Pregenerated sensors for PTPN23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036057Ensembl transcript IDs: ENSMUST00000040021.12, ENSMUST00000200531.2
Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGGGCCAGCCCCGGCCTaGCCCAGGGTCTCCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGGPAPA*PRVSCN Trigger: ATTGCAGGAGACCCTGGGCCAGGCCGGGGCTGGCCC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGAGCAGCCTCCTGGCCTaGGCCCATGGGCACCCGACT | + |
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Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKSSLLA*AHGHPT Trigger: AGTCGGGTGCCCATGGGCTCAGGCCAGGAGGCTGCT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGGCTTCAGGCACTaGCGGCTCCTCCTCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAGGFRH*RLLLWL Trigger: CAGCCAGAGGAGGAGCCGTCAGTGCCTGAAGCCCCC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGACACCCGCCGCACGGCTaGATACTGCACGTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGHPPHG*ILHVGL Trigger: GAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTG...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGTCTCCAGCCTCCACTaGCTCCCCCTCCTCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMVSSLH*LPLLTA Trigger: CGCCGTGAGGAGGGGGAGGCAGTGGAGGCTGGAGAC...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGCATCCAGTGCTCCTaGATCCCCCAGCTGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAGIQCS*IPQLAP Trigger: CGGGGCCAGCTGGGGGATGCAGGAGCACTGGATGCC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGGTCCAGCCAGATCATaGGCATCCGGGGCACGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGGPARS*ASGARP Trigger: AGGCCGTGCCCCGGATGCCCATGATCTGGCTGGACC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGACTGTCCAGGAGCTGCTaGCGAGCGGCCTCTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGLSRSC*RAASWA Trigger: TGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAG...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGACCTGGGGCCCAGTCCTaGGGACTGGAAAGCCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGPGAQS*GLESLW Trigger: CCACAGGCTTTCCAGTCCCCAGGACTGGGCCCCAGG...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGGCCATATGCCAGGGTaGGGTGAGGATGAGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGGHMPG*GEDEGA Trigger: GGCCCCCTCATCCTCACCCCACCCTGGCATATGGCC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGGGCTGACTGGCTGGTaGGGGGCCTCGAATGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGGLTGW*GASNGD Trigger: GTCTCCATTCGAGGCCCCCCACCAGCCAGTCAGCCC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGGGCTCCATGCACCATaGGCTGGCCCCTCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGGLHAP*AGPSLW Trigger: CCACAGAGAGGGGCCAGCCCATGGTGCATGGAGCCC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGGCTGTTGGAGGTCTTaGAGGTACTGGGCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGGCWRS*RYWARP Trigger: GGGCCTGGCCCAGTACCTTCAAGACCTCCAACAGCC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGACCGCACCTGGTCCAGTaGTCCACTGAGCAGGCGCAA | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGPHLVQ*STEQAQ Trigger: TTGCGCCTGCTCAGTGGACCACTGGACCAGGTGCGG...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGCTGGCCCCTCTCTGTaGGGAAGTAACGCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGAGPSL*GSNAPP Trigger: AGGTGGCGCGTTACTTCCCCACAGAGAGGGGCCAGC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTCCAACAGGCACTCCTaGGCCTGGCCCAGCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKSNRHS*AWPSMR Trigger: CCTCATGCTGGGCCAGGCTCAGGAGTGCCTGTTGGA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTGTCAGGCCGGACGCTaGGTGCCGCACACTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKCQAGR*VPHTSP Trigger: TGGAGAAGTGTGCGGCACTCAGCGTCCGGCCTGACA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCTTTGTCCTCTGGGGTaGGGGCTGGTGTGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMLCPLG*GLVWVG Trigger: CCCTACCCACACCAGCCCTCACCCCAGAGGACAAAG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGAGGCCGGACGCTGAGTaGCGCACACTTCTCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGRPDAE*RTLLHE Trigger: CTCATGGAGAAGTGTGCGGCACTCAGCGTCCGGCCT...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGCACCTCCTGCACGGCTaGATAGAGCAACGCGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGHLLHG*IEQREG Trigger: GCCTTCGCGTTGCTCTATGCAGCCGTGCAGGAGGTG...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCACTGCAAGCTCAGCCTTaGCAACAGAGGGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAALQAQP*QQRGQG Trigger: GCCCTGGCCCCTCTGTTGCCAAGGCTGAGCTTGCAG...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCAGGGCAGCCCGCACCTaGTCCAGTGGTCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIRAART*SSGPLS Trigger: GCTCAGTGGACCACTGGACCAGGTGCGGGCTGCCCT...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAACGGCGGGACAGCAATaGCTTTGGGGCTGTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAATAGQQ*LWGCRP Trigger: CGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGT...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCTGGGGAGAGGATCTaGGTACGAGGCCCAACTCCG | + |
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Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKAGERI*VRGPTP Trigger: CGGAGTTGGGCCTCGTACCCAGATCCTCTCCCCAGC...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCATCGGGTCCTGAGAGCTaGGGAGGTGGAGCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAASGPES*GGGAEG Trigger: TCCCTCTGCTCCACCTCCCCAGCTCTCAGGACCCGA...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGACTGGAAAGCAGGGCTaGGGAAGAGCAGGGGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGTGKQG*GRAGVG Trigger: CCCTACCCCTGCTCTTCCCCAGCCCTGCTTTCCAGT...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGCAGCTGGGGCAGCTCTaGAATCCCATTCCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGQLGQL*NPIPSL Trigger: GAGGCTGGGAATGGGATTCCAGAGCTGCCCCAGCTG...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGGGTTCTACAAGGCCTaGGAGGCTGGCAGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELGFYKA*EAGSWG Trigger: TCCCCAGCTGCCAGCCTCCCAGGCCTTGTAGAACCC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGAGCGCTTGAGGCTCTaGTCCCGGAACTGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELERLRL*SRNCRL Trigger: GAGTCTGCAGTTCCGGGATCAGAGCCTCAAGCGCTC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCGGCTGTAGCAAGGGCTaGCCACCCCCAGGAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAGCSKG*PPPGGW Trigger: CCAGCCTCCTGGGGGTGGGCAGCCCTTGCTACAGCC...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCCTCCAGCTCCTaGTGCAACTGCTGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELKASSS*CNCCSL Trigger: GAGGCTGCAGCAGTTGCAGCAGGAGCTGGAGGCCTT...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATACGCTCAGGGCTCCATaGACCATGGGCTGGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDTLRAP*TMGWPL Trigger: GAGGGGCCAGCCCATGGTGCATGGAGCCCTGAGCGT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCACGCGAAGGCTCCTGTaGGGCCCACCCCAGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRATRRLL*GPPQSC Trigger: GCAGCTCTGGGGTGGGCCGCACAGGAGCCTTCGCGT...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGCTACAGCAGCCTCCTaGCCTGAGCCCATGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDATAAS*PEPMGT Trigger: GGTGCCCATGGGCTCAGGCCAGGAGGCTGCTGTAGC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGCGCCTGCTGCACACTaGAAGTGGGTGCAGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELAPAAH*KWVQET Trigger: AGTCTCCTGCACCCACTTCCAGTGTGCAGCAGGCGC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAAGACCTACAACTGGTTaGGGTGGCCCTACCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGRPTTG*GGPTPA Trigger: TGCAGGGGTAGGGCCACCCCAACCAGTTGTAGGTCT...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCCCCAGTCCTGGGGACTaGAAAGCCTGTGGGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIPSPGD*KACGDP Trigger: GGGATCCCCACAGGCTTTCCAGTCCCCAGGACTGGG...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCCAAGGCCTGGGAGGCTaGCAGCTGGGGAATCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIQGLGG*QLGNPS Trigger: GCTTGGATTCCCCAGCTGCCAGCCTCCCAGGCCTTG...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGTGCTGTCATACGGCATaGCATCCTGGTGCCGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGCCHTA*HPGAGS Trigger: AGAACCGGCACCAGGATGTCATGCCGTATGACAGCA...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCATGCACCTCCTGGATaGAGCGCAGCAGATTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMHAPPG*SAADCQ Trigger: CTGGCAATCTGCTGCGCTTCATCCAGGAGGTGCATG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCCGCACGGCTGCATACTaGACGTTGGCCTCAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIRTAAY*TLASVR Trigger: CCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCG...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAATGGAGACAGGGGTTaGCTGAGGACCAAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELNGDRG*LRTKGP Trigger: AGGCCCCTTGGTCCTCAGGCAACCCCTGTCTCCATT...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGAGCTCCTGCTGCAACTaGTGCAGCCTCTCGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMSSCCN*CSLSGC Trigger: ACATCCCGAGAGGCTGCAGCAGTTGCAGCAGGAGCT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGATGGCGCTGTAGGACCTaGTCCACATGTCTCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGWRCRT*STCLTN Trigger: GTTGGTGAGACATGTGGAGCAGGTCCTACAGCGCCA...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCCACTGGCCACAGGCTTaGCAGGAGGAGGCACACCAT | + |
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Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIHWPQA*QEEAHH Trigger: ATGGTGTGCCTCCTCCTGGCAAGCCTGTGGCCAGTG...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCGGAGGACATTGTCCTaGGCGGCCAGGTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDRRTLS*AARFCS Trigger: GGAGCAGAACCTGGCCGCCCAGGACAATGTCCTCCG...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCGGGAAGACCTACAACTaGTTGGGGTGGCCCTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIGKTYN*LGWPYP Trigger: GGGGTAGGGCCACCCCAACCAGTTGTAGGTCTTCCC...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGTGTTGGTGGTGGTGGTaGAAGAATCCCTGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMCWWWW*KNPWGL Trigger: CAGGCCCCAGGGATTCTTCCACCACCACCACCAACA...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGTAGGGTGTTGGTGGTaGTGGTGGAAGAATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGVGCWW*WWKNPW Trigger: CCAGGGATTCTTCCACCACCACCACCAACACCCTAC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCCCACCCCCAGGAGGCTaGGTACCTCCATGCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAPPPGG*VPPCWL Trigger: GAGCCAGCATGGAGGTACCCAGCCTCCTGGGGGTGG...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAGCGGGCAATGGCAATaGATCGACCTCGGGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELSGQWQ*IDLGHR Trigger: ACGATGCCCGAGGTCGATCCATTGCCATTGCCCGCT...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGAGTAGCAGCGGGCAATaGCAATGGATCGACCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKSSSGQ*QWIDLG Trigger: CCCGAGGTCGATCCATTGCCATTGCCCGCTGCTACT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGGAGGAGGCACACCATaGCGCTGTAGGACCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDGGGTP*RCRTCS Trigger: GGAGCAGGTCCTACAGCGCCATGGTGTGCCTCCTCC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAAGCTGGTGGAAGACCTaGGGGTTCTACAAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAASWWKT*GFYKAW Trigger: CCAGGCCTTGTAGAACCCCCAGGTCTTCCACCAGCT...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGAGATCTCAGTCCAGGTaGCAGCTACAGCAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMRSQSR*QLQQPP Trigger: AGGAGGCTGCTGTAGCTGTCACCTGGACTGAGATCT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGATCCGTGAACACCCCTaGCAGCACCTGCATAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMIREHP*QHLHRL Trigger: CAGTCTATGCAGGTGCTGTCAGGGGTGTTCACGGAT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATAGGCCTCCACATCCGTaGACACCCCTGACAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDRPPHP*TPLTAP Trigger: AGGTGCTGTCAGGGGTGTTCACGGATGTGGAGGCCT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCATTGGCAATGGTAGCCTaGATGGAGCTGATGGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAALAMVA*MELMGT Trigger: CGTGCCCATCAGCTCCATTCAGGCTACCATTGCCAA...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCATGCAGGAGACTTTCATaGCCTCCTCAGACACCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAACRRLS*PPQTPA Trigger: AGCGGGTGTCTGAGGAGGGCATGAAAGTCTCCTGCA...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGCACCTTGGCGAGGATaGGCTTTAGGTTTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGAPWRG*ALGFAA Trigger: TGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGGTCCCGCATCTCCTaGACCTTGGCGAGGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAWSRIS*TLARMR Trigger: GCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCA...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGTGGCCCTACCCCTaGATAGGGACTGCTTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAGWPYP*IGTAYN Trigger: ATTGTAAGCAGTCCCTATGCAGGGGTAGGGCCACCC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCATCCTGCTGCAACTGCTaGAGCCTCTCGGGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAASCCNC*SLSGCS Trigger: TGAACATCCCGAGAGGCTGCAGCAGTTGCAGCAGGA...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGTTCTTCCAGTCTTTCTaGATACGGCCCAGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGFFQSF*IRPSRE Trigger: CTCCCTGCTGGGCCGTATCCAGAAAGACTGGAAGAA...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGTCTGTGGGGTTTACTaGCAAGGGCTTCACCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAVCGVY*QGLHQG Trigger: CCCTTGGTGAAGCCCTTGCCAGTAAACCCCACAGAC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCACCTCATGGGCAGCCATaGGCACCAACTTGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAPHGQP*APTWQR Trigger: TCTTTGCCAAGTTGGTGCCCATGGCTGCCCATGAGG...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGTGATGTCATCCTTCTaGATCAGCTCTCGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGVMSSF*ISSRSC Trigger: GCAGCTCCGAGAGCTGATCCAGAAGGATGACATCAC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGGCCAGGAGAAAAGTaGAGAGGGGCAGTAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMGPGEK*RGAVVP Trigger: AGGAACTACTGCCCCTCTCCACTTTTCTCCTGGCCC...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGACTGGAAAGCCTGTaGGGATCCCAGGAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMGLESL*GSQEET Trigger: AGTTTCCTCCTGGGATCCCCACAGGCTTTCCAGTCC...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGTGGTGGAAGAATCCCTaGGGCCTGAGATGGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMWWKNP*GLRWEE Trigger: CTCTTCCCATCTCAGGCCCCAGGGATTCTTCCACCA...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCATACGGCATGACATCCTaGTGCCGGTTCTTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAYGMTS*CRFFRE Trigger: CTCCCTGAAGAACCGGCACCAGGATGTCATGCCGTA...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGACAGGGGTAGACTCTaGAAGGCTAGCTGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAADRGRL*KASWWK Trigger: CTTCCACCAGCTAGCCTTCCAGAGTCTACCCCTGTC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCGTTGAGTGTCCAGAGTaGATCCAGGAGGCTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIVECPE*IQEAEG Trigger: CCCCTCAGCCTCCTGGATCCACTCTGGACACTCAAC...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | ATTATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGGAGACAGGGGTTGCCTaGGGACCAAGGGGCCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IISAAQGWKNVRFLKGAEETGVA*GPRGLG Trigger: CCCTAGGCCCCTTGGTCCTCAGGCAACCCCTGTCTC...CTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGCACAAGAGAGCGCTTaGGGCTCTGATCCCGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDAQESA*GSDPGT Trigger: AGTTCCGGGATCAGAGCCTCAAGCGCTCTCTTGTGC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR TCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCAGATCCTGGGAGTCCTaGGGAAGGTGGTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIRSWES*GRWFFW Trigger: CCAGAAGAACCACCTTCCTCAGGACTCCCAGGATCT...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGACTTTCGAAGAACACTaGAGCCCTCAAAGTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKTFEEH*SPQSPG Trigger: CCCGGGACTTTGAGGGCTGCAGTGTTCTTCGAAAGT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCATGGGACACAGACTTaGCCGAGAAGATCTCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMHGTQT*PRRSQS Trigger: GGACTGAGATCTTCTCGGGCAAGTCTGTGTCCCATG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGCACACTGGAAGTGGGTaGAGGAGACTTTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELHTGSG*RRLSCP Trigger: AGGGCATGAAAGTCTCCTGCACCCACTTCCAGTGTG...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGTCAGGGGGCAAGCTaGGCAGCTCCTCAGGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRACQGAS*AAPQVC Trigger: ACACACCTGAGGAGCTGCGCAGCTTGCCCCCTGACA...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGAAGAGATGTGGATaGTGGAATGGAAGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAAGKRCG*WNGRGC Trigger: ACAGCCCCTTCCATTCCAGCATCCACATCTCTTCCC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCCCGACGGCCCTCAGCTaGATCTACCTTGGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAPTALS*IYLGRL Trigger: CAGCCTACCAAGGTAGATGCAGCTGAGGGCCGTCGG...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGCATCGTGTTCCTGTaGCTCTTGCAACTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMGIVFL*LLQLSP Trigger: TGGAGAGAGTTGCAAGAGGCACAGGAACACGATGCC...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGTAGGGAAATGGAGGTaGACAAGAGAGCGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELVGKWR*TRERLR Trigger: CCTCAAGCGCTCTCTTGTGCACCTCCATTTCCCTAC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGACGACAATAGGTGTGTaGAGGGGTCGCTGGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMTTIGV*RGRWCK Trigger: TTTGCACCAGCGACCCCTGCACACACCTATTGTCGT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGCAGAAAGTTCTGCTTaGTCATCCGCTGCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELAESSA*SSAAFP Trigger: GGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGCACACTGAAGGCCTGTaGGAAGTGTTCACGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKHTEGL*EVFTQV Trigger: TACCTGCGTGAACACTTCCCACAGGCCTTCAGTGTG...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGAGTGTATCCAGTGCTaGCACAGCCTCATGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGECIQC*HSLMVD Trigger: ATCTACCATGAGGCTGTGCCAGCACTGGATACACTC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCCATGGGCACCAACTTaGCAAAGATGTCAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMPWAPT*QRCQDL Trigger: CAGGTCCTGACATCTTTGCCAAGTTGGTGCCCATGG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATAGTGATGAGGCCTCATaGGCAGCCATGGGCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDSDEAS*AAMGTN Trigger: GTTGGTGCCCATGGCTGCCCATGAGGCCTCATCACT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCTGCATACTGCACGTTaGCCTCAGTCAGGGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDLHTAR*PQSGHG Trigger: TCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAG...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGCTGCATCAGTTGAGTaGGGCCTGAATAAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGAASVE*GLNKFQ Trigger: CTGGAACTTATTCAGGCCCCACTCAACTGATGCAGC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATTGTATAGGCAGGGGCTaGGTAGAGGACCGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDCIGRG*VEDRCR Trigger: CCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACA...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTACAGGCAGAGGCTGTaGTTGGGGAACAGATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKYRQRL*LGNRLR Trigger: CCTCAATCTGTTCCCCAACCACAGCCTCTGCCTGTA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTGTGCATGCACCTCCTaGATGAAGCGCAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELCACTS*MKRSRL Trigger: CAATCTGCTGCGCTTCATCCAGGAGGTGCATGCACA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCACCGCAGACTGGAAGTaGAAGTCACCGGCCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRATADWK*KSPASF Trigger: GAAGGAGGCCGGTGACTTTCACTTCCAGTCTGCGGT...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGCTGCATGGAGTCCATaGACTGATCTAGGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMAAWSP*TDLGPH Trigger: ATGAGGTCCTAGATCAGTTCATGGACTCCATGCAGC...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGTGGCAGAACTTGAGGTaGAGTTTTTCCTGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PDLRPAVHLHLAELKAAGWQNLR*SFSCSM Trigger: CATGCTGCAGGAAAAACTTCACCTCAAGTTCTGCCA...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCAGCATGGAGTGCAGTaGACCGAGGTTGTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMQHGVQ*TEVVEN Trigger: ATTCTCTACAACCTCGGTGCACTGCACTCCATGCTG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGATTCCAAGGCCCGGCATaGCTCCTTATAGTAATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGFQGPA*LLIVIY Trigger: GTAGATTACTATAAGGAGGCATGCCGGGCCTTGGAA...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGAGAGTAAGTATAGGGTaGAGGCAGAGGCTGCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKRVSIG*RQRLLG Trigger: ACCAAGCAGCCTCTGCCTGCACCCTATACTTACTCT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCAGAAGACAGAAGGTCTaGAGCTGCAGCACCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRARRQKV*SCSTSA Trigger: CGCCGAGGTGCTGCAGCTGCAGACCTTCTGTCTTCT...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTGTTCCTGTGCCTCTTaGAACTCTCTCCAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELCSCAS*NSLQMA Trigger: TGCCATCTGGAGAGAGTTGCAAGAGGCACAGGAACA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATTGCCCGTTGTGGGCCTaGAGAAAGTTCTGCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDCPLWA*RKFCLL Trigger: GAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCA...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTTGAGCGTAAGGATCTaGCGACTCATGTCCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELLSVRI*RLMSTL Trigger: CAGTGTGGACATGAGTCGCCAGATCCTTACGCTCAA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTCTCCCGAAGCAGTTTaGCCTTCTCCTCACTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKSPEAV*PSPHCT Trigger: TGTACAGTGAGGAGAAGGCCAAACTGCTTCGGGAGA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAAAGTCCTTGCCTTCTTaGGACTTCTTCATCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPAVHLHLAELKAAGMGKSLPS*DFFIRS Trigger: GGACCTGATGAAGAAGTCCCAAGAAGGCAAGGACTT...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCTTACAATTCCATGCTaGGGAGAGGATCTGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMLTIPC*GEDLGT Trigger: CGTACCCAGATCCTCTCCCCAGCATGGAATTGTAAG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCATGGTAGGGTGTTGGTaGTGGTGGTGGAAGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIMVGCW*WWWKNP Trigger: GGGATTCTTCCACCACCACCACCAACACCCTACCAT...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCGGAAGGTGGTTCTTCTaGCTGATGTTCACACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLIGRWFF*LMFTLA Trigger: GGCCAGTGTGAACATCAGCCAGAAGAACCACCTTCC...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATAGGCCTGCTCGTACTTaGTGTCTTCATGGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDRPART*CLHGTQ Trigger: CTGTGTCCCATGAAGACATCAAGTACGAGCAGGCCT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGACTCATGTCCACACTaGAGGCCTGTGGGAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDDSCPH*RPVGSV Trigger: AACACTTCCCACAGGCCTTCAGTGTGGACATGAGTC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGAGGTTCATAGCACGATaGAGCTCACTGTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKRFIAR*SSLLVK Trigger: CTTCACCAACAGTGAGCTGCATCGTGCTATGAACCT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCACGCAAGTTACCAACATaGAGGTTCATAGCACGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EPDLRPAVHLHLAELKAARKLPT*RFIARC Trigger: GCATCGTGCTATGAACCTGCATGTTGGTAACTTGCG...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCAGGCCGAGGTGGTGGTaGCTTCTTCTTCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRARPRWW*LLLQLS Trigger: AGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCT...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATAGGACCTGTAACAGCTaGGTCTGTGGGGTTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDRTCNS*VCGVYW Trigger: CCAGTAAACCCCACAGACCCAGCTGTTACAGGTCCT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCGCATCTCCTGCACCTTaGCGAGGATGCGCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAASPAP*RGCALG Trigger: ACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGC...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGTCCAAGGACACACGCTaGTCCCGCATCTCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IISAAQGWKNVRFLKGAESKDTR*SRISCT Trigger: GGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGA...CTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGAGATAGTGGGTTGCTaGGCCTGTGGAACTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDEIVGC*ACGTRE Trigger: TTCCCTAGTTCCACAGGCCCAGCAACCCACTATCTC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCCTGTTGTGTGGGTTGTaGCCCAAATGCTGGCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRALLCGL*PKCWPL Trigger: CAACGGCCAGCATTTGGGCCACAACCCACACAACAG...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATATAATCATCTTTGCCTaGGCGCAGCACCACACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDIIIFA*AQHHTV Trigger: AACCGTGTGGTGCTGCGCTCAGGCAAAGATGATTAT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTGCAATTTCTGCTCTTaGAGCTCATCTTCCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGAEPDLRPAVHLHLAELCNFCS*SSSSSS Trigger: ACTGGAGGAAGATGAGCTGCAAGAGCAGAAATTGCA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGAAGGAAGCCTTTTCATaGACTTCCATGTACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKKEAFS*TSMYLA Trigger: GGCCAAGTACATGGAAGTGCATGAAAAGGCTTCCTT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCGCTGCACACTGGAAGTaGGTGCAGGAGACTTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAAAHWK*VQETFM Trigger: CATGAAAGTCTCCTGCACCCACTTCCAGTGTGCAGC...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGAGACCCTGCCCGTTGTaGGCCTGCAGAAAGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IISAAQGWKNVRFLKGAERPCPL*ACRKFC Trigger: GCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCT...CTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCCTGCTTACAATTCCATaGTGGGGAGAGGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRALLTIP*WGEDLG Trigger: ACCCAGATCCTCTCCCCAGCATGGAATTGTAAGCAG...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCTCGTTGTAGGCTTCTaGGTTCTCTCCATAATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMLVVGF*VLSIIL Trigger: AAGAATTATGGAGAGAACCCAGAAGCCTACAACGAG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATTACTTGATGTCTTCATaGGACACAGACTTGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDYLMSS*DTDLPE Trigger: CTCGGGCAAGTCTGTGTCCCATGAAGACATCAAGTA...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTCTTATCTTCAATTTTaGCCAGCATCTCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GAEPDLRPAVHLHLAELKSYLQF*PASPEA Trigger: TGCTTCGGGAGATGCTGGCCAAAATTGAAGATAAGA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCAGCATGACAATGACTaGCACTTTCTGTTCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDQHDND*HFLFMH Trigger: GTGCATGAACAGAAAGTGTCAGTCATTGTCATGCTG...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGTCATACTTCTTCAGCTaGTCCTCAAACAGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLRPAVHLHLAELKAAGMSYFFS*SSNSFF Trigger: GAAGAAACTGTTTGAGGAGCAGCTGAAGAAGTATGA...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCCTTGCTTTCCAAGTCTaGATAAAAGTCCTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGKMSGSSREQSLILAFQV*IKVLAF Trigger: GAAGGCAAGGACTTTTATGCAGACTTGGAAAGCAAG...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR CCA 90 bp | ATTATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGAAGAGGGTCTTGAGATaGGCCTGGATAGAGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IISAAQGWKNVRFLKGAEKRVLR*AWIELG Trigger: ACCCAGCTCTATCCAGGCCCATCTCAAGACCCTCTT...CTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS-3UTR GCA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCCTGGTGCAAATAATGTaGATGCACCTCCTGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFSSPGLEKCQVPQGSRALVQIM*MHLLDE Trigger: TTCATCCAGGAGGTGCATGCACATTATTTGCACCAG...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 90 bp | ACGGCGGGACAGCAATGGCTTTGGGGCTGTAGGCCGAGGTGGTGGTaGCTTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTGGCGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAGQQWLWGCRPRWW*LLLQLSVQELLASG Trigger: GCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 90 bp | GGCCGAGGTGGTGGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAGCTaGTGGCGAGCGGCCTCTTGGGCACGACAGATGGATTGTGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGAFFFSSLSRS*WRAASWARQMDCAR Trigger: ACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 90 bp | AGGAGGCTGAGGGGGTCATCCGTAGGCTGGGCAGCCCTTAGACCCTaGCCGTTGTGGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRLRGSSVGWAALRP*PLWACRKFCLLIRC Trigger: GCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCTCAGCCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS CCA 90 bp | CTCACGGCGGGACAGCAATGGCTTTGGGGCTGTAGGCCGAGGTGGTaGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTAGQQWLWGCRPRW*CLLLQLSVQELLAS Trigger: GCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | CTCCTCACGGCGGGACAGCAATGGCTTTGGGGCTGTAGGCCGAGGTaGTGGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LLTAGQQWLWGCRPR*WCLLLQLSVQELLA Trigger: CGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGTGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | AGCCTCCACTGCCTCCCCCTCCTCACGGCGGGACAGCAATGGCTTTaGGGCTGTAGGCCGAGGTGGTGGTGCCTTCTTCTTCAGCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLHCLPLLTAGQQWL*GCRPRWWCLLLQLS Trigger: AGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGTGAGGAGGGGGAGGCAGTGGAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GTGTTTCCTCTGCTGCCGCATCCGCCTCACCAGCTGGGGCAGCTCTaGAATCCCATTCCCAGCCTCCACCTCCTGCACGGCTGCATAGAG | + |
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Preference number: 5 (lower is better) Translates to: VFPLLPHPPHQLGQL*NPIPSLHLLHGCIE Trigger: CTCTATGCAGCCGTGCAGGAGGTGGAGGCTGGGAATGGGATTCCAGAGCTGCCCCAGCTGGTGAGGCGGATGCGGCAGCAGAGGAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAAGGGCACGGAGGACATaGTCCTGGGCGGCCAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LRPAVHLHLAELKAAGMGRARRT*SWAARF Trigger: GAACCTGGCCGCCCAGGACAATGTCCTCCGTGCCCT...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CACTTTTGGTCCAGCTCACTAAGCACCCGCCGCACGGCTGCATACTaGACGTTGGCCTCAGTCAGGGCACGGAGGACATTGTCCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HFWSSSLSTRRTAAY*TLASVRARRTLSWA Trigger: CGCCCAGGACAATGTCCTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGAGCTGGACCAAAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | CGAGGTGGTGGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTaGCGAGCGGCCTCTTGGGCACGACAGATGGATTGTGCCCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGGAFFFSSLSRSC*RAASWARQMDCARS Trigger: GGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | AGGGGGTCATCCGTAGGCTGGGCAGCCCTTAGACCCTGCCCGTTGTaGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTGCTTTCCCCGT | + |
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Preference number: 5 (lower is better) Translates to: RGSSVGWAALRPCPL*ACRKFCLLIRCFPR Trigger: ACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | AGTGTCCAGAGTGGATCCAGGAGGCTGAGGGGGTCATCCGTAGGCTaGGCAGCCCTTAGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SVQSGSRRLRGSSVG*AALRPCPLWACRKF Trigger: GAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCTCAGCCTCCTGGATCCACTCTGGACACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GGGCCAGCCCCGGCCTGGCCCAGGGTCTCCTGCAATTTCTGCTCTTaGAGCTCATCTTCCTCCAGTAGATCCCTGATGTCCTTCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GPAPAWPRVSCNFCS*SSSSSSRSLMSFRE Trigger: CTCCCTGAAGGACATCAGGGATCTACTGGAGGAAGATGAGCTGCAAGAGCAGAAATTGCAGGAGACCCTGGGCCAGGCCGGGGCTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | TGGTCCCGCATCTCCTGCACCTTGGCGAGGATGCGCTTTAGGTTTTaGAGCACGGCTTTGTCCTCTGGGGTGAGGGCTGGTGTGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: WSRISCTLARMRFRF*STALSSGVRAGVGR Trigger: CCTACCCACACCAGCCCTCACCCCAGAGGACAAAGCCGTGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CAACTCCGATGTATAGGCAGGGGCTGGGTAGAGGACCGTTGCAGGTaGCATGGGAACTGCAGCCCTAGGCTGCATCAGTTGAGTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QLRCIGRGWVEDRCR*HGNCSPRLHQLSGA Trigger: GGCCCCACTCAACTGATGCAGCCTAGGGCTGCAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACATCGGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | ACCTCCATGCTGGCTCTCAGGGCTAGAAGACAGAAGGTCTGCAGCTaGAGCACCTCGGCGCAAACAAGGTGGTGGCTCGGCTGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSMLALRARRQKVCS*STSAQTRWWLGCWR Trigger: CCTCCAACAGCCGAGCCACCACCTTGTTTGCGCCGAGGTGCTGCAGCTGCAGACCTTCTGTCTTCTAGCCCTGAGAGCCAGCATGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CTGGGTACCTCCATGCTGGCTCTCAGGGCTAGAAGACAGAAGGTCTaGAGCTGCAGCACCTCGGCGCAAACAAGGTGGTGGCTCGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LGTSMLALRARRQKV*SCSTSAQTRWWLGC Trigger: ACAGCCGAGCCACCACCTTGTTTGCGCCGAGGTGCTGCAGCTGCAGACCTTCTGTCTTCTAGCCCTGAGAGCCAGCATGGAGGTACCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | AGAGGATCTGGGTACGAGGCCCAACTCCGATGTATAGGCAGGGGCTaGGTAGAGGACCGTTGCAGGTGCCATGGGAACTGCAGCCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: RGSGYEAQLRCIGRG*VEDRCRCHGNCSPR Trigger: CCTAGGGCTGCAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACATCGGAGTTGGGCCTCGTACCCAGATCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GTGGTAGCTGGCCGAACTGTCATGGCTAACTCGGGTCCTGAGAGCTaGGGAGGTGGAGCAGAGGGAAGACCTACAACTGGTTGGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVAGRTVMANSGPES*GGGAEGRPTTGWGG Trigger: GCCACCCCAACCAGTTGTAGGTCTTCCCTCTGCTCCACCTCCCCAGCTCTCAGGACCCGAGTTAGCCATGACAGTTCGGCCAGCTACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGATCCTCAGACACCCGCTaGTCCATAGCCCCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRPAVHLHLAELKAAGMGSSDTR*SIAPSM Trigger: CATGCTGGGGGCTATGGACAAGCGGGTGTCTGAGGA...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGCTGGGTAGAGGACCGTaGCAGGTGCCATGGGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PDLRPAVHLHLAELKAAGLGRGP*QVPWEL Trigger: CAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAG...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGAATGGAGACAGGGGTaGCCTGAGGACCAAGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: EPDLRPAVHLHLAELKAAEWRQG*PEDQGA Trigger: GGCCCCTTGGTCCTCAGGCAACCCCTGTCTCCATTC...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | TCCAAGCCACCTAGGGGCCGGATGCTGAGCTTGGCAATGGTAGCCTaGATGGAGCTGATGGGCACGTCTCCACCAAGGACCAGATCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SKPPRGRMLSLAMVA*MELMGTSPPRTRSW Trigger: CCAGGATCTGGTCCTTGGTGGAGACGTGCCCATCAGCTCCATTCAGGCTACCATTGCCAAGCTCAGCATCCGGCCCCTAGGTGGCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS GCA 90 bp | ACGGCCCAGCAGGGAGGCAGTATCAGGGTTTTCCAAGGCCCGGCATaGCTCCTTATAGTAATCTACCACCTGTGCGCTGATGCGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAQQGGSIRVFQGPA*LLIVIYHLCADAGH Trigger: GTGGCCCGCATCAGCGCACAGGTGGTAGATTACTATAAGGAGGCATGCCGGGCCTTGGAAAACCCTGATACTGCCTCCCTGCTGGGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GGAGTTCCACTTTTGGTCCAGCTCACTAAGCACCCGCCGCACGGCTaGATACTGCACGTTGGCCTCAGTCAGGGCACGGAGGACATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVPLLVQLTKHPPHG*ILHVGLSQGTEDIV Trigger: GACAATGTCCTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGAGCTGGACCAAAAGTGGAACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GAGGCCCAACTCCGATGTATAGGCAGGGGCTGGGTAGAGGACCGTTaGAGGTGCCATGGGAACTGCAGCCCTAGGCTGCATCAGTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: EAQLRCIGRGWVEDR*RCHGNCSPRLHQLS Trigger: ACTCAACTGATGCAGCCTAGGGCTGCAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACATCGGAGTTGGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CAGCACTCGCTCCACATGGGTCTCAGTAGTACGAATACTGCTCAGTaGCACGCTCAGGGCTCCATGCACCATGGGCTGGCCCCTCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: QHSLHMGLSSTNTAQ*HAQGSMHHGLAPLC Trigger: ACAGAGAGGGGCCAGCCCATGGTGCATGGAGCCCTGAGCGTGGCACTGAGCAGTATTCGTACTACTGAGACCCATGTGGAGCGAGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGTGTCGGGCTGGCCCTaGGCCAACTTGATGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKVSGWP*ANLMAS Trigger: TGAAGCCATCAAGTTGGCCAAGGGCCAGCCCGACAC...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGCGCATCTCCTGCACCTaGGCGAGGATGCGCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLRPAVHLHLAELKAAGMRISCT*ARMRFR Trigger: CCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCG...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGTGGTGGCTCGGCTGTaGGAGGTCTTGAAGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: PDLRPAVHLHLAELKAAGVVARL*EVLKVL Trigger: CAGTACCTTCAAGACCTCCAACAGCCGAGCCACCAC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGATGAAGCGCAGCAGATaGCCAGGGCTGTCTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKMKRSR*PGLSGR Trigger: CCTGCCAGACAGCCCTGGCAATCTGCTGCGCTTCAT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | CATCTTTGCCTGAGCGCAGCACCACACGGTTGCTGTCATACGGCATaGCATCCTGGTGCCGGTTCTTCAGGGAGTAGCAGCGGGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: HLCLSAAPHGCCHTA*HPGAGSSGSSSGQW Trigger: CCATTGCCCGCTGCTACTCCCTGAAGAACCGGCACCAGGATGTCATGCCGTATGACAGCAACCGTGTGGTGCTGCGCTCAGGCAAAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GCAGCGGGCAATGGCAATGGATCGACCTCGGGCATCGTGTTCCTGTaGCTCTTGCAACTCTCTCCAGATGGCATCCAGTGCTCCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AAGNGNGSTSGIVFL*LLQLSPDGIQCSCI Trigger: GATGCAGGAGCACTGGATGCCATCTGGAGAGAGTTGCAAGAGGCACAGGAACACGATGCCCGAGGTCGATCCATTGCCATTGCCCGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GCTGCTGTTCCAAGGACACACGCTGGTCCCGCATCTCCTGCACCTTaGCGAGGATGCGCTTTAGGTTTTGCAGCACGGCTTTGTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAVPRTHAGPASPAP*RGCALGFAARLCPL Trigger: CAGAGGACAAAGCCGTGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | TTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTGGCGAGCGGCCTCTTaGGCACGACAGATGGATTGTGCCCGTTCCAGAAGGGTAGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: FFFSSLSRSCWRAAS*ARQMDCARSRRVAT Trigger: GGTAGCTACCCTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GGGGTAGGGTTTGGCCGTGGTGCCGTGTGGCTAGAGATAGGGGCTTaGACACTATCTACTGTGGTGGTAGCTGGCCGAACTGTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVGFGRGAVWLEIGA*TLSTVVVAGRTVMA Trigger: AGCCATGACAGTTCGGCCAGCTACCACCACAGTAGATAGTGTCCAAGCCCCTATCTCTAGCCACACGGCACCACGGCCAAACCCTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | CATCCTGGTGCCGGTTCTTCAGGGAGTAGCAGCGGGCAATGGCAATaGATCGACCTCGGGCATCGTGTTCCTGTGCCTCTTGCAACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPGAGSSGSSSGQWQ*IDLGHRVPVPLATL Trigger: GAGAGTTGCAAGAGGCACAGGAACACGATGCCCGAGGTCGATCCATTGCCATTGCCCGCTGCTACTCCCTGAAGAACCGGCACCAGGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAAAAGCGAAGTGCATCTaGCACAGTGTCGGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EPDLRPAVHLHLAELKAAKAKCI*HSVGLA Trigger: GGCCAGCCCGACACTGTGCAAGATGCACTTCGCTTT...TGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAGCCATGGGCACCAACTaGGCAAAGATGTCAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LRPAVHLHLAELKAAGMGAMGTN*AKMSGP Trigger: AGGTCCTGACATCTTTGCCAAGTTGGTGCCCATGGC...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATTCTGCAAGCTCAGCCTaGGCAACAGAGGGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDSASSA*ATEGPG Trigger: CCCTGGCCCCTCTGTTGCCAAGGCTGAGCTTGCAGA...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCAAGACCTACAACTGGTaGGGGTGGCCCTACCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QQPRAGKMSGSSREQSLIKTYNW*GWPYPC Trigger: GCAGGGGTAGGGCCACCCCAACCAGTTGTAGGTCTT...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGTGGGGGAAGAGGGTCTaGAGATGGGCCTGGATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DLRPAVHLHLAELKAAGMWGKRV*RWAWIE Trigger: CTCTATCCAGGCCCATCTCAAGACCCTCTTCCCCCA...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGCGCAGCACCACACGGTaGCTGTCATACGGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKRSTTR*LSYGMT Trigger: TGTCATGCCGTATGACAGCAACCGTGTGGTGCTGCG...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGCTTAGACCCTGCCCGTaGTGGGCCTGCAGAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKLRPCP*WACRKF Trigger: GAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAG...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | GGCCAAGTAGGGAAATGGAGGTGCACAAGAGAGCGCTTGAGGCTCTaGTCCCGGAACTGCAGACTCAGCACTCGCTCCACATGGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GQVGKWRCTRERLRL*SRNCRLSTRSTWVS Trigger: TGAGACCCATGTGGAGCGAGTGCTGAGTCTGCAGTTCCGGGATCAGAGCCTCAAGCGCTCTCTTGTGCACCTCCATTTCCCTACTTGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | ACCAGAGAGGCAGTGATGTCATCCTTCTGGATCAGCTCTCGGAGCTaGTGTTCCAAGGACACACGCTGGTCCCGCATCTCCTGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TREAVMSSFWISSRS*CSKDTRWSRISCTL Trigger: CAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCAGCTCCGAGAGCTGATCCAGAAGGATGACATCACTGCCTCTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CAGGAGCTGCTGGCGAGCGGCCTCTTGGGCACGACAGATGGATTGTaGCCGTTCCAGAAGGGTAGCTACCTTGCTTTCCAAGTCTGCATA | + |
|
Preference number: 5 (lower is better) Translates to: QELLASGLLGTTDGL*PFQKGSYLAFQVCI Trigger: TATGCAGACTTGGAAAGCAAGGTAGCTACCCTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | TCCTTCTGGATCAGCTCTCGGAGCTGCTGTTCCAAGGACACACGCTaGTCCCGCATCTCCTGCACCTTGGCGAGGATGCGCTTTAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFWISSRSCCSKDTR*SRISCTLARMRFRF Trigger: AAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCAGCTCCGAGAGCTGATCCAGAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GTAGGGTGTTGGTGGTGGTGGTGGAAGAATCCCTGGGGCCTGAGATaGGAAGAGATGTGGATGCTGGAATGGAAGGGGCTGTTGTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGCWWWWWKNPWGLR*EEMWMLEWKGLLCG Trigger: CCCACACAACAGCCCCTTCCATTCCAGCATCCACATCTCTTCCCATCTCAGGCCCCAGGGATTCTTCCACCACCACCACCAACACCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGGGAATCTCCCGAAGCAGTTaGGCCTTCTCCTCACTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRPAVHLHLAELKAAGMGISRSS*AFSSLY Trigger: GTACAGTGAGGAGAAGGCCAAACTGCTTCGGGAGAT...TCCCATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGTGGTTGGGGAACAGATaGAGGTACAGGCTGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLRPAVHLHLAELKAAGMWLGNR*RYRLRH Trigger: GTGCCTCAGCCTGTACCTCAATCTGTTCCCCAACCA...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGAATGGAAGGGGCTGTaGTGTGGGTTGTGGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKEWKGL*CGLWPK Trigger: TTTGGGCCACAACCCACACAACAGCCCCTTCCATTC...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CGCACCTGGTCCAGTGGTCCACTGAGCAGGCGCAAGTTACCAACATaGAGGTTCATAGCACGATGCAGCTCACTGTTGGTGAAGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTWSSGPLSRRKLPT*RFIARCSSLLVKEA Trigger: GGCTTCCTTCACCAACAGTGAGCTGCATCGTGCTATGAACCTGCATGTTGGTAACTTGCGCCTGCTCAGTGGACCACTGGACCAGGTGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | TGGGCAGCCCTTAGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTaGTTGCTCATCCGCTGCTTTCCCCGTAAAGAACTGTCCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAALRPCPLWACRKF*LLIRCFPRKELSSE Trigger: TTCACTGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | AGCCATGGGCACCAACTTGGCAAAGATGTCAGGACCTGTAACAGCTaGGTCTGTGGGGTTTACTGGCAAGGGCTTCACCAAGGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHGHQLGKDVRTCNS*VCGVYWQGLHQGSS Trigger: GGAGCTCCCTTGGTGAAGCCCTTGCCAGTAAACCCCACAGACCCAGCTGTTACAGGTCCTGACATCTTTGCCAAGTTGGTGCCCATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTCATGGGACACAGACTaGCCCGAGAAGATCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGAEPDLRPAVHLHLAELSWDTD*PEKISV Trigger: GACTGAGATCTTCTCGGGCAAGTCTGTGTCCCATGA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGCAGGCCTGCTCGTACTaGATGTCTTCATGGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: KGAEPDLRPAVHLHLAELQACSY*MSSWDT Trigger: TGTGTCCCATGAAGACATCAAGTACGAGCAGGCCTG...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGTTCCCCAAATTTCTGTaGCTCCTCAGCCTGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKFPKFL*LLSLLP Trigger: GGGAAGCAGGCTGAGGAGCAACAGAAATTTGGGGAA...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCAGGCAGAGGCTGTGGTaGGGGAACAGATTGAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QQPRAGKMSGSSREQSLIRQRLW*GNRLRY Trigger: GTACCTCAATCTGTTCCCCAACCACAGCCTCTGCCT...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCTCAGCTGCATCTACCTaGGTAGGCTGTAGCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QQPRAGKMSGSSREQSLISAAST*VGCSKG Trigger: GCCCTTGCTACAGCCTACCAAGGTAGATGCAGCTGA...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGGTAACGCGCCACCTTTaGCTTTTCCATCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KGAEPDLRPAVHLHLAELVTRHL*LFHLSL Trigger: GAGGCTGAGATGGAAAAGCAAAAGGTGGCGCGTTAC...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | AAGGGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGTGCAGAAAGTTCTGCTaGCTCATCCGCTGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KGAEPDLRPAVHLHLAELCRKFC*LIRCFP Trigger: GGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCA...CAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | ATCCCTGATGTCCTTCAGGGAGGCCTCCACATCCGTGAACACCCCTaGCAGCACCTGCATAGACTGGACAAGGTTCTTGACAGTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPDVLQGGLHIREHP*QHLHRLDKVLDSVR Trigger: CCTGACACTGTCAAGAACCTTGTCCAGTCTATGCAGGTGCTGTCAGGGGTGTTCACGGATGTGGAGGCCTCCCTGAAGGACATCAGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GTGTACGACAATAGGTGTGTGCAGGGGTCGCTGGTGCAAATAATGTaGATGCACCTCCTGGATGAAGCGCAGCAGATTGCCAGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VYDNRCVQGSLVQIM*MHLLDEAQQIARAV Trigger: GACAGCCCTGGCAATCTGCTGCGCTTCATCCAGGAGGTGCATGCACATTATTTGCACCAGCGACCCCTGCACACACCTATTGTCGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | GGCAAAGATGTCAGGACCTGTAACAGCTGGGTCTGTGGGGTTTACTaGCAAGGGCTTCACCAAGGGAGCTCCTTTCACAGGCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKDVRTCNSWVCGVY*QGLHQGSSFHRLEC Trigger: ACACTCCAGCCTGTGAAAGGAGCTCCCTTGGTGAAGCCCTTGCCAGTAAACCCCACAGACCCAGCTGTTACAGGTCCTGACATCTTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGAGCATGAGGTTGACATaGAGCGTAAGGATCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: DLRPAVHLHLAELKAAGMSMRLT*SVRIWR Trigger: TCGCCAGATCCTTACGCTCAATGTCAACCTCATGCT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATCTGGCCCAGCATGAGGTaGACATTGAGCGTAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: QQPRAGKMSGSSREQSLIWPSMR*TLSVRI Trigger: GATCCTTACGCTCAATGTCAACCTCATGCTGGGCCA...GATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAGCCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGATGGCTTCATTAAGCTaGTCCAGGGCACTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAEPDLRPAVHLHLAELKMASLS*SRALWK Trigger: CTTCCAGAGTGCCCTGGACAAGCTTAATGAAGCCAT...CTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGGCTCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTaGTTTCCCCGTAAAGAACTGTCCAGTGAAAATGCTTCTGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCPLWACRKFCLLIR*FPRKELSSENASGV Trigger: GACTCCAGAAGCATTTTCACTGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS GCA 90 bp | CAGCCCTTAGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTGCTTaGTCATCCGCTGCTTTCCCCGTAAAGAACTGTCCAGTGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: QPLDPARCGPAESSA*SSAAFPVKNCPVKM Trigger: CATTTTCACTGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGCACTTCCATGTACTaGGCCCATTCTCGCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: YFSSPGLEKCQVPQGSRACTSMY*AHSRLT Trigger: GGTGAGGCGAGAATGGGCCAAGTACATGGAAGTGCA...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | GATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGATGAAAGTCCTTGCCTTCTaGGGACTTCTTCATCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLRPAVHLHLAELKAAGMKVLAF*GLLHQV Trigger: GACCTGATGAAGAAGTCCCAAGAAGGCAAGGACTTT...CATCCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GGCAGAATTATATTTGCCCCCGATGACATCCATAGCAAAGCGAAGTaGATCTTGCACAGTGTCGGGCTGGCCCTTGGCCAACTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRIIFAPDDIHSKAK*ILHSVGLALGQLDG Trigger: GCCATCAAGTTGGCCAAGGGCCAGCCCGACACTGTGCAAGATGCACTTCGCTTTGCTATGGATGTCATCGGGGGCAAATATAATTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GGGCTTCACCAAGGGAGCTCCTTTCACAGGCTGGAGTGTATCCAGTaGTGGCACAGCCTCATGGTAGATAAAGTCATTGTCCTTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLHQGSSFHRLECIQ*WHSLMVDKVIVLLG Trigger: GCCAAGAAGGACAATGACTTTATCTACCATGAGGCTGTGCCAGCACTGGATACACTCCAGCCTGTGAAAGGAGCTCCCTTGGTGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | ATTATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGTTTTGCAGCACGGCTTaGTCCTCTGGGGTGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IISAAQGWKNVRFLKGAEFCSTA*SSGVRA Trigger: AGCCCTCACCCCAGAGGACAAAGCCGTGCTGCAAAA...CTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATGCTAGAGATAGGGGCTaGGACACTATCTACTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDARDRG*DTIYCG Trigger: ACCACAGTAGATAGTGTCCAAGCCCCTATCTCTAGC...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | AGTGCAGTGCACCGAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCTTCATGGGACACAGACTTGCCCGAGAAGATCTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVHRGCREYRPART*CLHGTQTCPRRSQS Trigger: GGACTGAGATCTTCTCGGGCAAGTCTGTGTCCCATGAAGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTCGGTGCACTGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | CGAGAGCCCCTCCACACAGCTAGCATTAATATAATCATCTTTGCCTaGGCGCAGCACCACACGGTTGCTGTCATACGGCATGACATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: REPLHTASINIIIFA*AQHHTVAVIRHDIL Trigger: CAGGATGTCATGCCGTATGACAGCAACCGTGTGGTGCTGCGCTCAGGCAAAGATGATTATATTAATGCTAGCTGTGTGGAGGGGCTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCAGAAAGCTCTTCCGGTaGTCCAACATGGACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFSSPGLEKCQVPQGSRARKLFR*SNMDFS Trigger: GGAGAAGTCCATGTTGGACAACCGGAAGAGCTTTCT...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | CCTGATCTGAGGCCTGCAGTGCATCTCCATCTGGCAGAGCTGAAGGCAGCAGGGGTAGTAGATCTTCATTaGGACAAGTTTCTTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PDLRPAVHLHLAELKAAGVVDLH*DKFLPV Trigger: GACTGGAAGAAACTTGTCCAAATGAAGATCTACTAC...CCCTGCTGCCTTCAGCTCTGCCAGATGGAGATGCACTGCAGGCCTCAGATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TATTTCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGGCCCTTGGCCAACTaGATGGCTTCATTAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFSSPGLEKCQVPQGSRAWPLAN*MASLSL Trigger: CAAGCTTAATGAAGCCATCAAGTTGGCCAAGGGCCA...GGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | TTCATAGCACGATGCAGCTCACTGTTGGTGAAGGAAGCCTTTTCATaGACTTCCATGTACTTGGCCCATTCTCGCCTCACCTCTGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FIARCSSLLVKEAFS*TSMYLAHSRLTSAS Trigger: GCTTGCAGAGGTGAGGCGAGAATGGGCCAAGTACATGGAAGTGCATGAAAAGGCTTCCTTCACCAACAGTGAGCTGCATCGTGCTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | CCACTGAGCAGGCGCAAGTTACCAACATGCAGGTTCATAGCACGATaGAGCTCACTGTTGGTGAAGGAAGCCTTTTCATGCACTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PLSRRKLPTCRFIAR*SSLLVKEAFSCTSM Trigger: CATGGAAGTGCATGAAAAGGCTTCCTTCACCAACAGTGAGCTGCATCGTGCTATGAACCTGCATGTTGGTAACTTGCGCCTGCTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | AGGGCCAGTGAGGTGCTGCTTGGTCCCTATAGAGTAAGTATAGGGTaGAGGCAGAGGCTGCTTGGTCCCTATAGAATAAGTATAGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RASEVLLGPYRVSIG*RQRLLGPYRISIGY Trigger: GTACCCTATACTTATTCTATAGGGACCAAGCAGCCTCTGCCTGCACCCTATACTTACTCTATAGGGACCAAGCAGCACCTCACTGGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | CTTCACCAAGGGAGCTCCTTTCACAGGCTGGAGTGTATCCAGTGCTaGCACAGCCTCATGGTAGATAAAGTCATTGTCCTTCTTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHQGSSFHRLECIQC*HSLMVDKVIVLLGR Trigger: TCTGCCAAGAAGGACAATGACTTTATCTACCATGAGGCTGTGCCAGCACTGGATACACTCCAGCCTGTGAAAGGAGCTCCCTTGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 90 bp | CTGCTTGGTCCCTATAGAATAAGTATAGGGTACAGGCAGAGGCTGTaGTTGGGGAACAGATTGAGGTACAGGCTGAGGCACTGGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGPYRISIGYRQRL*LGNRLRYRLRHWKA Trigger: TGCTTTCCAGTGCCTCAGCCTGTACCTCAATCTGTTCCCCAACCACAGCCTCTGCCTGTACCCTATACTTATTCTATAGGGACCAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 90 bp | GGATTGTGCCCGTTCCAGAAGGGTAGCTACCTTGCTTTCCAAGTCTaGATAAAAGTCCTTGCCTTCTTGGGACTTCTTCATCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLCPFQKGSYLAFQV*IKVLAFLGLLHQVL Trigger: GAGGACCTGATGAAGAAGTCCCAAGAAGGCAAGGACTTTTATGCAGACTTGGAAAGCAAGGTAGCTACCCTTCTGGAACGGGCACAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCCCAGGGCTGGAAAAATGTCAGGTTCCTCAAGGGAGCAGAGCCTGATAAGTCATTGTCCTTCTaGGCAGAATTATATTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAAQGWKNVRFLKGAEPDKSLSF*AELYLP Trigger: GGGCAAATATAATTCTGCCAAGAAGGACAATGACTT...ATCAGGCTCTGCTCCCTTGAGGAACCTGACATTTTTCCAGCCCTGGGCTGCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | AAGTTGTCCACTGTCTCAGGGTCCAGCTGCATGGAGTCCATGAACTaGTCTAGGACCTCATTCTTATCTTCAATTTTGGCCAGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLSTVSGSSCMESMN*SRTSFLSSILASIS Trigger: GGAGATGCTGGCCAAAATTGAAGATAAGAATGAGGTCCTAGATCAGTTCATGGACTCCATGCAGCTGGACCCTGAGACAGTGGACAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 90 bp | CATCCAAGTTGTCCACTGTCTCAGGGTCCAGCTGCATGGAGTCCATaGACTGATCTAGGACCTCATTCTTATCTTCAATTTTGGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPSCPLSQGPAAWSP*TDLGPHSYLQFWPA Trigger: TGCTGGCCAAAATTGAAGATAAGAATGAGGTCCTAGATCAGTTCATGGACTCCATGCAGCTGGACCCTGAGACAGTGGACAACTTGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GGGGTGAGGGCTGGTGTGGGTAGGGCAGCCCGCACCTaGTCCAGTGGTCCACTGAGCAGGCGCAAGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GVRAGVGRAART*SSGPLSRRKLP Trigger: TGGTAACTTGCGCCTGCTCAGTGGACCACTGGACCAGGTGCGGGCTGCCCTACCCACACCAGCCCTCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | CTCCACTGCCTCCCCCTCCTCACGGCGGGACAGCAATaGCTTTGGGGCTGTAGGCCGAGGTGGTGGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHCLPLLTAGQQ*LWGCRPRWWCL Trigger: AAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGTGAGGAGGGGGAGGCAGTGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | AGTGGATCCAGGAGGCTGAGGGGGTCATCCGTAGGCTaGGCAGCCCTTAGACCCTGCCCGTTGTGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGSRRLRGSSVG*AALRPCPLWAC Trigger: GCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCTCAGCCTCCTGGATCCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | AGGGCCTGTGGCCGACGGCCCTCAGCTGCATCTACCTaGGTAGGCTGTAGCAAGGGCTGCCCACCCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RACGRRPSAAST*VGCSKGCPPPG Trigger: TCCTGGGGGTGGGCAGCCCTTGCTACAGCCTACCAAGGTAGATGCAGCTGAGGGCCGTCGGCCACAGGCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | TGGTCCAGCTCACTAAGCACCCGCCGCACGGCTGCATACTGCACGTaGGCCTCAGTCAGGGCACGGAGGACATTGTCCTGGGCGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: WSSSLSTRRTAAYCT*ASVRARRTLSWAAR Trigger: CCTGGCCGCCCAGGACAATGTCCTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGAGCTGGACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | CGCCCTCACCTCGAGGAACCGCCCTCACCTTCTGGCTaGTGTTCACACTGGCCACAGGCTTGCCAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPHLEEPPSPSG*CSHWPQACQEE Trigger: CTCCTCCTGGCAAGCCTGTGGCCAGTGTGAACATCAGCCAGAAGGTGAGGGCGGTTCCTCGAGGTGAGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200531.2 |
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| CDS CCA 72 bp | TGCCTCCCCCTCCTCACGGCGGGACAGCAATGGCTTTaGGGCTGTAGGCCGAGGTGGTGGTGCCTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CLPLLTAGQQWL*GCRPRWWCLLL Trigger: AAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGCCGTGAGGAGGGGGAGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | CAGCCGCCCTCACCTCGAGGAACCGCCCTCACCTTCTaGCTGATGTTCACACTGGCCACAGGCTTGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPPSPRGTALTF*LMFTLATGLPG Trigger: TCCTGGCAAGCCTGTGGCCAGTGTGAACATCAGCCAGAAGGTGAGGGCGGTTCCTCGAGGTGAGGGCGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200531.2 |
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| CDS CAA 90 bp | CTGAGGGGGTCATCCGTAGGCTGGGCAGCCCTTAGACCCTGCCCGTaGTGGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTGCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRGSSVGWAALRPCP*WACRKFCLLIRCFP Trigger: GGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GGAACCGCCCTCACCTTCTGGCTGATGTTCACACTGGCCACAGGCTaGCCAGGAGGAGGCACACCATGGCGCTGTAGGACCTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GTALTFWLMFTLATG*PGGGTPWRCRTCST Trigger: TGTGGAGCAGGTCCTACAGCGCCATGGTGTGCCTCCTCCTGGCAAGCCTGTGGCCAGTGTGAACATCAGCCAGAAGGTGAGGGCGGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200531.2 |
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| CDS GCA 72 bp | TCCAGCTCACTAAGCACCCGCCGCACGGCTGCATACTaGACGTTGGCCTCAGTCAGGGCACGGAGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLSTRRTAAY*TLASVRARRTL Trigger: CAATGTCCTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGAGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CTTTTGGTCCAGCTCACTAAGCACCCGCCGCACGGCTaGATACTGCACGTTGGCCTCAGTCAGGGCACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLVQLTKHPPHG*ILHVGLSQGTE Trigger: CTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGAGCTGGACCAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CTGGCTCTCAGGGCTAGAAGACAGAAGGTCTGCAGCTaGAGCACCTCGGCGCAAACAAGGTGGTGGCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LALRARRQKVCS*STSAQTRWWLG Trigger: GCCGAGCCACCACCTTGTTTGCGCCGAGGTGCTGCAGCTGCAGACCTTCTGTCTTCTAGCCCTGAGAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TCAGCTGCATCTACCTTGGTAGGCTGTAGCAAGGGCTaGCCACCCCCAGGAGGCTGGGTACCTCCATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SAASTLVGCSKG*PPPGGWVPPCW Trigger: CCAGCATGGAGGTACCCAGCCTCCTGGGGGTGGGCAGCCCTTGCTACAGCCTACCAAGGTAGATGCAGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CTCTTGCAACTCTCTCCAGATGGCATCCAGTGCTCCTaGATCCCCCAGCTGGCCCCGAAAGGCCTCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLQLSPDGIQCS*IPQLAPKGLQL Trigger: GAGCTGGAGGCCTTTCGGGGCCAGCTGGGGGATGCAGGAGCACTGGATGCCATCTGGAGAGAGTTGCAAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | AGGGGGTCATCCGTAGGCTGGGCAGCCCTTAGACCCTaGCCGTTGTGGGCCTGCAGAAAGTTCTGCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGSSVGWAALRP*PLWACRKFCLL Trigger: GAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGACCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | AGCTCTCTGTCCAGGAGCTGCTGGCGAGCGGCCTCTTaGGCACGACAGATGGATTGTGCCCGTTCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSLSRSCWRAAS*ARQMDCARSRR Trigger: CCTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GGGTACGAGGCCCAACTCCGATGTATAGGCAGGGGCTaGGTAGAGGACCGTTGCAGGTGCCATGGGAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GYEAQLRCIGRG*VEDRCRCHGNC Trigger: GCAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACATCGGAGTTGGGCCTCGTACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TGGATGCTGGAATGGAAGGGGCTGTTGTGTGGGTTGTaGCCCAAATGCTGGCCGTTGGGGCTGAGGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WMLEWKGLLCGL*PKCWPLGLRLG Trigger: CCCCAGCCTCAGCCCCAACGGCCAGCATTTGGGCCACAACCCACACAACAGCCCCTTCCATTCCAGCATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS CCA 72 bp | ATGTGTTTCCTCTGCTGCCGCATCCGCCTCACCAGCTaGGGCAGCTCTGGAATCCCATTCCCAGCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: MCFLCCRIRLTS*GSSGIPFPAST Trigger: GGTGGAGGCTGGGAATGGGATTCCAGAGCTGCCCCAGCTGGTGAGGCGGATGCGGCAGCAGAGGAAACACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS CCA 72 bp | TCCGTAGGCTGGGCAGCCCTTAGACCCTGCCCGTTGTaGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVGWAALRPCPL*ACRKFCLLIRC Trigger: GCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | TCACTAAGCACCCGCCGCACGGCTGCATACTGCACGTaGGCCTCAGTCAGGGCACGGAGGACATTGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTRRTAAYCT*ASVRARRTLSW Trigger: CCAGGACAATGTCCTCCGTGCCCTGACTGAGGCCAACGTGCAGTATGCAGCCGTGCGGCGGGTGCTTAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | CAGCTCTCTGTCCAGGAGCTGCTGGCGAGCGGCCTCTaGGGCACGACAGATGGATTGTGCCCGTTCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSVQELLASGL*GTTDGLCPFQK Trigger: CTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | GGTAGGCAAAGGCGCCTGCTGCACACTGGAAGTGGGTaGAGGAGACTTTCATGCCCTCCTCAGACACCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRQRRLLHTGSG*RRLSCPPQTPA Trigger: AGCGGGTGTCTGAGGAGGGCATGAAAGTCTCCTGCACCCACTTCCAGTGTGCAGCAGGCGCCTTTGCCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CCAGCCCCGGCCTGGCCCAGGGTCTCCTGCAATTTCTaGTCTTGCAGCTCATCTTCCTCCAGTAGATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPAWPRVSCNF*SCSSSSSSRSL Trigger: CAGGGATCTACTGGAGGAAGATGAGCTGCAAGAGCAGAAATTGCAGGAGACCCTGGGCCAGGCCGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS CCA 72 bp | GCGGGACAGCAATGGCTTTGGGGCTGTAGGCCGAGGTaGTGGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGQQWLWGCRPR*WCLLLQLSVQE Trigger: CTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | CCTGGTGCCGGTTCTTCAGGGAGTAGCAGCGGGCAATaGCAATGGATCGACCTCGGGCATCGTGTTCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGAGSSGSSSGQ*QWIDLGHRVPV Trigger: CACAGGAACACGATGCCCGAGGTCGATCCATTGCCATTGCCCGCTGCTACTCCCTGAAGAACCGGCACCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | GTGCAGGAGACTTTCATGCCCTCCTCAGACACCCGCTaGTCCATAGCCCCCAGCATGGAGTGCAGTGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: VQETFMPSSDTR*SIAPSMECSAP Trigger: CGGTGCACTGCACTCCATGCTGGGGGCTATGGACAAGCGGGTGTCTGAGGAGGGCATGAAAGTCTCCTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | TCATCCGTAGGCTGGGCAGCCCTTAGACCCTGCCCGTaGTGGGCCTGCAGAAAGTTCTGCTTGCTCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVGWAALRPCP*WACRKFCLLIR Trigger: GCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGCCCAGCCTACGGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GTCCAGGAGCTGCTGGCGAGCGGCCTCTTGGGCACGACAGATGGATaGTGCCCGTTCCAGAAGGGTAGCTACCTTGCTTTCCAAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VQELLASGLLGTTDG*CPFQKGSYLAFQVC Trigger: GCAGACTTGGAAAGCAAGGTAGCTACCCTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GGCCTGAGATGGGAAGAGATGTGGATGCTGGAATGGAAGGGGCTGTaGTGTGGGTTGTGGCCCAAATGCTGGCCGTTGGGGCTGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLRWEEMWMLEWKGL*CGLWPKCWPLGLRL Trigger: CAGCCTCAGCCCCAACGGCCAGCATTTGGGCCACAACCCACACAACAGCCCCTTCCATTCCAGCATCCACATCTCTTCCCATCTCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | GGGACTGGAAAGCCTGTGGGGATCCCAGGAGGAAACTaGTGCTGTGGTAGAGGGCCAGTGAGGTGCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GTGKPVGIPGGN*CCGRGPVRCCL Trigger: CAAGCAGCACCTCACTGGCCCTCTACCACAGCATCAGTTTCCTCCTGGGATCCCCACAGGCTTTCCAGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | CTGAGCGCAGCACCACACGGTTGCTGTCATACGGCATaGCATCCTGGTGCCGGTTCTTCAGGGAGTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSAAPHGCCHTA*HPGAGSSGSSS Trigger: GCTGCTACTCCCTGAAGAACCGGCACCAGGATGTCATGCCGTATGACAGCAACCGTGTGGTGCTGCGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TGTATAGGCAGGGGCTGGGTAGAGGACCGTTGCAGGTaGCATGGGAACTGCAGCCCTAGGCTGCATCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CIGRGWVEDRCR*HGNCSPRLHQL Trigger: CAACTGATGCAGCCTAGGGCTGCAGTTCCCATGGCACCTGCAACGGTCCTCTACCCAGCCCCTGCCTATACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TCCATGCTGGCTCTCAGGGCTAGAAGACAGAAGGTCTaGAGCTGCAGCACCTCGGCGCAAACAAGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMLALRARRQKV*SCSTSAQTRWW Trigger: CCACCACCTTGTTTGCGCCGAGGTGCTGCAGCTGCAGACCTTCTGTCTTCTAGCCCTGAGAGCCAGCATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CTCCACATGGGTCTCAGTAGTACGAATACTGCTCAGTaGCACGCTCAGGGCTCCATGCACCATGGGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHMGLSSTNTAQ*HAQGSMHHGLA Trigger: GGCCAGCCCATGGTGCATGGAGCCCTGAGCGTGGCACTGAGCAGTATTCGTACTACTGAGACCCATGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TTGCCAGGAGGAGGCACACCATGGCGCTGTAGGACCTaGTCCACATGTCTCACCAACGCCTCATGGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPGGGTPWRCRT*STCLTNASWQN Trigger: GTTCTGCCATGAGGCGTTGGTGAGACATGTGGAGCAGGTCCTACAGCGCCATGGTGTGCCTCCTCCTGGCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS CCA 72 bp | CCAAGGACACACGCTGGTCCCGCATCTCCTGCACCTTaGCGAGGATGCGCTTTAGGTTTTGCAGCACGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PRTHAGPASPAP*RGCALGFAARL Trigger: AAGCCGTGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GGACAGCAATGGCTTTGGGGCTGTAGGCCGAGGTGGTaGTGCCTTCTTCTTCAGCTCTCTGTCCAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQQWLWGCRPRW*CLLLQLSVQEL Trigger: CAGCTCCTGGACAGAGAGCTGAAGAAGAAGGCACCACCACCTCGGCCTACAGCCCCAAAGCCATTGCTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GCCGGTTCTTCAGGGAGTAGCAGCGGGCAATGGCAATaGATCGACCTCGGGCATCGTGTTCCTGTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGSSGSSSGQWQ*IDLGHRVPVPL Trigger: AAGAGGCACAGGAACACGATGCCCGAGGTCGATCCATTGCCATTGCCCGCTGCTACTCCCTGAAGAACCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | AGATGGGACAGGGGTAGACTCTGGAAGGCTAGCTGGTaGAAGACCTGGGGGTTCTACAAGGCCTGGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RWDRGRLWKASW*KTWGFYKAWEA Trigger: AGCCTCCCAGGCCTTGTAGAACCCCCAGGTCTTCCACCAGCTAGCCTTCCAGAGTCTACCCCTGTCCCATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS CAA 72 bp | ACCCCTGACAGCACCTGCATAGACTGGACAAGGTTCTaGACAGTGTCAGGCCGGACGCTGAGTGCCGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: TPDSTCIDWTRF*TVSGRTLSAAH Trigger: GTGTGCGGCACTCAGCGTCCGGCCTGACACTGTCAAGAACCTTGTCCAGTCTATGCAGGTGCTGTCAGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | TCCAAGGACACACGCTGGTCCCGCATCTCCTGCACCTaGGCGAGGATGCGCTTTAGGTTTTGCAGCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SKDTRWSRISCT*ARMRFRFCSTA Trigger: AGCCGTGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | CTTCTTCTTCAGCTCTCTGTCCAGGAGCTGCTGGCGAGCGGCCTCTaGGGCACGACAGATGGATTGTGCCCGTTCCAGAAGGGTAGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLQLSVQELLASGL*GTTDGLCPFQKGSY Trigger: GTAGCTACCCTTCTGGAACGGGCACAATCCATCTGTCGTGCCCAAGAGGCCGCTCGCCAGCAGCTCCTGGACAGAGAGCTGAAGAAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | AGGGGTAGGGTTTGGCCGTGGTGCCGTGTGGCTAGAGATAGGGGCTaGGACACTATCTACTGTGGTGGTAGCTGGCCGAACTGTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGRVWPWCRVARDRG*DTIYCGGSWPNCHG Trigger: GCCATGACAGTTCGGCCAGCTACCACCACAGTAGATAGTGTCCAAGCCCCTATCTCTAGCCACACGGCACCACGGCCAAACCCTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GGCAATGGCAATGGATCGACCTCGGGCATCGTGTTCCTGTGCCTCTaGCAACTCTCTCCAGATGGCATCCAGTGCTCCTGCATCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GNGNGSTSGIVFLCL*QLSPDGIQCSCIPQ Trigger: CTGGGGGATGCAGGAGCACTGGATGCCATCTGGAGAGAGTTGCAAGAGGCACAGGAACACGATGCCCGAGGTCGATCCATTGCCATTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | TCCGTGAACACCCCTGACAGCACCTGCATAGACTGGACAAGGTTCTaGACAGTGTCAGGCCGGACGCTGAGTGCCGCACACTTCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVNTPDSTCIDWTRF*TVSGRTLSAAHFSM Trigger: CATGGAGAAGTGTGCGGCACTCAGCGTCCGGCCTGACACTGTCAAGAACCTTGTCCAGTCTATGCAGGTGCTGTCAGGGGTGTTCACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | AGCTGCTGTTCCAAGGACACACGCTGGTCCCGCATCTCCTGCACCTaGGCGAGGATGCGCTTTAGGTTTTGCAGCACGGCTTTGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCCSKDTRWSRISCT*ARMRFRFCSTALSS Trigger: AGAGGACAAAGCCGTGCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | GGGAAATGGAGGTGCACAAGAGAGCGCTTGAGGCTCTaGTCCCGGAACTGCAGACTCAGCACTCGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GKWRCTRERLRL*SRNCRLSTRST Trigger: TGTGGAGCGAGTGCTGAGTCTGCAGTTCCGGGATCAGAGCCTCAAGCGCTCTCTTGTGCACCTCCATTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | GATCCTGGGAGTCCTGAGGAAGGTGGTTCTTCTGGCTaGTGTTCACACTGGCCACAGGCTTGCCAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DPGSPEEGGSSG*CSHWPQACQEE Trigger: CTCCTCCTGGCAAGCCTGTGGCCAGTGTGAACATCAGCCAGAAGAACCACCTTCCTCAGGACTCCCAGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CCGGCCTGGCCCAGGGTCTCCTGCAATTTCTGCTCTTaGAGCTCATCTTCCTCCAGTAGATCCCTGATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAWPRVSCNFCS*SSSSSSRSLMS Trigger: GGACATCAGGGATCTACTGGAGGAAGATGAGCTGCAAGAGCAGAAATTGCAGGAGACCCTGGGCCAGGCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 72 bp | TGCTGTTCCAAGGACACACGCTGGTCCCGCATCTCCTaGACCTTGGCGAGGATGCGCTTTAGGTTTTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSKDTRWSRIS*TLARMRFRFCS Trigger: GCTGCAAAACCTAAAGCGCATCCTCGCCAAGGTGCAGGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 72 bp | GCAGTGATGTCATCCTTCTGGATCAGCTCTCGGAGCTaGTGTTCCAAGGACACACGCTGGTCCCGCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVMSSFWISSRS*CSKDTRWSRIS Trigger: GGAGATGCGGGACCAGCGTGTGTCCTTGGAACAGCAGCTCCGAGAGCTGATCCAGAAGGATGACATCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS CAA 72 bp | GTTTGGCCGTGGTGCCGTGTGGCTAGAGATAGGGGCTaGGACACTATCTACTGTGGTGGTAGCTGGCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VWPWCRVARDRG*DTIYCGGSWPN Trigger: GTTCGGCCAGCTACCACCACAGTAGATAGTGTCCAAGCCCCTATCTCTAGCCACACGGCACCACGGCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS CAA 72 bp | TGGGAAGAGATGTGGATGCTGGAATGGAAGGGGCTGTaGTGTGGGTTGTGGCCCAAATGCTGGCCGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WEEMWMLEWKGL*CGLWPKCWPLG Trigger: CCCCAACGGCCAGCATTTGGGCCACAACCCACACAACAGCCCCTTCCATTCCAGCATCCACATCTCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS TCA 72 bp | GTCCTTCAGGGAGGCCTCCACATCCGTGAACACCCCTaGCAGCACCTGCATAGACTGGACAAGGTTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLQGGLHIREHP*QHLHRLDKVLD Trigger: GTCAAGAACCTTGTCCAGTCTATGCAGGTGCTGTCAGGGGTGTTCACGGATGTGGAGGCCTCCCTGAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
||
| CDS GCA 72 bp | CTGTGGGAAGTGTTCACGCAGGTAGGCAAAGGCGCCTaGTGCACACTGGAAGTGGGTGCAGGAGACTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LWEVFTQVGKGA*CTLEVGAGDFH Trigger: ATGAAAGTCTCCTGCACCCACTTCCAGTGTGCAGCAGGCGCCTTTGCCTACCTGCGTGAACACTTCCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CCCCCGATGACATCCATAGCAAAGCGAAGTGCATCTTaGACAGTGTCGGGCTGGCCCTTGGCCAACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: PPMTSIAKRSAS*TVSGWPLANLM Trigger: CATCAAGTTGGCCAAGGGCCAGCCCGACACTGTGCAAGATGCACTTCGCTTTGCTATGGATGTCATCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | GAGGCCTCCACATCCGTGAACACCCCTGACAGCACCTaGATAGACTGGACAAGGTTCTTGACAGTGTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EASTSVNTPDST*IDWTRFLTVSG Trigger: GCCTGACACTGTCAAGAACCTTGTCCAGTCTATGCAGGTGCTGTCAGGGGTGTTCACGGATGTGGAGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | GACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTGCTTaGTCATCCGCTGCTTTCCCCGTAAAGAACTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DPARCGPAESSA*SSAAFPVKNCP Trigger: TGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS CCA 72 bp | GTCAGGACCTGTAACAGCTGGGTCTGTGGGGTTTACTaGCAAGGGCTTCACCAAGGGAGCTCCTTTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: VRTCNSWVCGVY*QGLHQGSSFHR Trigger: CCTGTGAAAGGAGCTCCCTTGGTGAAGCCCTTGCCAGTAAACCCCACAGACCCAGCTGTTACAGGTCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | AGGGACTGCTTACAATTCCATGCTGGGGAGAGGATCTaGGTACGAGGCCCAACTCCGATGTATAGGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RDCLQFHAGERI*VRGPTPMYRQG Trigger: CCCCTGCCTATACATCGGAGTTGGGCCTCGTACCCAGATCCTCTCCCCAGCATGGAATTGTAAGCAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TTTGGCCGTGGTGCCGTGTGGCTAGAGATAGGGGCTTaGACACTATCTACTGTGGTGGTAGCTGGCCGAACT | + |
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Preference number: 6 (lower is better) Translates to: FGRGAVWLEIGA*TLSTVVVAGRT Trigger: AGTTCGGCCAGCTACCACCACAGTAGATAGTGTCCAAGCCCCTATCTCTAGCCACACGGCACCACGGCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GACACCAGGCTGAGGAGTAAAATGGTAGGGTGTTGGTaGTGGTGGTGGAAGAATCCCTGGGGCCTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: DTRLRSKMVGCW*WWWKNPWGLRW Trigger: CCATCTCAGGCCCCAGGGATTCTTCCACCACCACCACCAACACCCTACCATTTTACTCCTCAGCCTGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | GCCCCCGATGACATCCATAGCAAAGCGAAGTGCATCTaGCACAGTGTCGGGCTGGCCCTTGGCCAACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: APDDIHSKAKCI*HSVGLALGQLD Trigger: ATCAAGTTGGCCAAGGGCCAGCCCGACACTGTGCAAGATGCACTTCGCTTTGCTATGGATGTCATCGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | AGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTGCTaGCTCATCCGCTGCTTTCCCCGTAAAGAACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RPCPLWACRKFC*LIRCFPRKELS Trigger: GGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CTTAGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTaGTTGCTCATCCGCTGCTTTCCCCGTAAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: LRPCPLWACRKF*LLIRCFPRKEL Trigger: CAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TGGCCCAGCATGAGGTTGACATTGAGCGTAAGGATCTaGCGACTCATGTCCACACTGAAGGCCTGTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: WPSMRLTLSVRI*RLMSTLKACGK Trigger: CTTCCCACAGGCCTTCAGTGTGGACATGAGTCGCCAGATCCTTACGCTCAATGTCAACCTCATGCTGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 72 bp | AGTGATGAGGCCTCATGGGCAGCCATGGGCACCAACTaGGCAAAGATGTCAGGACCTGTAACAGCTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SDEASWAAMGTN*AKMSGPVTAGS Trigger: AGACCCAGCTGTTACAGGTCCTGACATCTTTGCCAAGTTGGTGCCCATGGCTGCCCATGAGGCCTCATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | TCACTGTACAGTGATGAGGCCTCATGGGCAGCCATGGGCACCAACTaGGCAAAGATGTCAGGACCTGTAACAGCTGGGTCTGTGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLYSDEASWAAMGTN*AKMSGPVTAGSVGF Trigger: AAACCCCACAGACCCAGCTGTTACAGGTCCTGACATCTTTGCCAAGTTGGTGCCCATGGCTGCCCATGAGGCCTCATCACTGTACAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | AGAATAAGTATAGGGTACAGGCAGAGGCTGTGGTTGGGGAACAGATaGAGGTACAGGCTGAGGCACTGGAAAGCAGGGCTGGGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RISIGYRQRLWLGNR*RYRLRHWKAGLGKS Trigger: GCTCTTCCCCAGCCCTGCTTTCCAGTGCCTCAGCCTGTACCTCAATCTGTTCCCCAACCACAGCCTCTGCCTGTACCCTATACTTATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GCAGCCCTTAGACCCTGCCCGTTGTGGGCCTGCAGAAAGTTCTGCTaGCTCATCCGCTGCTTTCCCCGTAAAGAACTGTCCAGTGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: AALRPCPLWACRKFC*LIRCFPRKELSSEN Trigger: ATTTTCACTGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAACGGGCAGGGTCTAAGGGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CAGGGAGGCAGTATCAGGGTTTTCCAAGGCCCGGCATaGCTCCTTATAGTAATCTACCACCTGTGCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: QGGSIRVFQGPA*LLIVIYHLCAD Trigger: ATCAGCGCACAGGTGGTAGATTACTATAAGGAGGCATGCCGGGCCTTGGAAAACCCTGATACTGCCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | ATATTTGCCCCCGATGACATCCATAGCAAAGCGAAGTaGATCTTGCACAGTGTCGGGCTGGCCCTTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: IFAPDDIHSKAK*ILHSVGLALGQ Trigger: TTGGCCAAGGGCCAGCCCGACACTGTGCAAGATGCACTTCGCTTTGCTATGGATGTCATCGGGGGCAAATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TCCAGTGGTCCACTGAGCAGGCGCAAGTTACCAACATaGAGGTTCATAGCACGATGCAGCTCACTGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSGPLSRRKLPT*RFIARCSSLLV Trigger: CACCAACAGTGAGCTGCATCGTGCTATGAACCTGCATGTTGGTAACTTGCGCCTGCTCAGTGGACCACTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TTGGCCTTCTCCTCACTGTACAGTGATGAGGCCTCATaGGCAGCCATGGGCACCAACTTGGCAAAGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: LAFSSLYSDEAS*AAMGTNLAKMS Trigger: TGACATCTTTGCCAAGTTGGTGCCCATGGCTGCCCATGAGGCCTCATCACTGTACAGTGAGGAGAAGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TCAGTGGTGACCAGAGAGGCAGTGATGTCATCCTTCTaGATCAGCTCTCGGAGCTGCTGTTCCAAGGACACA | + |
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Preference number: 6 (lower is better) Translates to: SVVTREAVMSSF*ISSRSCCSKDT Trigger: TGTGTCCTTGGAACAGCAGCTCCGAGAGCTGATCCAGAAGGATGACATCACTGCCTCTCTGGTCACCACTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | TTCTTCAGGACAAACTTCTTCACCGCAGACTGGAAGTaGAAGTCACCGGCCTCCTTCAGGTCCAGCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: FFRTNFFTADWK*KSPASFRSSQI Trigger: GATCTGGCTGGACCTGAAGGAGGCCGGTGACTTTCACTTCCAGTCTGCGGTGAAGAAGTTTGTCCTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CGATGCAGCTCACTGTTGGTGAAGGAAGCCTTTTCATaGACTTCCATGTACTTGGCCCATTCTCGCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: RCSSLLVKEAFS*TSMYLAHSRLT Trigger: GGTGAGGCGAGAATGGGCCAAGTACATGGAAGTGCATGAAAAGGCTTCCTTCACCAACAGTGAGCTGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | CACCGAGGTTGTAGAGAATACAGGCCTGCTCGTACTTaGTGTCTTCATGGGACACAGACTTGCCCGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HRGCREYRPART*CLHGTQTCPRR Trigger: TCTTCTCGGGCAAGTCTGTGTCCCATGAAGACATCAAGTACGAGCAGGCCTGTATTCTCTACAACCTCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | GGGAGCTCCTTTCACAGGCTGGAGTGTATCCAGTGCTaGCACAGCCTCATGGTAGATAAAGTCATTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GSSFHRLECIQC*HSLMVDKVIVL Trigger: AAGGACAATGACTTTATCTACCATGAGGCTGTGCCAGCACTGGATACACTCCAGCCTGTGAAAGGAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | CCCTATAGAATAAGTATAGGGTACAGGCAGAGGCTGTaGTTGGGGAACAGATTGAGGTACAGGCTGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PYRISIGYRQRL*LGNRLRYRLRH Trigger: GTGCCTCAGCCTGTACCTCAATCTGTTCCCCAACCACAGCCTCTGCCTGTACCCTATACTTATTCTATAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | GCTCCACATGTCTCACCAACGCCTCATGGCAGAACTTaGGGTGAAGTTTTTCCTGCAGCATGTGTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: APHVSPTPHGRT*GEVFPAACVSS Trigger: AGAGGAAACACATGCTGCAGGAAAAACTTCACCTCAAGTTCTGCCATGAGGCGTTGGTGAGACATGTGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS GCA 72 bp | AGGCGCAAGTTACCAACATGCAGGTTCATAGCACGATaGAGCTCACTGTTGGTGAAGGAAGCCTTTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: RRKLPTCRFIAR*SSLLVKEAFSC Trigger: GCATGAAAAGGCTTCCTTCACCAACAGTGAGCTGCATCGTGCTATGAACCTGCATGTTGGTAACTTGCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | GAGGTGCTGCTTGGTCCCTATAGAGTAAGTATAGGGTaGAGGCAGAGGCTGCTTGGTCCCTATAGAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: EVLLGPYRVSIG*RQRLLGPYRIS Trigger: ACTTATTCTATAGGGACCAAGCAGCCTCTGCCTGCACCCTATACTTACTCTATAGGGACCAAGCAGCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | TTGTGGGCCTGCAGAAAGTTCTGCTTGCTCATCCGCTaGTTTCCCCGTAAAGAACTGTCCAGTGAAAATGCT | + |
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Preference number: 6 (lower is better) Translates to: LWACRKFCLLIR*FPRKELSSENA Trigger: AGCATTTTCACTGGACAGTTCTTTACGGGGAAAGCAGCGGATGAGCAAGCAGAACTTTCTGCAGGCCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040021.12 ENSMUST00000200531.2 |
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| CDS TCA 72 bp | CTCCACACAGCTAGCATTAATATAATCATCTTTGCCTaGGCGCAGCACCACACGGTTGCTGTCATACGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LHTASINIIIFA*AQHHTVAVIRH Trigger: ATGCCGTATGACAGCAACCGTGTGGTGCTGCGCTCAGGCAAAGATGATTATATTAATGCTAGCTGTGTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CCA 72 bp | TATCTTCAATTTTGGCCAGCATCTCCCGAAGCAGTTTaGCCTTCTCCTCACTGTACAGTGATGAGGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: YLQFWPASPEAV*PSPHCTVMRPH Trigger: ATGAGGCCTCATCACTGTACAGTGAGGAGAAGGCCAAACTGCTTCGGGAGATGCTGGCCAAAATTGAAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS CAA 90 bp | GGTAGCTACCTTGCTTTCCAAGTCTGCATAAAAGTCCTTGCCTTCTaGGGACTTCTTCATCAGGTCCTCATAGGCCTCATAGGATGCTAC | + |
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Preference number: 6 (lower is better) Translates to: GSYLAFQVCIKVLAF*GLLHQVLIGLIGCY Trigger: GTAGCATCCTATGAGGCCTATGAGGACCTGATGAAGAAGTCCCAAGAAGGCAAGGACTTTTATGCAGACTTGGAAAGCAAGGTAGCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS TCA 72 bp | ACTGTCTCAGGGTCCAGCTGCATGGAGTCCATGAACTaGTCTAGGACCTCATTCTTATCTTCAATTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TVSGSSCMESMN*SRTSFLSSILA Trigger: GGCCAAAATTGAAGATAAGAATGAGGTCCTAGATCAGTTCATGGACTCCATGCAGCTGGACCCTGAGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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| CDS GCA 72 bp | CCGTTCCAGAAGGGTAGCTACCTTGCTTTCCAAGTCTaGATAAAAGTCCTTGCCTTCTTGGGACTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PFQKGSYLAFQV*IKVLAFLGLLH Trigger: ATGAAGAAGTCCCAAGAAGGCAAGGACTTTTATGCAGACTTGGAAAGCAAGGTAGCTACCCTTCTGGAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040021.12 |
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