGTAGGGAGACACTTGCGGTTTCCCATAGTGACACAGATGGGGTCCCTCTTGTaGGGCTGCCTCCTCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: THTEQHVGRHLRFPIVTQMGSLL*GCLLHF Trigger: GAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCAT...CTGTGTCACTATGGGAAACCGCAAGTGTCTCCCTACATGTTGCTCTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 90 bp | TTTCTGCACGGTGATCTCCACGCCGTCATGGACCACCTGCTCTTCTaGCCAGTATTCTGTGCACTTCTCGTTCATCTCCTCGATGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLHGDLHAVMDHLLF*PVFCALLVHLLDVG Trigger: ACCAACATCGAGGAGATGAACGAGAAGTGCACAGAATACTGGCCAGAAGAGCAGGTGGTCCATGACGGCGTGGAGATCACCGTGCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCAGACTAGCAGCAGACTaGGTATCCCCCAGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLYLSSSSPVPHRLEILRLAAD*VSPRSQ Trigger: CTGGGACCTGGGGGATACCAAGTCTGCTGCTAGTCT...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | CTTGCGGTTTCCCATAGTGACACAGAAAGATGTCTCACAGGTCTGGAGCTGTCCAGGGTCAAGGAGACATaGGATCCTCTCCTCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVSHSDTERCLTGLELSRVKET*DPLLSC Trigger: ACAGGAGAGGAGAGGATCCAATGTCTCCTTGACCCT...GGACAGCTCCAGACCTGTGAGACATCTTTCTGTGTCACTATGGGAAACCGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | CAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGACAAGGGTTGGGAAGGATGGTTTaGTACCGATTCTTCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QRVMHALFMGSQHTHGQGLGRMV*YRFFRT Trigger: GGTGCGGAAGAATCGGTACAAAACCATCCTTCCCAA...CCCTTGTCCATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | GACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATGGAAACATTTTGGACAGACTAGCAGCAGACTaGGTATCCCCCAGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DRTHYGRTLGVWHGNILDRLAAD*VSPRSQ Trigger: CTGGGACCTGGGGGATACCAAGTCTGCTGCTAGTCT...GTCCAAAATGTTTCCATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | TGTGATAGATGGACAGACAGAACACATTATGGTAGGACACTTGGGGTGTGGCATCCGAAGCCCTCCTCATaGCAGCCAGGAGTACACATG | + |
|
Preference number: 5 (lower is better) Translates to: CDRWTDRTHYGRTLGVWHPKPSS*QPGVHM Trigger: CATGTGTACTCCTGGCTGCAATGAGGAGGGCTTCGG...ATGCCACACCCCAAGTGTCCTACCATAATGTGTTCTGTCTGTCCATCTATCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | AGGACCCAAGGCAAGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGTTCATCTCCTCGATGTaGGTGATCATGACGATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTQGKILGSWGKDPASGLFISSM*VIMTMM Trigger: CATCATCGTCATGATCACCAACATCGAGGAGATGAA...CAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCTTGCCTTGGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 90 bp | GTAGTTGGCATTGATGTAGGAACTCAGAGGATCTTCAGGGTCTGGTaGCGTCAGACGTACCCTGCTGTGAGGATTGGGAAGGATGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVGIDVGTQRIFRVW*RQTYPAVRIGKDGF Trigger: AAAACCATCCTTCCCAATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTGAGTTCCTACATCAATGCCAACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCGGATCAGTCTCAGGCTaGATGTCCATCACACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLYLSSSSPVPHRLEILGSVSG*MSITQS Trigger: TGACTGTGTGATGGACATCAAGCCTGAGACTGATCC...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | ACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATGGGCTCTCAACACACGCATGGATCAGTCTCAGGCTaGATGTCCATCACACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: TCCQRVMHALFMGSQHTHGSVSG*MSITQS Trigger: TGACTGTGTGATGGACATCAAGCCTGAGACTGATCC...ATGCGTGTGTTGAGAGCCCATGAACAGGGCATGCATGACTCTTTGGCAACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCAAGGGTCAAGGAGACATaGGATCCTCTCCTCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TRGSKITHVAKESCMPCSRVKET*DPLLSC Trigger: ACAGGAGAGGAGAGGATCCAATGTCTCCTTGACCCT...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | AGATCTTGGGTAGTTGGGGTAAAGACCCAGCCTCAGGCTTGGCAGTACCCAGTGGGATGTCATACTCTTTaGGATCCACAAAGTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: RSWVVGVKTQPQAWQYPVGCHTL*DPQSSW Trigger: CCATGAACTTTGTGGATCCAAAAGAGTATGACATCC...CACTGGGTACTGCCAAGCCTGAGGCTGGGTCTTTACCCCAACTACCCAAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | ACACGTGGCTCCAAGATAACACATGTTGCCAAAGAGTCATGCATGCCCTGTTCATTGGGAAGGATGGTTTaGTACCGATTCTTCCGCACC | + |
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Preference number: 5 (lower is better) Translates to: TRGSKITHVAKESCMPCSLGRMV*YRFFRT Trigger: GGTGCGGAAGAATCGGTACAAAACCATCCTTCCCAA...TGAACAGGGCATGCATGACTCTTTGGCAACATGTGTTATCTTGGAGCCACGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | TCCCCACTATATCTGTCCTCTTCCTCTCCAGTGCCACATAGACTGGAGATACTCGGATGTCATACTCTTTaGGATCCACAAAGTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SPLYLSSSSPVPHRLEILGCHTL*DPQSSW Trigger: CCATGAACTTTGTGGATCCAAAAGAGTATGACATCC...GAGTATCTCCAGTCTATGTGGCACTGGAGAGGAAGAGGACAGATATAGTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS-3UTR CAA 90 bp | AGTTTTGCTCAAAATGCTCTGTTTATTGCTCTATTCAATGACCACGAGCGGATTTTCATCTCCTCGATGTaGGTGATCATGACGATGATG | + |
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Preference number: 5 (lower is better) Translates to: SFAQNALFIALFNDHERIFISSM*VIMTMM Trigger: CATCATCGTCATGATCACCAACATCGAGGAGATGAA...AATCCGCTCGTGGTCATTGAATAGAGCAATAAACAGAGCATTTTGAGCAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102626.10 |
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| CDS CCA 72 bp | GGCTGCCTCCTCCACTTCCCGTACCAGGTGCAGGAGTaGGGGAGCCCGGTCGGGGGTCTTCTGGTCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GCLLHFPYQVQE*GSPVGGLLVRP Trigger: TGGCCTGACCAGAAGACCCCCGACCGGGCTCCCCCACTCCTGCACCTGGTACGGGAAGTGGAGGAGGCAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | GGCGGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTaGTTGCTGGGGAGTCCTTCGGCCTCGTCCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GGEGGGGGGISF*LLGSPSASSGA Trigger: AGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 72 bp | GGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTaGCTGGGGAGTCCTTCGGCCTCGTCCGGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GEGGGGGGISFC*LGSPSASSGAS Trigger: GGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | GTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTTaGTGGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRVAGVVASLSA*WGVLRPRPVLP Trigger: TGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 90 bp | TCAGAGGGCGGTGAGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTaGCTGGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCATCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: SEGGEGGGGGGISFC*LGSPSASSGASIST Trigger: GGTAGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCTCACCGCCCTCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | AGGGTGGCGGGGGTGGTGGCATCTCTTTCTGCTTGCTaGGGAGTCCTTCGGCCTCGTCCGGTGCTTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RVAGVVASLSAC*GVLRPRPVLPS Trigger: AGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAAGAGATGCCACCACCCCCGCCACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | GGATCATGCCACCCCTGTCCTGACGGAGCTGGCACGTaGTCTTCAGGATGTCCACCACGCCCTCACGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: GSCHPCPDGAGT*SSGCPPRPHVA Trigger: TGCGACGTGAGGGCGTGGTGGACATCCTGAAGACCACGTGCCAGCTCCGTCAGGACAGGGGTGGCATGATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | TTTCTGCTTGCTGGGGAGTCCTTCGGCCTCGTCCGGTaGTTCCATCTCTACCGGCTGGGGGAGACCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: FLLAGESFGLVR*FHLYRLGETQQ Trigger: CTGTTGGGTCTCCCCCAGCCGGTAGAGATGGAAGCACCGGACGAGGCCGAAGGACTCCCCAGCAAGCAGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 72 bp | GAGGACACGGGAGGCGCTGAGCAGATACTCATGGGCTaGCTCTTCTCGTGGAGACACCAGGTAGCCGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: EDTGGAEQILMG*LFSWRHQVAEA Trigger: GGCTTCGGCTACCTGGTGTCTCCACGAGAAGAGTCAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | GTCTTCAGGATGTCCACCACGCCCTCACGTCGCAGCTaGTGGCAGCAGATGCTGGTGGCAATGAAGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VFRMSTTPSRRS*WQQMLVAMKQP Trigger: TGGCTGCTTCATTGCCACCAGCATCTGCTGCCAGCAGCTGCGACGTGAGGGCGTGGTGGACATCCTGAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 90 bp | TGCACTGCAGTGAACGATGATTGGGGAACAATGGGGTCCCTCTTGTaGGGCTGCCTCCTCCACTTCCCGTACCAGGTGCAGGAGTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: CTAVNDDWGTMGSLL*GCLLHFPYQVQEWG Trigger: CCCCCACTCCTGCACCTGGTACGGGAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCATTGTTCCCCAATCATCGTTCACTGCAGTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 90 bp | CCCTGCACTGCAGTGAACGATGATTGGGGAACAATGGGGTCCCTCTaGTTGGGCTGCCTCCTCCACTTCCCGTACCAGGTGCAGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PCTAVNDDWGTMGSL*LGCLLHFPYQVQEW Trigger: CCACTCCTGCACCTGGTACGGGAAGTGGAGGAGGCAGCCCAACAAGAGGGACCCCATTGTTCCCCAATCATCGTTCACTGCAGTGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 72 bp | CATGTAGCTCTTCTGCCCGGAGGACACGGGAGGCGCTaGGCAGATACTCATGGGCTGACTCTTCTCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: HVALLPGGHGRR*ADTHGLTLLVE Trigger: CTCCACGAGAAGAGTCAGCCCATGAGTATCTGCTCAGCGCCTCCCGTGTCCTCCGGGCAGAAGAGCTACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | CAGGTCCCAGAACCCAGCCAGGCCACAGGTCCCAGATaGTTCAACACTGTGAGCGAGGAGGAGATGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: QVPEPSQATGPR*FNTVSEEEMRS Trigger: AGACCTCATCTCCTCCTCGCTCACAGTGTTGAACCATCTGGGACCTGTGGCCTGGCTGGGTTCTGGGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | TTCAGGATGTCCACCACGCCCTCACGTCGCAGCTGCTaGCAGCAGATGCTGGTGGCAATGAAGCAGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: FRMSTTPSRRSC*QQMLVAMKQPV Trigger: AACTGGCTGCTTCATTGCCACCAGCATCTGCTGCCAGCAGCTGCGACGTGAGGGCGTGGTGGACATCCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | CTCGTGGAGACACCAGGTAGCCGAAGCCCTCCTCATTaGAGCCAGGAGTACACATGTCCAGGGTCAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LVETPGSRSPPH*SQEYTCPGSRR Trigger: TCTCCTTGACCCTGGACATGTGTACTCCTGGCTGCAATGAGGAGGGCTTCGGCTACCTGGTGTCTCCACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 72 bp | AGCCAGTTCTCCCAATCCCTGCACTGCAGTGAACGATaGTTGGGGAACAATGGGGTCCCTCTTGTTGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SQFSQSLHCSER*LGNNGVPLVGL Trigger: CAGCCCAACAAGAGGGACCCCATTGTTCCCCAATCATCGTTCACTGCAGTGCAGGGATTGGGAGAACTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | TTCTGCACGGTGATCTCCACGCCGTCATGGACCACCTaGTCTTCTGGCCAGTATTCTGTGCACTTCTCGTTC | + |
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Preference number: 6 (lower is better) Translates to: FCTVISTPSWTT*SSGQYSVHFSF Trigger: GAACGAGAAGTGCACAGAATACTGGCCAGAAGAGCAGGTGGTCCATGACGGCGTGGAGATCACCGTGCAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | ACGTCAGACGTACCCTGCTGTGAGGATTGGGAAGGATaGTTTTGTACCGATTCTTCCGCACCAGCCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: TSDVPCCEDWEG*FCTDSSAPALG Trigger: TCCCAGGGCTGGTGCGGAAGAATCGGTACAAAACCATCCTTCCCAATCCTCACAGCAGGGTACGTCTGACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | TGGATGACTTTCTGCACGGTGATCTCCACGCCGTCATaGACCACCTGCTCTTCTGGCCAGTATTCTGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: WMTFCTVISTPS*TTCSSGQYSVH Trigger: GTGCACAGAATACTGGCCAGAAGAGCAGGTGGTCCATGACGGCGTGGAGATCACCGTGCAGAAAGTCATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CCA 72 bp | AGTTCTCCCAATCCCTGCACTGCAGTGAACGATGATTaGGGAACAATGGGGTCCCTCTTGTTGGGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSPNPCTAVNDD*GTMGSLLLGCL Trigger: GAGGCAGCCCAACAAGAGGGACCCCATTGTTCCCCAATCATCGTTCACTGCAGTGCAGGGATTGGGAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 90 bp | AGACCCATGGACTTGACAGTCAATGAGGCAGGATCAGTCTCAGGCTaGATGTCCATCACACAGTCAAACACAGGTGTCTCGGGCACCGCG | + |
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Preference number: 6 (lower is better) Translates to: RPMDLTVNEAGSVSG*MSITQSNTGVSGTA Trigger: CGCGGTGCCCGAGACACCTGTGTTTGACTGTGTGATGGACATCAAGCCTGAGACTGATCCTGCCTCATTGACTGTCAAGTCCATGGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 72 bp | TCTCCTCCCCACTGTAGCCCCGGATGTAGTTGGCATTaGTGTAGGAACTCAGAGGATCTTCAGGGTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SPPHCSPGCSWH*CRNSEDLQGLV Trigger: CACCAGACCCTGAAGATCCTCTGAGTTCCTACATCAATGCCAACTACATCCGGGGCTACAGTGGGGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 90 bp | GTCAAGGAGACATTGGATCCTCTCCTCTCCTGTAGACCCATGGACTaGACAGTCAATGAGGCAGGATCAGTCTCAGGCTTGATGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: VKETLDPLLSCRPMD*TVNEAGSVSGLMSI Trigger: GATGGACATCAAGCCTGAGACTGATCCTGCCTCATTGACTGTCAAGTCCATGGGTCTACAGGAGAGGAGAGGATCCAATGTCTCCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS TCA 72 bp | ATTGATGTAGGAACTCAGAGGATCTTCAGGGTCTGGTaGCGTCAGACGTACCCTGCTGTGAGGATTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IDVGTQRIFRVW*RQTYPAVRIGK Trigger: CTTCCCAATCCTCACAGCAGGGTACGTCTGACGTCACCAGACCCTGAAGATCCTCTGAGTTCCTACATCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 72 bp | ACATTGGATCCTCTCCTCTCCTGTAGACCCATGGACTaGACAGTCAATGAGGCAGGATCAGTCTCAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TLDPLLSCRPMD*TVNEAGSVSGL Trigger: CAAGCCTGAGACTGATCCTGCCTCATTGACTGTCAAGTCCATGGGTCTACAGGAGAGGAGAGGATCCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS CAA 72 bp | GACTTGACAGTCAATGAGGCAGGATCAGTCTCAGGCTaGATGTCCATCACACAGTCAAACACAGGTGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: DLTVNEAGSVSG*MSITQSNTGVS Trigger: CGAGACACCTGTGTTTGACTGTGTGATGGACATCAAGCCTGAGACTGATCCTGCCTCATTGACTGTCAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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| CDS GCA 72 bp | TCCACAAAGTTCATGGGGATTTCAAAGAATTCCGCCTaGAGCAAGAAAGGGTCCAGAGCCTTTTCATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: STKFMGISKNSA*SKKGSRAFSCS Trigger: GCTACATGAAAAGGCTCTGGACCCTTTCTTGCTGCAGGCGGAATTCTTTGAAATCCCCATGAACTTTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033142.13 ENSMUST00000102626.10 |
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