Pregenerated sensors for PTPN12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028771Ensembl transcript IDs: ENSMUST00000030556.8, ENSMUST00000140057.2, ENSMUST00000151813.8, ENSMUST00000199774.5
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGTCTATGACTGTATTCGCCAAAGGCCCTTGGGTTGCCACATATaGTTTTGGCCCATACACACCCTTAATAAAATTTGCATTGATATA | + |
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Preference number: 1 (lower is better) Translates to: EVYDCIRQRPLGCHI*FWPIHTLNKICIDI Trigger: TATATCAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCGACAGGCCATCACGATGATCACAACATTATACTCCCATATCATCCTCCAAAGGCCCTTGGGTTaGCACATATGCTTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: NSRQAITMITTLYSHIILQRPLG*HICFWP Trigger: GGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTG...GAGGATGATATGGGAGTATAATGTTGTGATCATCGTGATGGCCTGTCGAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCAAATGTTATAGGATCTTCTCCATACAAAGGCCAGTAGCGCTCACACTTTTGGGTTGCCACATATaGTTTTGGCCCATACACACC | + |
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Preference number: 2 (lower is better) Translates to: WCKCYRIFSIQRPVALTLLGCHI*FWPIHT Trigger: GGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAA...AAGTGTGAGCGCTACTGGCCTTTGTATGGAGAAGATCCTATAACATTTGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140057.2 ENSMUST00000199774.5 |
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| 3UTR-3UTR CCA 90 bp | CATACTGCTCCTTTGTTTGTACTGCCGAGTGCCTCTGTGTTCTCATTTCTTGTATTCGCCAAAGGCCCTTaGGTTGCCACATATGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: HTAPLFVLPSASVFSFLVFAKGP*VATYAF Trigger: AAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAA...TACAAGAAATGAGAACACAGAGGCACTCGGCAGTACAAACAAAGGAGCAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151813.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCGACAGGCCATCACGATGATCACAACATTATACTCCCATATCATCCTCTTGGGTTGCCACATATaGTTTTGGCCCATACACACC | + |
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Preference number: 2 (lower is better) Translates to: NSRQAITMITTLYSHIILLGCHI*FWPIHT Trigger: GGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAA...GAGGATGATATGGGAGTATAATGTTGTGATCATCGTGATGGCCTGTCGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CCA 90 bp | AATTCTCGACAGGCCATCACGATGATCACAACATTATACTCCCATATCATCCTCTTCGCCAAAGGCCCTTaGGTTGCCACATATGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: NSRQAITMITTLYSHIILFAKGP*VATYAF Trigger: AAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAA...GAGGATGATATGGGAGTATAATGTTGTGATCATCGTGATGGCCTGTCGAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAAAGCCTGGCTTTCAGTaGCACTTGAGTGTTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SLITCNAGCMNPASLKFRKPGFQ*HLSVPV Trigger: TACTGGAACACTCAAGTGCCACTGAAAGCCAGGCTT...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCCAGTTCACGTAATGAAACTGATAGAGCCGACGGGATTCATTTTGAAATTCTGCCACATATGCTTTTaGCCCATACACACCCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: WPVHVMKLIEPTGFILKFCHICF*PIHTLN Trigger: ATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCA...GAATTTCAAAATGAATCCCGTCGGCTCTATCAGTTTCATTACGTGAACTGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACGCTTTCAGTGGCACTTaGGTGTTCCAGTATAATGTG | + |
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Preference number: 2 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYAFSGT*VFQYNV Trigger: CACATTATACTGGAACACTCAAGTGCCACTGAAAGC...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| 3UTR-3UTR TCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACTGTTCCAGTATAATGTaGAGTGTCCTTTCACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYCSSIM*SVLSLP Trigger: AGGGAGTGAAAGGACACTTCACATTATACTGGAACA...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCCAGTTCACGTAATGAAACTGATAGAGCCGACGGGATTCATTTTGAAATTCTGCATTGATATAATCTaGATCTTGGGATGGAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WPVHVMKLIEPTGFILKFCIDII*ILGWSL Trigger: AAGACTCCATCCCAAGATTCAGATTATATCAATGCA...GAATTTCAAAATGAATCCCGTCGGCTCTATCAGTTTCATTACGTGAACTGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CAA 90 bp | CGTGTAATCTATGGCACAAATAGCACCTGTTCGTCCACAGCCTGCACTGCAATGCCAAAGGCCCTTGGGTaGCCACATATGCTTTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RVIYGTNSTCSSTACTAMPKALG*PHMLLA Trigger: GGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGG...CATTGCAGTGCAGGCTGTGGACGAACAGGTGCTATTTGTGCCATAGATTACACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCCATCTCAAATTCTCGACAGGCCATCACGATGATCACAACATTATACTCCCAAAGGCCCTTGGGTaGCCACATATGCTTTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PSHLKFSTGHHDDHNIILPKALG*PHMLLA Trigger: GGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGG...GAGTATAATGTTGTGATCATCGTGATGGCCTGTCGAGAATTTGAGATGGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CAA 90 bp | AATTCTCGACAGGCCATCACGATGATCACAACATTATACTCCCATATCATCCTCCCAAAGGCCCTTGGGTaGCCACATATGCTTTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: NSRQAITMITTLYSHIILPKALG*PHMLLA Trigger: GGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGG...GAGGATGATATGGGAGTATAATGTTGTGATCATCGTGATGGCCTGTCGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CAA 90 bp | CATACTGCTCCTTTGTTTGTACTGCCGAGTGCCTCTGTGTTCTCATTTCTTGTAATTCGCCAAAGGCCCTaGGGTTGCCACATATGCTTT | + |
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Preference number: 3 (lower is better) Translates to: HTAPLFVLPSASVFSFLVIRQRP*GCHICF Trigger: AAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAAT...TACAAGAAATGAGAACACAGAGGCACTCGGCAGTACAAACAAAGGAGCAGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151813.8 |
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| 3UTR GCA 72 bp | GAAGTCTATGACTGTATTCGCCAAAGGCCCTTGGGTTaGCACATATGCTTTTGGCCCATACACACCCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: EVYDCIRQRPLG*HICFWPIHTLN Trigger: ATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAATACAGTCATAGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR GCA 72 bp | GACTGTATTCGCCAAAGGCCCTTGGGTTGCCACATATaGTTTTGGCCCATACACACCCTTAATAAAATTTGC | + |
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Preference number: 3 (lower is better) Translates to: DCIRQRPLGCHI*FWPIHTLNKIC Trigger: GCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAATACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR-3UTR CAA 90 bp | GTTCCACGTGTAATCTATGGCACAAATAGCACCTGTTCGTCCACAGCCTGCACTGTAGTCGGTTCTTGCTaGTTCATTTTCACAAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: VPRVIYGTNSTCSSTACTVVGSC*FIFTRN Trigger: ATTTCTTGTGAAAATGAACAAGCAAGAACCGACTAC...AGTGCAGGCTGTGGACGAACAGGTGCTATTTGTGCCATAGATTACACGTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199774.5 |
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| 3UTR CCA 72 bp | ATTCGCCAAAGGCCCTTGGGTTGCCACATATGCTTTTaGCCCATACACACCCTTAATAAAATTTGCATTGAT | + |
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Preference number: 3 (lower is better) Translates to: IRQRPLGCHICF*PIHTLNKICID Trigger: ATCAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| 3UTR TCA 72 bp | AGATGGAATACTATAAGCCTGGCTTTCAGTGGCACTTaGGTGTTCCAGTATAATGTGAAGTGTCCTTTCACT | + |
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Preference number: 3 (lower is better) Translates to: RWNTISLAFSGT*VFQYNVKCPFT Trigger: AGTGAAAGGACACTTCACATTATACTGGAACACTCAAGTGCCACTGAAAGCCAGGCTTATAGTATTCCATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| 3UTR TCA 72 bp | GTAATTTCATTACCATCAGCGATCTTCTGTGCTCCATaGATTTCATACAGTTGTAGCTGTTTTTCAAACAGT | + |
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Preference number: 3 (lower is better) Translates to: VISLPSAIFCAP*ISYSCSCFSNS Trigger: ACTGTTTGAAAAACAGCTACAACTGTATGAAATTCATGGAGCACAGAAGATCGCTGATGGTAATGAAATTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151813.8 |
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| 3UTR GCA 72 bp | ACAAGTTCATACTGCTCCTTTGTTTGTACTGCCGAGTaGCTCTGTGTTCTCATTTCTTGTATTAAATTAAAT | + |
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Preference number: 3 (lower is better) Translates to: TSSYCSFVCTAE*LCVLISCIKLN Trigger: ATTTAATTTAATACAAGAAATGAGAACACAGAGGCACTCGGCAGTACAAACAAAGGAGCAGTATGAACTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151813.8 |
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| 3UTR GCA 72 bp | TTATTATTACAATCTTTGATCTCTGATAACCTGCAATaGTGGCTGCATGAATCCAGCAAGTTTAAAATTCAG | + |
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Preference number: 3 (lower is better) Translates to: LLLQSLISDNLQ*WLHESSKFKIQ Trigger: CTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGATCAAAGATTGTAATAATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | CGCCAAAGGCCCTTGGGTTGCCACATATGCTTTTGGCCCATACACACCCTTAATCCTGGACCCTCTGGATaGACCTCCTCAGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RQRPLGCHICFWPIHTLNPGPSG*TSSGSP Trigger: TGGAGATCCTGAGGAGGTTCATCCAGAGGGTCCAGG...ATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS-3UTR CCA 90 bp | ATGACTGTATTCGCCAAAGGCCCTTGGGTTGCCACATATGCTTTTGGCCCATACGGACTCTTCATGGCCTaGACCCTCTGGATGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: MTVFAKGPWVATYAFGPYGLFMA*TLWMNL Trigger: GAGGTTCATCCAGAGGGTCCAGGCCATGAAGAGTCC...GTATGGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAATACAGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS-3UTR TCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGACCGTGGAGGTGTGTGTaGGTTGCTCTGGGACTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRPWRCV*VALGLL Trigger: GAGGAGTCCCAGAGCAACTCACACACACCTCCACGG...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCTCTGGTGAGGCCATGTaGAGCACTGGCTTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VDGPSKNIKVTIYTAISPSGEAM*STGFGW Trigger: CCACCCAAAGCCAGTGCTGCACATGGCCTCACCAGA...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR GCA 90 bp | CAATCTTTGATCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTCACCTGAATGCGGCGTaGCTGCTACTTCCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QSLISDNLQCWLHESSKFHLNAA*LLLPVW Trigger: CCAGACAGGAAGTAGCAGGCACGCCGCATTCAGGTG...AAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGATCAAAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | TGGGTTGCCACATATGCTTTTGGCCCATACACACCCTTAATAAAATTTGCATTGCCTGGACCCTCTGGATaGACCTCCTCAGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WVATYAFGPYTPLIKFALPGPSG*TSSGSP Trigger: TGGAGATCCTGAGGAGGTTCATCCAGAGGGTCCAGG...CAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS-3UTR GCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAGTGGGCTTCCTCTTCTaGGGTGGAGTTGGGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRVGFLF*GGVGCG Trigger: TCCACACCCAACTCCACCGCAGAAGAGGAAGCCCAC...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTCCTGGACCCTCTGGATaGACCTCCTCAGGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTPGPSG*TSSGSP Trigger: TGGAGATCCTGAGGAGGTTCATCCAGAGGGTCCAGG...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCCAAAGGCCCTTGGGTTaGCACATATGCTTTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VDGPSKNIKVTIYTAISPQRPLG*HICFWP Trigger: GGGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTG...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCAGCAGGTGGAGAGTCTaGAGAAGCCTCTGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: VDGPSKNIKVTIYTAISPSRWRV*RSLCVD Trigger: ATCCACACAGAGGCTTCTGCAGACTCTCCACCTGCT...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAATGGCCTGGACCCTCTaGATGAACCTCCTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRMAWTL*MNLLRI Trigger: GATCCTGAGGAGGTTCATCCAGAGGGTCCAGGCCAT...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAAGCACTGGCTTTGGGTaGTACCTGTCACTGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRSTGFG*YLSLSC Trigger: GCAGGACAGTGACAGGTACCACCCAAAGCCAGTGCT...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACGGCCATGTGCAGCACTaGCTTTGGGTGGTACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYGHVQH*LWVVPV Trigger: GACAGGTACCACCCAAAGCCAGTGCTGCACATGGCC...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTTTGTCCTCCCCATTGTaGTCCGGACTCTTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTLSSPL*SGLFMA Trigger: GGCCATGAAGAGTCCGGATCACAATGGGGAGGACAA...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | GGTTGCCACATATGCTTTTGGCCCATACACACCCTTAATAAAATTTGCATTGATTTGTCCTCCCCATTGTaGTCCGGACTCTTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: GCHICFWPIHTLNKICIDLSSPL*SGLFMA Trigger: GGCCATGAAGAGTCCGGATCACAATGGGGAGGACAA...ATCAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000140057.2 ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS-3UTR GCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCGAGGTGTGTGTGAGTTaGTCTGGGACTCCTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTIEVCVS*SGTPLT Trigger: CGTCAGAGGAGTCCCAGAGCAACTCACACACACCTC...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | GGTTGCCACATATGCTTTTGGCCCATACACACCCTTAATAAAATTTGCATTGATATGGCCTGGACCCTCTaGATGAACCTCCTCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: GCHICFWPIHTLNKICIDMAWTL*MNLLRI Trigger: GATCCTGAGGAGGTTCATCCAGAGGGTCCAGGCCAT...ATCAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS-3UTR CCA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGGACTCTTCATGGCCTaGACCCTCTGGATGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTGLFMA*TLWMNL Trigger: GAGGTTCATCCAGAGGGTCCAGGCCATGAAGAGTCC...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGTGCAGCACTGGCTTTaGGTGGTACCTGTCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTVQHWL*VVPVTV Trigger: GACAGTGACAGGTACCACCCAAAGCCAGTGCTGCAC...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAGTCACTGAAAGCAGGTaGAGAGTCTGCAGAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRVTESR*RVCRSL Trigger: GAGGCTTCTGCAGACTCTCCACCTGCTTTCAGTGAC...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | CAATCTTTGATCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTGCATTTTCAGGTCCATaGAGTGACCACGTTACGTGT | + |
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Preference number: 4 (lower is better) Translates to: QSLISDNLQCWLHESSKFAFSGP*SDHVTC Trigger: ACACGTAACGTGGTCACTTCATGGACCTGAAAATGC...AAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGATCAAAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR TCA 90 bp | GTCTACAAGCAGCTTGTAACAGGGTTAAGAGACATTAAGGCAATAATACTTGAAATCTTTCTCAGCACCTaGATGCGGCGTGCCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VYKQLVTGLRDIKAIILEIFLST*MRRACY Trigger: GTAGCAGGCACGCCGCATTCAGGTGCTGAGAAAGAT...TTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR GCA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCTTGGGTTGCCACATATaGTTTTGGCCCATACACACC | + |
|
Preference number: 4 (lower is better) Translates to: VDGPSKNIKVTIYTAISPLGCHI*FWPIHT Trigger: GGTGTGTATGGGCCAAAAGCATATGTGGCAACCCAA...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR GCA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCAAGCCTCTGTGTGGATaGCCCCTGCATCATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VDGPSKNIKVTIYTAISPKPLCG*PLHHVF Trigger: AAAAACATGATGCAGGGGGCATCCACACAGAGGCTT...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGATTCAGGTCCATGAAGTaGCCACGTTACGTGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRFRSMK*PRYVSF Trigger: AAAGGACACGTAACGTGGTCACTTCATGGACCTGAA...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGAGATCTTTCTTGTCACTaGAAGCAGGTGGAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRDLSCH*KQVESL Trigger: CAGACTCTCCACCTGCTTTCAGTGACAAGAAAGATC...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTCATTAAGCTTATCATGTCCAGAATAGAATCAAATGACGAAGGAACATCAATGGCCTGGACCCTCTaGATGAACCTCCTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLIKLIMSRIESNDEGTSMAWTL*MNLLRI Trigger: GATCCTGAGGAGGTTCATCCAGAGGGTCCAGGCCAT...TGATGTTCCTTCGTCATTTGATTCTATTCTGGACATGATAAGCTTAATGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
||
| CDS-3UTR CCA 90 bp | CAATCTTTGATCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTGTAGTATTTCTTCCTTaGCATCCCCTTCTACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLISDNLQCWLHESSKFVVFLP*HPLLQG Trigger: GCCTTGTAGAAGGGGATGCCAAGGAAGAAATACTAC...AAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGATCAAAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGACTGCTACTTCCTGTCTaGCAATGGACATCGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRLLLPV*QWTSAI Trigger: TATTGCCGATGTCCATTGCCAGACAGGAAGTAGCAG...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTGTTCAGACCACTCCTaGTTTGGAAGTTCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTICSDHS*FGSSCH Trigger: GTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACA...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR GCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACCTCCTTTGTTTGTACTaGCGAGTGCCTCTGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYLLCLY*RVPLCS Trigger: AGAACACAGAGGCACTCGGCAGTACAAACAAAGGAG...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACTTCGCCAAAGGCCCTTaGGTTGCCACATATGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYFAKGP*VATYAF Trigger: AAAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAA...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACTCCCATCAAAACTTTTaGGCCCTTCTTGGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSIRQVDGPSKNIKVTIYSHQNF*ALLGEG Trigger: TCCCTCTCCAAGAAGGGCCCAAAAGTTTTGATGGGA...GTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCGTTTGTACTGCCGAGTaGCTCTGTGTTCTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTIVCTAE*LCVLIS Trigger: AGAAATGAGAACACAGAGGCACTCGGCAGTACAAAC...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGATGCCACATATGCTTTTaGCCCATACACACCCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRCHICF*PIHTLN Trigger: ATTAAGGGTGTGTATGGGCCAAAAGCATATGTGGCA...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTGTGGCACTTGCTGTTaGAATGCTAGTTTTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTICGTCC*NASFVP Trigger: AGGAACAAAACTAGCATTTCAACAGCAAGTGCCACA...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACAAGCAGCTTGTAACAGGGTTAAGAGACATTAAGGCAATAATACTTGAATGTGTGGATGCCCCCTaGATCATGTTTTTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYKQLVTGLRDIKAIILECVDAP*IMFFIS Trigger: GGAAATGAAAAACATGATGCAGGGGGCATCCACACA...TTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTCGGCTGTGATCAAATaGCAGTATGTCCTTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTISAVIK*QYVLIS Trigger: AGATATAAGGACATACTGCCATTTGATCACAGCCGA...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTGCATTGATATAATCTaGATCTTGGGATGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCSIRQVDGPSKNIKVTICIDII*ILGWSL Trigger: AAGACTCCATCCCAAGATTCAGATTATATCAATGCA...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR TCA 90 bp | GTCTACAAGCAGCTTGTAACAGGGTTAAGAGACATTAAGGCAATAATACTTGAACAAAACCAATATCTGTaGCTTCTGCTGGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VYKQLVTGLRDIKAIILEQNQYL*LLLDFL Trigger: CAAAAAGTCCAGCAGAAGTCACAGATATTGGTTTTG...TTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGATACATTAAATTCCTCTaGAATTTTCCCTGCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLITCNAGCMNPASLKFRYIKFL*NFPCFQ Trigger: CTGAAAGCAGGGAAAATTCCAGAGGAATTTAATGTA...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACAAGCAGCTTGTAACAGGGTTAAGAGACATTAAGGCAATAATACTTGAAATCTGTGACTTCTGCTaGACTTTTTGTTATTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VYKQLVTGLRDIKAIILEICDFC*TFCYLI Trigger: GATCAAATAACAAAAAGTCCAGCAGAAGTCACAGAT...TTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS CCA 90 bp | GCTGGGTGTTGCTCTGGTGAGGCCATGTGCAGCACTGGCTTTGGGTaGTACCTGTCACTGTCCTGCCACACAGTGGTAACGGTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGCCSGEAMCSTGFG*YLSLSCHTVVTVGK Trigger: CTTCCCAACCGTTACCACTGTGTGGCAGGACAGTGACAGGTACCACCCAAAGCCAGTGCTGCACATGGCCTCACCAGAGCAACACCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS TCA 90 bp | CTTCTCAATCGCATGAAGTCCCGGGCGAAGTTGTCCTCCCCATTGTaGTCCGGACTCTTCATGGCCTGGACCCTCTGGATGAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLNRMKSRAKLSSPL*SGLFMAWTLWMNLL Trigger: GAGGAGGTTCATCCAGAGGGTCCAGGCCATGAAGAGTCCGGATCACAATGGGGAGGACAACTTCGCCCGGGACTTCATGCGATTGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 90 bp | ACAGCACCATCAGAGCTCCCTCCGTCTGAGTCCGAGTCGTCAGAGTaGAGAGGGTTGGTAAAGCTGAGGGGAGCTTTCAACAGAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TAPSELPPSESESSE*RGLVKLRGAFNRGE Trigger: CTCCCCTCTGTTGAAAGCTCCCCTCAGCTTTACCAACCCTCTTCACTCTGACGACTCGGACTCAGACGGAGGGAGCTCTGATGGTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 90 bp | GCTGTGATCAACATGAAGTCCCGGGCGAAGTTGTCCTCCCCATTGTaGTCCGGACTCTTCATGGCCTGGACCCTCTGGATGAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVINMKSRAKLSSPL*SGLFMAWTLWMNLL Trigger: GAGGAGGTTCATCCAGAGGGTCCAGGCCATGAAGAGTCCGGATCACAATGGGGAGGACAACTTCGCCCGGGACTTCATGTTGATCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000151813.8 ENSMUST00000199774.5 |
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| CDS CCA 90 bp | TGGGTGGCACCGGGTGAGGTTCTGGTGGCTGTAGTATTTCTTCCTTaGCATCCCCTTCTACAAGGCAACTTCGAGTCCGCGGTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: WVAPGEVLVAVVFLP*HPLLQGNFESAVAL Trigger: CAAAGCCACCGCGGACTCGAAGTTGCCTTGTAGAAGGGGATGCCAAGGAAGAAATACTACAGCCACCAGAACCTCACCCGGTGCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 90 bp | TCTTATCGAGAGGCAAGCAGTCTGGCCGTGGAGGTGTGTGTGAGTTaGTCTGGGACTCCTCTGACGACTCAGCAGCTCTGTGTGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: SYREASSLAVEVCVS*SGTPLTTQQLCVNE Trigger: CTCATTCACACAGAGCTGCTGAGTCGTCAGAGGAGTCCCAGAGCAACTCACACACACCTCCACGGCCAGACTGCTTGCCTCTCGATAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 90 bp | GGGTTGGTAAAGCTGAGGGGAGCTTTCAACAGAGGGGAGCTGTTGTaGTGCTCTGTAAGATCGTGGGCTTCCTCTTCTGCGGTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVKLRGAFNRGELL*CSVRSWASSSAVEL Trigger: CAACTCCACCGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAGCTTTACCAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 90 bp | TTGGTAAAGCTGAGGGGAGCTTTCAACAGAGGGGAGCTGTTGTGGTaGTCTGTAAGATCGTGGGCTTCCTCTTCTGCGGTGGAGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVKLRGAFNRGELLW*SVRSWASSSAVELG Trigger: ACCCAACTCCACCGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAGCTTTACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 90 bp | GGAGGCGACTCCTCACTAACATCAGCATCTTTCTCAGCACCTGAATaGGGCGTGCCTGCTACTTCCTGTCTGGCAATGGACATCGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGDSSLTSASFSAPE*GVPATSCLAMDIGN Trigger: ATTGCCGATGTCCATTGCCAGACAGGAAGTAGCAGGCACGCCGCATTCAGGTGCTGAGAAAGATGCTGATGTTAGTGAGGAGTCGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 90 bp | CTTGGCATCCCCTTCTACAAGGCAACTTCGAGTCCGCGGTGGCTTTaGCGGAGGAGAGTCTTGCTTCTCGCTATCAATGGAACTGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGIPFYKATSSPRWL*RRRVLLLAINGTDH Trigger: ATGGTCAGTTCCATTGATAGCGAGAAGCAAGACTCTCCTCCGCCAAAGCCACCGCGGACTCGAAGTTGCCTTGTAGAAGGGGATGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 90 bp | TTCTTCCTTGGCATCCCCTTCTACAAGGCAACTTCGAGTCCGCGGTaGCTTTGGCGGAGGAGAGTCTTGCTTCTCGCTATCAATGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FFLGIPFYKATSSPR*LWRRRVLLLAINGT Trigger: AGTTCCATTGATAGCGAGAAGCAAGACTCTCCTCCGCCAAAGCCACCGCGGACTCGAAGTTGCCTTGTAGAAGGGGATGCCAAGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 90 bp | TTGCCGTCAGGTGAGTCGGGTACAGGTGTGGCATTTTCAGGTCCATaGAGTGACCACGTTACGTGTCCTTTCTTATCGAGAGGCAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSGESGTGVAFSGP*SDHVTCPFLSRGKQ Trigger: CTGCTTGCCTCTCGATAAGAAAGGACACGTAACGTGGTCACTTCATGGACCTGAAAATGCCACACCTGTACCCGACTCACCTGACGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 90 bp | GAAAGCAGGTGGAGAGTCTGCAGAAGCCTCTGTGTGGATGCCCCCTaGATCATGTTTTTCATTTCCAGAGGTTGTCAAGCCTTCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: ESRWRVCRSLCVDAP*IMFFISRGCQAFRF Trigger: GAATCTGAAGGCTTGACAACCTCTGGAAATGAAAAACATGATGCAGGGGGCATCCACACAGAGGCTTCTGCAGACTCTCCACCTGCTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 90 bp | TTCTTGTCACTGAAAGCAGGTGGAGAGTCTGCAGAAGCCTCTGTGTaGATGCCCCCTGCATCATGTTTTTCATTTCCAGAGGTTGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSLKAGGESAEASV*MPPASCFSFPEVVK Trigger: CTTGACAACCTCTGGAAATGAAAAACATGATGCAGGGGGCATCCACACAGAGGCTTCTGCAGACTCTCCACCTGCTTTCAGTGACAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 90 bp | CCAGAGGTTGTCAAGCCTTCAGATTCCCTTTGTTCAGACCACTCCTaGTTTGGAAGTTCATGCCACTCAGGTCTTACAGGCATATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PEVVKPSDSLCSDHS*FGSSCHSGLTGISA Trigger: AGCAGATATGCCTGTAAGACCTGAGTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCTTGACAACCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 90 bp | TGCTGGACTTTTTGTTATTTGATCTTTCTTGTCACTGAAAGCAGGTaGAGAGTCTGCAGAAGCCTCTGTGTGGATGCCCCCTGCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: CWTFCYLIFLVTESR*RVCRSLCVDAPCIM Trigger: CATGATGCAGGGGGCATCCACACAGAGGCTTCTGCAGACTCTCCACCTGCTTTCAGTGACAAGAAAGATCAAATAACAAAAAGTCCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CAA 90 bp | GTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTGCTATCAGTCCCCCAAAGGCCCTTGGGTaGCCACATATGCTTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VDGPSKNIKVTIYTAISPPKALG*PHMLLA Trigger: GGCCAAAAGCATATGTGGCAACCCAAGGGCCTTTGG...GGGACTGATAGCAGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCGGAGGTGTGTGTGAGTaGCTCTGGGACTCCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KCSIRQVDGPSKNIKVTIGGVCE*LWDSSD Trigger: GTCAGAGGAGTCCCAGAGCAACTCACACACACCTCC...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGATAACCTGCAATGCTGGCTGCATGAATCCAGCAAGTTTAAAATTCAGATCTTCTGCGGTGGAGTaGGGTGTGGAACTCACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLITCNAGCMNPASLKFRSSAVE*GVELTV Trigger: AACCGTGAGTTCCACACCCAACTCCACCGCAGAAGA...TCTGAATTTTAAACTTGCTGGATTCATGCAGCCAGCATTGCAGGTTATCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CAA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTTGTGCAGCACTGGCTTaGGGTGGTACCTGTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTCAALA*GGTCHC Trigger: ACAGTGACAGGTACCACCCAAAGCCAGTGCTGCACA...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCATTCGCCAAAGGCCCTaGGGTTGCCACATATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KCSIRQVDGPSKNIKVTIIRQRP*GCHICF Trigger: AAAGCATATGTGGCAACCCAAGGGCCTTTGGCGAAT...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CAA 90 bp | AGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCTACACTTTCCCATCAAAACTTTaGGGCCCTTCTTGGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIRQVDGPSKNIKVTIYTFPSKL*GPSWRG Trigger: CCCTCTCCAAGAAGGGCCCAAAAGTTTTGATGGGAA...AGTGTAGATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CAA 90 bp | GTCTACAAGCAGCTTGTAACAGGGTTAAGAGACATTAAGGCAATAATACTTGAAGCCTTCAGATTCCCTTaGTTCAGACCACTCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: VYKQLVTGLRDIKAIILEAFRFP*FRPLLI Trigger: AATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGC...TTCAAGTATTATTGCCTTAATGTCTCTTAACCCTGTTACAAGCTGCTTGTAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCCTGTTTTTCAAACAGTaGAGCAATAGCCCTATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KCSIRQVDGPSKNIKVTILFFKQ*SNSPMN Trigger: GTTCATAGGGCTATTGCTCAACTGTTTGAAAAACAG...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
||
| CDS TCA 90 bp | TTTTGGCCCATACACACCCTTAATAAAATTTGCATTGATATAATCTaGATCTTGGGATGGAGTCTTCAAAGTCAACTTAACTCGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FWPIHTLNKICIDII*ILGWSLQSQLNSAV Trigger: CACAGCCGAGTTAAGTTGACTTTGAAGACTCCATCCCAAGATTCAGATTATATCAATGCAAATTTTATTAAGGGTGTGTATGGGCCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTAGTATAAGGCAGGTAGATGGTCCCAGCAAAAACATTAAGGTAACAATCGTAGTCGGTTCTTGCTaGTTCATTTTCACAAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: KCSIRQVDGPSKNIKVTIVVGSC*FIFTRN Trigger: ATTTCTTGTGAAAATGAACAAGCAAGAACCGACTAC...GATTGTTACCTTAATGTTTTTGCTGGGACCATCTACCTGCCTTATACTACACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | GAGGCAAGCAGTCTGGCCGTGGAGGTGTGTGTGAGTTaGTCTGGGACTCCTCTGACGACTCAGCAGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: EASSLAVEVCVS*SGTPLTTQQLC Trigger: ACAGAGCTGCTGAGTCGTCAGAGGAGTCCCAGAGCAACTCACACACACCTCCACGGCCAGACTGCTTGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | GGTGTTGCTCTGGTGAGGCCATGTGCAGCACTGGCTTaGGGTGGTACCTGTCACTGTCCTGCCACACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: GVALVRPCAALA*GGTCHCPATQW Trigger: CCACTGTGTGGCAGGACAGTGACAGGTACCACCCAAAGCCAGTGCTGCACATGGCCTCACCAGAGCAACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | GGCATCCCCTTCTACAAGGCAACTTCGAGTCCGCGGTaGCTTTGGCGGAGGAGAGTCTTGCTTCTCGCTATC | + |
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Preference number: 6 (lower is better) Translates to: GIPFYKATSSPR*LWRRRVLLLAI Trigger: GATAGCGAGAAGCAAGACTCTCCTCCGCCAAAGCCACCGCGGACTCGAAGTTGCCTTGTAGAAGGGGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | TGCTCTGGTGAGGCCATGTGCAGCACTGGCTTTGGGTaGTACCTGTCACTGTCCTGCCACACAGTGGTAACG | + |
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Preference number: 6 (lower is better) Translates to: CSGEAMCSTGFG*YLSLSCHTVVT Trigger: CGTTACCACTGTGTGGCAGGACAGTGACAGGTACCACCCAAAGCCAGTGCTGCACATGGCCTCACCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | GAAGGAGGTGATGGCGTCAGGATGGGTGGCACCGGGTaGGGTTCTGGTGGCTGTAGTATTTCTTCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: EGGDGVRMGGTG*GSGGCSISSLA Trigger: TGCCAAGGAAGAAATACTACAGCCACCAGAACCTCACCCGGTGCCACCCATCCTGACGCCATCACCTCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | CTGAGGGGAGCTTTCAACAGAGGGGAGCTGTTGTGGTaGTCTGTAAGATCGTGGGCTTCCTCTTCTGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRGAFNRGELLW*SVRSWASSSAV Trigger: CACCGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | AAGCAGTCTGGCCGTGGAGGTGTGTGTGAGTTGCTCTaGGACTCCTCTGACGACTCAGCAGCTCTGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: KQSGRGGVCELL*DSSDDSAALCE Trigger: TTCACACAGAGCTGCTGAGTCGTCAGAGGAGTCCCAGAGCAACTCACACACACCTCCACGGCCAGACTGCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 90 bp | AGAGGGTTGGTAAAGCTGAGGGGAGCTTTCAACAGAGGGGAGCTGTaGTGGTGCTCTGTAAGATCGTGGGCTTCCTCTTCTGCGGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGLVKLRGAFNRGEL*WCSVRSWASSSAVE Trigger: CTCCACCGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAGCTTTACCAACCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | CCGGGTGAGGTTCTGGTGGCTGTAGTATTTCTTCCTTaGCATCCCCTTCTACAAGGCAACTTCGAGTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PGEVLVAVVFLP*HPLLQGNFESA Trigger: CGCGGACTCGAAGTTGCCTTGTAGAAGGGGATGCCAAGGAAGAAATACTACAGCCACCAGAACCTCACCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | AAGCTGAGGGGAGCTTTCAACAGAGGGGAGCTGTTGTaGTGCTCTGTAAGATCGTGGGCTTCCTCTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: KLRGAFNRGELL*CSVRSWASSSA Trigger: CGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | TCCCCATTGGGTCCGCTGATTTATCATAGCTTCTGTTaGGGTCGGCTGGGTGTTGCTCTGGTGAGGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: SPLGPLIYHSFC*GRLGVALVRPC Trigger: ACATGGCCTCACCAGAGCAACACCCAGCCGACCTCAACAGAAGCTATGATAAATCAGCGGACCCAATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | GTTGTGGTGCTCTGTAAGATCGTGGGCTTCCTCTTCTaGGGTGGAGTTGGGTGTGGAACTCACGGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: VVVLCKIVGFLF*GGVGCGTHGFQ Trigger: CTGAAAACCGTGAGTTCCACACCCAACTCCACCGCAGAAGAGGAAGCCCACGATCTTACAGAGCACCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | CGACTCCTCACTAACATCAGCATCTTTCTCAGCACCTaGATGCGGCGTGCCTGCTACTTCCTGTCTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RLLTNISIFLST*MRRACYFLSGN Trigger: ATTGCCAGACAGGAAGTAGCAGGCACGCCGCATTCAGGTGCTGAGAAAGATGCTGATGTTAGTGAGGAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | TCCTCACTAACATCAGCATCTTTCTCAGCACCTGAATaGGGCGTGCCTGCTACTTCCTGTCTGGCAATGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSLTSASFSAPE*GVPATSCLAMD Trigger: GTCCATTGCCAGACAGGAAGTAGCAGGCACGCCGCATTCAGGTGCTGAGAAAGATGCTGATGTTAGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | GTAAAGCTGAGGGGAGCTTTCAACAGAGGGGAGCTGTaGTGGTGCTCTGTAAGATCGTGGGCTTCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: VKLRGAFNRGEL*WCSVRSWASSS Trigger: AGAAGAGGAAGCCCACGATCTTACAGAGCACCACAACAGCTCCCCTCTGTTGAAAGCTCCCCTCAGCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | TGGAGAGTCTGCAGAAGCCTCTGTGTGGATGCCCCCTaGATCATGTTTTTCATTTCCAGAGGTTGTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: WRVCRSLCVDAP*IMFFISRGCQA Trigger: GGCTTGACAACCTCTGGAAATGAAAAACATGATGCAGGGGGCATCCACACAGAGGCTTCTGCAGACTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | CTGAAAGCAGGTGGAGAGTCTGCAGAAGCCTCTGTGTaGATGCCCCCTGCATCATGTTTTTCATTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LKAGGESAEASV*MPPASCFSFPE Trigger: CTCTGGAAATGAAAAACATGATGCAGGGGGCATCCACACAGAGGCTTCTGCAGACTCTCCACCTGCTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | GGTGAGTCGGGTACAGGTGTGGCATTTTCAGGTCCATaGAGTGACCACGTTACGTGTCCTTTCTTATCGAGA | + |
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Preference number: 6 (lower is better) Translates to: GESGTGVAFSGP*SDHVTCPFLSR Trigger: TCTCGATAAGAAAGGACACGTAACGTGGTCACTTCATGGACCTGAAAATGCCACACCTGTACCCGACTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | AGTCTGAGAATGATTATCTGGGGATTTGCCGTCAGGTaGGTCGGGTACAGGTGTGGCATTTTCAGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: SLRMIIWGFAVR*VGYRCGIFRSM Trigger: CATGGACCTGAAAATGCCACACCTGTACCCGACTCACCTGACGGCAAATCCCCAGATAATCATTCTCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | GATCGTGGGCTTCCTCTTCTGCGGTGGAGTTGGGTGTaGAACTCACGGTTTTCAGAGTCTGAGAATGATTAT | + |
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Preference number: 6 (lower is better) Translates to: DRGLPLLRWSWV*NSRFSESENDY Trigger: ATAATCATTCTCAGACTCTGAAAACCGTGAGTTCCACACCCAACTCCACCGCAGAAGAGGAAGCCCACGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | GTCAAGCCTTCAGATTCCCTTTGTTCAGACCACTCCTaGTTTGGAAGTTCATGCCACTCAGGTCTTACAGGC | + |
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Preference number: 6 (lower is better) Translates to: VKPSDSLCSDHS*FGSSCHSGLTG Trigger: GCCTGTAAGACCTGAGTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS GCA 72 bp | CGGTTTTCAGAGTCTGAGAATGATTATCTGGGGATTTaGCGTCAGGTGAGTCGGGTACAGGTGTGGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: RFSESENDYLGI*RQVSRVQVWHF Trigger: AAAATGCCACACCTGTACCCGACTCACCTGACGGCAAATCCCCAGATAATCATTCTCAGACTCTGAAAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 90 bp | CCTCTGTGTGGATGCCCCCTGCATCATGTTTTTCATTTCCAGAGGTaGTCAAGCCTTCAGATTCCCTTTGTTCAGACCACTCCTGATTTG | + |
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Preference number: 6 (lower is better) Translates to: PLCGCPLHHVFHFQR*SSLQIPFVQTTPDL Trigger: CAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCTTGACAACCTCTGGAAATGAAAAACATGATGCAGGGGGCATCCACACAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CCA 72 bp | GCCTTCAGATTCCCTTTGTTCAGACCACTCCTGATTTaGAAGTTCATGCCACTCAGGTCTTACAGGCATATC | + |
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Preference number: 6 (lower is better) Translates to: AFRFPLFRPLLI*KFMPLRSYRHI Trigger: GATATGCCTGTAAGACCTGAGTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | GGATGCCCCCTGCATCATGTTTTTCATTTCCAGAGGTaGTCAAGCCTTCAGATTCCCTTTGTTCAGACCACT | + |
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Preference number: 6 (lower is better) Translates to: GCPLHHVFHFQR*SSLQIPFVQTT Trigger: AGTGGTCTGAACAAAGGGAATCTGAAGGCTTGACAACCTCTGGAAATGAAAAACATGATGCAGGGGGCATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | AGCCTTCAGATTCCCTTTGTTCAGACCACTCCTGATTaGGAAGTTCATGCCACTCAGGTCTTACAGGCATAT | + |
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Preference number: 6 (lower is better) Translates to: SLQIPFVQTTPD*EVHATQVLQAY Trigger: ATATGCCTGTAAGACCTGAGTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS TCA 72 bp | CTGCTGGACTTTTTGTTATTTGATCTTTCTTGTCACTaGAAGCAGGTGGAGAGTCTGCAGAAGCCTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLDFLLFDLSCH*KQVESLQKPLC Trigger: ACACAGAGGCTTCTGCAGACTCTCCACCTGCTTTCAGTGACAAGAAAGATCAAATAACAAAAAGTCCAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | TGTCCCCTATTCAAGAGTGTGTTCCCATCAAAACTTTaGGGCCCTTCTTGGAGAGGGACTTTCTTAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: CPLFKSVFPSKL*GPSWRGTFLIS Trigger: TGAGATTAAGAAAGTCCCTCTCCAAGAAGGGCCCAAAAGTTTTGATGGGAACACACTCTTGAATAGGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 72 bp | TTCATTTCCAGAGGTTGTCAAGCCTTCAGATTCCCTTaGTTCAGACCACTCCTGATTTGGAAGTTCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: FISRGCQAFRFP*FRPLLIWKFMP Trigger: TGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCTTGACAACCTCTGGAAATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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| CDS CAA 90 bp | ATCATGTTTTTCATTTCCAGAGGTTGTCAAGCCTTCAGATTCCCTTaGTTCAGACCACTCCTGATTTGGAAGTTCATGCCACTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IMFFISRGCQAFRFP*FRPLLIWKFMPLRS Trigger: AGACCTGAGTGGCATGAACTTCCAAATCAGGAGTGGTCTGAACAAAGGGAATCTGAAGGCTTGACAACCTCTGGAAATGAAAAACATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030556.8 |
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