Pregenerated sensors for PTPN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038764Ensembl transcript IDs: ENSMUST00000075637.11, ENSMUST00000130900.2, ENSMUST00000151964.2, ENSMUST00000153926.8
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTAGCAGCAATCCAGAGATTCAGTAGTCGGCGAATCCAGTCATaGCGTCCGAGTATACAAGGAGTGAGCAGAGGCTCGCCTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: EVAAIQRFSSRRIQS*RPSIQGVSRGSPAS Trigger: GGAAGCAGGCGAGCCTCTGCTCACTCCTTGTATACTCGGACGCCATGACTGGATTCGCCGACTACTGAATCTCTGGATTGCTGCTACTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR TCA 90 bp | AAGTTCAGCCCTTGGAATCCCACACAGAACAACACACAAAACACCTaGGCAACCACAAGTAGCCACATTGTCTGGCTTCTGGCGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: KFSPWNPTQNNTQNT*ATTSSHIVWLLAGG Trigger: TCCTCCCGCCAGAAGCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTGTGGGATTCCAAGGGCTGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR TCA 90 bp | AGAGGCACAGATCGATCCCAGGTTCCTATGAGGGCTACCTGGTGTTaGGCAGTACAGAACCAAATTCCACTTTCTCAGTATACAGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: RGTDRSQVPMRATWC*AVQNQIPLSQYTGH Trigger: GTGCCCTGTATACTGAGAAAGTGGAATTTGGTTCTGTACTGCTCAACACCAGGTAGCCCTCATAGGAACCTGGGATCGATCTGTGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CCA 90 bp | GTGCTTTCCAACATAAACAAACTGGCTGAGGGCAAAGCCGGGGTCTaGACTAAGTCTCACCCATTTTTCCCTGATGCCTCCTCTTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: VLSNINKLAEGKAGV*TKSHPFFPDASSLL Trigger: CAACAAAGAGGAGGCATCAGGGAAAAATGGGTGAGACTTAGTCCAGACCCCGGCTTTGCCCTCAGCCAGTTTGTTTATGTTGGAAAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR GCA 90 bp | CTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTaGATGCATATCTACACCATCAGTCCTTATGTACAGGGTATCTTT | + |
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Preference number: 1 (lower is better) Translates to: LEIPCCFSLGQRSHS*MHIYTISPYVQGIF Trigger: AAAGATACCCTGTACATAAGGACTGATGGTGTAGATATGCATGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CCA 90 bp | GAAGGAAGTACACTGGGGTGTCTAATCTGTTCTTTGGGAAGGTGCTaGAATGTAGGATATAAATATCTTCCCCATTCACAACCAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: EGSTLGCLICSLGRC*NVGYKYLPHSQPAK Trigger: TTTGGCTGGTTGTGAATGGGGAAGATATTTATATCCTACATTCCAGCACCTTCCCAAAGAACAGATTAGACACCCCAGTGTACTTCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CCA 90 bp | TATGCTTGGGGCCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTaGCATTGGTTTATGTATTCCAGAAGCTGGAAATTAGTTTCCATA | + |
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Preference number: 1 (lower is better) Translates to: YAWGQQKKPAFLVLQ*HWFMYSRSWKLVSI Trigger: TATGGAAACTAATTTCCAGCTTCTGGAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGGCCCCAAGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR TCA 90 bp | TTCCCAGGCAAAATATTTACCCTGAGTCTGATGCAATTCTTAGGATaGAACATAGCTTCTCAAAAGCAACTGTGGATATGGGAGATGCAG | + |
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Preference number: 1 (lower is better) Translates to: FPGKIFTLSLMQFLG*NIASQKQLWIWEMQ Trigger: CTGCATCTCCCATATCCACAGTTGCTTTTGAGAAGCTATGTTTCATCCTAAGAATTGCATCAGACTCAGGGTAAATATTTTGCCTGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATGTTCATCCTCCAGCCTaGAGTCCCTTGTGCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDVHPPA*SPLCPA Trigger: GGCAGGGCACAAGGGACTTCAGGCTGGAGGATGAAC...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | GAGAGGCACAGATCGATCCCAGGTTCCTATGAGGGCTACCTGGTGTaGAGCAGTACAGAACCAAATTCCACTTTCTCAGTATACAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ERHRSIPGSYEGYLV*SSTEPNSTFSVYRA Trigger: TGCCCTGTATACTGAGAAAGTGGAATTTGGTTCTGTACTGCTCAACACCAGGTAGCCCTCATAGGAACCTGGGATCGATCTGTGCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | ACATTCATCCGAGTTTCCCTTGGTGTCAGGGGTAATGGACAGGAATaGCCAAGGAAGTTCAGCCCTTGGAATCCCACACAGAACAACACA | + |
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Preference number: 2 (lower is better) Translates to: TFIRVSLGVRGNGQE*PRKFSPWNPTQNNT Trigger: TGTGTTGTTCTGTGTGGGATTCCAAGGGCTGAACTTCCTTGGCAATTCCTGTCCATTACCCCTGACACCAAGGGAAACTCGGATGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACAGTATACAGGGCACTaGGCAGTGCCTTTCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIQYTGH*AVPFSL Trigger: GAGTGAGAAAGGCACTGCTCAGTGCCCTGTATACTG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACCTGAACATACATCATaGAGCTGGTTCAGGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIPEHTS*SWFRHW Trigger: CCAGTGCCTGAACCAGCTTCATGATGTATGTTCAGG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCCTCCAGGGGAATGTGTaGCCCCTTCTTCAGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: PTKEASLPSSSVALVYVFLQGNV*PLLQEV Trigger: GACTTCCTGAAGAAGGGGGCACACATTCCCCTGGAG...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCCTGGAGATCCCCTGTTaGTTCTCTCTGGGCCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PTKEASLPSSSVALVYVFLEIPC*FSLGQR Trigger: CCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAG...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATGGTGTCCCCTCTCATTaGTCAAGGATGGATGACAGG | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDGVPSH*SRMDDR Trigger: CCTGTCATCCATCCTTGAGCAATGAGAGGGGACACC...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACCTGTTGCTTCTCTCTaGGCCAAAGGAGTCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIPVASL*AKGVIA Trigger: AGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | ACACAGAGACACAATGACAGACGGACACACACACACACACCACCCTaGATTGAGAAGCAGTGTTTCTCATGGTCACTTACTAGAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: TQRHNDRRTHTHTPP*IEKQCFSWSLTRRS Trigger: TGACCTTCTAGTAAGTGACCATGAGAAACACTGCTTCTCAATCAAGGGTGGTGTGTGTGTGTGTGTCCGTCTGTCATTGTGTCTCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACACACCACCCTTGATTaGGAAGCAGTGTTTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIHTTLD*EAVFLM Trigger: CATGAGAAACACTGCTTCTCAATCAAGGGTGGTGTG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACACACACACCACCCTTaGTTGAGAAGCAGTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIHTHHP*LRSSVS Trigger: AGAAACACTGCTTCTCAATCAAGGGTGGTGTGTGTG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATCAGGGCACTGAGCAGTaGCTTTCTCACTCACATCAT | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDQGTEQ*LSHSHH Trigger: ATGATGTGAGTGAGAAAGGCACTGCTCAGTGCCCTG...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGGAACCTTCAAAAACCTaGGGTCCTTTGTACAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: FCKCFAHRAVINIAIKQREPSKT*GPLYRS Trigger: GGACCTGTACAAAGGACCTCAGGTTTTTGAAGGTTC...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATAGGAAGTTCAGCCCTTaGAATCCCACACAGAACAAC | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDRKFSP*NPTQNN Trigger: GTTGTTCTGTGTGGGATTCCAAGGGCTGAACTTCCT...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | AACCCACCGGATGAAGGAAGTACACTGGGGTGTCTAATCTGTTCTTaGGGAAGGTGCTGGAATGTAGGATATAAATATCTTCCCCATTCA | + |
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Preference number: 2 (lower is better) Translates to: NPPDEGSTLGCLICS*GRCWNVGYKYLPHS Trigger: TGAATGGGGAAGATATTTATATCCTACATTCCAGCACCTTCCCAAAGAACAGATTAGACACCCCAGTGTACTTCCTTCATCCGGTGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | AGAGCTATCAAGAAATCGACGTTAGCTATCATCAGTCTTCGAGGTTaGATTGCTCAGGCTGAGGTCACAAGGAACTTGGCTGTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RAIKKSTLAIISLRG*IAQAEVTRNLAVFS Trigger: AGAAAAGACAGCCAAGTTCCTTGTGACCTCAGCCTGAGCAATCAAACCTCGAAGACTGATGATAGCTAACGTCGATTTCTTGATAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATGTCTTGTTTCAAGTGTaGGAGCTTGAAGTAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDVLFQV*ELEVAA Trigger: TGCTGCTACTTCAAGCTCTCACACTTGAAACAAGAC...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATGTAATGGACAGGAATTaGCAAGGAAGTTCAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDVMDRN*QGSSAL Trigger: AAGGGCTGAACTTCCTTGGCAATTCCTGTCCATTAC...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 90 bp | TTGGGGCCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATaGGTTTATGTATTCCAGAAGCTGGAAATTAGTTTCCATAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: LGPTKEASLPSSSVA*VYVFQKLEISFHSV Trigger: CACACTATGGAAACTAATTTCCAGCTTCTGGAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGGCCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCGGCAGAGAATTCACCTaGACATACATCATGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PTKEASLPSSSVALVYVFGREFT*TYIMKL Trigger: CAGCTTCATGATGTATGTTCAGGTGAATTCTCTGCC...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACATTGTAACCTAGGGTaGATGAACAACACACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIHCNLG*MNNTLV Trigger: AACAAGTGTGTTGTTCATTCACCCTAGGTTACAATG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATATCTGATTCTCTCCTCTaGAATGAAATGGAGACCATT | + |
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Preference number: 2 (lower is better) Translates to: QSPRTFRFCKCFAHRAVISDSLL*NEMETI Trigger: AATGGTCTCCATTTCATTTCAGAGGAGAGAATCAGA...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATCAAAGGAGTCATAGCTaGATGCATATCTACACCATC | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDQRSHS*MHIYTI Trigger: GATGGTGTAGATATGCATGCAGCTATGACTCCTTTG...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTCGTCTTTCTCTCCTCTGAAATaGAATGGAGACCATTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: KCFAHRAVINIAIKQRSSFSPLK*NGDHCN Trigger: GTTACAATGGTCTCCATTTCATTTCAGAGGAGAGAA...AGACGACCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATTCTCACTCACATCATTaGGCACTACTAAGATGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDSHSHH*ALLRCL Trigger: CAAACATCTTAGTAGTGCTCAATGATGTGAGTGAGA...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGCACAGAAATTTAAAGTaGCTGGGTTCAGATAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: FCKCFAHRAVINIAIKQRHRNLK*LGSDKL Trigger: GAGCTTATCTGAACCCAGGCACTTTAAATTTCTGTG...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATAAGCAGTGTTTCTCATaGTCACTTACTAGAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PHSQPAKFPRQNIYPESDKQCFS*SLTRRS Trigger: TGACCTTCTAGTAAGTGACCATGAGAAACACTGCTT...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTTCCTCCTCCTCTTCTTaGGGCTTTACTGAGAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: RILHKCNSSIFVTTLNVFSSSSS*GFTESV Trigger: AACGCTCTCAGTAAAGCCCCAAGAAGAGGAGGAGGA...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAAGGGCACTCTACTCTTTaGGGTCATTTTCATGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEGHSTL*GHFHVL Trigger: AAGGACATGAAAATGACCCCAAAGAGTAGAGTGCCC...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTTCCACTTGTCTGATATaGTTGGGGCCAACAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RILHKCNSSIFVTTLNVFSTCLI*LGPTKE Trigger: TTCTTTTGTTGGCCCCAAGCATATCAGACAAGTGGA...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACTTGCAACTAGGAAATaGTTTAATTGGTCCAGTATC | + |
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Preference number: 2 (lower is better) Translates to: FLCVSPSDLVKVKFCFPELATRK*FNWSSI Trigger: GATACTGGACCAATTAAAGCATTTCCTAGTTGCAAG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAAAAAATTCTGAATATTTaGATGCTATCATCCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEKILNI*MLSSPT Trigger: GGTGGGGGATGATAGCATCCAAATATTCAGAATTTT...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTGTTCTTCAGTGGCATTaGTTTATGTATTCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RILHKCNSSIFVTTLNVFVLQWH*FMYSRS Trigger: GCTTCTGGAATACATAAACCAATGCCACTGAAGAAC...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR-3UTR CCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTTTCCTAGTTCTTCAGTaGCATTGGTTTATGTATTCC | + |
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Preference number: 2 (lower is better) Translates to: RILHKCNSSIFVTTLNVFFLVLQ*HWFMYS Trigger: GGAATACATAAACCAATGCCACTGAAGAACTAGGAA...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CCA 72 bp | CCTGAGCAACCACAAGTAGCCACATTGTCTGGCTTCTaGCGGGAGGACACTGCTGGTGTCCCCTCTCATTGC | + |
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Preference number: 3 (lower is better) Translates to: PEQPQVATLSGF*REDTAGVPSHC Trigger: GCAATGAGAGGGGACACCAGCAGTGTCCTCCCGCCAGAAGCCAGACAATGTGGCTACTTGTGGTTGCTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR TCA 72 bp | AGGGCGGGCAGAATAGATCCTGTTCATCCTCCAGCCTaGAGTCCCTTGTGCCCTGCCTGTGGTACATTCATC | + |
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Preference number: 3 (lower is better) Translates to: RAGRIDPVHPPA*SPLCPACGTFI Trigger: GATGAATGTACCACAGGCAGGGCACAAGGGACTTCAGGCTGGAGGATGAACAGGATCTATTCTGCCCGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR GCA 72 bp | GGACTCTGTTTCTGGCAACTACCACTGTGTCTGAAGTaGTGGCCCCATACAATGGCAGAGAGAGGCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLCFWQLPLCLK*WPHTMAERGQL Trigger: CAGCTGGCCTCTCTCTGCCATTGTATGGGGCCAGCACTTCAGACACAGTGGTAGTTGCCAGAAACAGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | CTCTGTTTCTGGCAACTACCACTGTGTCTGAAGTGCTaGCCCCATACAATGGCAGAGAGAGGCCAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LCFWQLPLCLKC*PHTMAERGQLQ Trigger: CTGCAGCTGGCCTCTCTCTGCCATTGTATGGGGCCAGCACTTCAGACACAGTGGTAGTTGCCAGAAACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | TCCTGTTCATCCTCCAGCCTGAAGTCCCTTGTGCCCTaGCTGTGGTACATTCATCCGAGTTTCCCTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SCSSSSLKSLVP*LWYIHPSFPWC Trigger: ACACCAAGGGAAACTCGGATGAATGTACCACAGGCAGGGCACAAGGGACTTCAGGCTGGAGGATGAACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | GCAATCCAGAGATTCAGTAGTCGGCGAATCCAGTCATaGCGTCCGAGTATACAAGGAGTGAGCAGAGGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: AIQRFSSRRIQS*RPSIQGVSRGS Trigger: CGAGCCTCTGCTCACTCCTTGTATACTCGGACGCCATGACTGGATTCGCCGACTACTGAATCTCTGGATTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | CACTGCTGGTGTCCCCTCTCATTGCTCAAGGATGGATaGCAGGGGACGGTGATATGTAGGGAGAAACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: HCWCPLSLLKDG*QGTVICREKHS Trigger: ACTGTGTTTCTCCCTACATATCACCGTCCCCTGTCATCCATCCTTGAGCAATGAGAGGGGACACCAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | AGGGAGAAACACAGTTCCCAACTGGAGATCCCCTGTTaGTTCTCTCTGGGCCAAAGGAGTCATAGCTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: REKHSSQLEIPC*FSLGQRSHSCM Trigger: CATGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | AACGGTCGTCTGTTAAACAGCCTAGTGCCACTGAAATaGACCCAGTACTCTCTCCTCCTCCTCTTCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: NGRLLNSLVPLK*TQYSLLLLFLG Trigger: CCCCAAGAAGAGGAGGAGGAGAGAGTACTGGGTGCATTTCAGTGGCACTAGGCTGTTTAACAGACGACCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | CCCTCTCATTGCTCAAGGATGGATGACAGGGGACGGTaGTATGTAGGGAGAAACACAGTTCCCAACTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSHCSRMDDRGR*YVGRNTVPNWR Trigger: TCTCCAGTTGGGAACTGTGTTTCTCCCTACATATCACCGTCCCCTGTCATCCATCCTTGAGCAATGAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | TTCATGTCCTTCTCAAGATCCCACGGACTCTGTTTCTaGCAACTACCACTGTGTCTGAAGTGCTGGCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FMSFSRSHGLCF*QLPLCLKCWPH Trigger: ATGGGGCCAGCACTTCAGACACAGTGGTAGTTGCCAGAAACAGAGTCCGTGGGATCTTGAGAAGGACATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | AACATAAACAAACTGGCTGAGGGCAAAGCCGGGGTCTaGACTAAGTCTCACCCATTTTTCCCTGATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NINKLAEGKAGV*TKSHPFFPDAS Trigger: GGAGGCATCAGGGAAAAATGGGTGAGACTTAGTCCAGACCCCGGCTTTGCCCTCAGCCAGTTTGTTTATGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATAACTGGAGATCCCCTGTaGCTTCTCTCTGGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSPRTFRFCKCFAHRAVITGDPL*LLSGPK Trigger: CTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGT...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | ACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTaGGCCAAAGGAGTCATAGCTGCATGCATATCTACA | + |
|
Preference number: 3 (lower is better) Translates to: TVPNWRSPVASL*AKGVIAACIST Trigger: TGTAGATATGCATGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | CCTTGGAATCCCACACAGAACAACACACAAAACACCTaGGCAACCACAAGTAGCCACATTGTCTGGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PWNPTQNNTQNT*ATTSSHIVWLL Trigger: CAGAAGCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTGTGGGATTCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | CCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTaGATGCATATCTACACCATCAGTCCTTATGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: PCCFSLGQRSHS*MHIYTISPYVQ Trigger: CTGTACATAAGGACTGATGGTGTAGATATGCATGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATAGGTAATGGACAGGAATaGCCAAGGAAGTTCAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIGNGQE*PRKFSP Trigger: AGGGCTGAACTTCCTTGGCAATTCCTGTCCATTACC...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | CAGGGCACTGAGCAGTGCCTTTCTCACTCACATCATTaGGCACTACTAAGATGTTTGTGGGTAAAAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QGTEQCLSHSHH*ALLRCLWVKDR Trigger: CCTGTCTTTTACCCACAAACATCTTAGTAGTGCTCAATGATGTGAGTGAGAAAGGCACTGCTCAGTGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | GATCGATCCCAGGTTCCTATGAGGGCTACCTGGTGTTaGGCAGTACAGAACCAAATTCCACTTTCTCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: DRSQVPMRATWC*AVQNQIPLSQY Trigger: ATACTGAGAAAGTGGAATTTGGTTCTGTACTGCTCAACACCAGGTAGCCCTCATAGGAACCTGGGATCGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | GGTGCTCTGTGCTTTTCCCTCTACAACACTGCTCTATaGAAACCTGGTGGGTTCCACTTGTCTGATATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GALCFSLYNTAL*KPGGFHLSDML Trigger: AAGCATATCAGACAAGTGGAACCCACCAGGTTTTCATAGAGCAGTGTTGTAGAGGGAAAAGCACAGAGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | GTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCATaGATATCTACACCATCAGTCCTTATGTACAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VASLWAKGVIAA*ISTPSVLMYRV Trigger: TACCCTGTACATAAGGACTGATGGTGTAGATATGCATGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | AGTGCTGGCCCCATACAATGGCAGAGAGAGGCCAGCTaGAGCTTTTTCAAGCTTCACAGAATATTACATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SAGPIQWQREAS*SFFKLHRILHK Trigger: CTTATGTAATATTCTGTGAAGCTTGAAAAAGCTGCAGCTGGCCTCTCTCTGCCATTGTATGGGGCCAGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | ACAATGACAGACGGACACACACACACACACCACCCTTaGTTGAGAAGCAGTGTTTCTCATGGTCACTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: TMTDGHTHTHHP*LRSSVSHGHLL Trigger: TAGTAAGTGACCATGAGAAACACTGCTTCTCAATCAAGGGTGGTGTGTGTGTGTGTGTCCGTCTGTCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR TCA 72 bp | CAGAACCAAATTCCACTTTCTCAGTATACAGGGCACTaGGCAGTGCCTTTCTCACTCACATCATTGAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: QNQIPLSQYTGH*AVPFSLTSLST Trigger: AGTGCTCAATGATGTGAGTGAGAAAGGCACTGCTCAGTGCCCTGTATACTGAGAAAGTGGAATTTGGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | CTTTACAAAATATGGCTTAGCACACAATCCTGTGGTTaGTCCGGTGGTACGAGAGCTATCAAGAAATCGACG | + |
|
Preference number: 3 (lower is better) Translates to: LYKIWLSTQSCG*SGGTRAIKKST Trigger: CGTCGATTTCTTGATAGCTCTCGTACCACCGGAGCAACCACAGGATTGTGTGCTAAGCCATATTTTGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | TTAATTGTTCTCTCTGGAAAATCAACACACCATGTATaGATTCTGGAGAGTGGTACCAGCAGGGAACCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LIVLSGKSTHHV*ILESGTSREPT Trigger: GGTGGGTTCCCTGCTGGTACCACTCTCCAGAATCCATACATGGTGTGTTGATTTTCCAGAGAGAACAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCACACACACACCACCCTaGATTGAGAAGCAGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PTKEASLPSSSVALVYVFTHTPP*IEKQCF Trigger: GAAACACTGCTTCTCAATCAAGGGTGGTGTGTGTGT...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACCTGATGCCTCCTCTTaGTTGCCTTGGGAGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEPDASS*LPWEDE Trigger: TTCATCCTCCCAAGGCAACAAAGAGGAGGCATCAGG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | CACACACCACCCTTGATTGAGAAGCAGTGTTTCTCATaGTCACTTACTAGAAGGTCATTTCTAAGAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HTPPLIEKQCFS*SLTRRSFLRRV Trigger: GACCCTTCTTAGAAATGACCTTCTAGTAAGTGACCATGAGAAACACTGCTTCTCAATCAAGGGTGGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATAGGTCCTTACCCATCTaGCAACTAGGAAATGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PHSQPAKFPRQNIYPESDRSLPI*QLGNAL Trigger: TAAAGCATTTCCTAGTTGCAAGATGGGTAAGGACCT...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTCGTCTAGTTCTTCAGTGGCATaGGTTTATGTATTCCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: KCFAHRAVINIAIKQRSSSSSVA*VYVFQK Trigger: CTTCTGGAATACATAAACCAATGCCACTGAAGAACT...AGACGACCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR GCA 72 bp | AGTACACTGGGGTGTCTAATCTGTTCTTTGGGAAGGTaGTGGAATGTAGGATATAAATATCTTCCCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: STLGCLICSLGR*WNVGYKYLPHS Trigger: TGAATGGGGAAGATATTTATATCCTACATTCCAGCACCTTCCCAAAGAACAGATTAGACACCCCAGTGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | CAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTaGTTTATGTATTCCAGAAGCTGGAAATTAGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QKKPAFLVLQWH*FMYSRSWKLVS Trigger: GGAAACTAATTTCCAGCTTCTGGAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | ACACTGGGGTGTCTAATCTGTTCTTTGGGAAGGTGCTaGAATGTAGGATATAAATATCTTCCCCATTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: TLGCLICSLGRC*NVGYKYLPHSQ Trigger: TTGTGAATGGGGAAGATATTTATATCCTACATTCCAGCACCTTCCCAAAGAACAGATTAGACACCCCAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CCA 72 bp | CCTACCCCTCAACAAACTTCACTTAATTGTTCTCTCTaGAAAATCAACACACCATGTATGGATTCTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTPQQTSLNCSL*KINTPCMDSGE Trigger: CTCTCCAGAATCCATACATGGTGTGTTGATTTTCCAGAGAGAACAATTAAGTGAAGTTTGTTGAGGGGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACAAAATTCTGAATATTaGGATGCTATCATCCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEQNSEY*DAIIPH Trigger: GTGGGGGATGATAGCATCCAAATATTCAGAATTTTG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAATTCCAGCACTGCAGTaGACGAGGGCAGGCTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAAIPALQ*TRAGSP Trigger: CGGTGAGCCTGCCCTCGTTCACTGCAGTGCTGGAAT...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAGAACCACCGCTGAGTTaGGAGGGCAGGTTAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAAEPPLS*EGRLTF Trigger: GAAGGTTAACCTGCCCTCTCAACTCAGCGGTGGTTC...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCATCTTCAGCAGCTCCATaGATCCCTCCAGACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAASSAAP*IPPDCP Trigger: GGGACAGTCTGGAGGGATCCATGGAGCTGCTGAAGA...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAGTGGGACTCCCGGCTTaGTTTGATGAACATCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAAVGLPA*FDEHHH Trigger: GTGGTGATGTTCATCAAAGCAAGCCGGGAGTCCCAC...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CAA 72 bp | ACACACAAAACACCTGAGCAACCACAAGTAGCCACATaGTCTGGCTTCTGGCGGGAGGACACTGCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: THKTPEQPQVAT*SGFWREDTAGV Trigger: GACACCAGCAGTGTCCTCCCGCCAGAAGCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATATCCGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVISGQYW*HLVRPR Trigger: GCGAGGGCGGACCAAATGTCACCAGTACTGGCCGGA...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCCACAGTAGTACTGGCTaGCGTCCTCGACGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGHSSTG*RPRRTP Trigger: GGGGGTTCGTCGAGGACGCCAGCCAGTACTACTGTG...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAAGACACAGAACTGGATaGCTTCTGGGTCAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGRHRTG*LLGQAA Trigger: AGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTCT...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGACCTCTTCATCTGGTGTaGTCCGGATCAGGACTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGPLHLV*SGSGLG Trigger: ACCTAGTCCTGATCCGGATCACACCAGATGAAGAGG...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGACTGGTTTGCTCCTGCTaGAGTGTGTTGGGATCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGLVCSC*SVLGSG Trigger: ACCTGATCCCAACACACTGCAGCAGGAGCAAACCAG...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCTCCCGGTGTGGGCTGTaGTTCTGGGAGACTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGSRCGL*FWETSE Trigger: CTCTGAAGTCTCCCAGAACCACAGCCCACACCGGGA...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCGCCAGTTCTCTCGAGTaGGACTCCCGGCTTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGASSLE*DSRLAL Trigger: CAAAGCAAGCCGGGAGTCCCACTCGAGAGAACTGGC...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAACAAGAGACAACTTCTaGTCCCAGACAACTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAATRDNF*SQTTCQ Trigger: TTGGCAAGTTGTCTGGGATCAGAAGTTGTCTCTTGT...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATAGATGCCATGGTCCATaGTGTCAGGGGGATCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PHSQPAKFPRQNIYPESDRCHGP*CQGDPA Trigger: GGCCGGATCCCCCTGACATCATGGACCATGGCATCT...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAAGAAATATAGATGCCTaGTTTGCTCCTGCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PNWRSPVASLWAKGVIAARNIDA*FAPAAV Trigger: CACTGCAGCAGGAGCAAACCAGGCATCTATATTTCT...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACAGAGTCGCTGTCTTTaGGGGACAGGGGTCCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIQSRCL*GTGVPC Trigger: ACAAGGGACCCCTGTCCCCCAAAGACAGCGACTCTG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAATGGAGACACAGAACTaGATGACTTCTGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGMETQN*MTSGSG Trigger: GCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCAT...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGTCATCAGGTACGCCGTaGTCAGGCCACGCCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: IISHRRKERHRSIPGSYESSGTP*SGHATY Trigger: GTATGTGGCGTGGCCTGACCACGGCGTACCTGATGA...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAATTCGCCAGTTGGGGGTaGTGGGAGGGGACCGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEFASWG*WEGTGK Trigger: CTTCCCGGTCCCCTCCCATCACCCCCAACTGGCGAA...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCACGAGCGGCATCTTTTaGTCCACTCCTCCCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGTSGIF*STPPLR Trigger: CCTTAAGGGAGGAGTGGATCAAAAGATGCCGCTCGT...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGATATAGATGCCTGGTTTaGTCCTGCTGCAGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGYRCLV*SCCSVL Trigger: CAACACACTGCAGCAGGAGCAAACCAGGCATCTATA...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCGGTTGTGCAGATCTCTaGCTCCATGAAGCTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGGCADL*LHEAPL Trigger: GAGTGGAGCTTCATGGAGGCAGAGATCTGCACAACC...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR GCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCGGCTTGCGGATTTCATaGCGGAGCCGAGGACTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTKEASLPSSSVALVYVFGLRIS*RSRGLR Trigger: GCGAAGTCCTCGGCTCCGGCATGAAATCCGCAAGCC...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATATATTGGCTTGACGTCTaGACCATCATCGCGCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIYWLDV*TIIARW Trigger: CCAGCGCGCGATGATGGTGCAGACGTCAAGCCAATA...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGCTGGTCAACTCCATCTaGAGAGCAGGAGCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRLVNSI*RAGAWS Trigger: GCTCCAGGCTCCTGCTCTCCAGATGGAGTTGACCAG...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGGGCCACGCCACATACTaGAGATGGGTCACTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IISHRRKERHRSIPGSYEGHATY*RWVTVC Trigger: ACACACAGTGACCCATCTCCAGTATGTGGCGTGGCC...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACTTTCAGCTGCTTCCTaGGGGGTTTGCTTGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVILSAAS*GVCLPQ Trigger: TTGAGGCAAGCAAACCCCTCAGGAAGCAGCTGAAAG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATAATAAGGACCTCCTCATaGCTGGGTTCCACACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIIRTSS*LGSTPS Trigger: GGATGGTGTGGAACCCAGTCATGAGGAGGTCCTTAT...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCTGCTTTAGCCCACTGTaGTGTTCATGGAGTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGCFSPL*CSWSDS Trigger: GGAGTCACTCCATGAACAGCACAGTGGGCTAAAGCA...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGATTCAGCCTGTTTTTaGCGCTGGTGTATGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RNTVPNWRSPVASLWAKGDSACF*RWCMKN Trigger: GTTCTTCATACACCAGCGGCAAAAACAGGCTGAATC...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCCAAACTCTCCCGGTGTaGGCTGTGGTTCTGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTKEASLPSSSVALVYVFQTLPV*AVVLGD Trigger: GTCTCCCAGAACCACAGCCCACACCGGGAGAGTTTG...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGGAACTGGATGACTTCTaGGTCAGGCAGCTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IISHRRKERHRSIPGSYEELDDF*VRQLWA Trigger: AGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTC...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGAGATGTCCCGGCCATTaGTCAACACGATCTGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRRCPGH*STRSDP Trigger: GGGATCAGATCGTGTTGATCAATGGCCGGGACATCT...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGACTCAGCTCATCTTCTaGTCTGATCTCCGCCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRTQLIF*SDLRQR Trigger: TCGCTGGCGGAGATCAGATCAGAAGATGAGCTGAGT...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTGCCTGGTTTGCTCCTaGTGCAGTGTGTTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRCLVCS*CSVLGS Trigger: TGATCCCAACACACTGCAGCAGGAGCAAACCAGGCA...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATTGGAGAGCAGGAGCCTaGAGCATTCGAAGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHSQPAKFPRQNIYPESDWRAGA*SIRRWR Trigger: TCTCCATCTTCGAATGCTCCAGGCTCCTGCTCTCCA...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGCCGGACAATATCCAGTaGGTAAACAGGCAGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IISHRRKERHRSIPGSYEPDNIQ*VNRQVP Trigger: AGGAACCTGCCTGTTTACCCACTGGATATTGTCCGG...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR GCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCCCTGAGGGGTTTGCTTaGCTCAAGCCATCTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTKEASLPSSSVALVYVFPEGFA*LKPSRR Trigger: TCTCCTAGATGGCTTGAGGCAAGCAAACCCCTCAGG...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACCACGATATGTTCCCTaGATTCAGCCTGTTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIPRYVP*IQPVFA Trigger: GGCAAAAACAGGCTGAATCCAGGGAACATATCGTGG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGAGGAAACATGGCTTCTaGGAAAAGCTGACTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IISHRRKERHRSIPGSYERKHGF*EKLTQL Trigger: GAGCTGAGTCAGCTTTTCCCAGAAGCCATGTTTCCT...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| 3UTR CAA 72 bp | AGATCGATCCCAGGTTCCTATGAGGGCTACCTGGTGTaGAGCAGTACAGAACCAAATTCCACTTTCTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSIPGSYEGYLV*SSTEPNSTFSV Trigger: TACTGAGAAAGTGGAATTTGGTTCTGTACTGCTCAACACCAGGTAGCCCTCATAGGAACCTGGGATCGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATACATTTTGATCTGGTATaGACTGGCTGTCGGCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIHFDLV*TGCRQD Trigger: ATCTTGCCGACAGCCAGTTCATACCAGATCAAAATG...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATGGTAATTCAGCATGTTaGAGGCCACGATATGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PHSQPAKFPRQNIYPESDGNSAC*RPRYVP Trigger: GGGAACATATCGTGGCCTTCAACATGCTGAATTACC...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATCATCCTCGGTTTCTGTaGTGTAGGTCATCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHSQPAKFPRQNIYPESDHPRFL*CRSSHW Trigger: CCAATGAGATGACCTACATCACAGAAACCGAGGATG...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | AAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTCGTCTGCTTCTGGGAAAAGCTaGCTCAGCTCATCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCFAHRAVINIAIKQRSSASGKS*LSSSSD Trigger: ATCAGAAGATGAGCTGAGTCAGCTTTTCCCAGAAGC...AGACGACCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR GCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACCCACCCTCAGGACATaGAGGAAACATGGCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEPTLRT*RKHGFW Trigger: CCAGAAGCCATGTTTCCTGCATGTCCTGAGGGTGGG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATAGTCATCATTTTGATCTaGTATGAACTGGCTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVIVIILI*YELAVG Trigger: GCCGACAGCCAGTTCATACCAGATCAAAATGATGAC...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAATGTGGGCTGTGGTTCTaGGAGACTTCAGAGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSPSDLVKVKFCFPECGLWF*ETSESL Trigger: CAGCGACTCTGAAGTCTCCCAGAACCACAGCCCACA...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR CCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCGCAGCGGTCCCTGAGTaGCAATGTACTTGTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTKEASLPSSSVALVYVFAAVPE*QCTCSQ Trigger: TTGTGAACAAGTACATTGCCACTCAGGGACCGCTGC...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CAA 72 bp | AAGAAATCGACGTTAGCTATCATCAGTCTTCGAGGTTaGATTGCTCAGGCTGAGGTCACAAGGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKSTLAIISLRG*IAQAEVTRNLA Trigger: AGCCAAGTTCCTTGTGACCTCAGCCTGAGCAATCAAACCTCGAAGACTGATGATAGCTAACGTCGATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR TCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGCCTAGAGTCCAGTACTaGGAGAGAACATTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRPRVQY*ERTFFS Trigger: GGAAAAGAATGTTCTCTCTCAGTACTGGACTCTAGG...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTGCACAGCTTTTCTCCTaGTCACCAGGGCCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RILHKCNSSIFVTTLNVFAQLFS*SPGPVL Trigger: GAGAACTGGCCCTGGTGATCAGGAGAAAAGCTGTGC...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS-3UTR GCA 90 bp | CCAACAAAAGAAGCCAGCCTTCCTAGTTCTTCAGTGGCATTGGTTTATGTATTCAAACCTCCTTTCAGCTaGTTCCTGAGGGGTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTKEASLPSSSVALVYVFKPPFS*FLRGLL Trigger: AAGCAAACCCCTCAGGAAGCAGCTGAAAGGAGGTTT...GAATACATAAACCAATGCCACTGAAGAACTAGGAAGGCTGGCTTCTTTTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCCAAGGACATTTAGATTCTGCAAGTGCTTTGCACACAGGGCAGTGATATGTAAGAAATATAGATaGCTGGTTTGCTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPRTFRFCKCFAHRAVICKKYR*LVCSCC Trigger: GCAGCAGGAGCAAACCAGGCATCTATATTTCTTACA...TATCACTGCCCTGTGTGCAAAGCACTTGCAGAATCTAAATGTCCTTGGAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATATCGAGTTTTCTCTTTaGGCAATTCAGAGGTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHSQPAKFPRQNIYPESDIEFSL*AIQRFG Trigger: CCCGAACCTCTGAATTGCCCAAAGAGAAAACTCGAT...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCGGAGTGACTCCACCTTaGTTAAAAAGTCATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: HRTTHKTPEQPQVATLSGGVTPP*LKSHHF Trigger: AAAATGATGACTTTTTAAGCAAGGTGGAGTCACTCC...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGGCCTGTTTTTGCCGCTaGTGTATGAAGAACTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRACFCR*CMKNFF Trigger: GAAAAAGTTCTTCATACACCAGCGGCAAAAACAGGC...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACAGGCAGCTTTGGGCTaGGTTGTTTTCGGACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEQAALG*VVFGQT Trigger: AGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTCCACTGTGCTGTTCATaGAGTGACTCCACCTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RILHKCNSSIFVTTLNVFPLCCS*SDSTLL Trigger: AAGCAAGGTGGAGTCACTCCATGAACAGCACAGTGG...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTCGTCTTTTTTATCCAAATTCTaGGGCAGCTTTGCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCFAHRAVINIAIKQRSSFLSKF*GSFANE Trigger: CTCATTTGCAAAGCTGCCTCAGAATTTGGATAAAAA...AGACGACCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAAGTATTTTCGGTAGACTaGAATGCCTGCAGACGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLCVSPSDLVKVKFCFPEVFSVD*NACRRN Trigger: ATTGCGTCTGCAGGCATTGCAGTCTACCGAAAATAC...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CCA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTACTTTTTGGGGTTCCTaGAGCCTAGAGTCCAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RILHKCNSSIFVTTLNVFTFWGS*SLESST Trigger: AGTACTGGACTCTAGGCTCCAGGAACCCCAAAAAGT...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR GCA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGAAGGGTAGAAACTTGTaGAAATGTATTTTCGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FCKCFAHRAVINIAIKQRKGRNL*KCIFGR Trigger: TCTACCGAAAATACATTTGCACAAGTTTCTACCCTT...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CAA 72 bp | GATGAAGGAAGTACACTGGGGTGTCTAATCTGTTCTTaGGGAAGGTGCTGGAATGTAGGATATAAATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEGSTLGCLICS*GRCWNVGYKYL Trigger: AAGATATTTATATCCTACATTCCAGCACCTTCCCAAAGAACAGATTAGACACCCCAGTGTACTTCCTTCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| 3UTR CAA 72 bp | ACAGAGATGAATTCTTTACATAAACTCAACAGTAATTaGAATCAAGTTAGGAATCCTGAGAAAGTCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEMNSLHKLNSN*NQVRNPEKVSH Trigger: GTGGCTGACTTTCTCAGGATTCCTAACTTGATTCAAATTACTGTTGAGTTTATGTAAAGAATTCATCTCTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 90 bp | CAGGCAGCTTTGGGCTGGGTTGTTTTCGGACAAACTCTCCCGGTGTaGGCTGTGGTTCTGGGAGACTTCAGAGTCGCTGTCTTTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QAALGWVVFGQTLPV*AVVLGDFRVAVFGG Trigger: TCCCCCAAAGACAGCGACTCTGAAGTCTCCCAGAACCACAGCCCACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 90 bp | CCCGGTGTGGGCTGTGGTTCTGGGAGACTTCAGAGTCGCTGTCTTTaGGGGACAGGGGTCCCTTGTAGGTATAGAACACATCCTCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGVGCGSGRLQSRCL*GTGVPCRYRTHPRF Trigger: AAACCGAGGATGTGTTCTATACCTACAAGGGACCCCTGTCCCCCAAAGACAGCGACTCTGAAGTCTCCCAGAACCACAGCCCACACCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | TCCCCACCCTCAGGACATGCAGGAAACATGGCTTCTGGGAAAAGCTaGCTCAGCTCATCTTCTGATCTGATCTCCGCCAGCGAGCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPPSGHAGNMASGKS*LSSSSDLISASERT Trigger: TGTGCGCTCGCTGGCGGAGATCAGATCAGAAGATGAGCTGAGTCAGCTTTTCCCAGAAGCCATGTTTCCTGCATGTCCTGAGGGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 90 bp | CTTCCTGAGGGGTTTGCTTGCCTCAAGCCATCTAGGAGAGTCCACTaGGTCGTCGCCATGTTGCAAGCCGAAGTATTCCTTCTCCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPEGFACLKPSRRVH*VVAMLQAEVFLLRH Trigger: GTGACGGAGAAGGAATACTTCGGCTTGCAACATGGCGACGACCCAGTGGACTCTCCTAGATGGCTTGAGGCAAGCAAACCCCTCAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
||
| CDS CCA 90 bp | GAAGATGGAGACACAGAACTGGATGACTTCTGGGTCAGGCAGCTTTaGGCTGGGTTGTTTTCGGACAAACTCTCCCGGTGTGGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDGDTELDDFWVRQL*AGLFSDKLSRCGLW Trigger: CCACAGCCCACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 90 bp | TCTGATGAGTCATCAGGTACGCCGTGGTCAGGCCACGCCACATACTaGAGATGGGTCACTGTGTGTTCTTCCCCGGTCTCCGTGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SDESSGTPWSGHATY*RWVTVCSSPVSVFV Trigger: TACAAACACGGAGACCGGGGAAGAACACACAGTGACCCATCTCCAGTATGTGGCGTGGCCTGACCACGGCGTACCTGATGACTCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | TACAGTCCTCTGTCTGACACTGGATGTGAAAGATGCCATGGTCCATaGTGTCAGGGGGATCCGGCCAGTACTGGTGACATTTGGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YSPLSDTGCERCHGP*CQGDPASTGDIWSA Trigger: GGCGGACCAAATGTCACCAGTACTGGCCGGATCCCCCTGACATCATGGACCATGGCATCTTTCACATCCAGTGTCAGACAGAGGACTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCACACGAGCGGCATCTTTaGATCCACTCCTCCCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNWRSPVASLWAKGVIAAHERHL*IHSSLK Trigger: CTTAAGGGAGGAGTGGATCAAAAGATGCCGCTCGTG...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 90 bp | GAGCCTGGAGCATTCGAAGATGGAGACACAGAACTGGATGACTTCTaGGTCAGGCAGCTTTGGGCTGGGTTGTTTTCGGACAAACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPGAFEDGDTELDDF*VRQLWAGLFSDKLS Trigger: GGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCGAATGCTCCAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCACTGTGCACAGGTGTTaGGCAGCGGTCCCTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRTTHKTPEQPQVATLSGTVHRC*AAVPEW Trigger: CCACTCAGGGACCGCTGCCAAACACCTGTGCACAGT...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | TGCAGGAAACATGGCTTCTGGGAAAAGCTGACTCAGCTCATCTTCTaGTCTGATCTCCGCCAGCGAGCGCACAGCTTTTCTCCTGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: CRKHGFWEKLTQLIF*SDLRQRAHSFSPDH Trigger: GTGATCAGGAGAAAAGCTGTGCGCTCGCTGGCGGAGATCAGATCAGAAGATGAGCTGAGTCAGCTTTTCCCAGAAGCCATGTTTCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | CCTCGCTCGGTGAGAGTCGTCAGCATGACAACAAGAGACAACTTCTaGTCCCAGACAACTTGCCAAAACTGTGCACAGGTGTTTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRSVRVVSMTTRDNF*SQTTCQNCAQVFGS Trigger: GCTGCCAAACACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAGAAGTTGTCTCTTGTTGTCATGCTGACGACTCTCACCGAGCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | AGAAACACAGTTCCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAAGAACCACCGCTGAGTaGAGAGGGCAGGTTAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNTVPNWRSPVASLWAKGRTTAE*RGQVNL Trigger: AAGGTTAACCTGCCCTCTCAACTCAGCGGTGGTTCT...TCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGGAACTGTGTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CCCAACTGGAGATCCCCTGTTGCTTCTCTCTGGGCCAAAGGAGTCATAGCTGCAAATTCTGAGGCAGCTTaGCAAATGAGACGGCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PNWRSPVASLWAKGVIAANSEAA*QMRRLS Trigger: GCTTAGCCGTCTCATTTGCAAAGCTGCCTCAGAATT...TGCAGCTATGACTCCTTTGGCCCAGAGAGAAGCAACAGGGGATCTCCAGTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | CTCCATGAAGCTCCACTCCGTAGAAGTCAAGGGTTCGAGCTATGTTaGTGTAGCAAGATTCGGCTTCCGACTGCTTTAGCCCACTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LHEAPLRRSQGFELC*CSKIRLPTALAHCA Trigger: AGCACAGTGGGCTAAAGCAGTCGGAAGCCGAATCTTGCTACATCAACATAGCTCGAACCCTTGACTTCTACGGAGTGGAGCTTCATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
||
| CDS GCA 90 bp | CTGCAGACGCAATCCCGATCATTAGATCTAGGTTGTGCAGATCTCTaGCTCCATGAAGCTCCACTCCGTAGAAGTCAAGGGTTCGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQTQSRSLDLGCADL*LHEAPLRRSQGFEL Trigger: TAGCTCGAACCCTTGACTTCTACGGAGTGGAGCTTCATGGAGGCAGAGATCTGCACAACCTAGATCTAATGATCGGGATTGCGTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCGACTCCCGGCTTGCTTaGATGAACATCACCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRTTHKTPEQPQVATLSGDSRLA*MNITTW Trigger: CCAGGTGGTGATGTTCATCAAAGCAAGCCGGGAGTC...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | GCAGGCTCTTGGTTTCCAGCCGTTCCACTGATAAGGACCTCCTCATaGCTGGGTTCCACACCATCCCTCCAATCACCTTTTTGCAATATT | + |
|
Preference number: 5 (lower is better) Translates to: AGSWFPAVPLIRTSS*LGSTPSLQSPFCNI Trigger: AATATTGCAAAAAGGTGATTGGAGGGATGGTGTGGAACCCAGTCATGAGGAGGTCCTTATCAGTGGAACGGCTGGAAACCAAGAGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | GCAGGTGACTCTGGGTTTATCCTCGAGACCACGAGCGGCATCTTTTaGTCCACTCCTCCCTTAAGGTTAAAGCCAAATCTTCCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGDSGFILETTSGIF*STPPLRLKPNLPSS Trigger: TGAAGAGGGAAGATTTGGCTTTAACCTTAAGGGAGGAGTGGATCAAAAGATGCCGCTCGTGGTCTCGAGGATAAACCCAGAGTCACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACGAGGACTTCGCCAGTaGGGGGTGATGGGAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLCVSPSDLVKVKFCFPERGLRQ*GVMGGD Trigger: GTCCCCTCCCATCACCCCCAACTGGCGAAGTCCTCG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGCTGGGTCAGGCAGCTTaGGGCTGGGTTGTTTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: FCKCFAHRAVINIAIKQRLGQAA*GWVVFG Trigger: TCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAG...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 90 bp | CGCAGGATTTCCACAAGTTTTTGCAAGATCGGTAATTCAGCATGTTaGAGGCCACGATATGTTCCCTGGATTCAGCCTGTTTTTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRISTSFCKIGNSAC*RPRYVPWIQPVFAA Trigger: AGCGGCAAAAACAGGCTGAATCCAGGGAACATATCGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGAAATCCTGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCTCAGAGGTTCGGGTATaGTTAATTCTTCCACCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HRTTHKTPEQPQVATLSGSEVRV*LILPPN Trigger: GTTGGGTGGAAGAATTAACAATACCCGAACCTCTGA...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS GCA 90 bp | CCCAAGGGTAGAAACTTGTGCAAATGTATTTTCGGTAGACTGCAATaGCTGCAGACGCAATCCCGATCATTAGATCTAGGTTGTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PKGRNLCKCIFGRLQ*LQTQSRSLDLGCAD Trigger: ATCTGCACAACCTAGATCTAATGATCGGGATTGCGTCTGCAGGCATTGCAGTCTACCGAAAATACATTTGCACAAGTTTCTACCCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTCGTCTGATCGAGTTTTCTCTTaGGGCAATTCAGAGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KCFAHRAVINIAIKQRSSDRVFS*GNSEVR Trigger: CCGAACCTCTGAATTGCCCAAAGAGAAAACTCGATC...AGACGACCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CACAGAACAACACACAAAACACCTGAGCAACCACAAGTAGCCACATTGTCTGGCCTTCTTTCTGTAGAGTaGCTCAAACTGGATCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HRTTHKTPEQPQVATLSGLLSVE*LKLDQH Trigger: GTGTTGATCCAGTTTGAGCAACTCTACAGAAAGAAG...GCCAGACAATGTGGCTACTTGTGGTTGCTCAGGTGTTTTGTGTGTTGTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGGCTTCACACACAAACTaGTATTGGCTTGACGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCKCFAHRAVINIAIKQRASHTN*YWLDVC Trigger: GCAGACGTCAAGCCAATACAAGTTTGTGTGTGAAGC...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTGTGTCAGCCCTTCAGACTTGGTTAAGGTTAAATTTTGTTTCCCTGAACTGATCCCAGACAACTaGCCAAAACTGTGCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLCVSPSDLVKVKFCFPELIPDN*PKLCTG Trigger: ACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAG...TTCAGGGAAACAAAATTTAACCTTAACCAAGTCTGAAGGGCTGACACAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | CCCCATTCACAACCAGCCAAATTTCCCAGGCAAAATATTTACCCTGAGTCTGATTGGAGTGACTCCACCTaGCTTAAAAAGTCATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PHSQPAKFPRQNIYPESDWSDST*LKKSSF Trigger: AAATGATGACTTTTTAAGCAAGGTGGAGTCACTCCA...ATCAGACTCAGGGTAAATATTTTGCCTGGGAAATTTGGCTGGTTGTGAATGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | ATTATTTCACACAGACGGAAAGAGAGGCACAGATCGATCCCAGGTTCCTATGAGCTTTTGAAAGAAATTTaGAGTATGTTCACCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IISHRRKERHRSIPGSYELLKEI*SMFTQG Trigger: CCCTTGGGTGAACATACTCAAAATTTCTTTCAAAAG...CTCATAGGAACCTGGGATCGATCTGTGCCTCTCTTTCCGTCTGTGTGAAATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | TTCTGCAAGTGCTTTGCACACAGGGCAGTGATAAACATTGCTATCAAACAACGGTGGCCCAAATCTTGTTaGTTAACTTTAAAGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCKCFAHRAVINIAIKQRWPKSC*LTLKVC Trigger: ACAGACCTTTAAAGTTAACAAACAAGATTTGGGCCA...CCGTTGTTTGATAGCAATGTTTATCACTGCCCTGTGTGCAAAGCACTTGCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS-3UTR CAA 90 bp | AGAATATTACATAAGTGTAACAGCAGCATTTTCGTGACCACACTCAACGTGTTTCGACTGGCCCAAATCTaGTTTGTTAACTTTAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RILHKCNSSIFVTTLNVFRLAQI*FVNFKG Trigger: ACCTTTAAAGTTAACAAACAAGATTTGGGCCAGTCG...AAACACGTTGAGTGTGGTCACGAAAATGCTGCTGTTACACTTATGTAATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS GCA 72 bp | TTGTCCGCGGAGGAATGGCGGGGCTTGCGGATTTCATaGCGGAGCCGAGGACTTCGCCAGTTGGGGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LSAEEWRGLRIS*RSRGLRQLGVM Trigger: CATCACCCCCAACTGGCGAAGTCCTCGGCTCCGGCATGAAATCCGCAAGCCCCGCCATTCCTCCGCGGACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CAA 90 bp | CTTCGCCAGTTGGGGGTGATGGGAGGGGACCGGGAAGGCAGGCTCTaGGTTTCCAGCCGTTCCACTGATAAGGACCTCCTCATGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRQLGVMGGDREGRL*VSSRSTDKDLLMTG Trigger: CCCAGTCATGAGGAGGTCCTTATCAGTGGAACGGCTGGAAACCAAGAGCCTGCCTTCCCGGTCCCCTCCCATCACCCCCAACTGGCGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS TCA 72 bp | TGGTCCATGATGTCAGGGGGATCCGGCCAGTACTGGTaGCATTTGGTCCGCCCTCGCTCGGTGAGAGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: WSMMSGGSGQYW*HLVRPRSVRVV Trigger: GACGACTCTCACCGAGCGAGGGCGGACCAAATGTCACCAGTACTGGCCGGATCCCCCTGACATCATGGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CAA 72 bp | CTGGATGACTTCTGGGTCAGGCAGCTTTGGGCTGGGTaGTTTTCGGACAAACTCTCCCGGTGTGGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LDDFWVRQLWAG*FSDKLSRCGLW Trigger: CCACAGCCCACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CAA 90 bp | GCTTGCCTCAAGCCATCTAGGAGAGTCCACTGGGTCGTCGCCATGTaGCAAGCCGAAGTATTCCTTCTCCGTCACACCCAGGTGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: ACLKPSRRVHWVVAM*QAEVFLLRHTQVAI Trigger: TATGGCCACCTGGGTGTGACGGAGAAGGAATACTTCGGCTTGCAACATGGCGACGACCCAGTGGACTCTCCTAGATGGCTTGAGGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
||
| CDS CAA 90 bp | TGCAGGGTACAGGGAAAACCTCCTTTCAGCTGCTTCCTGAGGGGTTaGCTTGCCTCAAGCCATCTAGGAGAGTCCACTGGGTCGTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CRVQGKPPFSCFLRG*LASSHLGESTGSSP Trigger: TGGCGACGACCCAGTGGACTCTCCTAGATGGCTTGAGGCAAGCAAACCCCTCAGGAAGCAGCTGAAAGGAGGTTTTCCCTGTACCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
||
| CDS CAA 90 bp | GACACAGAACTGGATGACTTCTGGGTCAGGCAGCTTTGGGCTGGGTaGTTTTCGGACAAACTCTCCCGGTGTGGGCTGTGGTTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTELDDFWVRQLWAG*FSDKLSRCGLWFWE Trigger: CTCCCAGAACCACAGCCCACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 72 bp | TTTTCGGACAAACTCTCCCGGTGTGGGCTGTGGTTCTaGGAGACTTCAGAGTCGCTGTCTTTGGGGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FSDKLSRCGLWF*ETSESLSLGDR Trigger: CCTGTCCCCCAAAGACAGCGACTCTGAAGTCTCCCAGAACCACAGCCCACACCGGGAGAGTTTGTCCGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 72 bp | TTGGGCTGGGTTGTTTTCGGACAAACTCTCCCGGTGTaGGCTGTGGTTCTGGGAGACTTCAGAGTCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGWVVFGQTLPV*AVVLGDFRVAV Trigger: GACAGCGACTCTGAAGTCTCCCAGAACCACAGCCCACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 72 bp | GCTTTTCTCCTGATCACCAGGGCCAGTTCTCTCGAGTaGGACTCCCGGCTTGCTTTGATGAACATCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: AFLLITRASSLE*DSRLALMNITT Trigger: GGTGGTGATGTTCATCAAAGCAAGCCGGGAGTCCCACTCGAGAGAACTGGCCCTGGTGATCAGGAGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
||
| CDS CCA 72 bp | AACTCCAGGAAGTCTGATGAGTCATCAGGTACGCCGTaGTCAGGCCACGCCACATACTGGAGATGGGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: NSRKSDESSGTP*SGHATYWRWVT Trigger: AGTGACCCATCTCCAGTATGTGGCGTGGCCTGACCACGGCGTACCTGATGACTCATCAGACTTCCTGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | AAGCCATCTAGGAGAGTCCACTGGGTCGTCGCCATGTaGCAAGCCGAAGTATTCCTTCTCCGTCACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: KPSRRVHWVVAM*QAEVFLLRHTQ Trigger: CTGGGTGTGACGGAGAAGGAATACTTCGGCTTGCAACATGGCGACGACCCAGTGGACTCTCCTAGATGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS CAA 72 bp | CAGGGAAAACCTCCTTTCAGCTGCTTCCTGAGGGGTTaGCTTGCCTCAAGCCATCTAGGAGAGTCCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: QGKPPFSCFLRG*LASSHLGESTG Trigger: CCCAGTGGACTCTCCTAGATGGCTTGAGGCAAGCAAACCCCTCAGGAAGCAGCTGAAAGGAGGTTTTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS TCA 72 bp | GCCTGGAGCATTCGAAGATGGAGACACAGAACTGGATaGCTTCTGGGTCAGGCAGCTTTGGGCTGGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: AWSIRRWRHRTG*LLGQAALGWVV Trigger: AACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCGAATGCTCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CCA 72 bp | GGGTTTGCTTGCCTCAAGCCATCTAGGAGAGTCCACTaGGTCGTCGCCATGTTGCAAGCCGAAGTATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GFACLKPSRRVH*VVAMLQAEVFL Trigger: AAGGAATACTTCGGCTTGCAACATGGCGACGACCCAGTGGACTCTCCTAGATGGCTTGAGGCAAGCAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS CCA 72 bp | GACACAGAACTGGATGACTTCTGGGTCAGGCAGCTTTaGGCTGGGTTGTTTTCGGACAAACTCTCCCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: DTELDDFWVRQL*AGLFSDKLSRC Trigger: ACACCGGGAGAGTTTGTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CCA 72 bp | GCATTCGAAGATGGAGACACAGAACTGGATGACTTCTaGGTCAGGCAGCTTTGGGCTGGGTTGTTTTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: AFEDGDTELDDF*VRQLWAGLFSD Trigger: GTCCGAAAACAACCCAGCCCAAAGCTGCCTGACCCAGAAGTCATCCAGTTCTGTGTCTCCATCTTCGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | GATTGTACTGCGTACGAGGCTAGAACCACCGCTGAGTaGAGAGGGCAGGTTAACCTTCCTTCGCAAACATCC | + |
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Preference number: 6 (lower is better) Translates to: DCTAYEARTTAE*RGQVNLPSQTS Trigger: GGATGTTTGCGAAGGAAGGTTAACCTGCCCTCTCAACTCAGCGGTGGTTCTAGCCTCGTACGCAGTACAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS CAA 90 bp | AGTCGTCAGCATGACAACAAGAGACAACTTCTGATCCCAGACAACTaGCCAAAACTGTGCACAGGTGTTTGGCAGCGGTCCCTGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SRQHDNKRQLLIPDN*PKLCTGVWQRSLSG Trigger: GCCACTCAGGGACCGCTGCCAAACACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAGAAGTTGTCTCTTGTTGTCATGCTGACGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | ATTGTACTGCGTACGAGGCTAGAACCACCGCTGAGTTaGGAGGGCAGGTTAACCTTCCTTCGCAAACATCCA | + |
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Preference number: 6 (lower is better) Translates to: IVLRTRLEPPLS*EGRLTFLRKHP Trigger: TGGATGTTTGCGAAGGAAGGTTAACCTGCCCTCTCAACTCAGCGGTGGTTCTAGCCTCGTACGCAGTACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS TCA 72 bp | TGGTTTCCAGCCGTTCCACTGATAAGGACCTCCTCATaGCTGGGTTCCACACCATCCCTCCAATCACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: WFPAVPLIRTSS*LGSTPSLQSPF Trigger: AAAAGGTGATTGGAGGGATGGTGTGGAACCCAGTCATGAGGAGGTCCTTATCAGTGGAACGGCTGGAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | TGCTCTGAGATGTCCCGGCCATTGATCAACACGATCTaGTCCCCCTCATTCAGCTTAGGCATGCAGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: CSEMSRPLINTI*SPSFSLGMQVS Trigger: AGATACCTGCATGCCTAAGCTGAATGAGGGGGATCAGATCGTGTTGATCAATGGCCGGGACATCTCAGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | TCAGGACATGCAGGAAACATGGCTTCTGGGAAAAGCTaGCTCAGCTCATCTTCTGATCTGATCTCCGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGHAGNMASGKS*LSSSSDLISAS Trigger: GCTGGCGGAGATCAGATCAGAAGATGAGCTGAGTCAGCTTTTCCCAGAAGCCATGTTTCCTGCATGTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS GCA 72 bp | AGACAACTTCTGATCCCAGACAACTTGCCAAAACTGTaGACAGGTGTTTGGCAGCGGTCCCTGAGTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RQLLIPDNLPKL*TGVWQRSLSGN Trigger: ATTGCCACTCAGGGACCGCTGCCAAACACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAGAAGTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | TCTTCGTACACTCGAAGGATCGCTTCACACACAAACTaGTATTGGCTTGACGTCTGCACCATCATCGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SSYTRRIASHTN*YWLDVCTIIAR Trigger: GCGCGCGATGATGGTGCAGACGTCAAGCCAATACAAGTTTGTGTGTGAAGCGATCCTTCGAGTGTACGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS GCA 72 bp | CAATCCCGATCATTAGATCTAGGTTGTGCAGATCTCTaGCTCCATGAAGCTCCACTCCGTAGAAGTCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: QSRSLDLGCADL*LHEAPLRRSQG Trigger: CCCTTGACTTCTACGGAGTGGAGCTTCATGGAGGCAGAGATCTGCACAACCTAGATCTAATGATCGGGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | CATGACAACAAGAGACAACTTCTGATCCCAGACAACTaGCCAAAACTGTGCACAGGTGTTTGGCAGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: HDNKRQLLIPDN*PKLCTGVWQRS Trigger: GGACCGCTGCCAAACACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAGAAGTTGTCTCTTGTTGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | GTGAGAGTCGTCAGCATGACAACAAGAGACAACTTCTaGTCCCAGACAACTTGCCAAAACTGTGCACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VRVVSMTTRDNF*SQTTCQNCAQV Trigger: CACCTGTGCACAGTTTTGGCAAGTTGTCTGGGATCAGAAGTTGTCTCTTGTTGTCATGCTGACGACTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | CTCTGGGTTTATCCTCGAGACCACGAGCGGCATCTTTaGATCCACTCCTCCCTTAAGGTTAAAGCCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LWVYPRDHERHL*IHSSLKVKAKS Trigger: AGATTTGGCTTTAACCTTAAGGGAGGAGTGGATCAAAAGATGCCGCTCGTGGTCTCGAGGATAAACCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | TCTGGGTTTATCCTCGAGACCACGAGCGGCATCTTTTaGTCCACTCCTCCCTTAAGGTTAAAGCCAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: SGFILETTSGIF*STPPLRLKPNL Trigger: AAGATTTGGCTTTAACCTTAAGGGAGGAGTGGATCAAAAGATGCCGCTCGTGGTCTCGAGGATAAACCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS TCA 72 bp | GGCAACACATCTTTGTATCGGTTTTTATCCAAATTCTaGGGCAGCTTTGCAAATGAGACGGCTAAGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GNTSLYRFLSKF*GSFANETAKPG Trigger: GCCCGGCTTAGCCGTCTCATTTGCAAAGCTGCCTCAGAATTTGGATAAAAACCGATACAAAGATGTGTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CCA 72 bp | TCGGCTTCCGACTGCTTTAGCCCACTGTGCTGTTCATaGAGTGACTCCACCTTGCTTAAAAAGTCATCATTT | + |
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Preference number: 6 (lower is better) Translates to: SASDCFSPLCCS*SDSTLLKKSSF Trigger: AAATGATGACTTTTTAAGCAAGGTGGAGTCACTCCATGAACAGCACAGTGGGCTAAAGCAGTCGGAAGCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS TCA 72 bp | TCTGTACCAAGCCATCTAAAAACCGTATGCTGCAGATaGCCTCGGATCGAGTTTTCTCTTTGGGCAATTCAG | + |
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Preference number: 6 (lower is better) Translates to: SVPSHLKTVCCR*PRIEFSLWAIQ Trigger: CTGAATTGCCCAAAGAGAAAACTCGATCCGAGGTCATCTGCAGCATACGGTTTTTAGATGGCTTGGTACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075637.11 ENSMUST00000130900.2 ENSMUST00000153926.8 |
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| CDS CAA 72 bp | GCCATAGGCCATATCCAGAAGCGACTGGCCCAAATCTaGTTTGTTAACTTTAAAGGTCTGTACCAAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: AIGHIQKRLAQI*FVNFKGLYQAI Trigger: GATGGCTTGGTACAGACCTTTAAAGTTAACAAACAAGATTTGGGCCAGTCGCTTCTGGATATGGCCTATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075637.11 ENSMUST00000153926.8 |
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| CDS CAA 90 bp | TCTAAAAACCGTATGCTGCAGATGACCTCGGATCGAGTTTTCTCTTaGGGCAATTCAGAGGTTCGGGTATTGTTAATTCTTCCACCCAAC | + |
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Preference number: 6 (lower is better) Translates to: SKNRMLQMTSDRVFS*GNSEVRVLLILPPN Trigger: GTTGGGTGGAAGAATTAACAATACCCGAACCTCTGAATTGCCCAAAGAGAAAACTCGATCCGAGGTCATCTGCAGCATACGGTTTTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000075637.11 ENSMUST00000130900.2 ENSMUST00000151964.2 ENSMUST00000153926.8 |
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| CDS TCA 72 bp | TCCACAAGTTTTTGCAAGATCGGTAATTCAGCATGTTaGAGGCCACGATATGTTCCCTGGATTCAGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: STSFCKIGNSAC*RPRYVPWIQPV Trigger: AACAGGCTGAATCCAGGGAACATATCGTGGCCTTCAACATGCTGAATTACCGATCTTGCAAAAACTTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 72 bp | CGTATGCTGCAGATGACCTCGGATCGAGTTTTCTCTTaGGGCAATTCAGAGGTTCGGGTATTGTTAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: RMLQMTSDRVFS*GNSEVRVLLIL Trigger: AAGAATTAACAATACCCGAACCTCTGAATTGCCCAAAGAGAAAACTCGATCCGAGGTCATCTGCAGCATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000075637.11 ENSMUST00000130900.2 ENSMUST00000151964.2 ENSMUST00000153926.8 |
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| CDS GCA 72 bp | AGAAACTTGTGCAAATGTATTTTCGGTAGACTGCAATaGCTGCAGACGCAATCCCGATCATTAGATCTAGGT | + |
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Preference number: 6 (lower is better) Translates to: RNLCKCIFGRLQ*LQTQSRSLDLG Trigger: ACCTAGATCTAATGATCGGGATTGCGTCTGCAGGCATTGCAGTCTACCGAAAATACATTTGCACAAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CAA 90 bp | TCCAGTACTGAGAGAGAACATTCTTTTCCTGAGGTAGTAACTTTTTaGCCTGAAAGAACGAATGGTGTTCGACGCAGGATTTCCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: SSTEREHSFPEVVTF*PERTNGVRRRISTS Trigger: ACTTGTGGAAATCCTGCGTCGAACACCATTCGTTCTTTCAGGCAAAAAAGTTACTACCTCAGGAAAAGAATGTTCTCTCTCAGTACTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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| CDS CCA 72 bp | TGCAATATTGGTTATTTACAGACTTTTTGGGGTTCCTaGAGCCTAGAGTCCAGTACTGAGAGAGAACATTCT | + |
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Preference number: 6 (lower is better) Translates to: CNIGYLQTFWGS*SLESSTEREHS Trigger: AGAATGTTCTCTCTCAGTACTGGACTCTAGGCTCCAGGAACCCCAAAAAGTCTGTAAATAACCAATATTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075637.11 |
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