Pregenerated sensors for PTPN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026604Ensembl transcript IDs: ENSMUST00000027898.7, ENSMUST00000097442.9
Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCTGTCATCCCAGCCTGTCAGCATCCAGGGGCACCTCCCAGCTTaGCCAGATGCAAGGCCAGCACAGCGAGGTAGCAGGGTCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: HLSSQPVSIQGHLPA*PDARPAQRGSRVTK Trigger: CTTTGTGACCCTGCTACCTCGCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAGGCTGGGATGACAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | TGGGAAGCCCTGAGGTGCACCTGTCCCACAGCTGACCAGGGAGACTaGAGCGAACAGTCCAGCAAGCCAGAAGTAGGTAGACTGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: WEALRCTCPTADQGD*SEQSSKPEVGRLQV Trigger: GACCTGCAGTCTACCTACTTCTGGCTTGCTGGACTGTTCGCTTCAGTCTCCCTGGTCAGCTGTGGGACAGGTGCACCTCAGGGCTTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | AGCTTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTaGGAAGCCCTGAGGTGCACCTGTCCCACAGCTGACCAGGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: SLSCISYPSEQCGAP*EALRCTCPTADQGD Trigger: GTCTCCCTGGTCAGCTGTGGGACAGGTGCACCTCAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | AGCTGTGCAGACCGCCTGGCCCAGGGCCACCAGACTACAGTGTTGTaGGTATACAAGACAAAGCAGCAGATACCCAGCCTGCCACCCATC | + |
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Preference number: 1 (lower is better) Translates to: SCADRLAQGHQTTVL*VYKTKQQIPSLPPI Trigger: GATGGGTGGCAGGCTGGGTATCTGCTGCTTTGTCTTGTATACTCACAACACTGTAGTCTGGTGGCCCTGGGCCAGGCGGTCTGCACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | AGAGGGCAGGGTATGGCTTGCATAGAAGCTGGTGGCTGTGTCCCATaGGGACCATGTCCTGAAGCAGAGGTGGCTGAGAGAGCCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: RGQGMACIEAGGCVP*GPCPEAEVAERAQD Trigger: GTCTTGGGCTCTCTCAGCCACCTCTGCTTCAGGACATGGTCCTCATGGGACACAGCCACCAGCTTCTATGCAAGCCATACCCTGCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR GCA 90 bp | GTGGGTTATCTTCTCACAGTCAGAATCAGGCAGAGGGCTGAGCTGTaGAGACCGCCTGGCCCAGGGCCACCAGACTACAGTGTTGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: VGYLLTVRIRQRAEL*RPPGPGPPDYSVVS Trigger: ACTCACAACACTGTAGTCTGGTGGCCCTGGGCCAGGCGGTCTGCACAGCTCAGCCCTCTGCCTGATTCTGACTGTGAGAAGATAACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | CCTGAAGCAGAGGTGGCTGAGAGAGCCCAAGACTGGAGTGGGTGTTaGGGGGAACGGGATGACGGCTTGCTTCTAATCGTGAGTAATCCC | + |
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Preference number: 1 (lower is better) Translates to: PEAEVAERAQDWSGC*GERDDGLLLIVSNP Trigger: GGGATTACTCACGATTAGAAGCAAGCCGTCATCCCGTTCCCCCCAACACCCACTCCAGTCTTGGGCTCTCTCAGCCACCTCTGCTTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | TTAGCCAACACTGCACTGAAGGAGGCTGGAGCCCCAAAGAAATGCTaGGAACGCCAAGCACGAGCCACCTGGCTACACTCGGCATTCCTG | + |
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Preference number: 1 (lower is better) Translates to: LANTALKEAGAPKKC*ERQARATWLHSAFL Trigger: CAGGAATGCCGAGTGTAGCCAGGTGGCTCGTGCTTGGCGTTCTCAGCATTTCTTTGGGGCTCCAGCCTCCTTCAGTGCAGTGTTGGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | CCCACAAAAGCCAACCACATCTGGCATAGCACTGCATTCCAGCCATaGTGGCTGAGGTCTGAGGGCTTCTGTGGGCTGACCCAAGAACCC | + |
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Preference number: 1 (lower is better) Translates to: PTKANHIWHSTAFQP*WLRSEGFCGLTQEP Trigger: GGGTTCTTGGGTCAGCCCACAGAAGCCCTCAGACCTCAGCCATCATGGCTGGAATGCAGTGCTATGCCAGATGTGGTTGGCTTTTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | GCAAGGTGCAGGAACCCAGTGTGTTTGGATCACTTTCCAGGACCTTaGCTCTCTCCCTTCCAGCTGAGGATGGTTTCTCTCTCTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: ARCRNPVCLDHFPGP*LSPFQLRMVSLSCH Trigger: GTGGCAAGAGAGAGAAACCATCCTCAGCTGGAAGGGAGAGAGCCAAGGTCCTGGAAAGTGATCCAAACACACTGGGTTCCTGCACCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | TCAACATCAGCACCAGCACCACCCCTGCCCAGTGTGAAGACAGCTTaGCTCACCTTCCAGAGGAGTTCATGGGGATTCTGCTGTCATAAG | + |
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Preference number: 1 (lower is better) Translates to: STSAPAPPLPSVKTA*LTFQRSSWGFCCHK Trigger: CTTATGACAGCAGAATCCCCATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTGGTGCTGGTGCTGATGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | CAGGAGGGAGGCCTGGTTGTGAGAAGCCTTCTACACGATTCATCTTaGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: QEGGLVVRSLLHDSS*TLISQIPSPIPRSY Trigger: GTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAATCGTGTAGAAGGCTTCTCACAACCAGGCCTCCCTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | CAAATGCTGTATCAACATCAGCACCAGCACCACCCCTGCCCAGTGTaGAGACAGCTTGGCTCACCTTCCAGAGGAGTTCATGGGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: QMLYQHQHQHHPCPV*RQLGSPSRGVHGDS Trigger: AGAATCCCCATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTGGTGCTGGTGCTGATGTTGATACAGCATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | TCTGCATGGCGGAAGGGAGGATGGAAGCACCTCTTCTACAGATTCTaGACCCACAAATGCTGTATCAACATCAGCACCAGCACCACCCCT | + |
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Preference number: 1 (lower is better) Translates to: SAWRKGGWKHLFYRF*THKCCINISTSTTP Trigger: AGGGGTGGTGCTGGTGCTGATGTTGATACAGCATTTGTGGGTTCAGAATCTGTAGAAGAGGTGCTTCCATCCTCCCTTCCGCCATGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | AGCGAGGTAGCAGGGTCACAAAGAACCAGTTCAGGAGGTAGCTGCTaGAAAGTGGAAGCTGAGAGAGGGCAGGGTATGGCTTGCATAGAA | + |
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Preference number: 1 (lower is better) Translates to: SEVAGSQRTSSGGSC*KVEAERGQGMACIE Trigger: TTCTATGCAAGCCATACCCTGCCCTCTCTCAGCTTCCACTTTTCAGCAGCTACCTCCTGAACTGGTTCTTTGTGACCCTGCTACCTCGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | GATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACAGGCTaGGTGCCGAGTCCCAACCTGGAATGCTTTATATTTTCTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: DLTAISAEDRAAATG*VPSPNLECFIFSYL Trigger: TAAATAAGAAAATATAAAGCATTCCAGGTTGGGACTCGGCACCCAGCCTGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR GCA 90 bp | AGGACAGTTTTCAGTTCAATGCTGAAGGTATTTATTAGCCAACACTaGACTGAAGGAGGCTGGAGCCCCAAAGAAATGCTGAGAACGCCA | + |
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Preference number: 1 (lower is better) Translates to: RTVFSSMLKVFISQH*TEGGWSPKEMLRTP Trigger: TGGCGTTCTCAGCATTTCTTTGGGGCTCCAGCCTCCTTCAGTGCAGTGTTGGCTAATAAATACCTTCAGCATTGAACTGAAAACTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | TGGACAGGTAGGGTAAAATTAAAAATGAACTTCAGAGAGCTGGTCTaGAAAGCAAGTGAGCAAGGAAGGAAAGCTGGAGGCACTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: WTGRVKLKMNFRELV*KASEQGRKAGGTLG Trigger: ACCCAGAGTGCCTCCAGCTTTCCTTCCTTGCTCACTTGCTTTCCAGACCAGCTCTCTGAAGTTCATTTTTAATTTTACCCTACCTGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | AAACAGGGGTCAAGGCTAATCATGTTCGTTGAGTTTATTCTAGAATaGCCTGGTACTCTTCCCCTCTCCACCTCAAGTAACTGGCACATC | + |
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Preference number: 1 (lower is better) Translates to: KQGSRLIMFVEFILE*PGTLPLSTSSNWHI Trigger: GATGTGCCAGTTACTTGAGGTGGAGAGGGGAAGAGTACCAGGTCATTCTAGAATAAACTCAACGAACATGATTAGCCTTGACCCCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | TTAACCAGAGATCCACGGGGACTTCCTAGGGATGGGAAAGGAATTTaGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: LTRDPRGLPRDGKGI*NVTEEPEAMVSENG Trigger: TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTTCCCATCCCTAGGAAGTCCCCGTGGATCTCTGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR TCA 90 bp | GACCGCGCACTCCGTGGACAGCTCATTCCTAATACTGAGACAAAATaGATAAGTTATTACAAACAGGGGTCAAGGCTAATCATGTTCGTT | + |
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Preference number: 1 (lower is better) Translates to: DRALRGQLIPNTETK*ISYYKQGSRLIMFV Trigger: AACGAACATGATTAGCCTTGACCCCTGTTTGTAATAACTTATTCATTTTGTCTCAGTATTAGGAATGAGCTGTCCACGGAGTGCGCGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CCA 90 bp | GGGAGATCATCTCTAAGGAAGTGTGAGCTTGTATCTAAAAGAATCTaGTTACAGAATTTTAGGACTACCAATAGTGGCAAGGAACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: GRSSLRKCELVSKRI*LQNFRTTNSGKELQ Trigger: TTGAAGTTCCTTGCCACTATTGGTAGTCCTAAAATTCTGTAACCAGATTCTTTTAGATACAAGCTCACACTTCCTTAGAGATGATCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 90 bp | TCTGCCTGCTGCCAGCCATCCACCTCTGGCTGGGGGAGGCAGATGTaGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGCGTCCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SACCQPSTSGWGRQM*SKWRPLQDRAASLL Trigger: GAGGAGGGACGCAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAGAGGTGGATGGCTGGCAGCAGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCTGGCTTCTGCCTGCTaGCAGCCATCCACCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSLASAC*QPSTSG Trigger: GCCAGAGGTGGATGGCTGGCAGCAGGCAGAAGCCAG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCACCCCTGCCCAGTGTaGAGACAGCTTGGCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSHPCPV*RQLGSP Trigger: AGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCAGAGGGCTGAGCTGTaGAGACCGCCTGGCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSQRAEL*RPPGPG Trigger: CCCTGGGCCAGGCGGTCTGCACAGCTCAGCCCTCTG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCCGGAGAAAGATTGCTaGGGGCGAGGACAGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSPEKDC*GRGQRT Trigger: TGTCCTCTGTCCTCGCCCTCAGCAATCTTTCTCCGG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTACTCTGGCTTCTGCCTaGTGCCAGCCATCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSTLASA*CQPSTS Trigger: AGAGGTGGATGGCTGGCAGCAGGCAGAAGCCAGAGT...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCGAGGACAGAGCAGCTaGCACAGGCTGGGTGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSRGQSS*HRLGAE Trigger: CTCGGCACCCAGCCTGTGGCAGCTGCTCTGTCCTCG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACGCTGTGCAGACCGCCTaGCCCAGGGCCACCAGACTA | + |
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Preference number: 2 (lower is better) Translates to: QARESASAEHGSSTNGQNAVQTA*PRATRL Trigger: TAGTCTGGTGGCCCTGGGCCAGGCGGTCTGCACAGC...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCGGGCACCTCCCAGCTTaGCCAGATGCAAGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSGHLPA*PDARPA Trigger: TGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCC...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGACTGGAGTGGGTGTTaGGGGGAACGGGATGACGGC | + |
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Preference number: 2 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYDWSGC*GERDDG Trigger: GCCGTCATCCCGTTCCCCCCAACACCCACTCCAGTC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCGTCCTGAAGCAGAGGTaGCTGAGAGAGCCCAAGACT | + |
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Preference number: 2 (lower is better) Translates to: LSASRGTSQLDQMQGQHSVLKQR*LREPKT Trigger: AGTCTTGGGCTCTCTCAGCCACCTCTGCTTCAGGAC...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 90 bp | GCTGCCTGGCTAGAGCGCAGACAAGATGCAGCAGCGGCAGAATCTTaGGTAAATGCAGAAGTTGAGGGCCACACGGCAGTGACCGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: AAWLERRQDAAAAES*VNAEVEGHTAVTAH Trigger: GTGCGCGGTCACTGCCGTGTGGCCCTCAACTTCTGCATTTACCAAAGATTCTGCCGCTGCTGCATCTTGTCTGCGCTCTAGCCAGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCCAAGCAGCACACAGTaGGTTGGACACAGGTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LSASRGTSQLDQMQGQHSPSSTQ*VGHRCV Trigger: TACACACCTGTGTCCAACTCACTGTGTGCTGCTTGG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCACCTGTCCCACAGCTaGCCAGGGAGACTGAAGCGA | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSHLSHS*PGRLKR Trigger: TCGCTTCAGTCTCCCTGGTCAGCTGTGGGACAGGTG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCCCTGCACCTTGTTCTaGTACTTCCCTGCACCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSPCTLF*YFPAPC Trigger: ACAAGGTGCAGGGAAGTAGCAGAACAAGGTGCAGGG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR CCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCCATCCACCTCTGGCTaGGGGAGGCAGATGTTGTCG | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSPSTSG*GRQMLS Trigger: CGACAACATCTGCCTCCCCCAGCCAGAGGTGGATGG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 90 bp | TGTCCTTCCCCTGCCCTTAGGTGCAGTTTGCTAGGAGAGAGAGATTaGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CPSPALRCSLLGERD*TAISAEDRAAATGW Trigger: CCAGCCTGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAGCAAACTGCACCTAAGGGCAGGGGAAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACAGCCAGAACAAGGGGTaGGAGAAAGGACAGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYSQNKG*EKGQQR Trigger: GCGCTGCTGTCCTTTCTCTCACCCCTTGTTCTGGCT...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCGGTGGCTGTGTCCCATaGGGACCATGTCCTGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASGGCVP*GPCPEA Trigger: TGCTTCAGGACATGGTCCTCATGGGACACAGCCACC...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCATGATGGCTGAGGTCTaGGGGCTTCTGTGGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASMMAEV*GLLWAD Trigger: GTCAGCCCACAGAAGCCCTCAGACCTCAGCCATCAT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCACTGCATTCCAGCCATaGTGGCTGAGGTCTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASTAFQP*WLRSEG Trigger: GCCCTCAGACCTCAGCCATCATGGCTGGAATGCAGT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACACCAGCCATCCACCTCTaGCTGGGGGAGGCAGATGTT | + |
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Preference number: 2 (lower is better) Translates to: LGERDLTAISAEDRAAATPAIHL*LGEADV Trigger: AACATCTGCCTCCCCCAGCCAGAGGTGGATGGCTGG...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCAGATCCACAAGGCTTaGACACTTAGACTCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LSASRGTSQLDQMQGQHSQIHKA*TLRLLG Trigger: ACCAAGGAGTCTAAGTGTGCAAGCCTTGTGGATCTG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCTGAGAACAGGAGGATaGATGTGGACAAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSLRTGG*MWTSCW Trigger: CCAGCAGCTTGTCCACATTCATCCTCCTGTTCTCAG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCGGTCTGGAAAGCAAGTaGGCAAGGAAGGAAAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASGLESK*ARKESW Trigger: CCAGCTTTCCTTCCTTGCTCACTTGCTTTCCAGACC...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACCAGCACACAGTGAGTTaGACACAGGTGTGTACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYQHTVS*TQVCTS Trigger: GGAGGTACACACCTGTGTCCAACTCACTGTGTGCTG...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCACTGTATCAGACTTCTaGGCCAGAACAAGGGGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASTVSDF*ARTRGE Trigger: CTCACCCCTTGTTCTGGCTCAGAAGTCTGATACAGT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCATTACCAGTTTGCCTaGAACTTCACTAGAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSHYQFA*NFTRDA Trigger: AGCATCTCTAGTGAAGTTGCAGGCAAACTGGTAATG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCAGAGCGCAGACAAGATaGAGCAGCGGCAGAATCTTT | + |
|
Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASRAQTR*SSGRIF Trigger: AAAGATTCTGCCGCTGCTGCATCTTGTCTGCGCTCT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCGTCTTCCTGGGGCGTTaGGTCACAGTTTCCAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASVFLGR*VTVSNS Trigger: AGAATTGGAAACTGTGACGCAACGCCCCAGGAAGAC...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCACTCCATTCCCACCCTaGTGGGTTATCTTCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSTPFPP*WVIFSQ Trigger: CTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGT...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCGCACTCACTAGGGGGTaGAGAAAGAAGCCACAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSALTRG*RKKPQR Trigger: TCTTTGTGGCTTCTTTCTCCACCCCCTAGTGAGTGC...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACATGGCGGAAGGGAGGATaGAAGCACCTCTTCTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LGERDLTAISAEDRAAATWRKGG*KHLFYR Trigger: TCTGTAGAAGAGGTGCTTCCATCCTCCCTTCCGCCA...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 90 bp | ACAGGAGGGAGGCCTGGTTGTGAGAAGCCTTCTACACGATTCATCTaGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: TGGRPGCEKPSTRFI*DTHFPDPIPHPQKL Trigger: TAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAATCGTGTAGAAGGCTTCTCACAACCAGGCCTCCCTCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACGAAGTGGCGCCCCCTaGAGGACAGAGCTGCGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKRSGAP*RTELRP Trigger: GGGACGCAGCTCTGTCCTGCAGGGGGCGCCACTTCG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGGCAAGGAAGGAAAGCTaGAGGCACTCTGGGTGGACA | + |
|
Preference number: 2 (lower is better) Translates to: IHLGHSFPRSHPPSPEATARKES*RHSGWT Trigger: TGTCCACCCAGAGTGCCTCCAGCTTTCCTTCCTTGC...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGCAGGAAACTGGACTTCAAATCGAACACGGTCGATATCATCACTGACCCAAATCAGGCAGAGGGCTaGGCTGTGCAGACCGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ISRKLDFKSNTVDIITDPNQAEG*AVQTAW Trigger: CCAGGCGGTCTGCACAGCTCAGCCCTCTGCCTGATT...TGGGTCAGTGATGATATCGACCGTGTTCGATTTGAAGTCCAGTTTCCTGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGGTTGGCAGCATGTGCTaGGCACACCCTCATATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: IHLGHSFPRSHPPSPEATVGSMC*AHPHIS Trigger: GGAAATATGAGGGTGTGCTCAGCACATGCTGCCAAC...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCAATCATTATGCAGATaGCACTTTATATGCCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSQSLCR*HFICLM Trigger: CATCAGGCATATAAAGTGGCATCTGCATAATGATTG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGATGGGCAGAACTCTCTaGTCACAAGCATGCAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: LSCISYPSEQCGAPWEALMGRTL*SQACSI Trigger: GATACTGCATGCTTGTGAGCAGAGAGTTCTGCCCAT...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTGAACAGATAGGAAGATaGAATGTACCTGAACTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: RGQARSPGEVALKAGAQSEQIGR*NVPELH Trigger: ATGAAGTTCAGGTACATTCCATCTTCCTATCTGTTC...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACTTCCAGAGGAGTTCATaGGGATTCTGCTGTCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYFQRSS*GFCCHK Trigger: CTTATGACAGCAGAATCCCCATGAACTCCTCTGGAA...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 90 bp | TTTACACAGTGCACCAGATCCACAAGGCTTGCACACTTAGACTCCTaGGTTCAATCTGCATGGCGGAAGGGAGGATGGAAGCACCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FTQCTRSTRLAHLDS*VQSAWRKGGWKHLF Trigger: GAAGAGGTGCTTCCATCCTCCCTTCCGCCATGCAGATTGAACCAAGGAGTCTAAGTGTGCAAGCCTTGTGGATCTGGTGCACTGTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCCTTTCAATAGTCATCTaGATATGTAACCTCCCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: YCQKSAPYTSELCERLASLSIVI*ICNLPQ Trigger: CTGGGGGAGGTTACATATGCAGATGACTATTGAAAG...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACAAAAAAGGAGAATATATaGATGTGCAGCCCCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LGERDLTAISAEDRAAATKKENI*MCSPLT Trigger: GGTCAGGGGGCTGCACATCCATATATTCTCCTTTTT...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGCTGTGGAGGAAGACCTaGCACATTCAGTTCCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: IHLGHSFPRSHPPSPEATLWRKT*HIQFHK Trigger: TTTGTGGAACTGAATGTGTCAGGTCTTCCTCCACAG...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCATAAAGCGACTTACATaGCCAATCCTGTTTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GERSLLPRDNSPWSSVHSIKRLT*PILFSP Trigger: AGGAGAAAACAGGATTGGGCATGTAAGTCGCTTTAT...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACACTACACGATTCATCTTaGACACTCATTTCCCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: LGERDLTAISAEDRAAATLHDSS*TLISQI Trigger: GATCTGGGAAATGAGTGTCCAAGATGAATCGTGTAG...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAAAAAACAGCCCCCGAGTaGCCCGTGCAAAGTGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKKTAPE*PVQSGI Trigger: GATGCCACTTTGCACGGGTCACTCGGGGGCTGTTTT...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 49% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACTGAAAAGTGGAAGCTaGGAGAGGGCAGGGTATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKLKSGS*ERAGYG Trigger: GCCATACCCTGCCCTCTCTCAGCTTCCACTTTTCAG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR GCA 90 bp | ATAAGCAGGAAACTGGACTTCAAATCGAACACGGTCGATATCATCACTGACCCAAAGCACCCAGCAAGGTaGAGGAACCCAGTGTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ISRKLDFKSNTVDIITDPKHPAR*RNPVCL Trigger: CAAACACACTGGGTTCCTGCACCTTGCTGGGTGCTT...TGGGTCAGTGATGATATCGACCGTGTTCGATTTGAAGTCCAGTTTCCTGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACACTTTCCAGGACCTTaGCTCTCTCCCTTCCAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKHFPGP*LSPFQL Trigger: CAGCTGGAAGGGAGAGAGCCAAGGTCCTGGAAAGTG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 90 bp | GGATGGTTTCTCTCTCTTGCCACTTTTGACTGGAGCATTACCAGTTaGCCTGCAACTTCACTAGAGATGCTTTCCCTTTATGCCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GWFLSLATFDWSITS*PATSLEMLSLYASV Trigger: CACAGAGGCATAAAGGGAAAGCATCTCTAGTGAAGTTGCAGGCAAACTGGTAATGCTCCAGTCAAAAGTGGCAAGAGAGAGAAACCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCACAGACTACAGTGTTGTaGGTATACAAGACAAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSQTTVL*VYKTKQ Trigger: CTGCTTTGTCTTGTATACTCACAACACTGTAGTCTG...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACTCTCTCCCTTCCAGCTaGGGATGGTTTCTCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYSLPSS*GWFLSL Trigger: AAGAGAGAGAAACCATCCTCAGCTGGAAGGGAGAGA...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCAGCTAATCATGTTCGTTaGGTTTATTCTAGAATGACC | + |
|
Preference number: 2 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSANHVR*VYSRMT Trigger: GGTCATTCTAGAATAAACTCAACGAACATGATTAGC...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAAGATGGGAAAGGAATTTaGAATGTTACTGAAGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKDGKGI*NVTEEP Trigger: TGGTTCTTCAGTAACATTCCAAATTCCTTTCCCATC...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | GCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTaGAGGACAGAGCTGCGTCCCTCCTCCAGAAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AGGGRCCRSGAP*RTELRPSSRSC Trigger: GCAGCTTCTGGAGGAGGGACGCAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | TCCACCTCTGGCTGGGGGAGGCAGATGTTGTCGAAGTaGCGCCCCCTGCAGGACAGAGCTGCGTCCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: STSGWGRQMLSK*RPLQDRAASLL Trigger: GAGGAGGGACGCAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAGAGGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | TCCCAGCCTGTCAGCATCCAGGGGCACCTCCCAGCTTaGCCAGATGCAAGGCCAGCACAGCGAGGTAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQPVSIQGHLPA*PDARPAQRGSR Trigger: CCTGCTACCTCGCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAGGCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | GCCAAGCACGAGCCACCTGGCTACACTCGGCATTCCTaGGGGTTTAGCGGAGGTCCCACCCCAAGGCACGGA | + |
|
Preference number: 3 (lower is better) Translates to: AKHEPPGYTRHS*GFSGGPTPRHG Trigger: TCCGTGCCTTGGGGTGGGACCTCCGCTAAACCCTCAGGAATGCCGAGTGTAGCCAGGTGGCTCGTGCTTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTGCTTCCGGAGAAAGATaGCTGAGGGCGAGGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGQARSPGEVALKAGAQSASGER*LRARTE Trigger: CTCTGTCCTCGCCCTCAGCAATCTTTCTCCGGAAGC...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCACCAGCACCACCCCTGCCCAGTGTGAAGACAGCTTaGCTCACCTTCCAGAGGAGTTCATGGGGATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: APAPPLPSVKTA*LTFQRSSWGFC Trigger: GCAGAATCCCCATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTGGTGCTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCTGTGTCCCATGAGGACCATGTCCTGAAGCAGAGGTaGCTGAGAGAGCCCAAGACTGGAGTGGGTGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVSHEDHVLKQR*LREPKTGVGVG Trigger: CCCAACACCCACTCCAGTCTTGGGCTCTCTCAGCCACCTCTGCTTCAGGACATGGTCCTCATGGGACACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | TCCCCTCCTTCAAATCCAAACTGCGGCAATGGGCCCTaGCAACTCCAGCTCTGGCCCCCATGCATCACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SPPSNPNCGNGP*QLQLWPPCITG Trigger: TCCTGTGATGCATGGGGGCCAGAGCTGGAGTTGTCAGGGCCCATTGCCGCAGTTTGGATTTGAAGGAGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | GCCAACCACATCTGGCATAGCACTGCATTCCAGCCATaGTGGCTGAGGTCTGAGGGCTTCTGTGGGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: ANHIWHSTAFQP*WLRSEGFCGLT Trigger: GGTCAGCCCACAGAAGCCCTCAGACCTCAGCCATCATGGCTGGAATGCAGTGCTATGCCAGATGTGGTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | CAGTTTGCTAGGAGAGAGAGATTTGACAGCCATCTCTaGCGAGGACAGAGCAGCTGCCACAGGCTGGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QFARRERFDSHL*RGQSSCHRLGA Trigger: GGCACCCAGCCTGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAGCAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | CAGCTACAGCCTAAAACCAAGCAGCACACAGTGAGTTaGACACAGGTGTGTACCTCCCGGGCAGGGCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QLQPKTKQHTVS*TQVCTSRAGPY Trigger: GTAGGGCCCTGCCCGGGAGGTACACACCTGTGTCCAACTCACTGTGTGCTGCTTGGTTTTAGGCTGTAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | GACCGCCTGGCCCAGGGCCACCAGACTACAGTGTTGTaGGTATACAAGACAAAGCAGCAGATACCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: DRLAQGHQTTVL*VYKTKQQIPSL Trigger: CAGGCTGGGTATCTGCTGCTTTGTCTTGTATACTCACAACACTGTAGTCTGGTGGCCCTGGGCCAGGCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | GGTGTGTACCTCCCGGGCAGGGCCCTACTAAGTGCCTaGCAGCTCCCCAATGTGAGTTTCCTTAAGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVYLPGRALLSA*QLPNVSFLKTL Trigger: AAGGGTCTTAAGGAAACTCACATTGGGGAGCTGTCAGGCACTTAGTAGGGCCCTGCCCGGGAGGTACACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | CTCATCAGCTACAGCCTAAAACCAAGCAGCACACAGTaGGTTGGACACAGGTGTGTACCTCCCGGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LISYSLKPSSTQ*VGHRCVPPGQG Trigger: GCCCTGCCCGGGAGGTACACACCTGTGTCCAACTCACTGTGTGCTGCTTGGTTTTAGGCTGTAGCTGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | ACTGGACTTCAAATCGAACACGGTCGATATCATCACTaGCCCAGGCTGGGCTGCACAGGAGAGGGAGGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGLQIEHGRYHH*PRLGCTGEGGG Trigger: ACCGCCTCCCTCTCCTGTGCAGCCCAGCCTGGGTCAGTGATGATATCGACCGTGTTCGATTTGAAGTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | CTGAGGTGCACCTGTCCCACAGCTGACCAGGGAGACTaGAGCGAACAGTCCAGCAAGCCAGAAGTAGGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRCTCPTADQGD*SEQSSKPEVGR Trigger: TCTACCTACTTCTGGCTTGCTGGACTGTTCGCTTCAGTCTCCCTGGTCAGCTGTGGGACAGGTGCACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | AGGAGAAGAACACTGAATGAGAACCTGGTTGCCAGCTaGCTGGCTAGAGCGCAGACAAGATGCAGCAGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: RRRTLNENLVAS*LARAQTRCSSG Trigger: GCCGCTGCTGCATCTTGTCTGCGCTCTAGCCAGGCAGCTGGCAACCAGGTTCTCATTCAGTGTTCTTCTCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | AGCCCTCAAGGCTGGAGCACAGTCTTCCTGGGGCGTTaGGTCACAGTTTCCAATTCTGACATTGTGGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SPQGWSTVFLGR*VTVSNSDIVAG Trigger: CCCTGCCACAATGTCAGAATTGGAAACTGTGACGCAACGCCCCAGGAAGACTGTGCTCCAGCCTTGAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | CTGAGCATGGGAGTAGCACGAATGGGCAGAACTCTCTaGTCACAAGCATGCAGTATCAGGCGAGGAGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSMGVARMGRTL*SQACSIRRGVP Trigger: GGGGACTCCTCGCCTGATACTGCATGCTTGTGAGCAGAGAGTTCTGCCCATTCGTGCTACTCCCATGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCAAGCACCCAGCAAGGTGCAGGAACCCAGTGTGTTTaGATCACTTTCCAGGACCTTGGCTCTCTCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASTQQGAGTQCV*ITFQDLGSLPS Trigger: GGAAGGGAGAGAGCCAAGGTCCTGGAAAGTGATCCAAACACACTGGGTTCCTGCACCTTGCTGGGTGCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCCACACCGAGGCCACACCCAACTCCATTCCCACCCTaGTGGGTTATCTTCTCACAGTCAGAATCAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ATPRPHPTPFPP*WVIFSQSESGR Trigger: TCTGCCTGATTCTGACTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGTTGGGTGTGGCCTCGGTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCCATCTCTGCCGAGGACAGAGCAGCTGCCACAGGCTaGGTGCCGAGTCCCAACCTGGAATGCTTTATATTT | + |
|
Preference number: 3 (lower is better) Translates to: AISAEDRAAATG*VPSPNLECFIF Trigger: AAATATAAAGCATTCCAGGTTGGGACTCGGCACCCAGCCTGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | GGTATGGCTTGCATAGAAGCTGGTGGCTGTGTCCCATaGGGACCATGTCCTGAAGCAGAGGTGGCTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GMACIEAGGCVP*GPCPEAEVAER Trigger: TCTCTCAGCCACCTCTGCTTCAGGACATGGTCCTCATGGGACACAGCCACCAGCTTCTATGCAAGCCATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | AAATCGAACACGGTCGATATCATCACTGACCCAGGCTaGGCTGCACAGGAGAGGGAGGCGGTGGAAGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSNTVDIITDPG*AAQEREAVEGF Trigger: AAAACCTTCCACCGCCTCCCTCTCCTGTGCAGCCCAGCCTGGGTCAGTGATGATATCGACCGTGTTCGATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCAGGAACCCAGTGTGTTaGGATCACTTTCCAGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: YCQKSAPYTSELCERLASRNPVC*DHFPGP Trigger: AGGTCCTGGAAAGTGATCCAAACACACTGGGTTCCT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | TATCAACATCAGCACCAGCACCACCCCTGCCCAGTGTaGAGACAGCTTGGCTCACCTTCCAGAGGAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: YQHQHQHHPCPV*RQLGSPSRGVH Trigger: ATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTGGTGCTGGTGCTGATGTTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | TGGGTAGCCAACCGACATCTTCCCTGCACCTTGTTCTaGTACTTCCCTGCACCTTGTTCTGCTAACACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WVANRHLPCTLF*YFPAPCSANTG Trigger: CCCTGTGTTAGCAGAACAAGGTGCAGGGAAGTAGCAGAACAAGGTGCAGGGAAGATGTCGGTTGGCTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | AAACTCCAAACCAGGGCCATCGAGCAAGCAGTCCACTaGTCTGCTGTGAGATGGGATGACTTACTGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLQTRAIEQAVH*SAVRWDDLLAP Trigger: AGGAGCCAGTAAGTCATCCCATCTCACAGCAGAGCAGTGGACTGCTTGCTCGATGGCCCTGGTTTGGAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | TCTCTGCCGAGGACAGAGCAGCTGCCACAGGCTGGGTaGCGAGTCCCAACCTGGAATGCTTTATATTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLPRTEQLPQAG*RVPTWNALYFL Trigger: AAGAAAATATAAAGCATTCCAGGTTGGGACTCGGCACCCAGCCTGTGGCAGCTGCTCTGTCCTCGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GGCCTGGTTGTGAGAAGCCTTCTACACGATTCATCTTaGACACTCATTTCCCAGATCCCATCCCCCATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLVVRSLLHDSS*TLISQIPSPIP Trigger: GGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAATCGTGTAGAAGGCTTCTCACAACCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | ACTGACATCTGGATAAGCCGGGTTGGCAGCATGTGCTaGGCACACCCTCATATTTCCCCAGACATGTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TDIWISRVGSMC*AHPHISPDMWV Trigger: TACCCACATGTCTGGGGAAATATGAGGGTGTGCTCAGCACATGCTGCCAACCCGGCTTATCCAGATGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GTGAAGACAGCTTGGCTCACCTTCCAGAGGAGTTCATaGGGATTCTGCTGTCATAAGCACTCACTAGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VKTAWLTFQRSS*GFCCHKHSLGG Trigger: ACCCCCTAGTGAGTGCTTATGACAGCAGAATCCCCATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCAAGGGCAGGGTATGGCTaGCATAGAAGCTGGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSRAGYG*HRSWWL Trigger: CAGCCACCAGCTTCTATGCAAGCCATACCCTGCCCT...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GCCATCGAGCAAGCAGTCCACTGCTCTGCTGTGAGATaGGATGACTTACTGGCTCCTGTTTTAATTTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: AIEQAVHCSAVR*DDLLAPVLIFP Trigger: GGGGAAAATTAAAACAGGAGCCAGTAAGTCATCCCATCTCACAGCAGAGCAGTGGACTGCTTGCTCGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | CGGAAGGGAGGATGGAAGCACCTCTTCTACAGATTCTaGACCCACAAATGCTGTATCAACATCAGCACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKGGWKHLFYRF*THKCCINISTS Trigger: GCTGGTGCTGATGTTGATACAGCATTTGTGGGTTCAGAATCTGTAGAAGAGGTGCTTCCATCCTCCCTTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | AGAAATGCAGGAGAGAAAAGCAAGCACCCAGCAAGGTaGAGGAACCCAGTGTGTTTGGATCACTTTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RNAGEKSKHPAR*RNPVCLDHFPG Trigger: TCCTGGAAAGTGATCCAAACACACTGGGTTCCTGCACCTTGCTGGGTGCTTGCTTTTCTCTCCTGCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | GTCAGAGTTTACACAGTGCACCAGATCCACAAGGCTTaGACACTTAGACTCCTTGGTTCAATCTGCATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: VRVYTVHQIHKA*TLRLLGSICMA Trigger: CGCCATGCAGATTGAACCAAGGAGTCTAAGTGTGCAAGCCTTGTGGATCTGGTGCACTGTGTAAACTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACACGGCATCACCACCCTaGGAGGCACCATGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYTASPP*EAPCSP Trigger: TGGAGAGCATGGTGCCTCCAAGGGTGGTGATGCCGT...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | TGTGAGTATACAAGACAAAGCAGCAGATACCCAGCCTaGCACCCATCACTGTATCAGACTTCTGAGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CEYTRQSSRYPA*HPSLYQTSEPE Trigger: TTCTGGCTCAGAAGTCTGATACAGTGATGGGTGGCAGGCTGGGTATCTGCTGCTTTGTCTTGTATACTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | AACACGTCACAAAAGGTTACACTTTCAATAGTCATCTaGATATGTAACCTCCCCCAGGGAGCCCTCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NTSQKVTLSIVI*ICNLPQGALSQ Trigger: CTGGCTGAGGGCTCCCTGGGGGAGGTTACATATGCAGATGACTATTGAAAGTGTAACCTTTTGTGACGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | GATCCACGGGGACTTCCTAGGGATGGGAAAGGAATTTaGAATGTTACTGAAGAACCAGAAGCAATGGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DPRGLPRDGKGI*NVTEEPEAMVS Trigger: AGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTTCCCATCCCTAGGAAGTCCCCGTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | CATTTCCCCAAAATACCTATGTCAGAGTTTACACAGTaGACCAGATCCACAAGGCTTGCACACTTAGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: HFPKIPMSEFTQ*TRSTRLAHLDS Trigger: GGAGTCTAAGTGTGCAAGCCTTGTGGATCTGGTGCACTGTGTAAACTCTGACATAGGTATTTTGGGGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR GCA 72 bp | TTCAGTTCAATGCTGAAGGTATTTATTAGCCAACACTaGACTGAAGGAGGCTGGAGCCCCAAAGAAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSSMLKVFISQH*TEGGWSPKEML Trigger: CAGCATTTCTTTGGGGCTCCAGCCTCCTTCAGTGCAGTGTTGGCTAATAAATACCTTCAGCATTGAACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR TCA 72 bp | TCAAGGCTAATCATGTTCGTTGAGTTTATTCTAGAATaGCCTGGTACTCTTCCCCTCTCCACCTCAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLIMFVEFILE*PGTLPLSTSSN Trigger: GTTACTTGAGGTGGAGAGGGGAAGAGTACCAGGTCATTCTAGAATAAACTCAACGAACATGATTAGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACAGCAGCGTTCTTCATaGCATAATGAAACCGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKQQRSS*HNETVS Trigger: ACTTACGGTTTCATTATGCAATGAAGAACGCTGCTG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGAACACACACTTTCTGTTaGGTCTTTTCAGCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGIWNVTEEPEAMVSENGTHTFC*VFSAQE Trigger: TTCCTGAGCTGAAAAGACCAAACAGAAAGTGTGTGT...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CCA 72 bp | TCTCTAAGGAAGTGTGAGCTTGTATCTAAAAGAATCTaGTTACAGAATTTTAGGACTACCAATAGTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRKCELVSKRI*LQNFRTTNSGK Trigger: CTTGCCACTATTGGTAGTCCTAAAATTCTGTAACCAGATTCTTTTAGATACAAGCTCACACTTCCTTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGTGGCGAGGTCTGGGGTaGTGGTGGCAGGACGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELWRGLG*WWQDGA Trigger: GGCCCCGTCCTGCCACCAGCACCCCAGACCTCGCCA...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGCAGGGCTGCTGCCGCTaGCGTACTTGTGGCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELQGCCR*RTCGGG Trigger: GCCACCGCCACAAGTACGTCAGCGGCAGCAGCCCTG...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCAGGTGGGGGCCTGTTaGGGATGCGGGCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSQVGAC*GCGPGQ Trigger: CTGCCCTGGCCCGCATCCCCAACAGGCCCCCACCTG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | TGCCAGCCATCCACCTCTGGCTGGGGGAGGCAGATGTaGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CQPSTSGWGRQM*SKWRPLQDRAA Trigger: CGCAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAGAGGTGGATGGCTGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTGGGGGTGCCTGGTCCTaGTGCCTTCCAGCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSGGAWS*CLPARC Trigger: ACAGCGTGCTGGAAGGCATCAGGACCAGGCACCCCC...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCACTTGTGGCGGTGGCTaGCGAGGTCTGGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSTCGGG*RGLGCW Trigger: CCAGCACCCCAGACCTCGCCAGCCACCGCCACAAGT...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCACGTACTTGTGGCGGTaGCTGGCGAGGTCTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSTYLWR*LARSGV Trigger: CACCCCAGACCTCGCCAGCCACCGCCACAAGTACGT...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGCTATGGGGACTCGGGTaGCATCATGGTGACCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELLWGLG*HHGDRL Trigger: AAGACGGTCACCATGATGCCACCCGAGTCCCCATAG...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGCGAGGTCTGGGGTGCTaGTGGCAGGACGGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALRGLGC*WQDGAE Trigger: CTCGGCCCCGTCCTGCCACCAGCACCCCAGACCTCG...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGACTTTTTCTTGGCCCTaGGTACTCAGGTGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELTFSWP*VLRWGP Trigger: AGGCCCCCACCTGAGTACCCAGGGCCAAGAAAAAGT...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTGGTCAGGCTCAGAGATaGAGGGACCCAGAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSGQAQR*RDPERH Trigger: GTGCCTCTCTGGGTCCCTCCATCTCTGAGCCTGACC...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACCTGCCCGGGAGACACTaGGGGCCTTGGATGGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYLPGRH*GPWMVR Trigger: ACGGACCATCCAAGGCCCTCAGTGTCTCCCGGGCAG...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACCCAGAGAGGCACCGTTaGCAGCCAGCTGCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYPERHR*QPAALP Trigger: GGGCAGAGCAGCTGGCTGTCAACGGTGCCTCTCTGG...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGTGCTCCCACACCATCTaGCAGAAGTCATGGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELCSHTI*QKSWHV Trigger: TACGTGCCATGACTTCTGGCAGATGGTGTGGGAGCA...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTGGGGGAGGCAGATGTTGTCGAAGTGGCGCCCCCTGCAGGACAGAGCTGATCTGCCAGAAGTCATaGCACGTATGTGGCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGGGRCCRSGAPCRTELICQKS*HVCGKG Trigger: GCCCTTGCCACATACGTGCCATGACTTCTGGCAGAT...CAGCTCTGTCCTGCAGGGGGCGCCACTTCGACAACATCTGCCTCCCCCAGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGGGTCTGGGGTGCTGGTaGCAGGACGGGGCCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRGLGCW*QDGAEG Trigger: ACCCTCGGCCCCGTCCTGCCACCAGCACCCCAGACC...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTAGGTCCAGGCTGTTGTaGGAACGGCAGTACAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSRSRLL*ERQYKA Trigger: AGCCTTGTACTGCCGTTCTCACAACAGCCTGGACCT...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCCTCCTCCTCTGCAGTaGCCATGGCGATCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSPPPLQ*PWRSHS Trigger: TGAATGTGATCGCCATGGTCACTGCAGAGGAGGAGG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGGCACTCTTGCCCCGTaGTTTCCACCGACAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYGTLAP*FPPTAC Trigger: GCACGCTGTCGGTGGAAAGCACGGGGCAAGAGTGCC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGCCTCCAGGCACTCTTaGCCCGTGCTTTCCACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYASRHS*PVLSTD Trigger: GTCGGTGGAAAGCACGGGGCAAGAGTGCCTGGAGGC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCTCTGGCTGTCTGCGTaGATCAGACCCCTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSLWLSA*IRPLFI Trigger: GATGAAGAGGGGTCTGATGCACGCAGACAGCCAGAG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACGTCATGGCACGTATGTaGCAAGGGCCCCTGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QARESASAEHGSSTNGQNVMARM*QGPLGG Trigger: GCCACCCAGGGGCCCTTGCCACATACGTGCCATGAC...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTTCTACCCATCTCGCCTaGTGGCTCTTGCTGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSSTHLA*WLLLRN Trigger: GTTTCTCAGCAAGAGCCAGCAGGCGAGATGGGTAGA...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGGTCTCTTCTGTGCCTaGGGGCCCGTCATCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYGLFCA*GPVIFC Trigger: GCAGAAGATGACGGGCCCGCAGGCACAGAAGAGACC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCAAGGTTGGAGGACACTaGAGACGCCTGGATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSKVGGH*RRLDEA Trigger: AGCTTCATCCAGGCGTCTCCAGTGTCCTCCAACCTT...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCCGCAGAGACCGGCTCTaGCTGTCTGCGTGCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASRRDRL*LSACIR Trigger: TCTGATGCACGCAGACAGCCAGAGCCGGTCTCTGCG...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACTCCCGCATCTCCGGCTaGCTGTACACCAGTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QARESASAEHGSSTNGQNSRISG*LYTSSS Trigger: CGAGGAACTGGTGTACAGCCAGCCGGAGATGCGGGA...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACACAGCGTGCACTCGATaGCATTGCTGTCCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QARESASAEHGSSTNGQNTACTR*HCCPAG Trigger: GCCTGCTGGACAGCAATGTCATCGAGTGCACGCTGT...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGCGAAGCACAGGAACCTaGGGTGCAGCCTCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRRSTGT*GAASRV Trigger: GACCCTGGAGGCTGCACCTCAGGTTCCTGTGCTTCG...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTTGGCTAGTTCTGGAGTaGTCACTGTGTGTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSWLVLE*SLCVRW Trigger: CCATCTCACACACAGTGAGCACTCCAGAACTAGCCA...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CACCCAACTCCATTCCCACCCTGGTGGGTTATCTTCTCACAGTCAGAATCAGGCCGGCTCCAGGTGGGCTaGCGTCTAATTGGGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPTPFPPWWVIFSQSESGRLQVG*RLIGGG Trigger: TCCACCCCCAATTAGACGCCAGCCCACCTGGAGCCG...GCCTGATTCTGACTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGTTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 72 bp | AGCACCAGCACCACCCCTGCCCAGTGTGAAGACAGCTaGGCTCACCTTCCAGAGGAGTTCATGGGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STSTTPAQCEDS*AHLPEEFMGIL Trigger: CAGAATCCCCATGAACTCCTCTGGAAGGTGAGCCAAGCTGTCTTCACACTGGGCAGGGGTGGTGCTGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACACTTGTGGCCTCCTGCTaGAGCCGTGACACATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATLVASC*SRDTFG Trigger: GCCAAATGTGTCACGGCTTCAGCAGGAGGCCACAAG...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTTGGGGGTGGAGAATTTaGCTGTTCAGTGCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQARSPGEVALKAGAQSWGWRI*LFSADL Trigger: AAGATCTGCACTGAACAGTCAAATTCTCCACCCCCA...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACAGCCTGGATGAAGCTCTaGGAGCAGCTGAGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATAWMKL*EQLREL Trigger: CAACTCCCTCAGCTGCTCTCAGAGCTTCATCCAGGC...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGAGTGCTCACTGTGTGTaGGATGGAACTGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALSAHCV*DGTGPW Trigger: CCAGGGGCCAGTTCCATCTCACACACAGTGAGCACT...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCTCTCCGAAGTCAGCTTaGACAGCTAAGCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASSPKSA*TAKPAS Trigger: GCTGGCTGGCTTAGCTGTGCAAGCTGACTTCGGAGA...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCTCCAACAGGATGGCTaGTTTGCTGTGAGTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LSASRGTSQLDQMQGQHSLQQDG*FAVSNT Trigger: AGTGTTACTCACAGCAAAGCAGCCATCCTGTTGGAG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACCCATGCCTCTCACCATaGTGTTCATCACCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYPCLSP*CSSPPG Trigger: GCCTGGAGGTGATGAACAGCATGGTGAGAGGCATGG...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACTTGGGCCAGTATCGATaGCTTTTGGTCCGTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYLGQYR*LLVRPP Trigger: GGGTGGACGGACCAAAAGCCATCGATACTGGCCCAA...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGCCCTGCACCTGGCCATaGCAGGAAGAGGGGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPEANTADQSTCGSNEKPCTWP*QEEGFP Trigger: AGGGAACCCCTCTTCCTGCCATGGCCAGGTGCAGGG...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGTCAGCACCCTGCACCTaGCCATGGCAGGAAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHLGHSFPRSHPPSPEATSAPCT*PWQEEG Trigger: CCCCTCTTCCTGCCATGGCCAGGTGCAGGGTGCTGA...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACACCCGCTCCTTCACGCTaGTTAGGTCAGGCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATPAPSR*LGQAQR Trigger: TCTCTGAGCCTGACCTAACCAGCGTGAAGGAGCGGG...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 72 bp | CCTGCCCTTAGGTGCAGTTTGCTAGGAGAGAGAGATTaGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PALRCSLLGERD*TAISAEDRAAA Trigger: GGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAGCAAACTGCACCTAAGGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGCCTGCTGGCTCTTGCTaGGAAACCAAAGGCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALPAGSC*ETKGRS Trigger: ACTTCGGCCTTTGGTTTCTCAGCAAGAGCCAGCAGG...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCACACGCTGCCATTGGTaGCGGTGCCGTTCAAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASTRCHW*RCRSSN Trigger: ATTACTTGAACGGCACCGTCACCAATGGCAGCGTGT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGTGTAATCGGCCCTCATaGTGTCACTCCCAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALCNRPS*CHSQGC Trigger: GCATCCCTGGGAGTGACATCATGAGGGCCGATTACA...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACATCTTCTTCAGGGCTCTaGGCCTCTCGTCTATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATSSSGL*ASRLWG Trigger: TCCCCATAGACGAGAGGCTCAGAGCCCTGAAGAAGA...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCACCGCCGCCGCCATGGTaGTTGGTGGCTGTAAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSPPPPW*LVAVRG Trigger: ACCCCTTACAGCCACCAAGCACCATGGCGGCGGCGG...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGCACAGGAACCTGAGGTaGAGCCTCCAGGGTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLGHSFPRSHPPSPEATHRNLR*SLQGLL Trigger: GAGGAGACCCTGGAGGCTGCACCTCAGGTTCCTGTG...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCATCACCTCCAGGCTGTaGCGTTTATTCACCGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASITSRL*RLFTVP Trigger: TGGCACGGTGAATAAACGCCACAGCCTGGAGGTGAT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGTGACTTCAGTGTCATaGCCTCCATGCCTCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYVTSVS*PPCLSP Trigger: TGGTGAGAGGCATGGAGGCCATGACACTGAAGTCAC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACATCGCTCTCACTGCTGTaGATCAGCATGGTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATSLSLL*ISMVAS Trigger: GGATGCCACCATGCTGATCCACAGCAGTGAGAGCGA...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | GGCGAGCGAAGCTTGTTACCGAGAGACAACAGCCCATGGAGCAGTGTGCATAGCCTCCTGCTGAAGCCGTaGCACATTTGGCACATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GERSLLPRDNSPWSSVHSLLLKP*HIWHIE Trigger: TTCTATGTGCCAAATGTGTCACGGCTTCAGCAGGAG...GCTATGCACACTGCTCCATGGGCTGTTGTCTCTCGGTAACAAGCTTCGCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACTTTCTTTGGTCGGGATaGGCTCCACTCGATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYFLWSG*APLDSP Trigger: AGGAGAATCGAGTGGAGCTCATCCCGACCAAAGAAA...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGACATCCTCTGCTCCCTaGGGAATCGCAGCATCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHLGHSFPRSHPPSPEATTSSAP*GIAASW Trigger: CCACGATGCTGCGATTCCTCAGGGAGCAGAGGATGT...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGCAGGGAGAACATCTCTaGCACCGGCCTTTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRQGEHL*HRPFLH Trigger: GTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCCTG...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAACTCCATTCCCACCCTGGTGGGTTATCTTCTCACAGTCAGAATCAGGCGAGCCCATTCAGCGCTaGCAACATCAGCGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPTPFPPWWVIFSQSESGEPIQR*QHQRSL Trigger: AAGAGACCGCTGATGTTGGCAGCGCTGAATGGGCTC...GCCTGATTCTGACTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGTTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAACTCCATTCCCACCCTGGTGGGTTATCTTCTCACAGTCAGAATCAGGCATCACATTCACCCCCTaGTCCCACACCATCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPTPFPPWWVIFSQSESGITFTP*SHTICQ Trigger: CTGGCAGATGGTGTGGGAGCAGGGGGTGAATGTGAT...GCCTGATTCTGACTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGTTGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGGTGTCATGGCCTCCATaGCTCTCACCATGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALVSWPP*LSPCCS Trigger: TGAACAGCATGGTGAGAGGCATGGAGGCCATGACAC...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCGGGCCCGTCATCTTCTaGTTCTCTAGATTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASGPVIF*FSRFLI Trigger: GATCAGGAATCTAGAGAAGCAGAAGATGACGGGCCC...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACGGGAAAATGCTGTCTTaGGAAGTATGGGTCTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYGKMLS*EVWVSE Trigger: CTCGGAGACCCATACTTCCCAAGACAGCATTTTCCC...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGAGGGCAGCCTGCAGCTaGGCACTGTATTCTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSCISYPSEQCGAPWEALRAACS*ALYSTF Trigger: GAAAGTAGAATACAGTGCCCAGCTGCAGGCTGCCCT...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | CTAGAGCGCAGACAAGATGCAGCAGCGGCAGAATCTTaGGTAAATGCAGAAGTTGAGGGCCACACGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LERRQDAAAAES*VNAEVEGHTAV Trigger: CACTGCCGTGTGGCCCTCAACTTCTGCATTTACCAAAGATTCTGCCGCTGCTGCATCTTGTCTGCGCTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | TGTCTCCTCTGTCCTTCCCCTGCCCTTAGGTGCAGTTaGCTAGGAGAGAGAGATTTGACAGCCATCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLLCPSPALRCS*LGERDLTAISA Trigger: GGCAGAGATGGCTGTCAAATCTCTCTCTCCTAGCAAACTGCACCTAAGGGCAGGGGAAGGACAGAGGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCATGGCTGCTTTGCTGTaGGTAACACTCCCAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASMAALL*VTLPMS Trigger: TGACATTGGGAGTGTTACTCACAGCAAAGCAGCCAT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACACATGGGGATATTGAGTaGCTTCAGTGTCATGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATHGDIE*LQCHGL Trigger: GAGGCCATGACACTGAAGTCACTCAATATCCCCATG...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCCAGATGTTTCTTCAGTaGCTTCTCCAGCTCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASQMFLQ*LLQLYP Trigger: TGGGTAGAGCTGGAGAAGCCACTGAAGAAACATCTG...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACATCGATTCTCCTCGTATaGGACAACTTCTCGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATSILLV*DNFSDP Trigger: CGGATCCGAGAAGTTGTCCCATACGAGGAGAATCGA...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGGCTTGGACCCCAGTTTaGGCCAGTATCGATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRAWTPV*ASIDGF Trigger: AAAGCCATCGATACTGGCCCAAACTGGGGTCCAAGC...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | TGCACCAGATCCACAAGGCTTGCACACTTAGACTCCTaGGTTCAATCTGCATGGCGGAAGGGAGGATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTRSTRLAHLDS*VQSAWRKGGWK Trigger: CTTCCATCCTCCCTTCCGCCATGCAGATTGAACCAAGGAGTCTAAGTGTGCAAGCCTTGTGGATCTGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | AGGCCTGGTTGTGAGAAGCCTTCTACACGATTCATCTaGGACACTCATTTCCCAGATCCCATCCCCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RPGCEKPSTRFI*DTHFPDPIPHP Trigger: GGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAATCGTGTAGAAGGCTTCTCACAACCAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGACCCATCTCGCCTGCTaGCTCTTGCTGAGAAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPEANTADQSTCGSNEKTHLAC*LLLRNQ Trigger: TTGGTTTCTCAGCAAGAGCCAGCAGGCGAGATGGGT...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACATACTGCGCAATGGTCTaGATCATGAACATCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATYCAMV*IMNILC Trigger: GCAGAGGATGTTCATGATCCAGACCATTGCGCAGTA...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACGTGGCTGGCGAGGTCTaGGGTGCTGGTGGCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYVAGEV*GAGGRT Trigger: CGTCCTGCCACCAGCACCCCAGACCTCGCCAGCCAC...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | CACCCAACTCCATTCCCACCCTGGTGGGTTATCTTCTCACAGTCAGAATCAGGCTGCTGTGGATCAGCATaGTGGCATCCGAGAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPTPFPPWWVIFSQSESGCCGSA*WHPRMS Trigger: AGACATTCTCGGATGCCACCATGCTGATCCACAGCA...GCCTGATTCTGACTGTGAGAAGATAACCCACCAGGGTGGGAATGGAGTTGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGACTGACACTTTTTCTTaGCCCTGGGTACTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRTDTFS*PWVLRW Trigger: CCACCTGAGTACCCAGGGCCAAGAAAAAGTGTCAGT...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGAGAGAGATTTGACAGCCATCTCTGCCGAGGACAGAGCAGCTGCCACAAACGCTCTACCTCGTTaGTGTACATCAGTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGERDLTAISAEDRAAATNALPR*CTSVQL Trigger: AAGCTGAACTGATGTACATCAACGAGGTAGAGCGTT...TGTGGCAGCTGCTCTGTCCTCGGCAGAGATGGCTGTCAAATCTCTCTCTCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGATCATGAACATCCTCTaGTCCCTGAGGAATCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPEANTADQSTCGSNEKIMNIL*SLRNRS Trigger: GCTGCGATTCCTCAGGGAGCAGAGGATGTTCATGAT...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGCTTGGAGCTGCATGTTaGCTAGTTCTGGAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPEANTADQSTCGSNEKLGAAC*LVLECS Trigger: TGAGCACTCCAGAACTAGCCAACATGCAGCTCCAAG...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCAGGTGAGCTGTCCTCCTaGAAGGTCTTTACGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSGELSS*KVFTES Trigger: GCTCTCCGTAAAGACCTTCCAGGAGGACAGCTCACC...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | TGTTCTCCTTTAGGGCTCACCATGCACACTAGGAAGTaGGGTAGCCAACCGACATCTTCCCTGCACCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSPLGLTMHTRK*GSQPTSSLHLV Trigger: AACAAGGTGCAGGGAAGATGTCGGTTGGCTACCCAACTTCCTAGTGTGCATGGTGAGCCCTAAAGGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCACAGCCCAGCCAGAAACTCCGCAGCTTCATCTTTAACACAACTCAGGTTGGCACATAGAACATaGCTCCGAAGAAAAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHSPARNSAASSLTQLRLAHRT*LRRKAE Trigger: CTCTGCTTTTCTTCGGAGTCATGTTCTATGTGCCAA...CCTGAGTTGTGTTAAAGATGAAGCTGCGGAGTTTCTGGCTGGGCTGTGGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACCGGCTCTGGCTGTCTaGGTGCATCAGACCCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKPALAV*VHQTPL Trigger: AAGAGGGGTCTGATGCACGCAGACAGCCAGAGCCGG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR GCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACTTCCCACACCCGCGCTaGAGTGAACCACGATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYFPHPR*SEPRWG Trigger: CCCCCATCGTGGTTCACTGCAGCGCGGGTGTGGGAA...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACAGGGAGTTGACGCTGTaGACGCTGCACACGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYRELTL*TLHTLP Trigger: TGGCAGCGTGTGCAGCGTTCACAGCGTCAACTCCCT...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCATCAGTGCCCCATTACTaGCACTTTTTCTTGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSSVPHY*HFFLAL Trigger: CAGGGCCAAGAAAAAGTGTCAGTAATGGGGCACTGA...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACGCTCCCGAAGGGTGTTaGGGCGAGCCATGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYAPEGC*GEPWGY Trigger: ATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGC...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGACCGCTGACGTACTTGTaGCGGTGGCTGGCGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGIWNVTEEPEAMVSENGPLTYL*RWLARS Trigger: AGACCTCGCCAGCCACCGCCACAAGTACGTCAGCGG...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| 3UTR CAA 72 bp | CTTCCAGCTGAGGATGGTTTCTCTCTCTTGCCACTTTaGACTGGAGCATTACCAGTTTGCCTGCAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPAEDGFSLLPL*TGALPVCLQLH Trigger: GTGAAGTTGCAGGCAAACTGGTAATGCTCCAGTCAAAAGTGGCAAGAGAGAGAAACCATCCTCAGCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACAATTTGACTGTTCAGTaGAGATCTTGTTCTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QARESASAEHGSSTNGQNNLTVQ*RSCSVC Trigger: ACAAACAGAACAAGATCTGCACTGAACAGTCAAATT...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCATCACTGCACTGGACATaGATGGGAGGCAAGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSSLHWT*MGGKIY Trigger: GTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGA...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | TGGCTCATCGATAAGCAGGCCGGCCTGAGCTTCAAGGGGGTGACAGAAGACTACTTTTTGTTTGGAATCTaGTCATATTCTGTGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: WLIDKQAGLSFKGVTEDYFLFGI*SYSVNT Trigger: GGTGTTCACAGAATATGAGCAGATTCCAAACAAAAA...GTAGTCTTCTGTCACCCCCTTGAAGCTCAGGCCGGCCTGCTTATCGATGAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGATCCTGGGCCACCTTCTaGGTTAGCTCCTCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGIWNVTEEPEAMVSENGSWATF*VSSSRA Trigger: GGCTCTGGAGGAGCTAACCCAGAAGGTGGCCCAGGA...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCACCGAGAAATGTACTTaGCATTTTCAATATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCQKSAPYTSELCERLASTEKCT*HFQYHL Trigger: CAGATGATATTGAAAATGCCAAGTACATTTCTCGGT...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR CCA 90 bp | ATAAGCAGGAAACTGGACTTCAAATCGAACACGGTCGATATCATCACTGACCCATGGCAGAACTATGCTTaGACCCCAGTTTGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISRKLDFKSNTVDIITDPWQNYA*TPVWAS Trigger: ACTGGCCCAAACTGGGGTCCAAGCATAGTTCTGCCA...TGGGTCAGTGATGATATCGACCGTGTTCGATTTGAAGTCCAGTTTCCTGCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR GCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACCCGAGTAGTGCTCACTaGACTGGACATGCATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYPSSAH*TGHAWE Trigger: CTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGG...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGAGATGTAGTGCCATTCTaGTCCGCCGACCACCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGIWNVTEEPEAMVSENGDVVPF*SADHHL Trigger: AAGGTGGTGGTCGGCGGATCAGAATGGCACTACATC...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGAGGTGTGGCGTCGGACTaGCTGGATTTCCTCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGIWNVTEEPEAMVSENGGVASD*LDFLQV Trigger: TACTTGGAGGAAATCCAGTCAGTCCGACGCCACACC...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS-3UTR TCA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACTCACAAAAATCCCCATaGAGAAGATGCCGAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYSQKSP*RRCRGA Trigger: TGCACCTCGGCATCTTCTTCATGGGGATTTTTGTGA...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAATCTGCTCATATTCTGTaGACACCATTCCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKSAHIL*TPFHLP Trigger: TGGAAGATGGAATGGTGTTCACAGAATATGAGCAGA...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| 3UTR CAA 72 bp | GTGGAGAAAGAAGCCACAAAGACACACACTTTCTGTTaGGTCTTTTCAGCTCAGGAAATAGGGAAAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VEKEATKTHTFC*VFSAQEIGKNV Trigger: TACATTTTTCCCTATTTCCTGAGCTGAAAAGACCAAACAGAAAGTGTGTGTCTTTGTGGCTTCTTTCTCCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | CGAGTTACCAGATCAGGGCTGCTGCCGCTGACGTACTTGTGGCGGTaGCTGGCGAGGTCTGGGGTGCTGGTGGCAGGACGGGGCCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVTRSGLLPLTYLWR*LARSGVLVAGRGRG Trigger: CCCTCGGCCCCGTCCTGCCACCAGCACCCCAGACCTCGCCAGCCACCGCCACAAGTACGTCAGCGGCAGCAGCCCTGATCTGGTAACTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GGGAGACCGTGCACTTCGTGGCCGCCCGTCTCCTCGGAAGGGCCCTaGTCCCGAAGGGTGTTGCGGCGAGCCATGGGGATATTGAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRPCTSWPPVSSEGP*SRRVLRRAMGILSD Trigger: GTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCAGGGCCCTTCCGAGGAGACGGGCGGCCACGAAGTGCACGGTCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | AGGGCTCTGAGCCTCTCGTCTATGGGGACTCGGGTGGCATCATGGTaGCCGTCTTCCCGCCCCGACACTCGGGCCACCGAGAGCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RALSLSSMGTRVASW*PSSRPDTRATESPF Trigger: GAATGGGCTCTCGGTGGCCCGAGTGTCGGGGCGGGAAGACGGTCACCATGATGCCACCCGAGTCCCCATAGACGAGAGGCTCAGAGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | CGGAGAGCTGCACCTTCCGAGTTACCAGATCAGGGCTGCTGCCGCTaGCGTACTTGTGGCGGTGGCTGGCGAGGTCTGGGGTGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRAAPSELPDQGCCR*RTCGGGWRGLGCWW Trigger: CCACCAGCACCCCAGACCTCGCCAGCCACCGCCACAAGTACGTCAGCGGCAGCAGCCCTGATCTGGTAACTCGGAAGGTGCAGCTCTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GTCTTCCCGCCCCGACACTCGGGCCACCGAGAGCCCATTCAGCGCTaGCAACATCAGCGGTCTCTTCTGTGCCTGCGGGCCCGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFPPRHSGHREPIQR*QHQRSLLCLRARHL Trigger: AAGATGACGGGCCCGCAGGCACAGAAGAGACCGCTGATGTTGGCAGCGCTGAATGGGCTCTCGGTGGCCCGAGTGTCGGGGCGGGAAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | ACCTCCAGGCTGTGGCGTTTATTCACCGTGCCACCGCCGCCGCCATaGTGCTTGGTGGCTGTAAGGGGTTCGCTCACCTCCTGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TSRLWRLFTVPPPPP*CLVAVRGSLTSCRD Trigger: GTCTCTGCAGGAGGTGAGCGAACCCCTTACAGCCACCAAGCACCATGGCGGCGGCGGTGGCACGGTGAATAAACGCCACAGCCTGGAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GGGTACTCAGGTGGGGGCCTGTTGGGGATGCGGGCCAGGGCAGCCTaGAGCTGGGCACTGTATTCTACTTTCTCTCGAAGCACAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: GYSGGGLLGMRARAA*SWALYSTFSRSTGT Trigger: GGTTCCTGTGCTTCGAGAGAAAGTAGAATACAGTGCCCAGCTGCAGGCTGCCCTGGCCCGCATCCCCAACAGGCCCCCACCTGAGTACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | TACTGTCAAAAGTCGGCACCCTACACCTCAGAGCTGTGTGAGAGGCTGGCGAGCCTGCCGCTGACGTACTaGTGGCGGTGGCTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YCQKSAPYTSELCERLASLPLTY*WRWLAR Trigger: CCTCGCCAGCCACCGCCACAAGTACGTCAGCGGCAG...GCTCGCCAGCCTCTCACACAGCTCTGAGGTGTAGGGTGCCGACTTTTGACAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | CTGGTCAGACGGACTTACAAGTTTGTGACCGTAGCACCCCTGGTGTaGATAGGGGACCGTGTAGGGATGCCTCTCCCGCATCTCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVRRTYKFVTVAPLV*IGDRVGMPLPHLRL Trigger: CAGCCGGAGATGCGGGAGAGGCATCCCTACACGGTCCCCTATGCACACCAGGGGTGCTACGGTCACAAACTTGTAAGTCCGTCTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | AAGGGCCCTGCTCCCGAAGGGTGTTGCGGCGAGCCATGGGGATATTaGGTGACTTCAGTGTCATGGCCTCCATGCCTCTCACCATGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGPAPEGCCGEPWGY*VTSVSWPPCLSPCC Trigger: ACAGCATGGTGAGAGGCATGGAGGCCATGACACTGAAGTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCAGGGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | TGCTCACTGCACTGGACATGCATGGGAGGCAAGATATACGGCTGCTaGCTTGGCAGTGAGGACCGGCTCCAGGTGGGCTGGCGTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: CSLHWTCMGGKIYGC*LGSEDRLQVGWRLI Trigger: AATTAGACGCCAGCCCACCTGGAGCCGGTCCTCACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GGGAAGTATGGGTCTCCGAGTAGTGCTCACTGCACTGGACATGCATaGGAGGCAAGATATACGGCTGCTGCCTTGGCAGTGAGGACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GKYGSPSSAHCTGHA*EARYTAAALAVRTG Trigger: GCCGGTCCTCACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGGAGACCCATACTTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GTGCATCAGACCCCTCTTCATCTGCCTCATGACCGTCTCGTAATCTaGGGTCGGCCTGTAAGACGGCACGATGATGGTGCTGTGGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VHQTPLHLPHDRLVI*GRPVRRHDDGAVAV Trigger: CACCGCCACAGCACCATCATCGTGCCGTCTTACAGGCCGACCCCAGATTACGAGACGGTCATGAGGCAGATGAAGAGGGGTCTGATGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAAGAGAGTCTGCGAGTGCTGAGCATGGGAGTAGCACGAATGGGCAGAACCTCGCCTGCTGGCTCTaGCTGAGAAACCAAAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QARESASAEHGSSTNGQNLACWL*LRNQRP Trigger: CGGCCTTTGGTTTCTCAGCAAGAGCCAGCAGGCGAG...GTTCTGCCCATTCGTGCTACTCCCATGCTCAGCACTCGCAGACTCTCTTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GGCCCTCATGATGTCACTCCCAGGGATGCTAAGGTTGGAGGACACTaGAGACGCCTGGATGAAGCTCTGAGAGCAGCTGAGGGAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPHDVTPRDAKVGGH*RRLDEALRAAEGVD Trigger: GTCAACTCCCTCAGCTGCTCTCAGAGCTTCATCCAGGCGTCTCCAGTGTCCTCCAACCTTAGCATCCCTGGGAGTGACATCATGAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGGGCCTCCAGGCACTCTaGCCCCGTGCTTTCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLPEANTADQSTCGSNEKGLQAL*PRAFHR Trigger: TCGGTGGAAAGCACGGGGCAAGAGTGCCTGGAGGCC...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | GGGAGAACATCTCTGACACCGGCCTTTCCTTCACAGGCTCTTTCTTaGCCCGCTCCTTCACGCTGGTTAGGTCAGGCTCAGAGATGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTSLTPAFPSQALS*PAPSRWLGQAQRWR Trigger: CCTCCATCTCTGAGCCTGACCTAACCAGCGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | CTGGGCACTGTATTCTACTTTCTCTCGAAGCACAGGAACCTGAGGTaGAGCCTCCAGGGTCTCCTCCTCTTCCTCGCTCTCACTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTVFYFLSKHRNLR*SLQGLLLFLALTAV Trigger: CACAGCAGTGAGAGCGAGGAAGAGGAGGAGACCCTGGAGGCTGCACCTCAGGTTCCTGTGCTTCGAGAGAAAGTAGAATACAGTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | ATATACGGCTGCTGCCTTGGCAGTGAGGACCGGCTCCAGGTGGGCTaGCGTCTAATTGGGGGTGGAGAATTTGACTGTTCAGTGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: IYGCCLGSEDRLQVG*RLIGGGEFDCSVQI Trigger: GATCTGCACTGAACAGTCAAATTCTCCACCCCCAATTAGACGCCAGCCCACCTGGAGCCGGTCCTCACTGCCAAGGCAGCAGCCGTATAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | TTATCATGCATTAGCTATCCGTCAGAGCAGTGTGGGGCTCCCTGGGAAGCCCTGGTGCACTCGATGACATaGCTGTCCAGCAGGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSCISYPSEQCGAPWEALVHSMT*LSSRRI Trigger: GATCCGCCTGCTGGACAGCAATGTCATCGAGTGCAC...CAGGGCTTCCCAGGGAGCCCCACACTGCTCTGACGGATAGCTAATGCATGATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GAGAGCCCATTCAGCGCTGCCAACATCAGCGGTCTCTTCTGTGCCTaGGGGCCCGTCATCTTCTGCTTCTCTAGATTCCTGATCATCATC | + |
|
Preference number: 5 (lower is better) Translates to: ESPFSAANISGLFCA*GPVIFCFSRFLIII Trigger: GATGATGATCAGGAATCTAGAGAAGCAGAAGATGACGGGCCCGCAGGCACAGAAGAGACCGCTGATGTTGGCAGCGCTGAATGGGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GTTGTTTTCTTTGGTCGGGATGAGCTCCACTCGATTCTCCTCGTATaGGACAACTTCTCGGATCCGGCTGCGCTCGGCATTCTCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVFFGRDELHSILLV*DNFSDPAALGILRQ Trigger: CTGCCTGAGAATGCCGAGCGCAGCCGGATCCGAGAAGTTGTCCCATACGAGGAGAATCGAGTGGAGCTCATCCCGACCAAAGAAAACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCAGCATCCAGGGGCACCTCCCAGCTTGACCAGATGCAAGGCCAGCACAGCCTCTCGGAGGAACTCTaGGGAATCAAACTGGTTATA | + |
|
Preference number: 5 (lower is better) Translates to: LSASRGTSQLDQMQGQHSLSEEL*GIKLVI Trigger: TATAACCAGTTTGATTCCCAAGAGTTCCTCCGAGAG...GCTGTGCTGGCCTTGCATCTGGTCAAGCTGGGAGGTGCCCCTGGATGCTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | CCTGGTCCTGATGCCTTCCAGCACGCTGTTGGTGTGGCGTCGGACTaGCTGGATTTCCTCCAAGTAGGACAAAAATCCTTGGACGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPDAFQHAVGVASD*LDFLQVGQKSLDVF Trigger: GAAGACGTCCAAGGATTTTTGTCCTACTTGGAGGAAATCCAGTCAGTCCGACGCCACACCAACAGCGTGCTGGAAGGCATCAGGACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GGTGTTGATGATATTGAGGTTACGCAGAGACCGGCTCTGGCTGTCTaGGTGCATCAGACCCCTCTTCATCTGCCTCATGACCGTCTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVDDIEVTQRPALAV*VHQTPLHLPHDRLV Trigger: TACGAGACGGTCATGAGGCAGATGAAGAGGGGTCTGATGCACGCAGACAGCCAGAGCCGGTCTCTGCGTAACCTCAATATCATCAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GCATGTGGGCTGTGCTATAGTGTTGTGCTCCTTGGAGCTGCATGTTaGCTAGTTCTGGAGTGCTCACTGTGTGTGAGATGGAACTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ACGLCYSVVLLGAAC*LVLECSLCVRWNWP Trigger: GGGCCAGTTCCATCTCACACACAGTGAGCACTCCAGAACTAGCCAACATGCAGCTCCAAGGAGCACAACACTATAGCACAGCCCACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | AGGGGGCAGGCAAGGAGCCCAGGAGAAGTAGCCCTCAAGGCTGGAGCACAGTCTCGTTGGCCTTTTTGTTaGGAATCTGCTCATATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGQARSPGEVALKAGAQSRWPFC*ESAHIL Trigger: CAGAATATGAGCAGATTCCAAACAAAAAGGCCAACG...AGACTGTGCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | CGGGGAAGATCTCCTGTCCAAATCCATCCAAACGCTCTACCTCGTTaGTGTACATCAGTTCAGCTTCAGCCGGCAGGATCCCGCTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRSPVQIHPNALPR*CTSVQLQPAGSRYE Trigger: CTCATAGCGGGATCCTGCCGGCTGAAGCTGAACTGATGTACATCAACGAGGTAGAGCGTTTGGATGGATTTGGACAGGAGATCTTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GGAAAATGCTGTCTTGGGAAGTATGGGTCTCCGAGTAGTGCTCACTaGACTGGACATGCATGGGAGGCAAGATATACGGCTGCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GKCCLGKYGSPSSAH*TGHAWEARYTAAAL Trigger: CAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGGAGACCCATACTTCCCAAGACAGCATTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | GAAAGAGGGAACAGTGCAAAGGAATACTGTCAAAAGTCGGCACCCTACACCTCACTGCACACGCTGCCATaGGTGACGGTGCCGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ERGNSAKEYCQKSAPYTSLHTLP*VTVPFK Trigger: CTTGAACGGCACCGTCACCAATGGCAGCGTGTGCAG...TGAGGTGTAGGGTGCCGACTTTTGACAGTATTCCTTTGCACTGTTCCCTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGTGCTTGGACCCCAGTTaGGGCCAGTATCGATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IHLGHSFPRSHPPSPEATCLDPS*GQYRWL Trigger: AAGCCATCGATACTGGCCCAAACTGGGGTCCAAGCA...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGCCTTGGAGCTGCATGTaGGCTAGTTCTGGAGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IHLGHSFPRSHPPSPEATPWSCM*ASSGVL Trigger: GAGCACTCCAGAACTAGCCAACATGCAGCTCCAAGG...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCCGGAGGCTAACACTGCAGATCAGTCAACGTGTGGTTCAAATGAGAAGTTCACAGGCTCTTTCTaGACCCGCTCCTTCACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPEANTADQSTCGSNEKFTGSF*TRSFTL Trigger: CAGCGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAA...CTTCTCATTTGAACCACACGTTGACTGATCTGCAGTGTTAGCCTCCGGGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | ATATCACTGCCTGTCTCCCGACCCTGTTCCTCACAAAAATCCCCATaGAGAAGATGCCGAGGTGCACGCTGTTGCCATGACTGTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLPVSRPCSSQKSP*RRCRGARCCHDCPS Trigger: TGAAGGACAGTCATGGCAACAGCGTGCACCTCGGCATCTTCTTCATGGGGATTTTTGTGAGGAACAGGGTCGGGAGACAGGCAGTGATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS-3UTR CAA 90 bp | ATAAGCAGGAAACTGGACTTCAAATCGAACACGGTCGATATCATCACTGACCCATATACGGCTGCTGCCTaGGCAGTGAGGACCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISRKLDFKSNTVDIITDPYTAAA*AVRTGS Trigger: GGAGCCGGTCCTCACTGCCAAGGCAGCAGCCGTATA...TGGGTCAGTGATGATATCGACCGTGTTCGATTTGAAGTCCAGTTTCCTGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | CATCATCTCTCTCTCTATAATGCTGTCCTCCAGGGAGAACATCTCTaGCACCGGCCTTTCCTTCACAGGCTCTTTCTTGACCCGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HHLSLYNAVLQGEHL*HRPFLHRLFLDPLL Trigger: AAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCCTGGAGGACAGCATTATAGAGAGAGAGATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGTGGGTGTTGATGATATaGAGGTTACGCAGAGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: IHLGHSFPRSHPPSPEATWVLMI*RLRRDR Trigger: CCGGTCTCTGCGTAACCTCAATATCATCAACACCCA...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 90 bp | GAAGAGCGCGGTCTCCTCCTTGTCAATCAGCTCCAACAGGATGGCTaGTTTGCTGTGAGTAACACTCCCAATGTCATTCCACCTGTATAT | + |
|
Preference number: 5 (lower is better) Translates to: EERGLLLVNQLQQDG*FAVSNTPNVIPPVY Trigger: ATATACAGGTGGAATGACATTGGGAGTGTTACTCACAGCAAAGCAGCCATCCTGTTGGAGCTGATTGACAAGGAGGAGACCGCGCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCCACCCTTAACACTGTAACATTTCCCCAAAATACCTATGTCAGAGTTTACTGCTCCCGAAGGGTGTaGCGGCGAGCCATGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPTLNTVTFPQNTYVRVYCSRRV*RRAMGI Trigger: TATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCA...GTAAACTCTGACATAGGTATTTTGGGGAAATGTTACAGTGTTAAGGGTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 90 bp | GTCTCCTCCTTGTCAATCAGCTCCAACAGGATGGCTGCTTTGCTGTaGGTAACACTCCCAATGTCATTCCACCTGTATATCACTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSSLSISSNRMAALL*VTLPMSFHLYITAC Trigger: ACAGGCAGTGATATACAGGTGGAATGACATTGGGAGTGTTACTCACAGCAAAGCAGCCATCCTGTTGGAGCTGATTGACAAGGAGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | ATTCATCTTGGACACTCATTTCCCAGATCCCATCCCCCATCCCCAGAAGCTACGGGCTCGTTAGCAAACTaGTCCAGATGTTTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IHLGHSFPRSHPPSPEATGSLAN*SRCFFS Trigger: ACTGAAGAAACATCTGGACAAGTTTGCTAACGAGCC...CGTAGCTTCTGGGGATGGGGGATGGGATCTGGGAAATGAGTGTCCAAGATGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGACAGTATCGATGGCTTTaGGTCCGTCCACCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGIWNVTEEPEAMVSENGQYRWL*VRPPSS Trigger: GGAGGAGGGTGGACGGACCAAAAGCCATCGATACTG...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAACGAGCCATGGGGATATaGAGTGACTTCAGTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKRAMGI*SDFSVM Trigger: CATGACACTGAAGTCACTCAATATCCCCATGGCTCG...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 90 bp | GTAAACAACCGAGAAATGTACTTGGCATTTTCAATATCATCTGTATaGAAGAGCGCGGTCTCCTCCTTGTCAATCAGCTCCAACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VNNREMYLAFSISSV*KSAVSSLSISSNRM Trigger: CATCCTGTTGGAGCTGATTGACAAGGAGGAGACCGCGCTCTTCCATACAGATGATATTGAAAATGCCAAGTACATTTCTCGGTTGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTTCTACCCCAAAGAGTTTGTGTCCCTAAAGGTAGAGGTTGGAGAAGAAAATTGGGGGTGGAGAATTaGACTGTTCAGTGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLPQRVCVPKGRGWRRKLGVEN*TVQCRS Trigger: AGATCTGCACTGAACAGTCAAATTCTCCACCCCCAA...TTTTCTTCTCCAACCTCTACCTTTAGGGACACAAACTCTTTGGGGTAGAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS-3UTR CAA 90 bp | AAAGGAATTTGGAATGTTACTGAAGAACCAGAAGCAATGGTGTCTGAGAATGGAAAACGCTCTACCTCGTaGATGTACATCAGTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGIWNVTEEPEAMVSENGKRSTS*MYISSA Trigger: AGCTGAACTGATGTACATCAACGAGGTAGAGCGTTT...TCCATTCTCAGACACCATTGCTTCTGGTTCTTCAGTAACATTCCAAATTCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | CCCCGACACTCGGGCCACCGAGAGCCCATTCAGCGCTaGCAACATCAGCGGTCTCTTCTGTGCCTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRHSGHREPIQR*QHQRSLLCLRA Trigger: GGCCCGCAGGCACAGAAGAGACCGCTGATGTTGGCAGCGCTGAATGGGCTCTCGGTGGCCCGAGTGTCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | TGCACTTCGTGGCCGCCCGTCTCCTCGGAAGGGCCCTaGTCCCGAAGGGTGTTGCGGCGAGCCATGGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CTSWPPVSSEGP*SRRVLRRAMGI Trigger: TATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCAGGGCCCTTCCGAGGAGACGGGCGGCCACGAAGTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | AGCCTCTCGTCTATGGGGACTCGGGTGGCATCATGGTaGCCGTCTTCCCGCCCCGACACTCGGGCCACCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSSMGTRVASW*PSSRPDTRATE Trigger: CTCGGTGGCCCGAGTGTCGGGGCGGGAAGACGGTCACCATGATGCCACCCGAGTCCCCATAGACGAGAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | GCACCTTCCGAGTTACCAGATCAGGGCTGCTGCCGCTaGCGTACTTGTGGCGGTGGCTGGCGAGGTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: APSELPDQGCCR*RTCGGGWRGLG Trigger: CCCCAGACCTCGCCAGCCACCGCCACAAGTACGTCAGCGGCAGCAGCCCTGATCTGGTAACTCGGAAGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CAA 90 bp | TCGTGGCCGCCCGTCTCCTCGGAAGGGCCCTGCTCCCGAAGGGTGTaGCGGCGAGCCATGGGGATATTGAGTGACTTCAGTGTCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWPPVSSEGPCSRRV*RRAMGILSDFSVMA Trigger: GGCCATGACACTGAAGTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCAGGGCCCTTCCGAGGAGACGGGCGGCCACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | TGGCGTTTATTCACCGTGCCACCGCCGCCGCCATGGTaGTTGGTGGCTGTAAGGGGTTCGCTCACCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WRLFTVPPPPPW*LVAVRGSLTSC Trigger: GCAGGAGGTGAGCGAACCCCTTACAGCCACCAAGCACCATGGCGGCGGCGGTGGCACGGTGAATAAACGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | GGTGGGGGCCTGTTGGGGATGCGGGCCAGGGCAGCCTaGAGCTGGGCACTGTATTCTACTTTCTCTCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGLLGMRARAA*SWALYSTFSRS Trigger: GCTTCGAGAGAAAGTAGAATACAGTGCCCAGCTGCAGGCTGCCCTGGCCCGCATCCCCAACAGGCCCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS CCA 72 bp | CTGTGGCGTTTATTCACCGTGCCACCGCCGCCGCCATaGTGCTTGGTGGCTGTAAGGGGTTCGCTCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LWRLFTVPPPPP*CLVAVRGSLTS Trigger: GGAGGTGAGCGAACCCCTTACAGCCACCAAGCACCATGGCGGCGGCGGTGGCACGGTGAATAAACGCCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS GCA 72 bp | CACTGGACATGCATGGGAGGCAAGATATACGGCTGCTaGCTTGGCAGTGAGGACCGGCTCCAGGTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HWTCMGGKIYGC*LGSEDRLQVGW Trigger: CCAGCCCACCTGGAGCCGGTCCTCACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | CTGCACTGGACATGCATGGGAGGCAAGATATACGGCTaGTGCCTTGGCAGTGAGGACCGGCTCCAGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHWTCMGGKIYG*CLGSEDRLQVG Trigger: GCCCACCTGGAGCCGGTCCTCACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | CAGTCCGTGTACTGCAAGTGCCACACGGTCCTCTCCTaGCCGGACAGCAGGTGCTTCACCTTTAGGCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QSVYCKCHTVLS*PDSRCFTFRPV Trigger: GACGGGCCTAAAGGTGAAGCACCTGCTGTCCGGGCAGGAGAGGACCGTGTGGCACTTGCAGTACACGGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CCA 72 bp | TGGATGGTCCGTGTCTCAGCACCCTGCACCTGGCCATaGCAGGAAGAGGGGTTCCCTGGTCCTGTCTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: WMVRVSAPCTWP*QEEGFPGPVSV Trigger: CACTGAGACAGGACCAGGGAACCCCTCTTCCTGCCATGGCCAGGTGCAGGGTGCTGAGACACGGACCATCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS CAA 72 bp | CCCGTCTCCTCGGAAGGGCCCTGCTCCCGAAGGGTGTaGCGGCGAGCCATGGGGATATTGAGTGACTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PVSSEGPCSRRV*RRAMGILSDFS Trigger: ACTGAAGTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGCAGGGCCCTTCCGAGGAGACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS CCA 72 bp | ATGCCTCTCACCATGCTGTTCATCACCTCCAGGCTGTaGCGTTTATTCACCGTGCCACCGCCGCCGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: MPLTMLFITSRL*RLFTVPPPPPW Trigger: CCATGGCGGCGGCGGTGGCACGGTGAATAAACGCCACAGCCTGGAGGTGATGAACAGCATGGTGAGAGGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS TCA 72 bp | GATGGCTTTTGGTCCGTCCACCCTCCTCCTCTGCAGTaGCCATGGCGATCACATTCACCCCCTGCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: DGFWSVHPPPLQ*PWRSHSPPAPT Trigger: TGTGGGAGCAGGGGGTGAATGTGATCGCCATGGTCACTGCAGAGGAGGAGGGTGGACGGACCAAAAGCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CAA 72 bp | CCCGTGCTTTCCACCGACAGCGTGCACTCGATGACATaGCTGTCCAGCAGGCGGATCCGGGTAACAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVLSTDSVHSMT*LSSRRIRVTKQ Trigger: CTGCTTTGTTACCCGGATCCGCCTGCTGGACAGCAATGTCATCGAGTGCACGCTGTCGGTGGAAAGCACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CAA 90 bp | CACTCTTGCCCCGTGCTTTCCACCGACAGCGTGCACTCGATGACATaGCTGTCCAGCAGGCGGATCCGGGTAACAAAGCAGTTCTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HSCPVLSTDSVHSMT*LSSRRIRVTKQFLL Trigger: GAGCAAGAACTGCTTTGTTACCCGGATCCGCCTGCTGGACAGCAATGTCATCGAGTGCACGCTGTCGGTGGAAAGCACGGGGCAAGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS TCA 72 bp | GGCTGCGCTCGGCATTCTCAGGCAGAGTGGCGGTGCTaGAGACGCCGTTGGCCTTTTTGTTTGGAATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCARHSQAEWRC*RRRWPFCLESA Trigger: AGCAGATTCCAAACAAAAAGGCCAACGGCGTCTTCAGCACCGCCACTCTGCCTGAGAATGCCGAGCGCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS TCA 72 bp | GCTCCCGAAGGGTGTTGCGGCGAGCCATGGGGATATTaGGTGACTTCAGTGTCATGGCCTCCATGCCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: APEGCCGEPWGY*VTSVSWPPCLS Trigger: TGAGAGGCATGGAGGCCATGACACTGAAGTCACTCAATATCCCCATGGCTCGCCGCAACACCCTTCGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS TCA 72 bp | ATCAGCATGGTGGCATCCGAGAATGTCTTCTTGTGGTaGTACTGGGGGAGACCGTGCACTTCGTGGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ISMVASENVFLW*YWGRPCTSWPP Trigger: GGGCGGCCACGAAGTGCACGGTCTCCCCCAGTATCACCACAAGAAGACATTCTCGGATGCCACCATGCTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | CGGACTTACAAGTTTGTGACCGTAGCACCCCTGGTGTaGATAGGGGACCGTGTAGGGATGCCTCTCCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RTYKFVTVAPLV*IGDRVGMPLPH Trigger: ATGCGGGAGAGGCATCCCTACACGGTCCCCTATGCACACCAGGGGTGCTACGGTCACAAACTTGTAAGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | CAGCCTCCAGGGTCTCCTCCTCTTCCTCGCTCTCACTaGTGTGGATCAGCATGGTGGCATCCGAGAATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPGSPPLPRSH*CGSAWWHPRMS Trigger: AGACATTCTCGGATGCCACCATGCTGATCCACAGCAGTGAGAGCGAGGAAGAGGAGGAGACCCTGGAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 72 bp | TGCTGCCTTGGCAGTGAGGACCGGCTCCAGGTGGGCTaGCGTCTAATTGGGGGTGGAGAATTTGACTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CCLGSEDRLQVG*RLIGGGEFDCS Trigger: TGAACAGTCAAATTCTCCACCCCCAATTAGACGCCAGCCCACCTGGAGCCGGTCCTCACTGCCAAGGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 72 bp | GGGTCTCCGAGTAGTGCTCACTGCACTGGACATGCATaGGAGGCAAGATATACGGCTGCTGCCTTGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSPSSAHCTGHA*EARYTAAALAV Trigger: CACTGCCAAGGCAGCAGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGGAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | TGCTTGGACCCCAGTTTGGGCCAGTATCGATGGCTTTaGGTCCGTCCACCCTCCTCCTCTGCAGTGACCATG | + |
|
Preference number: 6 (lower is better) Translates to: CLDPSLGQYRWL*VRPPSSSAVTM Trigger: CATGGTCACTGCAGAGGAGGAGGGTGGACGGACCAAAAGCCATCGATACTGGCCCAAACTGGGGTCCAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | TGTCTGCGTGCATCAGACCCCTCTTCATCTGCCTCATaGCCGTCTCGTAATCTGGGGTCGGCCTGTAAGACG | + |
|
Preference number: 6 (lower is better) Translates to: CLRASDPSSSAS*PSRNLGSACKT Trigger: CGTCTTACAGGCCGACCCCAGATTACGAGACGGTCATGAGGCAGATGAAGAGGGGTCTGATGCACGCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS TCA 72 bp | TCTCTGACACCGGCCTTTCCTTCACAGGCTCTTTCTTaGCCCGCTCCTTCACGCTGGTTAGGTCAGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLTPAFPSQALS*PAPSRWLGQAQ Trigger: CTGAGCCTGACCTAACCAGCGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | TTCAGCGCTGCCAACATCAGCGGTCTCTTCTGTGCCTaGGGGCCCGTCATCTTCTGCTTCTCTAGATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FSAANISGLFCA*GPVIFCFSRFL Trigger: CAGGAATCTAGAGAAGCAGAAGATGACGGGCCCGCAGGCACAGAAGAGACCGCTGATGTTGGCAGCGCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS CCA 72 bp | ACCCCTCTTCATCTGCCTCATGACCGTCTCGTAATCTaGGGTCGGCCTGTAAGACGGCACGATGATGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPLHLPHDRLVI*GRPVRRHDDGA Trigger: AGCACCATCATCGTGCCGTCTTACAGGCCGACCCCAGATTACGAGACGGTCATGAGGCAGATGAAGAGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CCA 72 bp | TTTGGTCGGGATGAGCTCCACTCGATTCTCCTCGTATaGGACAACTTCTCGGATCCGGCTGCGCTCGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: FGRDELHSILLV*DNFSDPAALGI Trigger: AATGCCGAGCGCAGCCGGATCCGAGAAGTTGTCCCATACGAGGAGAATCGAGTGGAGCTCATCCCGACCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CCA 72 bp | TGCCGTAGGTGGCAGAACTATGCTTGGACCCCAGTTTaGGCCAGTATCGATGGCTTTTGGTCCGTCCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRRWQNYAWTPV*ASIDGFWSVHP Trigger: AGGGTGGACGGACCAAAAGCCATCGATACTGGCCCAAACTGGGGTCCAAGCATAGTTCTGCCACCTACGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CCA 72 bp | ACCCTGCACCTGGCCATGGCAGGAAGAGGGGTTCCCTaGTCCTGTCTCAGTGCCCCATTACTGACACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TLHLAMAGRGVP*SCLSAPLLTLF Trigger: AAAAAGTGTCAGTAATGGGGCACTGAGACAGGACCAGGGAACCCCTCTTCCTGCCATGGCCAGGTGCAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS CAA 90 bp | AGGGAGAACATCTCTGACACCGGCCTTTCCTTCACAGGCTCTTTCTaGACCCGCTCCTTCACGCTGGTTAGGTCAGGCTCAGAGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RENISDTGLSFTGSF*TRSFTLVRSGSEME Trigger: CTCCATCTCTGAGCCTGACCTAACCAGCGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS TCA 72 bp | CCTGTCTCCCGACCCTGTTCCTCACAAAAATCCCCATaGAGAAGATGCCGAGGTGCACGCTGTTGCCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVSRPCSSQKSP*RRCRGARCCHD Trigger: GTCATGGCAACAGCGTGCACCTCGGCATCTTCTTCATGGGGATTTTTGTGAGGAACAGGGTCGGGAGACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | TTGTACTGCGCAATGGTCTGGATCATGAACATCCTCTaGTCCCTGAGGAATCGCAGCATCGTGGGCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYCAMVWIMNIL*SLRNRSIVGTS Trigger: GGAGGTGCCCACGATGCTGCGATTCCTCAGGGAGCAGAGGATGTTCATGATCCAGACCATTGCGCAGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | CATGGCAGGAAGAGGGGTTCCCTGGTCCTGTCTCAGTaGCCCATTACTGACACTTTTTCTTGGCCCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HGRKRGSLVLSQ*PITDTFSWPWV Trigger: TACCCAGGGCCAAGAAAAAGTGTCAGTAATGGGGCACTGAGACAGGACCAGGGAACCCCTCTTCCTGCCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS CAA 72 bp | ATCTCTGACACCGGCCTTTCCTTCACAGGCTCTTTCTaGACCCGCTCCTTCACGCTGGTTAGGTCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ISDTGLSFTGSF*TRSFTLVRSGS Trigger: TGAGCCTGACCTAACCAGCGTGAAGGAGCGGGTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
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| CDS TCA 72 bp | CCCATGAAGAAGATGCCGAGGTGCACGCTGTTGCCATaGCTGTCCTTCACGGGGAAGATCTCCTGTCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PMKKMPRCTLLP*LSFTGKISCPN Trigger: ATTTGGACAGGAGATCTTCCCCGTGAAGGACAGTCATGGCAACAGCGTGCACCTCGGCATCTTCTTCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | TTCAGCGCTGCCAACATCAGCGGTCTCTTCTGTGCCTaGGGGCCCGTCATCTTCTGCTTCTCTAGATTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FSAANISGLFCA*GPVIFCFSRLS Trigger: ACTTAATCTAGAGAAGCAGAAGATGACGGGCCCGCAGGCACAGAAGAGACCGCTGATGTTGGCAGCGCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027898.7 |
||
| CDS CCA 72 bp | GTGTTGATGATATTGAGGTTACGCAGAGACCGGCTCTaGCTGTCTGCGTGCATCAGACCCCTCTTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VLMILRLRRDRL*LSACIRPLFIC Trigger: GCAGATGAAGAGGGGTCTGATGCACGCAGACAGCCAGAGCCGGTCTCTGCGTAACCTCAATATCATCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CCA 72 bp | TTCCTCCAAGTAGGACAAAAATCCTTGGACGTCTTCTaGACAGCCGTGGTGGGGCCAGTCCGTGTACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLQVGQKSLDVF*TAVVGPVRVLQ Trigger: TTGCAGTACACGGACTGGCCCCACCACGGCTGTCCAGAAGACGTCCAAGGATTTTTGTCCTACTTGGAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS GCA 72 bp | TGTCTTGGGAAGTATGGGTCTCCGAGTAGTGCTCACTaGACTGGACATGCATGGGAGGCAAGATATACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLGKYGSPSSAH*TGHAWEARYTA Trigger: AGCCGTATATCTTGCCTCCCATGCATGTCCAGTGCAGTGAGCACTACTCGGAGACCCATACTTCCCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | AACGGCAGTACAAGGCTTCTTCGTTCCCGGGGAAAATaGTGTCTTGGGAAGTATGGGTCTCCGAGTAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NGSTRLLRSRGK*CLGKYGSPSSA Trigger: AGCACTACTCGGAGACCCATACTTCCCAAGACAGCATTTTCCCCGGGAACGAAGAAGCCTTGTACTGCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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| CDS CAA 90 bp | CTGCGCTCGGCATTCTCAGGCAGAGTGGCGGTGCTGAAGACGCCGTaGGCCTTTTTGTTTGGAATCTGCTCATATTCTGTGAACACCATT | + |
|
Preference number: 6 (lower is better) Translates to: LRSAFSGRVAVLKTP*AFLFGICSYSVNTI Trigger: AATGGTGTTCACAGAATATGAGCAGATTCCAAACAAAAAGGCCAACGGCGTCTTCAGCACCGCCACTCTGCCTGAGAATGCCGAGCGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | TCTCCTGTCCAAATCCATCCAAACGCTCTACCTCGTTaGTGTACATCAGTTCAGCTTCAGCCGGCAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SPVQIHPNALPR*CTSVQLQPAGS Trigger: GGATCCTGCCGGCTGAAGCTGAACTGATGTACATCAACGAGGTAGAGCGTTTGGATGGATTTGGACAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | GGAACTGGCCCCTGGCTTGATAGGCATCGCACAATTTaGGGGGTTCATCTGGTCAGACGGACTTACAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GTGPWLDRHRTI*GVHLVRRTYKF Trigger: AAACTTGTAAGTCCGTCTGACCAGATGAACCCCCAAAATTGTGCGATGCCTATCAAGCCAGGGGCCAGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | TCTCTCTATAATGCTGTCCTCCAGGGAGAACATCTCTaGCACCGGCCTTTCCTTCACAGGCTCTTTCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLYNAVLQGEHL*HRPFLHRLFLD Trigger: GTCAAGAAAGAGCCTGTGAAGGAAAGGCCGGTGTCAGAGATGTTCTCCCTGGAGGACAGCATTATAGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097442.9 |
||
| CDS GCA 72 bp | GGTCTCCTCCTTGTCAATCAGCTCCAACAGGATGGCTaGTTTGCTGTGAGTAACACTCCCAATGTCATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLLVNQLQQDG*FAVSNTPNVIP Trigger: TGGAATGACATTGGGAGTGTTACTCACAGCAAAGCAGCCATCCTGTTGGAGCTGATTGACAAGGAGGAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | ATCTCCTGTCCAAATCCATCCAAACGCTCTACCTCGTaGATGTACATCAGTTCAGCTTCAGCCGGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ISCPNPSKRSTS*MYISSASAGRI Trigger: GATCCTGCCGGCTGAAGCTGAACTGATGTACATCAACGAGGTAGAGCGTTTGGATGGATTTGGACAGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | TCAATATCATCTGTATGGAAGAGCGCGGTCTCCTCCTaGTCAATCAGCTCCAACAGGATGGCTGCTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SISSVWKSAVSS*SISSNRMAALL Trigger: CAGCAAAGCAGCCATCCTGTTGGAGCTGATTGACAAGGAGGAGACCGCGCTCTTCCATACAGATGATATTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | ATGACTCCGAAGAAAAGCAGAGGCTCGTTAGCAAACTaGTCCAGATGTTTCTTCAGTGGCTTCTCCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTPKKSRGSLAN*SRCFFSGFSSS Trigger: AGAGCTGGAGAAGCCACTGAAGAAACATCTGGACAAGTTTGCTAACGAGCCTCTGCTTTTCTTCGGAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS TCA 72 bp | GTAATACTGATATCTTGTGGCCTCCTGCTGAAGCCGTaGCACATTTGGCACATAGAACATGACTCCGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VILISCGLLLKP*HIWHIEHDSEE Trigger: TTCTTCGGAGTCATGTTCTATGTGCCAAATGTGTCACGGCTTCAGCAGGAGGCCACAAGATATCAGTATTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
||
| CDS CAA 72 bp | ATCCATAGGAAAGAGCACATACTCTCGGAGGAACTCTaGGGAATCAAACTGGTTATAATCTCCGAAGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IHRKEHILSEEL*GIKLVIISEVS Trigger: GCTGACTTCGGAGATTATAACCAGTTTGATTCCCAAGAGTTCCTCCGAGAGTATGTGCTCTTTCCTATGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027898.7 ENSMUST00000097442.9 |
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